ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags8n14 | 54 | AV834265 | not_full | gb|BT008977.1| Triticum aestivum clone wdk2c.pk005.c18:fis, full insert mRNA sequence Length = 940 | 1 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8n12 | 92 | AV919991 | not_full | gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8n10 | 95 | AV919990 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 14 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8n09 | 580 | AV919989 | not_full | gb|BT016812.1| Zea mays clone Contig645 mRNA sequence Length = 2327 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| rbags8n06 | 649 | AV919988 | not_full | ref|XM_481398.1| Oryza sativa (japonica cultivar-group), mRNA Length = 828 | 51 | not_full | CB004_MOUSE (Q91VH6) Protein C2orf4 homolog Length = 297 | 13 | -- | --- | - | -- | --- | - |
| rbags8n05 | 543 | AV919987 | not_full | ref|XM_475657.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 | 40 | not_full | EVI1_HUMAN (Q03112) Ecotropic virus integration 1 site protein Length = 1051 | 34 | -- | --- | - | -- | --- | - |
| rbags8n04 | 612 | AV919986 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 71 | not_full | RESE_BACSU (P35164) Sensor protein resE (EC 2.7.13.3) Length = 589 | 213 | -- | --- | - | -- | --- | - |
| rbags8n03 | 637 | AV919985 | not_full | gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 | 33 | not_full | ZSWM6_MOUSE (Q80TB7) Zinc finger SWIM domain-containing protein 6 (Fragment) Length = 1017 | 2 | -- | --- | - | -- | --- | - |
| rbags8n01 | 516 | AV919984 | not_full | ref|XM_482965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 | 69 | not_full | ATPQ_ARATH (Q9FT52) ATP synthase D chain, mitochondrial (EC 3.6.3.14) Length = 167 | 10 | -- | --- | - | -- | --- | - |
| rbags8m22 | 569 | AV919983 | not_full | dbj|AK061852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F09, full insert sequence Length = 1415 | 23 | not_full | GLDA_CITFR (P45511) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH) Length = 365 | 9 | -- | --- | - | -- | --- | - |
| rbags8m21 | 101 | AV919982 | not_full | emb|AL590075.8| Human DNA sequence from clone RP11-462L13 on chromosome X, complete sequence Length = 135711 | 23 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8m20 | 154 | AV919981 | not_full | ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 | 246 | not_full | R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3 Length = 206 | 45 | -- | --- | - | -- | --- | - |
| rbags8m19 | 148 | AV919980 | not_full | gb|AY108796.1| Zea mays PCO073308 mRNA sequence Length = 1147 | 89 | not_full | ATPBO_ARATH (Q9C5A9) ATP synthase beta chain 3, mitochondrial precursor (EC 3.6.3.14) Length = 559 | 30 | -- | --- | - | -- | --- | - |
| rbags8m17 | 560 | AV919979 | not_full | dbj|AK103683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136F06, full insert sequence Length = 1269 | 30 | not_full | ILVD_VIBCH (Q9KVW0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) Length = 613 | 13 | -- | --- | - | -- | --- | - |
| rbags8m14 | 579 | AV919978 | not_full | gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 | 233 | not_full | RS9_PODAN (P52810) 40S ribosomal protein S9 (S7) Length = 190 | 386 | -- | --- | - | -- | --- | - |
| rbags8m07 | 529 | AV919977 | not_full | dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full insert sequence Length = 2096 | 36 | not_full | BGLA_ENTAG (Q59437) Beta-glucosidase A (EC 3.2.1.21) (Gentiobiase) (Beta-D-glucoside glucohydrolase) Length = 480 | 76 | -- | --- | - | -- | --- | - |
| rbags8m06 | 279 | AV919976 | not_full | emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 | 500 | not_full | ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog) Length = 809 | 41 | -- | --- | - | -- | --- | - |
| rbags8m05 | 617 | AV919975 | not_full | gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 | 500 | not_full | RL3_ORYSA (P35684) 60S ribosomal protein L3 Length = 388 | 66 | -- | --- | - | -- | --- | - |
