Clone Name	rbags8m14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)	190	2e-48
2	RS9_RAT (P29314) 40S ribosomal protein S9	187	1e-47
3	RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9	187	1e-47
4	RS9_HUMAN (P46781) 40S ribosomal protein S9	187	1e-47
5	RS9_DROME (P55935) 40S ribosomal protein S9	181	1e-45
6	RS9B_SCHPO (O59675) 40S ribosomal protein S9-B	176	3e-44
7	RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A	176	6e-44
8	RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP2...	175	1e-43
9	RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP2...	175	1e-43
10	RS9_CAEEL (Q20228) 40S ribosomal protein S9	171	1e-42
11	RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal prote...	167	2e-41
12	RS9_TRYBB (P17959) Probable 40S ribosomal protein S9	156	5e-38
13	RS9_NAEFO (Q25555) 40S ribosomal protein S9	147	2e-35
14	RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)	112	8e-25
15	RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)	110	3e-24
16	RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)	109	5e-24
17	RS4_PYRHO (O59306) 30S ribosomal protein S4P	82	1e-15
18	RS4_PYRFU (P61993) 30S ribosomal protein S4P	81	2e-15
19	RS4_PYRAB (P61992) 30S ribosomal protein S4P	81	2e-15
20	RS4_METJA (P54020) 30S ribosomal protein S4P	81	2e-15
21	RS4_SULAC (P39467) 30S ribosomal protein S4P	80	4e-15
22	RS4_SULTO (Q96YV8) 30S ribosomal protein S4P	79	7e-15
23	RS4_METKA (Q8TVC0) 30S ribosomal protein S4P	78	2e-14
24	RS4_AERPE (Q9YB58) 30S ribosomal protein S4P	73	5e-13
25	RS4_THEVO (Q97B95) 30S ribosomal protein S4P	73	7e-13
26	RS4_SULSO (P95987) 30S ribosomal protein S4P	73	7e-13
27	RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P	72	9e-13
28	RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P	72	9e-13
29	RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P	71	3e-12
30	RS4_METBF (Q46GC8) 30S ribosomal protein S4P	70	6e-12
31	RS4_ARCFU (O28000) 30S ribosomal protein S4P	68	2e-11
32	RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P	68	2e-11
33	RS4_METMP (Q6LXN0) 30S ribosomal protein S4P	67	3e-11
34	RS4_METTH (O26142) 30S ribosomal protein S4P	65	1e-10
35	RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P	63	7e-10
36	RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P	63	7e-10
37	IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein...	62	2e-09
38	IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein...	61	3e-09
39	RS4_METAC (Q8TRR1) 30S ribosomal protein S4P	61	3e-09
40	RS4_METMA (Q8PV18) 30S ribosomal protein S4P	61	3e-09
41	RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P	60	5e-09
42	IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein...	57	4e-08
43	RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)	55	2e-07
44	YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like	52	2e-06
45	RS4_PELCD (Q3A6M1) 30S ribosomal protein S4	49	8e-06
46	RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4	49	1e-05
47	RS4_FUSNN (Q8RE43) 30S ribosomal protein S4	47	4e-05
48	RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4	47	4e-05
49	RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A	47	5e-05
50	IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein...	46	7e-05
51	RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4	46	7e-05
52	RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)	46	7e-05
53	RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4	46	9e-05
54	RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4	46	9e-05
55	RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4	46	9e-05
56	RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4	46	9e-05
57	RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4	46	9e-05
58	RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4	46	9e-05
59	RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
60	RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
61	RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
62	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	45	1e-04
63	IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein...	45	1e-04
64	RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B	45	1e-04
65	RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
66	RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4	45	1e-04
67	RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
68	RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4	45	2e-04
69	RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
70	RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
71	RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
72	RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
73	RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
74	RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
75	RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
76	RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
77	RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
78	RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
79	RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
80	RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
81	RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
82	RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
83	RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4	45	2e-04
84	RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4	44	3e-04
85	RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4	44	3e-04
86	RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4	44	3e-04
87	RT04_RECAM (O21263) Mitochondrial ribosomal protein S4	44	3e-04
88	RS4_STRCO (Q9KXP5) 30S ribosomal protein S4	44	3e-04
89	RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
90	RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
91	RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4	44	3e-04
92	RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4	44	3e-04
93	RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4	44	3e-04
94	RS4_STRAW (Q827S7) 30S ribosomal protein S4	44	3e-04
95	RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4	44	4e-04
96	RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4	44	4e-04
97	RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)	44	4e-04
98	RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)	44	4e-04
99	RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4	43	6e-04
100	RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4	43	6e-04
101	RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
102	RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
103	RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
104	RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
105	RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
106	RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
107	RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
108	RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
109	RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
110	RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
111	RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
112	RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
113	RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
114	RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
115	RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)	43	6e-04
116	RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4	43	6e-04
117	RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4	43	6e-04
118	RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4	43	6e-04
119	RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
120	RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
121	RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
122	RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
123	RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
124	RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
125	RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4	43	7e-04
126	RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
127	RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
128	RS4_LACAC (Q5FKX2) 30S ribosomal protein S4	43	7e-04
129	RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4	43	7e-04
130	RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4	43	7e-04
131	RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
132	RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
133	RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
134	RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
135	RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
136	RS4_DESPS (Q6AP44) 30S ribosomal protein S4	43	7e-04
137	RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
138	RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
139	RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
140	RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
141	RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
142	RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
143	RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
144	RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
145	RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
146	RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
147	RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
148	RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
149	RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
150	RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
151	RS4_PORGI (Q7MTN9) 30S ribosomal protein S4	43	7e-04
152	RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4	43	7e-04
153	RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4	43	7e-04
154	RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4	43	7e-04
155	RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4	43	7e-04
156	RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4	43	7e-04
157	RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic p...	43	7e-04
158	RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4	43	7e-04
159	RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4	43	7e-04
160	RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4	43	7e-04
161	RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4	43	7e-04
162	RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4	43	7e-04
163	RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4	43	7e-04
164	RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4	42	0.001
165	RS4_BACTN (Q8A4A1) 30S ribosomal protein S4	42	0.001
166	RS4_BACFR (Q64NN4) 30S ribosomal protein S4	42	0.001
167	RS4_BACFN (Q5L8D5) 30S ribosomal protein S4	42	0.001
168	RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4	42	0.001
169	RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4	42	0.001
170	RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4	42	0.001
171	RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4	42	0.001
172	RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4	42	0.001
173	RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4	42	0.001
174	RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
175	RS4_STAAW (P66564) 30S ribosomal protein S4	42	0.001
176	RS4_STAAS (Q6G8K8) 30S ribosomal protein S4	42	0.001
177	RS4_STAAR (Q6GFY8) 30S ribosomal protein S4	42	0.001
178	RS4_STAAN (P66563) 30S ribosomal protein S4	42	0.001
179	RS4_STAAM (P66562) 30S ribosomal protein S4	42	0.001
180	RS4_STAAC (Q5HF54) 30S ribosomal protein S4	42	0.001
181	RS4_STAAB (Q2YTH0) 30S ribosomal protein S4	42	0.001
182	RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4	42	0.001
183	RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4	42	0.001
184	RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4	42	0.001
185	RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4	42	0.001
186	RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4	42	0.001
187	RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4	42	0.001
188	RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4	42	0.001
189	RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4	42	0.001
190	RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4	42	0.001
