>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                            
Query: 19       tgaaactcattttncatgtcattgatgccactcanaatctntatcttntggacatggnca 78
                |||| |||||| | |||||||||||||||||||| |||||  ||||| || |||||| | 
Sbjct: 19319788 tgaagctcattcttcatgtcattgatgccactcaaaatctcaatcttctgtacatggtcg 19319729

                                                      
Query: 79       agtgaatngatgaaattagctncagctccttcctgctg 116
                |||||||  |  || || ||| || |||||||||||||
Sbjct: 19319728 agtgaattaagaaagtttgcttcaactccttcctgctg 19319691

>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                         
Query: 19    tgaaactcattttncatgtcattgatgccactcanaatctntatcttntggacatggnca 78
             |||| |||||| | |||||||||||||||||||| |||||  ||||| || |||||| | 
Sbjct: 24561 tgaagctcattcttcatgtcattgatgccactcaaaatctcaatcttctgtacatggtcg 24502

                                                   
Query: 79    agtgaatngatgaaattagctncagctccttcctgctg 116
             |||||||  |  || || ||| || |||||||||||||
Sbjct: 24501 agtgaattaagaaagtttgcttcaactccttcctgctg 24464

>dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115A04, full
            insert sequence
          Length = 1679

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 19   tgaaactcattttncatgtcattgatgccactcanaatctntatcttntggacatggnca 78
            |||| |||||| | |||||||||||||||||||| |||||  ||||| || |||||| | 
Sbjct: 1300 tgaagctcattcttcatgtcattgatgccactcaaaatctcaatcttctgtacatggtcg 1241

                                                  
Query: 79   agtgaatngatgaaattagctncagctccttcctgctg 116
            |||||||  |  || || ||| || |||||||||||||
Sbjct: 1240 agtgaattaagaaagtttgcttcaactccttcctgctg 1203

>gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosome 18, complete sequence
          Length = 192563

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      attccatgaaggattgaaac 24
              ||||||||||||||||||||
Sbjct: 171602 attccatgaaggattgaaac 171621

>gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, complete sequence
          Length = 208349

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      attccatgaaggattgaaac 24
              ||||||||||||||||||||
Sbjct: 107827 attccatgaaggattgaaac 107846

>emb|AJ505905.1|CEL505905 Caenorhabditis elegans mRNA for VAB-10B protein, MACF-like isoform
            (vab-10 gene), mc44 allele
          Length = 14268

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 9713 aaggattccatgaaggatt 9731

>emb|AJ505816.1|CEL505816 Caenorhabditis elegans mRNA for VAB-10B protein, MACF-like isoform
            (vab-10 gene), vab-10 wt allele
          Length = 15241

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 9713 aaggattccatgaaggatt 9731

>ref|NM_001026688.1| Caenorhabditis elegans Variable ABnormal morphology family member
            (vab-10) (vab-10) mRNA, complete cds
          Length = 13233

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 8006 aaggattccatgaaggatt 8024

>ref|NM_001026684.1| Caenorhabditis elegans Variable ABnormal morphology family member
            (vab-10) (vab-10) mRNA, complete cds
          Length = 15187

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 9641 aaggattccatgaaggatt 9659

>ref|NM_001026683.1| Caenorhabditis elegans Variable ABnormal morphology family member
            (vab-10) (vab-10) mRNA, complete cds
          Length = 15221

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 9693 aaggattccatgaaggatt 9711

>gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, complete sequence
          Length = 154891

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    aaggattgaaactcatttt 31
             |||||||||||||||||||
Sbjct: 86640 aaggattgaaactcatttt 86622

>gb|AY190937.1| Drosophila erecta clone DERF01_40_C09 (D1409) genomic sequence
          Length = 37077

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaggattccatgaaggatt 19
             |||||||||||||||||||
Sbjct: 18786 aaggattccatgaaggatt 18804

>emb|Z93398.1|CEZK1151 Caenorhabditis elegans Cosmid ZK1151, complete sequence
          Length = 26014

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    aaggattccatgaaggatt 19
            |||||||||||||||||||
Sbjct: 3542 aaggattccatgaaggatt 3524


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 503,639
Number of Sequences: 3902068
Number of extensions: 503639
Number of successful extensions: 31272
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31250
Number of HSP's gapped (non-prelim): 19
length of query: 198
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 176
effective length of database: 17,147,199,772
effective search space: 3017907159872
effective search space used: 3017907159872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)