| rbags8m04 | 567 | AV919974 | not_full | emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 | 251 | not_full | METK_HORVU (P50299) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) Length = 394 | 207 | -- | --- | - | -- | --- | - |
| rbags8l23 | 627 | AV919973 | not_full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 500 | not_full | G3PX_HORVU (P26517) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) Length = 337 | 263 | -- | --- | - | -- | --- | - |
| rbags8l22 | 174 | AV919972 | not_full | ref|XM_744284.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g02420) partial mRNA Length = 2226 | 4 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8l21 | 617 | AV919971 | not_full | gb|BT017828.1| Zea mays clone EL01N0508G02.c mRNA sequence Length = 731 | 14 | not_full | RPO2J_ARATH (Q38859) DNA-directed RNA polymerase II subunit J (EC 2.7.7.6) (DNA-directed RNA polymerase II 13.6 kDa polypeptide) Length = 116 | 1 | -- | --- | - | -- | --- | - |
| rbags8l20 | 628 | AV919970 | not_full | emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 | 71 | not_full | VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 | 43 | -- | --- | - | -- | --- | - |
| rbags8l17 | 689 | AV919969 | not_full | emb|AJ420778.1|TAE420778 Triticum aestivum partial mRNA for putative fructose 1-,6- biphosphate aldolase (ald gene) Length = 1093 | 500 | not_full | ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 | 66 | -- | --- | - | -- | --- | - |
| rbags8l09 | 470 | AV919968 | not_full | ref|NM_197052.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0012L23.32), mRNA Length = 785 | 138 | not_full | BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription factor 3-like 4) Length = 158 | 11 | -- | --- | - | -- | --- | - |
| rbags8l05 | 630 | AV919967 | not_full | dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C09, full insert sequence Length = 1505 | 74 | not_full | CXCR5_HUMAN (P32302) C-X-C chemokine receptor type 5 (CXC-R5) (CXCR-5) (BurkittNULLS lymphoma receptor 1) (Monocyte-derived receptor 15) (MDR-15) (CD185 antigen) Length = 372 | 7 | -- | --- | - | -- | --- | - |
| rbags8l04 | 174 | AV919966 | not_full | emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-transferase I subunit (gstI gene) Length = 895 | 82 | not_full | GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29) (GST class-phi) Length = 213 | 28 | -- | --- | - | -- | --- | - |
| rbags8l03 | 539 | AV919965 | not_full | gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA sequence Length = 876 | 71 | not_full | NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-) Length = 568 | 60 | -- | --- | - | -- | --- | - |
| rbags8l01 | 614 | AV919964 | not_full | ref|NM_185280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 | 66 | not_full | PDIA6_MEDSA (P38661) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) Length = 364 | 27 | -- | --- | - | -- | --- | - |
| rbags8k22 | 550 | AV919963 | not_full | dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 | 139 | not_full | METE_SOLSC (Q42662) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) Length = 764 | 135 | -- | --- | - | -- | --- | - |
| rbags8k21 | 79 | AV919962 | not_full | gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 | 6 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8k20 | 665 | AV919961 | not_full | emb|X64618.1|TAHSP169B T.aestivum mRNA for heat shock protein 16.9B Length = 1070 | 332 | not_full | HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low molecular weight heat shock protein) (Heat shock protein 17) (HSP 16.9) Length = 151 | 57 | -- | --- | - | -- | --- | - |
| rbags8k17 | 600 | AV919960 | not_full | dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds Length = 2281 | 61 | not_full | VATA_HORVU (Q40002) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (Fragment) Length = 580 | 68 | -- | --- | - | -- | --- | - |