191	RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
192	RR4_OROMI (O78678) Plastid 30S ribosomal protein S4	42	0.001
193	RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4	42	0.001
194	RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4	42	0.001
195	RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4	42	0.001
196	RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4	42	0.001
197	RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4	42	0.001
198	RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
199	RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4	42	0.001
200	RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4	42	0.001
201	RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4	42	0.002
202	RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4	42	0.002
203	RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4	42	0.002
204	RS4_LEGPA (Q5X835) 30S ribosomal protein S4	42	0.002
205	RS4_GEOSL (Q749B2) 30S ribosomal protein S4	42	0.002
206	RS4_GEOMG (Q39XY0) 30S ribosomal protein S4	42	0.002
207	RS4_GEOKA (Q5KW49) 30S ribosomal protein S4	42	0.002
208	RS4_SYNY3 (P48939) 30S ribosomal protein S4	42	0.002
209	RS4_LACJO (Q74K05) 30S ribosomal protein S4	42	0.002
210	RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.002
211	RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4	41	0.002
212	RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4	41	0.002
213	RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4	41	0.002
214	RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4	41	0.002
215	RS4_PELLD (Q3B6D7) 30S ribosomal protein S4	41	0.002
216	RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)	41	0.002
217	RS4_THETN (Q8R7Y1) 30S ribosomal protein S4	41	0.002
218	RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4	41	0.002
219	RS4_LISMF (Q71Z71) 30S ribosomal protein S4	41	0.002
220	RS4_LISIN (Q92BB2) 30S ribosomal protein S4	41	0.002
221	RS4_NITWN (Q3ST14) 30S ribosomal protein S4	41	0.002
222	RS4_CORGL (Q8NSV4) 30S ribosomal protein S4	41	0.002
223	RS4_COREF (Q8FS34) 30S ribosomal protein S4	41	0.002
224	RS4_CORAM (Q3S664) 30S ribosomal protein S4	41	0.002
225	RS4_TROWT (Q83GC9) 30S ribosomal protein S4	41	0.003
226	RS4_TROW8 (Q83HV1) 30S ribosomal protein S4	41	0.003
227	RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4	41	0.003
228	RS4_IDILO (Q5QXV7) 30S ribosomal protein S4	41	0.003
229	RS4_STAHJ (Q4L760) 30S ribosomal protein S4	41	0.003
230	RS4_STAES (Q8CS54) 30S ribosomal protein S4	41	0.003
231	RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4	41	0.003
232	RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4	41	0.003
233	RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4	41	0.003
234	RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4	41	0.003
235	RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4	41	0.003
236	RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4	41	0.003
237	RS4_LACPL (Q88UX0) 30S ribosomal protein S4	40	0.004
238	RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4	40	0.004
239	RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4	40	0.004
240	RS4_AQUAE (O66484) 30S ribosomal protein S4	40	0.004
241	RR4_EQUSY (Q6H9K4) Chloroplast 30S ribosomal protein S4	40	0.004
242	RR4_EQUPT (Q6H9K7) Chloroplast 30S ribosomal protein S4	40	0.004
243	RR4_EQUPA (Q6H9K8) Chloroplast 30S ribosomal protein S4	40	0.004
244	RR4_EQUFL (Q6H9L3) Chloroplast 30S ribosomal protein S4	40	0.004
245	RR4_EQUAR (Q6H9L6) Chloroplast 30S ribosomal protein S4	40	0.004
246	RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4	40	0.004
247	RS4_CORJK (Q4JTC1) 30S ribosomal protein S4	40	0.004
248	RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4	40	0.005
249	RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4	40	0.005
250	RS4B_CLOAB (Q97J08) Putative 30S ribosomal protein S4 B	40	0.005
251	RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)	40	0.005
252	RS4_OCEIH (P59130) 30S ribosomal protein S4	40	0.005
253	RS4_BACHK (Q6HCM2) 30S ribosomal protein S4	40	0.005
254	RS4_BACCZ (Q633E0) 30S ribosomal protein S4	40	0.005
255	RS4_BACCR (Q817A4) 30S ribosomal protein S4	40	0.005
256	RS4_BACC1 (Q72Z76) 30S ribosomal protein S4	40	0.005
257	RS4_BACAN (Q81KT2) 30S ribosomal protein S4	40	0.005
258	RR4_EQUBO (Q6H9L5) Chloroplast 30S ribosomal protein S4	40	0.005
259	RS4_THIDA (Q3SLM5) 30S ribosomal protein S4	40	0.005
260	RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4	40	0.005
261	RS4_CORDI (Q6NJ64) 30S ribosomal protein S4	40	0.005
262	RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4	40	0.005
263	RR4_PSEAK (Q3ZJ39) Chloroplast 30S ribosomal protein S4	40	0.006
264	RR4_CHAGL (Q8M9W2) Chloroplast 30S ribosomal protein S4	40	0.006
265	RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4	40	0.006
266	RR4_CYAPA (P48133) Cyanelle 30S ribosomal protein S4	40	0.006
267	RS4B_CLOPE (Q8XHW7) Putative 30S ribosomal protein S4 B	40	0.006
268	RS4_RHOPA (Q6N9G0) 30S ribosomal protein S4 (RRP-S4)	40	0.006
269	RS4_DESVH (Q72CF5) 30S ribosomal protein S4	40	0.006
270	RR4_ASTLO (P58134) Plastid 30S ribosomal protein S4	40	0.006
271	RS4_SYNEL (P59134) 30S ribosomal protein S4	40	0.006
272	RR4_JAMAU (Q9M4B8) Chloroplast 30S ribosomal protein S4	40	0.006
273	RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)	40	0.006
274	RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4	39	0.008
275	RS4_MYCPU (Q98PK6) 30S ribosomal protein S4	39	0.008
276	RS4_STAS1 (Q49YF2) 30S ribosomal protein S4	39	0.008
277	RS4_BACLD (Q65G42) 30S ribosomal protein S4	39	0.008
278	RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4	39	0.008
279	RR4_EUGGR (P27418) Chloroplast 30S ribosomal protein S4	39	0.008
280	RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4	39	0.011
281	RS4_LACSS (Q38XD6) 30S ribosomal protein S4	39	0.011
282	RS4_THET8 (P80373) 30S ribosomal protein S4	39	0.011
283	RS4_THET2 (P62664) 30S ribosomal protein S4	39	0.011
284	RS4_THEFY (Q47R66) 30S ribosomal protein S4	39	0.011
285	RR4_TAKLE (P59150) Chloroplast 30S ribosomal protein S4	39	0.011
286	RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4	39	0.011
287	RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4	39	0.014
288	RS4_ANAVT (Q3M534) 30S ribosomal protein S4	39	0.014
289	RS4_ANASP (Q8YTI0) 30S ribosomal protein S4	39	0.014
290	RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)	39	0.014
291	RS4_LEPIN (Q9XD10) 30S ribosomal protein S4	39	0.014
292	RS4_LEPIC (Q72NI7) 30S ribosomal protein S4	39	0.014
293	RR4_PROWI (O47032) Plastid 30S ribosomal protein S4	39	0.014
294	RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4	38	0.018
295	RS4_NEIMB (P66561) 30S ribosomal protein S4	38	0.018
296	RS4_NEIMA (P66560) 30S ribosomal protein S4	38	0.018
297	RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4	38	0.018
298	RS4_NOCFA (Q5Z1L0) 30S ribosomal protein S4	38	0.024
299	RS4_MANSM (Q65QX9) 30S ribosomal protein S4	38	0.024
300	RS4_NITOC (Q3J8T7) 30S ribosomal protein S4	38	0.024
301	RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4	38	0.024
302	RS4_PSEHT (Q3IJJ5) 30S ribosomal protein S4	37	0.031
303	RS4_HAEIN (P44373) 30S ribosomal protein S4	37	0.041
304	RS4_PROAC (Q6A6R0) 30S ribosomal protein S4	37	0.041
305	RS4_MYCTU (O06325) 30S ribosomal protein S4	37	0.041
306	RS4_SILPO (Q5LNM2) 30S ribosomal protein S4	37	0.041
307	RS4_PASMU (Q9CL53) 30S ribosomal protein S4	37	0.041
308	RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4	37	0.041
309	RS4_COLP3 (Q488Y9) 30S ribosomal protein S4	37	0.041
310	RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4	37	0.041
311	RS4_MYCBO (P45811) 30S ribosomal protein S4	37	0.041
312	RS4_CHLTE (P59129) 30S ribosomal protein S4	37	0.041
313	RS4_STRT2 (Q5M255) 30S ribosomal protein S4	37	0.053
314	RS4_STRT1 (Q5LXK5) 30S ribosomal protein S4	37	0.053
315	RS4_PSEF5 (Q4K556) 30S ribosomal protein S4	37	0.053
316	RS4_NITMU (Q2YAX3) 30S ribosomal protein S4	37	0.053
317	RS4_HELHP (Q7VGC0) 30S ribosomal protein S4	37	0.053
318	RS4_BIFLO (P59127) 30S ribosomal protein S4	37	0.053
319	RS4_DEHSC (Q3ZZP7) 30S ribosomal protein S4	37	0.053
320	RS4_DEHE1 (Q3Z954) 30S ribosomal protein S4	37	0.053
321	RS4_MYCLE (Q9X799) 30S ribosomal protein S4	37	0.053
322	RS4_BRAJA (Q89ID3) 30S ribosomal protein S4	36	0.070
323	RS4_BACSK (Q5WEB9) 30S ribosomal protein S4	36	0.070
324	RS4_STRMU (P59133) 30S ribosomal protein S4	36	0.091
325	RS4_LACLA (Q9CIS2) 30S ribosomal protein S4	36	0.091
326	RS4_COXBU (Q83EQ3) 30S ribosomal protein S4	36	0.091
327	RS4_CLOTE (Q890Q9) 30S ribosomal protein S4	36	0.091
328	RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4	36	0.091
329	RS4_WIGBR (Q8D1Y9) 30S ribosomal protein S4	36	0.091
330	RS4_PSEPF (Q3K611) 30S ribosomal protein S4	35	0.12
331	RS4_CAUCR (Q9A5D9) 30S ribosomal protein S4	35	0.12
332	RS4_THEMA (Q9X1I3) 30S ribosomal protein S4	35	0.16
333	RS4_AZOSE (Q5P308) 30S ribosomal protein S4	35	0.16
334	RS4_MYCS5 (Q4A5T4) 30S ribosomal protein S4	35	0.16
335	RS4_THICR (Q31IV9) 30S ribosomal protein S4	35	0.16
336	RS4_MESFL (Q6F0M9) 30S ribosomal protein S4	35	0.16
337	RS4_MYCHJ (Q4A9B0) 30S ribosomal protein S4	35	0.16
338	RS4_MYCH7 (Q4A7F0) 30S ribosomal protein S4	35	0.16
339	RS4_MYCH2 (Q5ZZW4) 30S ribosomal protein S4	35	0.16
340	RS4_MYCPA (Q73S44) 30S ribosomal protein S4	35	0.16
341	RS4_MYCGA (Q7NAV0) 30S ribosomal protein S4	35	0.16
342	RS4_DECAR (Q47J78) 30S ribosomal protein S4	35	0.20
343	RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4	35	0.20
344	RS4_VIBVU (Q8DE62) 30S ribosomal protein S4	35	0.20
345	RS4_HELPY (P56011) 30S ribosomal protein S4	35	0.20
346	RS4_HELPJ (Q9ZJT4) 30S ribosomal protein S4	35	0.20
347	RS4_DESDG (Q30Z67) 30S ribosomal protein S4	35	0.20
348	RS4_BORGA (Q660Q7) 30S ribosomal protein S4	35	0.20
349	RS4_GLUOX (Q5FQ27) 30S ribosomal protein S4	35	0.20
350	RS4_DEIRA (Q9RSJ7) 30S ribosomal protein S4	35	0.20
351	RS4_STRR6 (P66566) 30S ribosomal protein S4	34	0.26
352	RS4_STRPN (P66565) 30S ribosomal protein S4	34	0.26
353	RS4_STRPM (Q48QN5) 30S ribosomal protein S4	34	0.26
354	RS4_STRP8 (P66569) 30S ribosomal protein S4	34	0.26
355	RS4_STRP6 (Q5X9C7) 30S ribosomal protein S4	34	0.26
356	RS4_STRP3 (P66568) 30S ribosomal protein S4	34	0.26
357	RS4_STRP1 (P66567) 30S ribosomal protein S4	34	0.26
358	RS4_STRA5 (Q8DWS6) 30S ribosomal protein S4	34	0.26
359	RS4_STRA3 (Q8E2M6) 30S ribosomal protein S4	34	0.26
360	RS4_STRA1 (Q3JYG8) 30S ribosomal protein S4	34	0.26
361	RS4_BORBU (O51560) 30S ribosomal protein S4	34	0.26
362	RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4	34	0.26
363	RS4_PSEU2 (Q4ZMR7) 30S ribosomal protein S4	34	0.26
364	RS4_PSESM (Q889U7) 30S ribosomal protein S4	34	0.26
365	RS4_PSE14 (Q48D60) 30S ribosomal protein S4	34	0.26
366	RS4_GLOVI (Q7NFF4) 30S ribosomal protein S4	34	0.26
367	RS4_BUCAP (P41186) 30S ribosomal protein S4	34	0.26
368	YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Frag...	34	0.26
369	RS4_VIBCH (Q9KP07) 30S ribosomal protein S4	34	0.35
370	RS4_PSEAE (O52759) 30S ribosomal protein S4	34	0.35
371	RS4_XYLFA (Q9PE53) 30S ribosomal protein S4	34	0.35
372	RS4_VIBF1 (Q5E890) 30S ribosomal protein S4	33	0.45
373	RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4	33	0.45
374	RS4_SHEON (P59131) 30S ribosomal protein S4	33	0.45
375	RS4_PSEPK (Q88QL2) 30S ribosomal protein S4	33	0.45
376	RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4	33	0.59
377	RS4_PHOPR (Q6LV92) 30S ribosomal protein S4	33	0.77
378	RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4	32	1.0
379	RS4_TREPA (O83328) 30S ribosomal protein S4	32	1.3
380	RS4_RHOS4 (Q3J446) 30S ribosomal protein S4	32	1.3
381	BUB1B_HUMAN (O60566) Mitotic checkpoint serine/threonine-protein...	32	1.7
382	RS4_RHOBA (Q7UXM6) 30S ribosomal protein S4	31	2.9
383	RS4_BUCBP (P59491) 30S ribosomal protein S4	31	2.9
384	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	30	6.5
385	RT04_MARPO (P26866) Mitochondrial ribosomal protein S4	29	8.5
386	MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich...	29	8.5

