ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4o19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596589.1| Saccharum officinarum clone SCCCRZ2C04A09, comple... 76 1e-10
2gb|AY107837.1| Zea mays PCO093632 mRNA sequence 76 1e-10
3gb|AF417575.1|AF417575 Euphorbia esula growth-on protein GRO11 (... 52 0.002
4dbj|AK065172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
5dbj|AK064963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
6dbj|AK062118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
7ref|XM_468462.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
8gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
9gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
10gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete se... 46 0.12
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12dbj|AK122065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
14ref|XM_522582.1| PREDICTED: Pan troglodytes similar to phosphati... 42 1.9
15gb|DQ311222.1| Bombyx mori presenilin-like signal peptide peptid... 42 1.9
16dbj|AB179084.1| Macaca fascicularis testis cDNA clone: QtsA-1264... 42 1.9
17gb|AF334585.1|AF334585 Homo sapiens NIR3 mRNA, complete cds 42 1.9
18gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 o... 42 1.9
19gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Ca... 42 1.9
20dbj|AK099361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
21dbj|AB040890.2| Homo sapiens mRNA for KIAA1457 protein, partial cds 42 1.9
22ref|NM_020845.2| Homo sapiens phosphatidylinositol transfer prot... 42 1.9
23ref|NM_121506.2| Arabidopsis thaliana unknown protein AT5G15020 ... 40 7.5
24ref|XM_362719.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.5
25gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosom... 40 7.5
26gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.5
27ref|XM_752783.1| Ustilago maydis 521 hypothetical protein (UM017... 40 7.5
28gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, comple... 40 7.5
29emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 40 7.5
30emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.5
31gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome ... 40 7.5
32gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell ... 40 7.5
33gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell ... 40 7.5
34gb|AC090526.3|AC090526 Homo sapiens chromosome 15 clone RP11-208... 40 7.5
35dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.5
36gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, compl... 40 7.5
37gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 40 7.5
38gb|AC002996.1|AC002996 Homo sapiens 12q24 BAC RPCI11-162P23 (Ros... 40 7.5
39emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC... 40 7.5 
>gb|AY596589.1| Saccharum officinarum clone SCCCRZ2C04A09, complete sequence
          Length = 2194

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Minus

                                                                       
Query: 174 gcgctgaacctgatggacgggcacgggcagcccgcgctgctctacatcgtgcctttcacc 233
           ||||||||||||||||| || || || || || || || || ||||||||||| ||||| 
Sbjct: 464 gcgctgaacctgatggatggacatggccaacctgcccttctgtacatcgtgcccttcact 405

                                                                 
Query: 234 ctgggcacgctgatctcgctggggtggaagaggggggagctgcggaacctgtgg 287
           || |||||  ||||| |||| || |||||||| |||||||||| ||||||||||
Sbjct: 404 cttggcaccttgatcacgcttggttggaagagaggggagctgccgaacctgtgg 351



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 12  tggggtgggtacagcatcattggctttggggacatcctccttcc 55
           |||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 626 tggggtggatacagcatcattggctttggtgatatccttcttcc 583
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>gb|AY107837.1| Zea mays PCO093632 mRNA sequence
          Length = 1192

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 174 gcgctgaacctgatggacgggcacgggcagcccgcgctgctctacatcgtgcctttcacc 233
           ||||||||||||||||| ||||| || || || || ||  | ||||||||||| ||||| 
Sbjct: 756 gcgctgaacctgatggatgggcatggacaacctgcccttttgtacatcgtgcccttcact 815

                                                                 
Query: 234 ctgggcacgctgatctcgctggggtggaagaggggggagctgcggaacctgtgg 287
           || |||||  ||||| |||| || |||||||| |||||||||| ||||||||||
Sbjct: 816 cttggcaccttgatcgcgcttggatggaagagaggggagctgcagaacctgtgg 869