| rbags8k16 | 435 | AV919959 | not_full | ref|NM_197076.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0029C15.5), mRNA Length = 1523 | 26 | not_full | SO2B1_HUMAN (O94956) Solute carrier organic anion transporter family member 2B1 (Solute carrier family 21 member 9) (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) Length = 709 | 3 | -- | --- | - | -- | --- | - |
| rbags8k12 | 529 | AV919958 | not_full | gb|BT023998.1| Zea mays clone EL01N0405D04 mRNA sequence Length = 1938 | 29 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8k07 | 487 | AV919957 | not_full | dbj|AK121945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G04, full insert sequence Length = 1301 | 32 | not_full | RPF1_MOUSE (Q7TND5) Ribosome production factor 1 (Ribosome biogenesis protein RPF1) (Brix domain-containing protein 5) Length = 349 | 28 | -- | --- | - | -- | --- | - |
| rbags8k04 | 98 | AV919956 | not_full | gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, complete sequence Length = 109659 | 31 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8k03 | 430 | AV919955 | not_full | ref|NM_191070.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 | 28 | not_full | PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog Length = 910 | 10 | -- | --- | - | -- | --- | - |
| rbags8k02 | 590 | AV919954 | not_full | ref|XM_450193.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 | 27 | not_full | HT1_ARATH (Q2MHE4) Serine/threonine-protein kinase HT1 (EC 2.7.11.1) (High leaf temperature protein 1) Length = 390 | 466 | -- | --- | - | -- | --- | - |
| rbags8j24 | 648 | AV919953 | not_full | gb|BT009021.1| Triticum aestivum clone wdk3c.pk007.j3:fis, full insert mRNA sequence Length = 1349 | 52 | not_full | YN9B_YEAST (P52923) Protein YNR074C Length = 378 | 24 | -- | --- | - | -- | --- | - |
| rbags8j23 | 589 | AV919952 | not_full | emb|X15232.1|TAPGKCYT Wheat mRNA for cytosolic phosphoglycerate kinase (EC 2.7.2.3) Length = 1473 | 209 | not_full | PGKY_WHEAT (P12783) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) Length = 401 | 260 | -- | --- | - | -- | --- | - |
| rbags8j22 | 322 | AV919951 | not_full | gb|AY596540.1| Saccharum officinarum clone SCCCLR2001D07, complete sequence Length = 1804 | 19 | not_full | SERC2_MOUSE (Q8K0E7) Serine incorporator 2 (Tumor differentially expressed 2-like) Length = 450 | 10 | -- | --- | - | -- | --- | - |
| rbags8j18 | 91 | AV834264 | not_full | emb|AL390763.13| Human DNA sequence from clone RP11-264E18 on chromosome 10 Contains a novel gene, complete sequence Length = 162044 | 2 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8j17 | 81 | AV919950 | not_full | gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence Length = 766 | 26 | not_full | ANX4_FRAAN (P51074) Annexin-like protein RJ4 Length = 314 | 2 | -- | --- | - | -- | --- | - |
| rbags8j15 | 322 | AV919949 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 316 | not_full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 78 | -- | --- | - | -- | --- | - |
| rbags8j11 | 555 | AV834263 | not_full | gb|AC121137.18| Mus musculus chromosome 14, clone RP23-406K12, complete sequence Length = 164557 | 58 | not_full | SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing factor SRP75) (SRP001LB) Length = 494 | 2 | -- | --- | - | -- | --- | - |
| rbags8j10 | 198 | AV919948 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 13 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8j09 | 96 | AV834262 | not_full | ref|XM_640568.1| Dictyostelium discoideum hypothetical protein (DDB0202851), partial mRNA Length = 1593 | 25 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8j06 | 543 | AV919947 | not_full | ref|NM_187470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 | 495 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 109 | -- | --- | - | -- | --- | - |
| rbags8j05 | 558 | AV919946 | not_full | ref|XM_483551.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1691 | 85 | -- | --- | 0 | -- | --- | - | -- | --- | - |