---

>RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)|
          Length = 190

 Score =  190 bits (483), Expect = 2e-48
 Identities = 95/128 (74%), Positives = 112/128 (87%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+P+R+FEG AL+RR+ R G+L E + KLDYVLAL AE+FL RRLQTL
Sbjct: 51  RRAARELLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTL 110

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           V+K G+AKSIHHARVLIRQRHIRVG+QIVNVPSF+VR++S+KHIDF+LTSPFGGG  GRV
Sbjct: 111 VYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRV 170

Query: 217 KRKNQKKA 194
           +RK  K A
Sbjct: 171 RRKKAKAA 178

---

>RS9_RAT (P29314) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (476), Expect = 1e-47
 Identities = 93/127 (73%), Positives = 109/127 (85%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT 
Sbjct: 53  RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 112

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRV
Sbjct: 113 VFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 172

Query: 217 KRKNQKK 197
           KRKN KK
Sbjct: 173 KRKNAKK 179

---

>RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (476), Expect = 1e-47
 Identities = 93/127 (73%), Positives = 109/127 (85%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT 
Sbjct: 53  RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 112

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRV
Sbjct: 113 VFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 172

Query: 217 KRKNQKK 197
           KRKN KK
Sbjct: 173 KRKNAKK 179

---

>RS9_HUMAN (P46781) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (476), Expect = 1e-47
 Identities = 93/127 (73%), Positives = 109/127 (85%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT 
Sbjct: 53  RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 112

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRV
Sbjct: 113 VFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 172

Query: 217 KRKNQKK 197
           KRKN KK
Sbjct: 173 KRKNAKK 179

---

>RS9_DROME (P55935) 40S ribosomal protein S9|
          Length = 195

 Score =  181 bits (459), Expect = 1e-45
 Identities = 91/127 (71%), Positives = 107/127 (84%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+ +R+F+G ALLRR+ R G+L E + KLDYVL L  E+FL RRLQT 
Sbjct: 55  RKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQ 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SPFGGG  GRV
Sbjct: 115 VFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRV 174

Query: 217 KRKNQKK 197
           KRKN KK
Sbjct: 175 KRKNLKK 181

---

>RS9B_SCHPO (O59675) 40S ribosomal protein S9-B|
          Length = 191

 Score =  176 bits (447), Expect = 3e-44
 Identities = 87/123 (70%), Positives = 106/123 (86%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT 
Sbjct: 52  RRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQ 111