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 12  tggggtgggtacagcatcattggctttggggacatcctccttcc 55
           |||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 594 tggggtggatacagcatcattggctttggtgatatccttcttcc 637
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>gb|AF417575.1|AF417575 Euphorbia esula growth-on protein GRO11 (Gro11) mRNA, complete cds
          Length = 1904

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 180  aacctgatggacgggcacgggcagcccgcgctgctctacatcgtgcctttcaccctgggc 239
            ||||| ||||| |||||||| || || || ||||||||||| || |||||||| ||||||
Sbjct: 1490 aacctaatggatgggcacggccaacctgcactgctctacattgttcctttcactctgggc 1549

              
Query: 240  ac 241
            ||
Sbjct: 1550 ac 1551
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>dbj|AK065172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C21, full
            insert sequence
          Length = 1845

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            ||||| || |||||||||||||| || || |||||||| || || |||||  | ||||| 
Sbjct: 1345 tggggaggatacagcatcattggattcggtgacatccttctacctgggctgttagttgca 1404

                                            
Query: 72   tttgctctgaggtatgattgggctgcgaagaa 103
            |||||  | || |||||||||||||| |||||
Sbjct: 1405 tttgcattaagatatgattgggctgccaagaa 1436
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>dbj|AK064963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A18, full
            insert sequence
          Length = 2012

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            ||||| || |||||||||||||| || || |||||||| || || |||||  | ||||| 
Sbjct: 1399 tggggaggatacagcatcattggattcggtgacatccttctacctgggctgttagttgca 1458

                                            
Query: 72   tttgctctgaggtatgattgggctgcgaagaa 103
            |||||  | || |||||||||||||| |||||
Sbjct: 1459 tttgcattaagatatgattgggctgccaagaa 1490
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>dbj|AK062118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C08, full
            insert sequence
          Length = 1908

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            ||||| || |||||||||||||| || || |||||||| || || |||||  | ||||| 
Sbjct: 1295 tggggaggatacagcatcattggattcggtgacatccttctacctgggctgttagttgca 1354

                                            
Query: 72   tttgctctgaggtatgattgggctgcgaagaa 103
            |||||  | || |||||||||||||| |||||
Sbjct: 1355 tttgcattaagatatgattgggctgccaagaa 1386
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>ref|XM_468462.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2058

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            |||||||| | ||| |||||||||||||| || || || ||||| |||||  |  |||| 
Sbjct: 1386 tggggtggattcagtatcattggctttggtgatatacttcttcctgggctgttgattgct 1445

                                                                        
Query: 72   tttgctctgaggtatgattgggctgcgaagaagagcatgcggtccggttacttcctgtgg 131
            |||||  | ||||||||||||||||| || |||| | |||  || ||||||||  |||||
Sbjct: 1446 tttgcattaaggtatgattgggctgccaaaaagaccttgcaatctggttactttttgtgg 1505

               
Query: 132  tca 134
            |||
Sbjct: 1506 tca 1508
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>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0019E05, complete sequence
          Length = 129021

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 354   gctgacgatgaggatggtgaggaggcc 380
             |||| ||||||||||||||||||||||
Sbjct: 14658 gctgtcgatgaggatggtgaggaggcc 14684
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>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0066C04, complete sequence
          Length = 133944

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 354   gctgacgatgaggatggtgaggaggcc 380
             |||| ||||||||||||||||||||||
Sbjct: 83485 gctgtcgatgaggatggtgaggaggcc 83511
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>gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete sequence
          Length = 147669

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 12    tggggtgggtacagcatcattggctttggggacat 46
             |||||||| |||||||||||||| || ||||||||
Sbjct: 77596 tggggtggttacagcatcattggtttcggggacat 77630
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 354      gctgacgatgaggatggtgaggaggcc 380
                |||| ||||||||||||||||||||||
Sbjct: 17144829 gctgtcgatgaggatggtgaggaggcc 17144855



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 354      gctgacgatgaggatggtgaggaggcc 380
                |||| ||||||||||||||||||||||
Sbjct: 11664241 gctgtcgatgaggatggtgaggaggcc 11664215
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>dbj|AK122065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115L18, full
            insert sequence
          Length = 2058

