ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8l01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185280.1| Oryza sativa (japonica cultivar-group), predic... 323 4e-85
2dbj|AK103944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
3dbj|AK098931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
4dbj|AK062024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
5dbj|AK099341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
6gb|AY739289.1| Zea mays protein disulfide isomerase (PDIL2-2) mR... 244 3e-61
7gb|BT016699.1| Zea mays clone Contig532 mRNA sequence 236 7e-59
8ref|NM_183927.1| Oryza sativa (japonica cultivar-group), predic... 137 5e-29
9dbj|AK066111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
10gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
12gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
13gb|AY739288.1| Zea mays protein disulfide isomerase (PDIL2-1) mR... 103 7e-19
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
15dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
16gb|DQ222488.1| Solanum tuberosum clone 098B03 disulfide-isomeras... 62 2e-06
17emb|Z99495.1|HS441J1 Human DNA sequence from clone RP3-441J1 on ... 42 2.1
18gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, c... 42 2.1
19gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, co... 42 2.1
20gb|AC142293.2| Homo sapiens fosmid clone XXFOS-8806F2 from 4, co... 42 2.1
21emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on ch... 42 2.1
22gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosom... 40 8.4
23ref|XM_477491.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
24gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 40 8.4
25gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 8.4
26gb|BC043952.1| Xenopus laevis similar to chromosome 20 open read... 40 8.4
27gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete... 40 8.4
28gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple... 40 8.4
29gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complet... 40 8.4
30gb|AC005236.4| Homo sapiens BAC clone RP11-479C13 from 7, comple... 40 8.4
31gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se... 40 8.4
32gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, com... 40 8.4
33emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chr... 40 8.4
34emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on ... 40 8.4
35gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chrom... 40 8.4
36gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Par... 40 8.4
37gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Can... 40 8.4
38gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complet... 40 8.4
39gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, comp... 40 8.4
40dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 8.4
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
42gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complet... 40 8.4
43gb|AC007546.6| Homo sapiens 12 BAC RP11-946P6 (Roswell Park Canc... 40 8.4
44dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
45dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
46dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07,... 40 8.4
47emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on ch... 40 8.4
48gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete seq... 40 8.4
49emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-9... 40 8.4
50emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-3... 40 8.4
51emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-7... 40 8.4
52dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.4
53dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 8.4
54emb|CT573094.2| CH250-64B17, complete sequence 40 8.4
55gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 fro... 40 8.4
56gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, comple... 40 8.4
57gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, comple... 40 8.4
58emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 i... 40 8.4
59gb|M80235.1|ALFGRERP Alfalfa glucose-regulated endoplasmic retic... 40 8.4
60gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, comp... 40 8.4
61emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chr... 40 8.4
62emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-2... 40 8.4
63emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chro... 40 8.4
64emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chro... 40 8.4
65dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 8.4
66dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 8.4 
>ref|NM_185280.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1101

 Score =  323 bits (163), Expect = 4e-85
 Identities = 313/363 (86%)
 Strand = Plus / Minus

                                                                        
Query: 252  ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
            ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1101 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1042

                                                                        
Query: 312  actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 371
            |||||||||||||||||||| ||| || |||||||||| ||||||||| || || |||||
Sbjct: 1041 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 982

                                                                        
Query: 372  gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 431
            |||||||| ||  ||||||||||||  |||||||||||||||||||| |||| |||||||
Sbjct: 981  gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 922

                                                                        
Query: 432  accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 491
             ||| ||||||| ||| | |||||||| ||||| ||||||  ||| |||||||| |||| 
Sbjct: 921  gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 862

                                                                        
Query: 492  agcggcactgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctctga 551
             || ||||   |||| ||||| ||||| | | |||| ||| | ||||  |||||||||||
Sbjct: 861  tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 802

                                                                        
Query: 552  agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaa 611
            ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| || ||
Sbjct: 801  agtaagctgaccctttgaatcacggctggttccacatttctcattaataaacttgacgaa 742

               
Query: 612  gtc 614
            |||
Sbjct: 741  gtc 739
to top
>dbj|AK103944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A01, full
            insert sequence
          Length = 1431