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLI QRHIRVG+QIVNVPSF+VR++++KHIDF+L+SP+GGG  GR 
Sbjct: 112 VFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRC 171

Query: 217 KRK 209
           KRK
Sbjct: 172 KRK 174

---

>RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A|
          Length = 190

 Score =  176 bits (445), Expect = 6e-44
 Identities = 87/123 (70%), Positives = 106/123 (86%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT 
Sbjct: 52  RRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQ 111

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLI QRHIRVG+QIVNVPSF+VR++++KHIDF+L+SP+GGG  GR 
Sbjct: 112 VFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRC 171

Query: 217 KRK 209
           KRK
Sbjct: 172 KRK 174

---

>RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28)|
          Length = 196

 Score =  175 bits (443), Expect = 1e-43
 Identities = 86/124 (69%), Positives = 104/124 (83%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLT DEK+P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT 
Sbjct: 52  RRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQ 111

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           V+K G+AKS+HHARVLI QRHI VG+QIVN+PSFMVR++SEKHIDF+ TSPFGG   GRV
Sbjct: 112 VYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRV 171

Query: 217 KRKN 206
            R+N
Sbjct: 172 ARRN 175

---

>RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28)|
          Length = 194

 Score =  175 bits (443), Expect = 1e-43
 Identities = 86/124 (69%), Positives = 104/124 (83%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLT DEK+P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT 
Sbjct: 52  RRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQ 111

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           V+K G+AKS+HHARVLI QRHI VG+QIVN+PSFMVR++SEKHIDF+ TSPFGG   GRV
Sbjct: 112 VYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRV 171

Query: 217 KRKN 206
            R+N
Sbjct: 172 ARRN 175

---

>RS9_CAEEL (Q20228) 40S ribosomal protein S9|
          Length = 189

 Score =  171 bits (434), Expect = 1e-42
 Identities = 84/127 (66%), Positives = 106/127 (83%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTL++K+P+R+FEG ALLRR+ + G+L E + KLDYVL L  E+FL RRLQT 
Sbjct: 53  RKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQ 112

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHAR+LI+Q HIRV RQ+V+VPSF+VR++S+KHIDFSL SP+GGG  GRV
Sbjct: 113 VFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRV 172

Query: 217 KRKNQKK 197
           KR+  +K
Sbjct: 173 KRRTLRK 179

---

>RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal protein 1024)|
           (Vegetative-specific protein V12)
          Length = 185

 Score =  167 bits (424), Expect = 2e-41
 Identities = 82/129 (63%), Positives = 104/129 (80%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LL LDEK+P+RIFEG+ALLRR+++ G++ E ++KLDY+L L  ++F+ RRLQTL
Sbjct: 50  RKAARELLVLDEKDPKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTL 109

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKSIHHARVLI+ RHIRVG+Q+VNVPSF+VRVES+KH+  + TSP  GG  GR 
Sbjct: 110 VFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRR 169

Query: 217 KRKNQKKAS 191
            RK  K  S
Sbjct: 170 ARKMAKNNS 178

---

>RS9_TRYBB (P17959) Probable 40S ribosomal protein S9|
          Length = 190

 Score =  156 bits (394), Expect = 5e-38
 Identities = 78/128 (60%), Positives = 97/128 (75%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR LLTL E +PRR+ EG+A++RR + YG L E +DKLDYVL+LT  + L RRLQT+
Sbjct: 52  RRTARLLLTLPENHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTV 111

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           VFK G+AKS+HH+RVLI+QRHI V +QIV +PSF+VRV SE HI F+  SPFG G  GRV
Sbjct: 112 VFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRV 171

Query: 217 KRKNQKKA 194
           KR  +  A
Sbjct: 172 KRVKRNAA 179

---

>RS9_NAEFO (Q25555) 40S ribosomal protein S9|
          Length = 186

 Score =  147 bits (372), Expect = 2e-35
 Identities = 79/127 (62%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  ARHLLTL E + +R FEGAALLRRM R GLL E + +LDY+L+L  E+ L RRLQT+
Sbjct: 55  RKTARHLLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTV 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFS-LTSPFGGGPAGR 221
           V K G++KSIHHAR LI QRHIRVG+Q VNVPSF+VRV+SEKHI+ S  ++   GG  GR
Sbjct: 115 VQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGR 174

Query: 220 VKRKNQK 200
           + RK  K
Sbjct: 175 MTRKKLK 181

---

>RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)|
          Length = 77

 Score =  112 bits (280), Expect = 8e-25
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = -3

Query: 379 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKNQK 200
           AKS+HHARVLIRQRHIRVGRQ+VNVPSFMVR++S+KHIDFSL SPFGGG  GRVKRKNQK
Sbjct: 1   AKSVHHARVLIRQRHIRVGRQVVNVPSFMVRLDSQKHIDFSLISPFGGGRPGRVKRKNQK 60

Query: 199 KAS 191
            A+
Sbjct: 61  AAA 63

---

>RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)|
          Length = 144

 Score =  110 bits (275), Expect = 3e-24
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  A+ +L  D K+P+R+ EGAALLRR++  G+L   Q+KL++VLAL  EN L RRLQTL
Sbjct: 49  RTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTL 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           V++ G  KSIHHARVLIR + I+ G+Q+  VPSF+V
Sbjct: 109 VYRKGFGKSIHHARVLIRGKMIKAGKQVGGVPSFLV 144

---

>RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)|
          Length = 130

 Score =  109 bits (273), Expect = 5e-24
 Identities = 56/79 (70%), Positives = 64/79 (81%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT 
Sbjct: 52  RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQ 111

Query: 397 VFKAGMAKSIHHARVLIRQ 341
           VFK G+A SIHH RVLIRQ
Sbjct: 112 VFKLGLAXSIHHXRVLIRQ 130

---

>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 51/112 (45%), Positives = 65/112 (58%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR LL    K      E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+
Sbjct: 52  RRRARRLLAARGKQAE--IEREQLLSRLKRLGLLPEDA-VLDDVLSLTVEDILERRLQTI 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           V+K G+A+++  AR LI   HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 109 VYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEEEDKITYARTSPF 160

---

>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 51/112 (45%), Positives = 65/112 (58%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR LL    K      E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+
Sbjct: 52  RRRARRLLAARGKQAE--IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTI 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           V+K G+A+++  AR LI   HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 109 VYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEEEDTITYARTSPF 160

---

>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 51/112 (45%), Positives = 65/112 (58%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR LL    K      E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+
Sbjct: 52  RRRARRLLAARGKQAE--IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTI 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           V+K G+A+++  AR LI   HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 109 VYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEEEDTITYARTSPF 160

---

>RS4_METJA (P54020) 30S ribosomal protein S4P|
          Length = 187

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 46/112 (41%), Positives = 65/112 (58%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR L++  ++  +   E   L   + +YG+L      LD VL+LT E+ L RRLQTL
Sbjct: 53  RRQARRLIS--DRTEQGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTL 110

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           VF+ G+A++   AR LI   HI V  ++V  PS+MV VE E  I ++  SPF
Sbjct: 111 VFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEEEDKISYAKNSPF 162

---

>RS4_SULAC (P39467) 30S ribosomal protein S4P|
          Length = 176

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
 Frame = -3

Query: 577 RNAARHLLTLD--EKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 404
           R+ AR LL L   E+N R       L++++ R G+L +    LD +L+LT EN+L RRLQ
Sbjct: 52  RHQARSLLALPPAERNIRE----KQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQ 107

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGP 230
           T+V+K G+A++I+ AR LI   HI +  + V  P ++V    E  ID+  TSPF   P
Sbjct: 108 TIVYKKGLARTIYQARQLITHGHIAISGRKVTSPGYVVLRGEEDLIDYYPTSPFKQNP 165

---

>RS4_SULTO (Q96YV8) 30S ribosomal protein S4P|
          Length = 177

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 48/128 (37%), Positives = 72/128 (56%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R+ AR LL L      R      L++++ R G++ +    LD +L L  EN+L RRLQT+
Sbjct: 52  RHQARSLLALPPAE--RSTREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTI 109