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            |||||||| | ||| |||||||||||||| || || || ||||| |||||  |  |||| 
Sbjct: 1386 tggggtggattcagtatcattggctttggtgatatacttcttcctgggctgttgattgct 1445

                                                                        
Query: 72   tttgctctgaggtatgattgggctgcgaagaagagcatgcggtccggttacttcctgtgg 131
            |||||  | ||||||||||||||||| || |||| | |||  || ||||||||  |||||
Sbjct: 1446 tttgcattaaggtatgattgggctgccaaaaagaccttgcaatctggttactttttgtgg 1505

               
Query: 132  tca 134
            |||
Sbjct: 1506 tca 1508
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 354      gctgacgatgaggatggtgaggaggcc 380
                |||| ||||||||||||||||||||||
Sbjct: 17240015 gctgtcgatgaggatggtgaggaggcc 17240041



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 354      gctgacgatgaggatggtgaggaggcc 380
                |||| ||||||||||||||||||||||
Sbjct: 11743430 gctgtcgatgaggatggtgaggaggcc 11743404
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>ref|XM_522582.1| PREDICTED: Pan troglodytes similar to phosphatidylinositol transfer
           protein, membrane-associated 2; PYK2 N-terminal
           domain-interacting receptor 3; retinal degeneration B
           alpha 2 (Drosophila) (LOC467183), mRNA
          Length = 1053

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 atgaggatggtgaggaggcca 381
           |||||||||||||||||||||
Sbjct: 359 atgaggatggtgaggaggcca 379
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>gb|DQ311222.1| Bombyx mori presenilin-like signal peptide peptidase mRNA, complete
            cds
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 194  gcacgggcagcccgcgctgctctacatcgtgcc 226
            ||||| ||||||||||||||| ||| |||||||
Sbjct: 1001 gcacgcgcagcccgcgctgctgtacctcgtgcc 1033
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>dbj|AB179084.1| Macaca fascicularis testis cDNA clone: QtsA-12645, similar to human
            phosphatidylinositol transfer protein,membrane-associated
            2 (PITPNM2), mRNA, RefSeq: NM_020845.1
          Length = 1835

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  atgaggatggtgaggaggcca 381
            |||||||||||||||||||||
Sbjct: 1019 atgaggatggtgaggaggcca 1039
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>gb|AF334585.1|AF334585 Homo sapiens NIR3 mRNA, complete cds
          Length = 5000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 atgaggatggtgaggaggcca 381
           |||||||||||||||||||||
Sbjct: 860 atgaggatggtgaggaggcca 880
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>gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 of the complete
            genome
          Length = 12469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 321  cagggctacgtgcagatggcc 341
            |||||||||||||||||||||
Sbjct: 4290 cagggctacgtgcagatggcc 4270
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>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163077

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 361   atgaggatggtgaggaggcca 381
             |||||||||||||||||||||
Sbjct: 77786 atgaggatggtgaggaggcca 77766
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>dbj|AK099361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M07, full
            insert sequence
          Length = 1943

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                        
Query: 12   tggggtgggtacagcatcattggctttggggacatcctccttcccgggctcgtcgttgcg 71
            ||||| || |||||||||||||| || || |||||||| || || |||||  | ||||| 
Sbjct: 1348 tggggaggatacagcatcattggattcggtgacatccttctacctgggctgttagttgca 1407

                                     
Query: 72   tttgctctgaggtatgattgggctg 96
            |||||  | || |||||||||||||
Sbjct: 1408 tttgcattaagatatgattgggctg 1432
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>dbj|AB040890.2| Homo sapiens mRNA for KIAA1457 protein, partial cds
          Length = 6799

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  atgaggatggtgaggaggcca 381
            |||||||||||||||||||||
Sbjct: 1003 atgaggatggtgaggaggcca 1023
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>ref|NM_020845.2| Homo sapiens phosphatidylinositol transfer protein,
           membrane-associated 2 (PITPNM2), mRNA
          Length = 6754