 Score =  323 bits (163), Expect = 4e-85
 Identities = 313/363 (86%)
 Strand = Plus / Minus

                                                                        
Query: 252  ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
            ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1115 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1056

                                                                        
Query: 312  actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 371
            |||||||||||||||||||| ||| || |||||||||| ||||||||| || || |||||
Sbjct: 1055 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 996

                                                                        
Query: 372  gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 431
            |||||||| ||  ||||||||||||  |||||||||||||||||||| |||| |||||||
Sbjct: 995  gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 936

                                                                        
Query: 432  accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 491
             ||| ||||||| ||| | |||||||| ||||| ||||||  ||| |||||||| |||| 
Sbjct: 935  gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 876

                                                                        
Query: 492  agcggcactgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctctga 551
             || ||||   |||| ||||| ||||| | | |||| ||| | ||||  |||||||||||
Sbjct: 875  tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 816

                                                                        
Query: 552  agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaa 611
            ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| || ||
Sbjct: 815  agtaagctgaccctttgaatcacggctggttccacatttctcattaataaacttgacgaa 756

               
Query: 612  gtc 614
            |||
Sbjct: 755  gtc 753
to top
>dbj|AK098931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F18, full
            insert sequence
          Length = 1522

 Score =  323 bits (163), Expect = 4e-85
 Identities = 313/363 (86%)
 Strand = Plus / Minus

                                                                        
Query: 252  ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
            ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1156 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1097

                                                                        
Query: 312  actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 371
            |||||||||||||||||||| ||| || |||||||||| ||||||||| || || |||||
Sbjct: 1096 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1037

                                                                        
Query: 372  gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 431
            |||||||| ||  ||||||||||||  |||||||||||||||||||| |||| |||||||
Sbjct: 1036 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 977

                                                                        
Query: 432  accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 491
             ||| ||||||| ||| | |||||||| ||||| ||||||  ||| |||||||| |||| 
Sbjct: 976  gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 917

                                                                        
Query: 492  agcggcactgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctctga 551
             || ||||   |||| ||||| ||||| | | |||| ||| | ||||  |||||||||||
Sbjct: 916  tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 857

                                                                        
Query: 552  agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaa 611
            ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| || ||
Sbjct: 856  agtaagctgaccctttgaatcacggctggttccacatttctcattaataaacttgacgaa 797

               
Query: 612  gtc 614
            |||
Sbjct: 796  gtc 794
to top
>dbj|AK062024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G03, full
            insert sequence
          Length = 1544

 Score =  323 bits (163), Expect = 4e-85
 Identities = 313/363 (86%)
 Strand = Plus / Minus

                                                                        
Query: 252  ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
            ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1158 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1099

                                                                        
Query: 312  actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 371
            |||||||||||||||||||| ||| || |||||||||| ||||||||| || || |||||
Sbjct: 1098 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1039

                                                                        
Query: 372  gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 431
            |||||||| ||  ||||||||||||  |||||||||||||||||||| |||| |||||||
Sbjct: 1038 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 979

                                                                        
Query: 432  accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 491
             ||| ||||||| ||| | |||||||| ||||| ||||||  ||| |||||||| |||| 
Sbjct: 978  gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 919

                                                                        
Query: 492  agcggcactgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctctga 551
             || ||||   |||| ||||| ||||| | | |||| ||| | ||||  |||||||||||
Sbjct: 918  tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 859

                                                                        
Query: 552  agtaagctgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaa 611
            ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| || ||
Sbjct: 858  agtaagctgaccctttgaatcacggctggttccacatttctcattaataaacttgacgaa 799

               
Query: 612  gtc 614
            |||
Sbjct: 798  gtc 796
to top
>dbj|AK099341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028P21, full
            insert sequence
          Length = 1528

 Score =  301 bits (152), Expect = 1e-78
 Identities = 313/366 (85%), Gaps = 3/366 (0%)
 Strand = Plus / Minus

                                                                        
Query: 252  ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
            ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1162 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1103