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRV 218
           V+K G+A++I+ AR LI   HI +G + V  P ++V    E  IDF  TSPF   P  + 
Sbjct: 110 VYKKGLARTIYQARQLIVHGHIAIGGRRVTSPGYIVMRGEEDLIDFYPTSPFKQHPPTQQ 169

Query: 217 KRKNQKKA 194
             +N ++A
Sbjct: 170 GEENVQQA 177

---

>RS4_METKA (Q8TVC0) 30S ribosomal protein S4P|
          Length = 186

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK--LDYVLALTAENFLARRLQ 404
           R  A+ L+   +   +R  E  AL R++   G+L +  ++  LD +L LT E+ L RRLQ
Sbjct: 52  RERAKELMARTDPEAQR--EREALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQ 109

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           T+V++ G+AK+   AR L+  RHI +G +IV VPS++V  E E+ +D+S  SP
Sbjct: 110 TIVYRKGLAKTPLQARQLVVHRHIAIGDRIVTVPSYLVSREEEEEVDYSPYSP 162

---

>RS4_AERPE (Q9YB58) 30S ribosomal protein S4P|
          Length = 171

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 44/112 (39%), Positives = 63/112 (56%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R+ AR LL L  +  R       L+  + R GL+      +D VL + AE  L RRLQT+
Sbjct: 52  RHRARSLLGLPPEVRREA--SRVLVESLYRMGLIDNPNVDIDEVLGINAEKVLERRLQTI 109

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           V+K G+AK+I+ AR L+   HI +  + V  P ++V  E EK ID++  SPF
Sbjct: 110 VYKKGLAKTIYQARQLVVHGHIAIAGRRVTSPGYLVSREEEKLIDYAPGSPF 161

---

>RS4_THEVO (Q97B95) 30S ribosomal protein S4P|
          Length = 200

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
 Frame = -3

Query: 577 RNAARHL---LTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 407
           R+ AR+L   L   + N ++  E   +++R++RY +L++ +  LD VL+LT EN L RRL
Sbjct: 52  RSQARYLRARLRASDANAQKQLE--RMIKRLSRYKILSD-KATLDDVLSLTVENILDRRL 108

Query: 406 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGG--- 236
           QT+VFK  +A S   AR LI   HI V  + V VP  +V  + E  I +   SP      
Sbjct: 109 QTIVFKKNLALSEKQARQLITHGHITVNGRRVTVPGMLVEAQYEDTIAYYENSPIANELH 168

Query: 235 -------GPAGRVKRKNQKKAS 191
                   PA RVK + +K+A+
Sbjct: 169 PIRQALLSPAERVKEEAEKEAA 190

---

>RS4_SULSO (P95987) 30S ribosomal protein S4P|
          Length = 181

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 43/116 (37%), Positives = 66/116 (56%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R+ AR LL L      R      L+ ++ + GLL +    +D +L+LT ++ L RRLQT+
Sbjct: 52  RHQARSLLALPPAE--RAVREKQLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQTI 109

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGP 230
           V+K G++ +I+ AR LI   HI V  + V  P ++V V+ E  ID+ +TS F   P
Sbjct: 110 VYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRP 165

---

>RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P|
          Length = 199

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = -3

Query: 577 RNAARHL---LTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 407
           R+ AR L   L  ++ N ++  E   +++R+NRY LL+E    LD VL+LT EN L RRL
Sbjct: 52  RSQARDLRARLRTNDVNAQKQLE--RMIKRLNRYKLLSENAT-LDDVLSLTVENILDRRL 108

Query: 406 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           QT+VF+  +A S+  AR LI   HI V  + V VP  +V  + E  I +   SP
Sbjct: 109 QTIVFRKNLAISVRQARQLITHGHISVAGRRVTVPGMLVEAKDEDTIAYEENSP 162

---

>RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P|
          Length = 180

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 46/112 (41%), Positives = 63/112 (56%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR LL    K      E   LL+R+ R GLL      LD VL+LT E+ L RRLQT+
Sbjct: 52  RRRARRLLAARGKQAE--IERQQLLQRLYRLGLLP-ADAVLDDVLSLTVEDVLERRLQTI 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           V++ G+A+++  AR LI   HI V  Q++  P ++V  E E  I ++  SPF
Sbjct: 109 VYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLVLREEEDTITYAKGSPF 160

---

>RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P|
          Length = 183

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 577 RNAARHLLT-LDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQT 401
           R  AR L   L   +P  I +   L+ +++R  LL E    LD VL+L  E+ L RRL+T
Sbjct: 52  RTQARTLQAKLRYNDPLAIKQFQLLIGKLSRLNLLGENAT-LDDVLSLNIEDILERRLET 110

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 242
           LV+K  +A ++  AR  I   HI+V  ++V +PSFMV    E  I ++ TSPF
Sbjct: 111 LVYKKNLALTMKQARQFITHGHIKVNDRVVTIPSFMVEKSMEDSITYNETSPF 163

---

>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEG------AALLRRMNRYGLLAEGQDKLDYVLALTAENFLA 416
           R+ AR LL     +  R  EG        +L ++ RYG++    D +D +L+L  EN L 
Sbjct: 52  RSEARRLLASAANSQERGLEGHQKTQSEEILAKLIRYGIIKSDAD-IDDILSLKTENILE 110

Query: 415 RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           RRLQT V + G+A+++  AR  I   HI +  +   VP  +V  E E HI +  TSP
Sbjct: 111 RRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATVPGMLVSKEDEMHIGYYATSP 167

---

>RS4_ARCFU (O28000) 30S ribosomal protein S4P|
          Length = 172

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 37/88 (42%), Positives = 55/88 (62%)
 Frame = -3

Query: 508 LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIR 329
           +++++N+ G+L E    LD +L L+ E+FL RRLQT+V++ G+A++I  AR  I   HI 
Sbjct: 79  VIKKLNKMGILPENAT-LDDILNLSVEDFLERRLQTMVYRQGLARTIKQARQFITHGHIA 137

Query: 328 VGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           V  + V  PSF+V  E E  I F   SP
Sbjct: 138 VDGRRVTSPSFIVTKELESKISFYRNSP 165

---

>RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P|
          Length = 180

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
 Frame = -3

Query: 520 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 341
           E    L ++ + G+L+E  + LD VL LT ++ L RRLQT++ + G+AK++  AR  I  
Sbjct: 68  EKERFLTKLKKLGVLSENAE-LDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFIVH 126

Query: 340 RHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGG--GPAGRVKRKNQ 203
            HI V  ++V+ PS++V+ E E  I+F   SP      PA ++++K +
Sbjct: 127 GHIMVNGEVVDAPSYLVKKEEEDKIEFVPFSPLANPEHPARKLEQKEE 174

---

>RS4_METMP (Q6LXN0) 30S ribosomal protein S4P|
          Length = 178

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 35/92 (38%), Positives = 52/92 (56%)
 Frame = -3

Query: 520 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 341
           E   L   + RY +L E +  LD+VL+L  E+ L RRLQT+VF+ G+AK+   AR  I  
Sbjct: 69  EAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVH 128

Query: 340 RHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
            HI V  + V  P++++ V     I++   SP
Sbjct: 129 GHIAVNGKRVTAPAYLISVAENDAIEYVSNSP 160

---

>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 42/111 (37%), Positives = 65/111 (58%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR+LL +  ++  +  E   LL  + R G+L EG  KL+ VL LT E+ L RRLQTL
Sbjct: 52  RRDARYLLGMASEHTGK--EREQLLGHLVRTGILNEGA-KLEDVLDLTVEDVLRRRLQTL 108

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           V K G+A+++  AR ++   HI +  + ++ P ++V+   E  I F  +SP
Sbjct: 109 VHKRGLARTVKEARQMVIHGHIALDGRKIDAPGYIVKRGEEDKIGFYPSSP 159

---

>RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P|
          Length = 159

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = -3

Query: 568 ARHLL--TLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLV 395
           AR LL  T +E+ P  +        ++ + G + +   +LD +L+L     L RRLQT+V
Sbjct: 57  ARSLLSMTAEERAPLEM----PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIV 112

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           ++ G+AKSIHHAR LI   H+ V  + V  P F+V  E E  I
Sbjct: 113 YRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLVPRELEDKI 155