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 atgaggatggtgaggaggcca 381
           |||||||||||||||||||||
Sbjct: 921 atgaggatggtgaggaggcca 941
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>ref|NM_121506.2| Arabidopsis thaliana unknown protein AT5G15020 mRNA, complete cds
          Length = 4404

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gctgacgatgaggatggtga 373
            ||||||||||||||||||||
Sbjct: 3028 gctgacgatgaggatggtga 3047
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>ref|XM_362719.1| Magnaporthe grisea 70-15 hypothetical protein (MG08329.4) partial
           mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 gacgatgaggatggtgagga 376
           ||||||||||||||||||||
Sbjct: 679 gacgatgaggatggtgagga 698
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>gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosome 3, complete sequence
          Length = 138218

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tacagcatcattggctttgg 40
             ||||||||||||||||||||
Sbjct: 55286 tacagcatcattggctttgg 55305
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     tgggcacgctgatctcgctg 254
               ||||||||||||||||||||
Sbjct: 2111593 tgggcacgctgatctcgctg 2111574
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>ref|XM_752783.1| Ustilago maydis 521 hypothetical protein (UM01729.1) partial mRNA
          Length = 2418

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gctgacgatgaggatggtga 373
            ||||||||||||||||||||
Sbjct: 1489 gctgacgatgaggatggtga 1508
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>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence
          Length = 203589

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 253    tggggtggaagaggggggagctgc 276
              ||||||||| ||||||||||||||
Sbjct: 134479 tggggtggaggaggggggagctgc 134502
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>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    cgatgaggatggtgaggagg 378
              ||||||||||||||||||||
Sbjct: 235287 cgatgaggatggtgaggagg 235268
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>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project)
          Length = 85992

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gctgacgatgaggatggtga 373
             ||||||||||||||||||||
Sbjct: 45880 gctgacgatgaggatggtga 45861
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>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence
          Length = 201412

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    aggatggtgaggaggccaag 383
              ||||||||||||||||||||
Sbjct: 133567 aggatggtgaggaggccaag 133586
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>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   tagtagtagcacctgatctc 515
             ||||||||||||||||||||
Sbjct: 81368 tagtagtagcacctgatctc 81349
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>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    tagtagtagcacctgatctc 515
              ||||||||||||||||||||
Sbjct: 185559 tagtagtagcacctgatctc 185578
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>gb|AC090526.3|AC090526 Homo sapiens chromosome 15 clone RP11-208K4 map 15q21.1, complete
             sequence
          Length = 168050

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ggtgaggaggccaagaacat 388
             ||||||||||||||||||||
Sbjct: 77290 ggtgaggaggccaagaacat 77271
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     cgatgaggatggtgaggagg 378
               ||||||||||||||||||||
Sbjct: 1383524 cgatgaggatggtgaggagg 1383543
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>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence
          Length = 167116

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   aggatggtgaggaggccaag 383
             ||||||||||||||||||||
Sbjct: 99451 aggatggtgaggaggccaag 99432
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>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
              sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    tagtagtagcacctgatctc 515
              ||||||||||||||||||||
Sbjct: 208809 tagtagtagcacctgatctc 208790
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>gb|AC002996.1|AC002996 Homo sapiens 12q24 BAC RPCI11-162P23 (Roswell Park Cancer Institute
             Human BAC library) complete sequence
          Length = 114842

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   tggccaagcctcctcctgct 356
             ||||||||||||||||||||
Sbjct: 16097 tggccaagcctcctcctgct 16078
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>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of
             Podospora anserina
          Length = 101256

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   cgatgaggatggtgaggagg 378
             ||||||||||||||||||||
Sbjct: 86908 cgatgaggatggtgaggagg 86927


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,242,351
Number of Sequences: 3902068
Number of extensions: 4242351
Number of successful extensions: 278762
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 278273
Number of HSP's gapped (non-prelim): 488
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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