                                                                        
Query: 312  actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 371
            |||||||||||||||||||| ||| || |||||||||| ||||||||| || || |||||
Sbjct: 1102 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1043

                                                                        
Query: 372  gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgc---ttgacagc 428
            |||||||| ||  ||||||||||||  |||||||||||||||||||| |   ||| ||||
Sbjct: 1042 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacctgttggcagc 983

                                                                        
Query: 429  aggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtc 488
            ||| ||| ||||||| ||| | |||||||| ||||| ||||||  ||| |||||||| ||
Sbjct: 982  agggccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatc 923

                                                                        
Query: 489  atcagcggcactgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctc 548
            ||  || ||||   |||| ||||| ||||| | | |||| ||| | ||||  ||||||||
Sbjct: 922  atttgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctc 863

                                                                        
Query: 549  tgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaacttaac 608
            |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 862  tgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaacttgac 803

                  
Query: 609  aaagtc 614
             |||||
Sbjct: 802  gaagtc 797
to top
>gb|AY739289.1| Zea mays protein disulfide isomerase (PDIL2-2) mRNA, complete cds
          Length = 1408

 Score =  244 bits (123), Expect = 3e-61
 Identities = 291/347 (83%)
 Strand = Plus / Minus

                                                                        
Query: 268  gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 327
            ||||||||||||||||| | |  ||||||||| ||||||||||||||||| |||||||||
Sbjct: 1093 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1034

                                                                        
Query: 328  aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 387
            | || ||| || ||||||||||| |||||||| || |||||||||||||| |  |  |||
Sbjct: 1033 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 974

                                                                        
Query: 388  ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 447
            ||||||||| |  ||||||| |||||||| |||||| | |||| ||| |||||||| |||
Sbjct: 973  ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 914

                                                                        
Query: 448  gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 507
             | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || 
Sbjct: 913  acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 854

                                                                        
Query: 508  tccttgacaagggcatccaaacttgccacaagcccagcctctgaagtaagctgacccttt 567
            ||||| ||||| | || ||| |||| ||||||||||||||||  | | || || ||||||
Sbjct: 853  tccttcacaagaggattcaagcttggcacaagcccagcctcttgattcaggtggcccttt 794

                                                           
Query: 568  gaatcacggctagttccacttttctcattaatgaacttaacaaagtc 614
            | ||| ||||| || ||||  ||||||||||||||||| ||||||||
Sbjct: 793  ggatcccggctggtgccacacttctcattaatgaacttgacaaagtc 747
to top
>gb|BT016699.1| Zea mays clone Contig532 mRNA sequence
          Length = 1425

 Score =  236 bits (119), Expect = 7e-59
 Identities = 290/347 (83%)
 Strand = Plus / Minus

                                                                        
Query: 268  gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 327
            ||||||||||||||||| | |  ||||||||| ||||||||||||||||| |||||||||
Sbjct: 1088 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1029

                                                                        
Query: 328  aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 387
            | || ||| || ||||||||||| |||||||| || |||||||||||||| |  |  |||
Sbjct: 1028 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 969

                                                                        
Query: 388  ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 447
            ||||||||| |  ||||||| |||||||| |||||| | |||| ||| |||||||| |||
Sbjct: 968  ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 909

                                                                        
Query: 448  gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 507
             | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || 
Sbjct: 908  acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 849

                                                                        
Query: 508  tccttgacaagggcatccaaacttgccacaagcccagcctctgaagtaagctgacccttt 567
            ||||| ||||| | || ||| |||| ||||||||||||||||  | | || ||  |||||
Sbjct: 848  tccttcacaagaggattcaagcttggcacaagcccagcctcttgattcaggtgggccttt 789

                                                           
Query: 568  gaatcacggctagttccacttttctcattaatgaacttaacaaagtc 614
            | ||| ||||| || ||||  ||||||||||||||||| ||||||||
Sbjct: 788  ggatcccggctggtgccacacttctcattaatgaacttgacaaagtc 742
to top
>ref|NM_183927.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                       
Query: 406 tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 465
           |||| |||||| |||||  |||||| ||||||||||||  || |||||||||| || || 
Sbjct: 962 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 903