---

>RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P|
          Length = 174

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQR 338
           G+  L R+ R G+L + +D LD +L+L   + L RRLQT+ ++ G+  +   AR  I   
Sbjct: 72  GSEFLARLKRIGVL-DDEDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQFIAHG 130

Query: 337 HIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           H+ V    V+ PS+ V V  E  I+F  TSP
Sbjct: 131 HVTVNGARVSAPSYKVDVAEEGEIEFDETSP 161

---

>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAE--GQDKLDYVLALTAENFLARRLQ 404
           R  AR L  L E++P R+   AALL ++   GL+     Q+  D+V   TA +F  RRL 
Sbjct: 56  RELARRLRDLPERDPFRVRSSAALLDKLYALGLVPTRGSQELCDFV---TASSFCRRRLP 112

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           T++ K  MA+ +  A   + Q H+RVG  +V  P+F+V    E  +
Sbjct: 113 TVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFV 158

---

>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 36/104 (34%), Positives = 57/104 (54%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR L  L E++P R+   AALL ++   GL+   +  L+   +++A +F  RRL TL
Sbjct: 56  RELARRLRDLPERDPFRVRASAALLDKLYAMGLVPT-RGSLELCDSVSASSFCRRRLPTL 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           + K  MA+ +  A   + Q H+RVG  +V  P+F+V    E  +
Sbjct: 115 LLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFV 158

---

>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = -3

Query: 508 LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIR 329
           +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++  AR  I   HI 
Sbjct: 81  ILSKLIRYGII-KSDANIDDILSLKTENILERRLQTQVLRLGLARTVIQARQFITHGHIA 139

Query: 328 VGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           +  +   +P  +V  E E HI +   SP
Sbjct: 140 INGRKATIPGMLVSKEDEMHIGYYGNSP 167

---

>RS4_METMA (Q8PV18) 30S ribosomal protein S4P|
          Length = 219

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 51/88 (57%)
 Frame = -3

Query: 508 LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIR 329
           +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++  AR  I   HI 
Sbjct: 82  ILSKLIRYGII-KADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQFITHGHIA 140

Query: 328 VGRQIVNVPSFMVRVESEKHIDFSLTSP 245
           +  +   +P  +V  E E HI +  +SP
Sbjct: 141 INGRKATIPGMLVSKEDEMHIGYYGSSP 168

---

>RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P|
          Length = 170

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQR 338
           G   + R+ R G+L+E +++LD VL+L   + L RRLQT+V++ G+A ++  AR  +   
Sbjct: 67  GEEFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHG 125

Query: 337 HIRVGRQIVNVPSFMVRVESEKHIDFSLTS 248
           H+ V    V  PS+ V V  E  + F  TS
Sbjct: 126 HVTVDGSRVTEPSYTVPVSEENTLAFDETS 155

---

>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 35/104 (33%), Positives = 55/104 (52%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  AR L  L E++  R+   AALL ++   GL+   +  L+    +TA +F  RRL T+
Sbjct: 56  RELARRLRDLPERDQFRVRASAALLDKLYALGLVPT-RGSLELCDFVTASSFCRRRLPTV 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           + K  MA+ +  A   + Q H+RVG  +V  P+F+V    E  +
Sbjct: 115 LLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFV 158

---

>RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)|
          Length = 171

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = -3

Query: 520 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 341
           E    L R+ RYG+L E QD+LD VL+L   + L RRLQT+V++ G A +   AR  I  
Sbjct: 67  ESEEFLARLKRYGILNE-QDQLDDVLSLDVTDVLERRLQTVVYRKGYANTPEQARQFIVH 125

Query: 340 RHIRVGRQIVNVPSFMVRVESEKHIDF 260
            HI +    V  P   V    E  + F
Sbjct: 126 GHIVLDDARVTRPGMTVETAVESSVGF 152

---

>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 34/110 (30%), Positives = 55/110 (50%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  A  +  L E +P R      +L +    GL+    D L+ +  +T  +F  RRL  +
Sbjct: 55  REVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTS-DTLERIGKVTGASFARRRLPVV 113

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTS 248
           +   GM +S+  A  L+ Q H+R+G ++V  P+FMV   SE  I ++  S
Sbjct: 114 MRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMITWTKAS 163

---

>RS4_PELCD (Q3A6M1) 30S ribosomal protein S4|
          Length = 209

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = -3

Query: 502 RRMNR-YGLLAEGQ----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 347
           +RM R YGLL +      DK D +  +T EN L    RRL + V++ G A S    R L+
Sbjct: 61  QRMKRTYGLLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALV 120

Query: 346 RQRHIRVGRQIVNVPSFMVR 287
           RQ H  V  + VN+PS+++R
Sbjct: 121 RQGHFLVNGRKVNIPSYVMR 140

---

>RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 281
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+  + E
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 134

---

>RS4_FUSNN (Q8RE43) 30S ribosomal protein S4|
          Length = 195

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 31/98 (31%), Positives = 50/98 (51%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  A+ +  + EK  R+I+E AA  R++               V  LT   +L RRL+ +
Sbjct: 50  KQKAKFIYNVMEKQFRKIYEEAA--RKLG--------------VTGLTLIEYLERRLENV 93

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           V++ G AK+   AR ++   HI V  + VN+ SF V+V
Sbjct: 94  VYRLGFAKTRRQARQIVSHGHIAVNGRRVNIASFRVKV 131

---

>RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -3

Query: 427 NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           N L  RL  +V +AG+A +I  +R L+  +HI V  +IVN+PSF   +    H+
Sbjct: 86  NLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVNNKIVNIPSFQCSIGDTIHV 139

---

>RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A|
          Length = 207

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 31/97 (31%), Positives = 49/97 (50%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R    + + L EK   R + G  L R+  RY  +A  +  +   + L     L RRL  +
Sbjct: 48  RKPTEYAIQLREKQKARRYYGV-LERQFERYFEMASRKKGVTGEVLLQT---LERRLDNV 103

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           V++ G A S   AR +++  HI V  + VN+PS++VR
Sbjct: 104 VYRMGFAASRAEARQIVKHSHIEVNGRKVNIPSYLVR 140

---

>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 30/110 (27%), Positives = 49/110 (44%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  A  L  LD  +P R+     LL ++   G+L       D            RRL  +
Sbjct: 55  RQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGILPSKSKMSDIENKANVSAICRRRLPVI 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTS 248
           + K  M++ +  A  LI Q H+RVG  ++  P+++V    E  + ++ TS
Sbjct: 115 MCKLRMSQVVSEATRLIEQGHVRVGPHVITDPAYLVTRSLEDFVTWTDTS 164

---

>RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4|
          Length = 208

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLA---RRL 407
           +    + L L EK   +   G  L  +  RY  +AE Q        +T EN L    RRL
Sbjct: 48  KKPTEYALQLREKQKAKRIYGV-LEAQFRRYFEMAERQP------GITGENLLVILERRL 100

Query: 406 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
             +V++ G+A+S   AR L+R     V  + VN+PS++V+V
Sbjct: 101 DNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKV 141

---

>RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V R+IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNRRIVDIPSF 128

---

>RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 129

---

>RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G A  + +    +    +     VL       L  RL  +
Sbjct: 40  KKVSQYCIRLEEKQKLRFHHGLAEQQLLKYVRIARRAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  +HI V  + +NVPS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHKHILVNNRAINVPSY 129

---

>RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPSY 129

---

>RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    R++ +Y  +A G       ++L +      RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITE-RQLLKYVRIARGAKGSTGQISLQSSEM---RLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ G+A +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 129

---

>RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 39  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQILL----QLLEMRLDNI 94

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KHIDF 260
           VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+IDF
Sbjct: 95  VFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDF 154

Query: 259 SLTS 248
           S  S
Sbjct: 155 SQKS 158

---

>RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 39  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQVLL----QLLEMRLDNI 94

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KHIDF 260
           VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+IDF
Sbjct: 95  VFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKNIDF 154

Query: 259 S 257
           S
Sbjct: 155 S 155

---

>RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNIIFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = -3

Query: 574 NAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLV 395
           N +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++
Sbjct: 40  NKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGPTGQVLL----QLLEMRLDNIL 95

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 96  FRLGMASTIPQARQLVNHRHILVNGRIVDIPSY 128

---

>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 29/104 (27%), Positives = 47/104 (45%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  A  L  L   +P R      LL ++   G+L       D    +T      RRL  +
Sbjct: 55  RRLANKLSLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPVI 114

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 266
           + +  MA++I  A   I Q H+RVG  ++N P+++V    E ++
Sbjct: 115 MHRLKMAETIQDAVKFIEQGHVRVGPNLINDPAYLVTRNMEDYV 158

---

>RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B|
          Length = 205

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = -3

Query: 436 TAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 275
           T    L RRL  +VF+AG A ++  AR L+  RH+R+  + VN+PS  + V  E
Sbjct: 87  TLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDE 140

---

>RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G   L+ +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +    +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARHAKGSTGEILL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNEHIVDIPSY 129

---

>RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVQIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+
Sbjct: 96  LFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 129

---

>RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4|
          Length = 257

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = -3

Query: 424 FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           FL  RL  +VF+  MA +I  AR LI   HIRV  + VN+PS+M +
Sbjct: 107 FLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKVNIPSYMCK 152

---

>RT04_RECAM (O21263) Mitochondrial ribosomal protein S4|
          Length = 249

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           L RRL  ++++AG   SI+ AR+L+  +H+ V  +I N+ S++V+
Sbjct: 131 LERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQ 175

---

>RS4_STRCO (Q9KXP5) 30S ribosomal protein S4|
          Length = 204

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE--------SEKHI 266
           L RRL  LV ++G+A++I+ AR ++   HI+V  Q V+ PSF VR +        S++  
Sbjct: 90  LERRLDALVLRSGIARTIYQARQMVVHGHIQVNGQKVDKPSFRVRPDDVVQVRERSKEKT 149

Query: 265 DFSLTSPFGGGPAGRVKR 212
            F++    G  P G   R
Sbjct: 150 LFTIAREGGFAPDGETPR 167

---

>RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +    +     VL   +E     RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLLQLSE----MRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   +V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYVVDIPSY 129

---

>RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +    +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RS4_STRAW (Q827S7) 30S ribosomal protein S4|
          Length = 204

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
 Frame = -3

Query: 487 YGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVN 308
           Y   A+ Q K    L +  E    RRL  LV ++G+A++I+ AR ++   HI V  Q V+
Sbjct: 72  YERAAKTQGKTGEALVIELE----RRLDALVLRSGIARTIYQARQMVVHGHIEVNGQKVD 127

Query: 307 VPSF--------MVRVESEKHIDFSLTSPFGGGPAGRVKR 212
            PSF        MVR  S +   F +    G  P G   R
Sbjct: 128 KPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAPDGETPR 167

---

>RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 98  LGMASTIPQARQLVNHRHILVNGSIVDIPSY 128

---

>RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLVRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPRARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 28/90 (31%), Positives = 42/90 (46%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL   +F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNTLFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 323
           RR+ R  L   G      VL L     L  RL +LV++AG A +   AR L+   H+ V 
Sbjct: 71  RRLYRVALGRPG------VLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNHSHVLVN 124

Query: 322 RQIVNVPSFMVRVES 278
            + VN+PS +V V S
Sbjct: 125 NKKVNIPSALVEVGS 139

---

>RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGHIVDIPSY 129

---

>RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHMAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR LI  RH+ V   IV++PS+
Sbjct: 98  LGMAATIPQARQLINHRHVLVNGHIVDIPSY 128

---

>RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = -3

Query: 490 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 311
           R G + EGQ  +++++       L RRL ++V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGQHGINFMI------LLERRLDSIVYRLGLATTREQARQLVNHGHITVDGKRV 127

Query: 310 NVPSFMVRV 284
           ++PS+ V V
Sbjct: 128 DIPSYEVSV 136

---

>RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_DESPS (Q6AP44) 30S ribosomal protein S4|
          Length = 210

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
 Frame = -3

Query: 532 RRIFEGAALLRRMNR----YGLLAEGQDKLDYVLA-----LTAENFLA---RRLQTLVFK 389
           +++ + A  LR   +    YG+L E Q +L +  A     +  EN L    RRL   VF+
Sbjct: 49  KKVSDYAVQLREKQKVKSMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVFR 107

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           AG A S   AR ++R +HI +  + V++PS+ V
Sbjct: 108 AGFASSRTQARQIVRHKHILINGKRVDIPSYQV 140

---

>RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 197

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVQIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RS4_PORGI (Q7MTN9) 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -3

Query: 424 FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           FL  RL  +VF+ G+A +   AR L+  RHI V   +VN+PS+ V+
Sbjct: 89  FLEARLDNVVFRLGIAPTRSAARQLVSHRHITVDGSVVNIPSYSVK 134

---

>RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic protein)|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RH+ V   IV++PS+
Sbjct: 98  LGMASTIPQARQLVNHRHVFVNGHIVDIPSY 128

---

>RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4|
          Length = 212

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/94 (26%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           ++ + + + L+EK   R   G    + +    L    +     VL       L  RL  +
Sbjct: 39  KDKSEYRIRLEEKQKLRFHYGITERQLLRYVRLARRAKGSTGQVLL----QLLEMRLDNI 94

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+   H+ V  ++V++PSF
Sbjct: 95  IFRLGMAPTIPAARQLVNHGHVLVNERVVDIPSF 128

---

>RS4_BACTN (Q8A4A1) 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/97 (29%), Positives = 46/97 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  A++   + EK  R +FE AA  + +    LL                  L  RL  +
Sbjct: 54  KQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----------------QLLEGRLDNV 97

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           VF+ G+A +   AR L+  +HI V  ++VN+PSF V+
Sbjct: 98  VFRLGIAPTRAAARQLVSHKHITVDGEVVNIPSFAVK 134

---

>RS4_BACFR (Q64NN4) 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/97 (29%), Positives = 46/97 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  A++   + EK  R +FE AA  + +    LL                  L  RL  +
Sbjct: 54  KQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----------------QMLEGRLDNI 97

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 98  VFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RS4_BACFN (Q5L8D5) 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/97 (29%), Positives = 46/97 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  A++   + EK  R +FE AA  + +    LL                  L  RL  +
Sbjct: 54  KQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----------------QMLEGRLDNI 97

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 98  VFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 98  LGMASTIPQARQLVNHRHILVNGCIVDIPSY 128

---

>RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRLVDIPSY 128

---

>RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHIVDIPSY 121

---

>RS4_STAAW (P66564) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAS (Q6G8K8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAR (Q6GFY8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAN (P66563) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAM (P66562) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAC (Q5HF54) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAB (Q2YTH0) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLV 395
           RH+  ++E+  RRIF  A  +  ++                    ENF   L  RL  LV
Sbjct: 58  RHMYGVNERQFRRIFNDAGKMAGIH-------------------GENFMILLESRLDNLV 98

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           ++ G+A++   AR L+   HI V  Q V++PS+ V+
Sbjct: 99  YRMGLARTRRAARQLVNHGHITVDGQRVDIPSYRVK 134

---

>RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -3

Query: 511 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 395
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -3

Query: 511 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 395
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNIL 98

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -3

Query: 511 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 395
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -3

Query: 511 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 395
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 394 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  TFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           +F+ GM  +I  AR L+  RHI V   IV++PS+  +
Sbjct: 96  IFRLGMFPTIPGARQLVNHRHILVNGPIVDIPSYQCK 132

---

>RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_OROMI (O78678) Plastid 30S ribosomal protein S4|
          Length = 203

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYIRIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 98  LGMALTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNSTVDIPSY 129

---

>RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G A  + +    +  + +     +L       L  RL   
Sbjct: 40  KKVSQYRIRLEEKQKLRSHYGLAERQLLKYMRIARKAKGSTGQILL----QLLEMRLDNT 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM+ +I  AR L+  RHI +   +V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHISINNDVVDIPSY 129

---

>RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNNTVDIPSY 129

---

>RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    +    + +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFNYGLRERQLRKYFSIAIKTRGSTGKVLM----QLLEMRLDNIIFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/94 (24%), Positives = 46/94 (48%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     +L+ T E     RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQILSQTLE----MRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GM+ +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILINDNTVDIPSY 129