                                                                       
Query: 466 gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagggcatcc 525
           |||||||||||||||||||||||||  || ||||   |||| |||||  | |||||||||
Sbjct: 902 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 843

                                                                       
Query: 526 aaacttgccacaagcccagcctctgaagtaagctgaccctttgaatcacggctagttcca 585
           |||||||| |   |||| |||||||||||||| || ||||| | ||||||||| || |||
Sbjct: 842 aaacttgctatgcgccccgcctctgaagtaagttggcccttagtatcacggctggtacca 783

                                        
Query: 586 cttttctcattaatgaacttaacaaagtc 614
           |  ||||||||||||||||| ||||||||
Sbjct: 782 cacttctcattaatgaacttgacaaagtc 754



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 267  tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 326
            |||||| | |||||||||||||  |||||||||||| || || || ||||| ||||||||
Sbjct: 1101 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1042

                                                      
Query: 327  caacaagcgatggagcctctcagtttccttctttgtatagtc 368
            ||||| ||| |  |||||||| ||||||||||| ||||||||
Sbjct: 1041 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1000
to top
>dbj|AK066111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J24, full
            insert sequence
          Length = 1549

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 406  tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 465
            |||| |||||| |||||  |||||| ||||||||||||  || |||||||||| || || 
Sbjct: 1075 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 1016

                                                                        
Query: 466  gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagggcatcc 525
            |||||||||||||||||||||||||  || ||||   |||| |||||  | |||||||||
Sbjct: 1015 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 956

                                                                        
Query: 526  aaacttgccacaagcccagcctctgaagtaagctgaccctttgaatcacggctagttcca 585
            |||||||| |   |||| |||||||||||||| || ||||| | ||||||||| || |||
Sbjct: 955  aaacttgctatgcgccccgcctctgaagtaagttggcccttagtatcacggctggtacca 896

                                         
Query: 586  cttttctcattaatgaacttaacaaagtc 614
            |  ||||||||||||||||| ||||||||
Sbjct: 895  cacttctcattaatgaacttgacaaagtc 867



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 267  tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 326
            |||||| | |||||||||||||  |||||||||||| || || || ||||| ||||||||
Sbjct: 1214 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1155

                                                      
Query: 327  caacaagcgatggagcctctcagtttccttctttgtatagtc 368
            ||||| ||| |  |||||||| ||||||||||| ||||||||
Sbjct: 1154 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1113
to top
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
              complete sequence
          Length = 145044

 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                          
Query: 252    ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
              ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 112409 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 112468

                         
Query: 312    actgatcgact 322
              |||||||||||
Sbjct: 112469 actgatcgact 112479



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                          
Query: 545    cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 604
              |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 112960 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 113019

                        
Query: 605    taacaaagtc 614
              | || |||||
Sbjct: 113020 tgacgaagtc 113029



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                          
Query: 321    cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 380
              ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| 
Sbjct: 112568 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 112627

                                                    
Query: 381    caatatcttctttgcaacgttcacatagatctttccgt 418
              ||  ||||||||||||  ||||||||||||||||||||
Sbjct: 112628 catgatcttctttgcagagttcacatagatctttccgt 112665
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                           
Query: 252     ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
               ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 3234692 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 3234751

                          
Query: 312     actgatcgact 322
               |||||||||||
Sbjct: 3234752 actgatcgact 3234762



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                           
Query: 545     cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 604
               |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 3235243 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 3235302

                         
Query: 605     taacaaagtc 614
               | || |||||
Sbjct: 3235303 tgacgaagtc 3235312



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                           
Query: 321     cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 380
               ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| 
Sbjct: 3234851 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 3234910

                                                     
Query: 381     caatatcttctttgcaacgttcacatagatctttccgt 418
               ||  ||||||||||||  ||||||||||||||||||||
Sbjct: 3234911 catgatcttctttgcagagttcacatagatctttccgt 3234948
to top
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
             complete sequence
          Length = 167317

 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                         
Query: 252   ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 311
             ||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 28516 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 28575

                        
Query: 312   actgatcgact 322
             |||||||||||
Sbjct: 28576 actgatcgact 28586



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                         
Query: 545   cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 604
             |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 29067 cctctgaagtaagctgaccctttgaatcacggctggttccacatttctcattaataaact 29126

                       
Query: 605   taacaaagtc 614
             | || |||||
Sbjct: 29127 tgacgaagtc 29136



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                         
Query: 321   cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 380
             ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| 
Sbjct: 28675 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 28734

                                                   
Query: 381   caatatcttctttgcaacgttcacatagatctttccgt 418
             ||  ||||||||||||  ||||||||||||||||||||
Sbjct: 28735 catgatcttctttgcagagttcacatagatctttccgt 28772
to top
>gb|AY739288.1| Zea mays protein disulfide isomerase (PDIL2-1) mRNA, complete cds
          Length = 1447

 Score =  103 bits (52), Expect = 7e-19
 Identities = 280/356 (78%)
 Strand = Plus / Minus

                                                                        
Query: 259  gagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatc 318
            |||||||  ||||||| |||||||||||||   || || ||||| ||||| || ||||| 
Sbjct: 1117 gagaaagtcgaaagaacgttcttcttgatgataaactcgtcggccttggaggggctgatg 1058

                                                                        
Query: 319  gacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttc 378
            ||||||||||| | |||||  |||||||  ||||||||||  ||||| ||   ||| |||
Sbjct: 1057 gacttctccaagatgcgatcaagcctcttggtttccttctcagtatactcgttgcctttc 998

                                                                        
Query: 379  tgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactg 438
            |  |  ||||||||||| | | | ||||||| |||||| ||| |  |||||| |||||||
Sbjct: 997  tctagaatcttctttgcgatggttacatagacctttccatgccttgcagcagaaccactg 938

                                                                        
Query: 439  agctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggca 498
            |||||  | |||||||| || ||  | ||||||| |||||| ||||||||| | |  |||
Sbjct: 937  agcttatctgcctcctcctccatactggagaggacttcctttcgcttgtcaccggaagca 878

                                                                        
Query: 499  ctgtggaaatccttgacaagggcatccaaacttgccacaagcccagcctctgaagtaagc 558
            |   |||| |||||  | ||| |||||| |||||| | | | ||||||||||| || || 
Sbjct: 877  ccaaggaactccttagccaggacatccagacttgctatacggccagcctctgaggttagt 818

                                                                    
Query: 559  tgaccctttgaatcacggctagttccacttttctcattaatgaacttaacaaagtc 614
            ||||||||||  |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 817  tgaccctttgtgtcacggctggtaccactcttctcgttaatgaacttgacaaagtc 762
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                            
Query: 425      cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 484
                |||||| ||||||||||||  || |||||||||| || || |||||||||||||||||||
Sbjct: 13339689 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 13339630

                                                                 
Query: 485      tgtcatcagcggcactgtggaaatccttgacaagggcatccaaacttgc 533
                ||||||  || ||||   |||| |||||  | |||||||||||||||||
Sbjct: 13339629 tgtcattggcagcaccaaggaactcctttgcgagggcatccaaacttgc 13339581



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 545      cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 604
                ||||||||||||| || ||||| | ||||||||| || ||||  ||||||||||||||||
Sbjct: 13339478 cctctgaagtaagttggcccttagtatcacggctggtaccacacttctcattaatgaact 13339419

                          
Query: 605      taacaaagtc 614
                | ||||||||
Sbjct: 13339418 tgacaaagtc 13339409



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 321      cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 368
                ||||||||||| ||| |  |||||||| ||||||||||| ||||||||
Sbjct: 13339884 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 13339837



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 267      tgaaagaatgttcttcttgatggcgaattcatcggc 302
                |||||| | |||||||||||||  ||||||||||||
Sbjct: 13340044 tgaaaggacgttcttcttgatgatgaattcatcggc 13340009
to top
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088D01
          Length = 146144

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                         
Query: 425   cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 484
             |||||| ||||||||||||  || |||||||||| || || |||||||||||||||||||
Sbjct: 80047 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 79988

                                                              
Query: 485   tgtcatcagcggcactgtggaaatccttgacaagggcatccaaacttgc 533
             ||||||  || ||||   |||| |||||  | |||||||||||||||||
Sbjct: 79987 tgtcattggcagcaccaaggaactcctttgcgagggcatccaaacttgc 79939



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 545   cctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaact 604
             ||||||||||||| || ||||| | ||||||||| || ||||  ||||||||||||||||
Sbjct: 79836 cctctgaagtaagttggcccttagtatcacggctggtaccacacttctcattaatgaact 79777

                       
Query: 605   taacaaagtc 614
             | ||||||||
Sbjct: 79776 tgacaaagtc 79767



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 321   cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 368
             ||||||||||| ||| |  |||||||| ||||||||||| ||||||||
Sbjct: 80242 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 80195



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 267   tgaaagaatgttcttcttgatggcgaattcatcggc 302
             |||||| | |||||||||||||  ||||||||||||
Sbjct: 80402 tgaaaggacgttcttcttgatgatgaattcatcggc 80367
to top
>gb|DQ222488.1| Solanum tuberosum clone 098B03 disulfide-isomerase precursor-like
           protein mRNA, complete cds
          Length = 1408

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 544 gcctctgaagtaagctgaccctttgaatcacggctagttccacttttctcattaatgaac 603
           |||| |||||||| ||| || ||||||||||||||||| ||||  |||||||| ||||| 
Sbjct: 847 gcctttgaagtaaactgtccttttgaatcacggctagtgccacacttctcattgatgaaa 788

                      
Query: 604 ttaacaaagtc 614
           || ||||||||
Sbjct: 787 ttgacaaagtc 777
to top
>emb|Z99495.1|HS441J1 Human DNA sequence from clone RP3-441J1 on chromosome 6p24 Contains the
             5' end of gene KIAA1733, complete sequence
          Length = 151213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 578   tagttccacttttctcattaa 598
             |||||||||||||||||||||
Sbjct: 82816 tagttccacttttctcattaa 82836
to top
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence
          Length = 184396

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   ctctattttccttttgtcttt 168
             |||||||||||||||||||||
Sbjct: 74038 ctctattttccttttgtcttt 74018
to top
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence
          Length = 141422

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   tccttttgtctttcttcgcttctct 180
             ||||||||||||||||| |||||||
Sbjct: 83077 tccttttgtctttcttctcttctct 83101
to top
>gb|AC142293.2| Homo sapiens fosmid clone XXFOS-8806F2 from 4, complete sequence
          Length = 32823

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 378   ctgcaatatcttctttgcaac 398
             |||||||||||||||||||||
Sbjct: 18966 ctgcaatatcttctttgcaac 18946
to top
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete
              sequence
          Length = 169465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 134    gccatctctctaatctctattttcctttt 162
              |||||||||||| |||| |||||||||||
Sbjct: 135130 gccatctctctagtctccattttcctttt 135102
to top
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence
          Length = 197609

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   taatctctattttccttttgtctt 167
             |||||| |||||||||||||||||
Sbjct: 43611 taatctttattttccttttgtctt 43588
to top
>ref|XM_477491.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  aatgttcttcttgatggcga 292
            ||||||||||||||||||||
Sbjct: 1435 aatgttcttcttgatggcga 1454
to top
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    tcagtttccttctttgtata 365
              ||||||||||||||||||||
Sbjct: 198845 tcagtttccttctttgtata 198864
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     tattttccttttgtctttct 170
               ||||||||||||||||||||
Sbjct: 1851099 tattttccttttgtctttct 1851080
to top
>gb|BC043952.1| Xenopus laevis similar to chromosome 20 open reading frame 6 (human),
            mRNA (cDNA clone IMAGE:5570650), partial cds
          Length = 1703

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  attttccttttgtctttctt 171
            ||||||||||||||||||||
Sbjct: 1662 attttccttttgtctttctt 1643
to top
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence
          Length = 234064

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tcagtttccttctttgtata 365
             ||||||||||||||||||||
Sbjct: 96200 tcagtttccttctttgtata 96181
to top
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    catctctctaatctctattt 155
              ||||||||||||||||||||
Sbjct: 213250 catctctctaatctctattt 213269
to top
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence
          Length = 182204

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    catctctctaatctctattt 155
              ||||||||||||||||||||
Sbjct: 124415 catctctctaatctctattt 124396
to top
>gb|AC005236.4| Homo sapiens BAC clone RP11-479C13 from 7, complete sequence
          Length = 87593

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   cgatggagcctctcagtttc 353
             ||||||||||||||||||||
Sbjct: 34205 cgatggagcctctcagtttc 34186
to top
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   ttctttgcaacgttcacata 407
             ||||||||||||||||||||
Sbjct: 19319 ttctttgcaacgttcacata 19338
to top
>gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, complete sequence
          Length = 185534

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    tcagtttccttctttgtata 365
              ||||||||||||||||||||
Sbjct: 182094 tcagtttccttctttgtata 182075
to top
>emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chromosome X Contains the
             5' end of a novel gene (MGC44287), complete sequence
          Length = 46890

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tctattttccttttgtcttt 168
             ||||||||||||||||||||
Sbjct: 28163 tctattttccttttgtcttt 28144
to top
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4
             Contains a novel gene, an actin, beta (ACTB) pseudogene
             and a CpG island, complete sequence
          Length = 123637

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tctattttccttttgtcttt 168
             ||||||||||||||||||||
Sbjct: 84210 tctattttccttttgtcttt 84229
to top
>gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chromosome 7, complete
              sequence
          Length = 166256

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    cgatggagcctctcagtttc 353
              ||||||||||||||||||||
Sbjct: 117527 cgatggagcctctcagtttc 117546
to top
>gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 180685

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   gctagttccacttttctcat 595
             ||||||||||||||||||||
Sbjct: 18655 gctagttccacttttctcat 18674
to top
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ttttccttttgtctttcttc 172
             ||||||||||||||||||||
Sbjct: 35791 ttttccttttgtctttcttc 35772
to top
>gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complete sequence
          Length = 130284

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   cgatggagcctctcagtttc 353
             ||||||||||||||||||||
Sbjct: 79691 cgatggagcctctcagtttc 79710
to top
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence
          Length = 227245

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tctctctaatctctattttc 157
              ||||||||||||||||||||
Sbjct: 120017 tctctctaatctctattttc 120036
to top
>dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230040N22 product:unclassifiable, full
            insert sequence
          Length = 3051

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 145  aatctctattttccttttgtcttt 168
            |||||||||||||||||| |||||
Sbjct: 1955 aatctctattttccttttttcttt 1978
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 273      aatgttcttcttgatggcga 292
                ||||||||||||||||||||
Sbjct: 10843881 aatgttcttcttgatggcga 10843862
to top
>gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complete sequence
          Length = 156083

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ttttccttttgtctttcttc 172
             ||||||||||||||||||||
Sbjct: 31068 ttttccttttgtctttcttc 31087
to top
>gb|AC007546.6| Homo sapiens 12 BAC RP11-946P6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168396

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   ctctcagtttccttctttgt 362
             ||||||||||||||||||||
Sbjct: 99531 ctctcagtttccttctttgt 99550
to top
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0018O23
          Length = 142143

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   aatgttcttcttgatggcga 292
             ||||||||||||||||||||
Sbjct: 54640 aatgttcttcttgatggcga 54621
to top
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0028O21
          Length = 134543

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   aatgttcttcttgatggcga 292
             ||||||||||||||||||||
Sbjct: 20256 aatgttcttcttgatggcga 20237
to top
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete
              sequences
          Length = 180152

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ctaatctctattttcctttt 162
              ||||||||||||||||||||
Sbjct: 106801 ctaatctctattttcctttt 106782
to top
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete
              sequence
          Length = 226471

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    tttccttttgtctttcttcgcttc 177
              ||||||||||||||||||| ||||
Sbjct: 155009 tttccttttgtctttcttcccttc 155032
to top
>gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete sequence
          Length = 168360

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    tattttccttttgtctttct 170
              ||||||||||||||||||||
Sbjct: 136830 tattttccttttgtctttct 136811
to top
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167642

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tctattttccttttgtcttt 168
             ||||||||||||||||||||
Sbjct: 19346 tctattttccttttgtcttt 19327
to top
>emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-349D8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204662

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gtctttcttcgcttctctct 182
              ||||||||||||||||||||
Sbjct: 118488 gtctttcttcgcttctctct 118469
to top
>emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-724F15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192387

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 533   ccacaagcccagcctctgaagtaa 556
             |||||||||||||||||| |||||
Sbjct: 63594 ccacaagcccagcctctgcagtaa 63617
to top
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ctaatctctattttcctttt 162
              ||||||||||||||||||||
Sbjct: 163745 ctaatctctattttcctttt 163726
to top
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete
             sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   aatctctattttccttttgtcttt 168
             |||||||||||| |||||||||||
Sbjct: 92713 aatctctattttgcttttgtcttt 92736
to top
>emb|CT573094.2| CH250-64B17, complete sequence
          Length = 144218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   gacaagggcatccaaacttgccac 536
             |||||||||||||| |||||||||
Sbjct: 60140 gacaagggcatccacacttgccac 60117
to top
>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown,
              complete sequence
          Length = 145427

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ctgccatctctctaatctct 151
              ||||||||||||||||||||
Sbjct: 132985 ctgccatctctctaatctct 133004
to top
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence
          Length = 163235

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    aatctctattttccttttgtcttt 168
              |||||||||||||||||| |||||
Sbjct: 107877 aatctctattttccttttttcttt 107854
to top
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence
          Length = 177716

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   taatctctattttccttttgtctt 167
             |||||| |||||||||||||||||
Sbjct: 54513 taatctttattttccttttgtctt 54536
to top
>emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 in linkage group 23,
             complete sequence
          Length = 65564

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   tttgtctttcttcgcttctctctt 183
             ||||||||||||| ||||||||||
Sbjct: 28480 tttgtctttcttctcttctctctt 28457
to top
>gb|M80235.1|ALFGRERP Alfalfa glucose-regulated endoplasmic reticular protein mRNA,
           complete cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 541 ccagcctctgaagtaagctgaccctttgaatcacggctagttccacttttctcatt 596
           |||||||| ||||||||||| || |||| ||| || || ||||||  |||||||||
Sbjct: 844 ccagcctcagaagtaagctgtccttttgcatctcgacttgttccagatttctcatt 789
to top
>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tcagtttccttctttgtata 365
             ||||||||||||||||||||
Sbjct: 26532 tcagtttccttctttgtata 26551
to top
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete
              sequence
          Length = 167978

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cattaagaggagaaagctga 269
              ||||||||||||||||||||
Sbjct: 114715 cattaagaggagaaagctga 114734
to top
>emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-214N1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145035

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tctattttccttttgtcttt 168
              ||||||||||||||||||||
Sbjct: 141287 tctattttccttttgtcttt 141268
to top
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete
              sequence
          Length = 119311

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tctattttccttttgtcttt 168
              ||||||||||||||||||||
Sbjct: 102482 tctattttccttttgtcttt 102463
to top
>emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chromosome 2, complete
             sequence
          Length = 203592

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   agcggcactgtggaaatcct 511
             ||||||||||||||||||||
Sbjct: 83420 agcggcactgtggaaatcct 83401
to top
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
            clone:B330A3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  ctaatctctattttcctttt 162
            ||||||||||||||||||||
Sbjct: 5144 ctaatctctattttcctttt 5125
to top
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 6/11
          Length = 156909

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   aatctctattttccttttgtcttt 168
             |||||||||||| |||||||||||
Sbjct: 40282 aatctctattttgcttttgtcttt 40305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,419,446
Number of Sequences: 3902068
Number of extensions: 5419446
Number of successful extensions: 116489
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116216
Number of HSP's gapped (non-prelim): 260
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top