---

>RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 184

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4|
          Length = 207

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -3

Query: 439 LTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           LT EN    L  RL  LV +AG A++I  AR  +  RHI V  ++V+ PSF V+
Sbjct: 82  LTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRHILVDGKLVDRPSFRVK 135

---

>RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4|
          Length = 228

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/94 (27%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  +++ + L+EK   R   G    + +    +    +     VL       L  RL  +
Sbjct: 41  RKISQYRIRLEEKQKLRFHYGLTERQLLKYVRVSRRAKGSTGQVLL----QLLEMRLDNI 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+   HIRV   +V++PS+
Sbjct: 97  IFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 130

---

>RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  + V++PS+
Sbjct: 98  LGMASTIPQARQLVNHRHILVNGRTVDIPSY 128

---

>RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -3

Query: 544 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 404
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -3

Query: 544 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 404
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RS4_LEGPA (Q5X835) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -3

Query: 544 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 404
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 403 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RS4_GEOSL (Q749B2) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = -3

Query: 454 DYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  +R
Sbjct: 82  DRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARILVRHNHFTLNGKKANIPSIQLR 140

---

>RS4_GEOMG (Q39XY0) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -3

Query: 463 DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 293
           ++ D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  
Sbjct: 79  EEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARILVRHNHFTLNGRKANIPSIQ 138

Query: 292 VR 287
           ++
Sbjct: 139 LK 140

---

>RS4_GEOKA (Q5KW49) 30S ribosomal protein S4|
          Length = 200

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 21/98 (21%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 401
           G    R+++ YGL  + + KL ++  +                    ENF   L  RL  
Sbjct: 37  GPGQRRKLSEYGLQLQEKQKLRHMYGVNERQFRKTFEEAGKMPGKHGENFMILLESRLDN 96

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           LV++ G+A++   AR L+   HI V    VN+PS+ V+
Sbjct: 97  LVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVK 134

---

>RS4_SYNY3 (P48939) 30S ribosomal protein S4|
          Length = 202

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
 Frame = -3

Query: 550 LDEKNPRRIF---EGAALLRRMNRYGLLAEGQDKLDYVLALTAENF-------------- 422
           L  K+PRR +   +     R+ + Y +  E + KL     +T +                
Sbjct: 21  LSRKSPRRAYPPGQHGQARRKRSEYAIRLEEKQKLRLNYGITEKQLVRYVKKARRATGST 80

Query: 421 -------LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
                  L  RL   VF+ GMA +I  AR L+   HI V  Q+V++PS+  R
Sbjct: 81  GQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGHITVNGQVVDIPSYQCR 132

---

>RS4_LACJO (Q74K05) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = -3

Query: 490 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 311
           R G + EG+  ++++        L RRL  +V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGKHGVNFMA------LLERRLDNIVYRLGLASTREQARQLVNHGHILVDGKRV 127

Query: 310 NVPSFMVRVESE 275
           ++PS+ V+V  E
Sbjct: 128 DIPSYEVKVGQE 139

---

>RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+  RHI V  +I+++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIMDIPSY 121

---

>RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAA---LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 407
           +  +++ + L+EK   R   G     LLR M R    A+G    + +        L  RL
Sbjct: 40  KKPSQYRIRLEEKQKLRYNYGVTEKQLLRYMQR-ARRAKGSSGENLL------QLLEMRL 92

Query: 406 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            T +F+ GMA ++  AR LI   HI V  Q VN+PS+
Sbjct: 93  DTTIFRLGMAPTMLSARQLITHGHILVSEQRVNIPSY 129

---

>RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA ++  AR L+  RHI +   +V++PS+
Sbjct: 96  LFRLGMALTVPGARQLVNHRHILINNSMVDIPSY 129

---

>RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RS4_PELLD (Q3B6D7) 30S ribosomal protein S4|
          Length = 203

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
 Frame = -3

Query: 529 RIFEGAALLRRMNR----YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLVFKA 386
           +I E A  LR   +    YG+L E Q +  Y  A+     T +N    + RRL  +VF+A
Sbjct: 44  KISEYALQLREKQKMKYLYGIL-EKQFRNYYKKAVSQRGVTGDNLVKLIERRLDNVVFRA 102

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           G A S   AR L+   H+ V  + VN+PSF+V
Sbjct: 103 GFAPSRAGARQLVSHSHLLVNGRKVNIPSFLV 134

---

>RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)|
          Length = 199

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 21/98 (21%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 401
           G    R+++ YGL  + + KL ++  +                    ENF   L  RL  
Sbjct: 36  GPGQRRKLSEYGLQLQEKQKLRHMYGVNERQFRKTFEEAGKMPGKHGENFMILLESRLDN 95

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           LV++ G+A++   AR L+   HI V    VN+PS+ V+
Sbjct: 96  LVYRLGLARTRRQARQLVTHGHIIVDGSRVNIPSYRVK 133

---

>RS4_THETN (Q8R7Y1) 30S ribosomal protein S4|
          Length = 206

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQ-----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 347
           +++ RY  + E Q     ++ + +  +T EN L    RRL  +V++ G A S   AR L+
Sbjct: 61  QKLKRYYGILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQLV 120

Query: 346 RQRHIRVGRQIVNVPSFMVR 287
              HI V  + V++PS++V+
Sbjct: 121 SHGHIEVNGKKVDIPSYLVK 140

---

>RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 401
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLRGKHGENFMILLEQRLDN 96

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_LISMF (Q71Z71) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 401
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_LISIN (Q92BB2) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -3

Query: 517 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 401
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 400 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_NITWN (Q3ST14) 30S ribosomal protein S4|
          Length = 205

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = -3

Query: 487 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHI 332
           YG ++E Q    YV A      + EN    L RRL T+V++A    +I  AR  I   H+
Sbjct: 62  YGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGHV 121

Query: 331 RVGRQIVNVPSFMVRV 284
           +V  + VN+PS+ ++V
Sbjct: 122 KVNGRRVNIPSYKLKV 137

---

>RS4_CORGL (Q8NSV4) 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTL 398
           + +LL L EK   R   G  + ++  RY   AE   +       T EN    L  RL  +
Sbjct: 44  SEYLLQLQEKQKARFIYGV-MEKQFRRY--YAEANRRA----GKTGENLVVLLESRLDNV 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           V++AG+A +   AR L+   H  V  + ++VPSF V
Sbjct: 97  VYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRV 132

---

>RS4_COREF (Q8FS34) 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTL 398
           + +LL L EK   R   G  + ++  RY   A  +         T EN    L  RL  +
Sbjct: 44  SEYLLQLQEKQKARFIYGV-MEKQFRRYYAEANRRP------GKTGENLVVMLESRLDNV 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           V++AG+A++   AR L+   H  V  + V+VPSF V
Sbjct: 97  VYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRV 132

---

>RS4_CORAM (Q3S664) 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTL 398
           + +LL L EK   +   G  L R+  RY + A  Q         T +N    L  RL  +
Sbjct: 44  SEYLLQLQEKQKAKYTYGV-LERQFRRYYVEANRQP------GKTGDNLVVLLETRLDNV 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           V++AG+A++   AR L+   H  V  +  NVPS+ V
Sbjct: 97  VYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYRV 132

---

>RS4_TROWT (Q83GC9) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = -3

Query: 502 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 344
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 343 QRHIRVGRQIVNVPSFMV 290
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RS4_TROW8 (Q83HV1) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = -3

Query: 502 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 344
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 343 QRHIRVGRQIVNVPSFMV 290
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4|
          Length = 197

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 82  LEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVDIPSY 123

---

>RS4_IDILO (Q5QXV7) 30S ribosomal protein S4|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = -3

Query: 436 TAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 281
           T EN L    +RL  +V++ G A +   AR L+  + + V  Q+VN+PSF VR E
Sbjct: 86  TGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKVRPE 140

---

>RS4_STAHJ (Q4L760) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   H+ V  + V++PS+ ++
Sbjct: 102 GLARTRRQARQLVGHGHVEVDGRRVDIPSYSLK 134

---

>RS4_STAES (Q8CS54) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = -3

Query: 502 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 386
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 287
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV+VPSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/94 (26%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           R  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  RKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ G+A +I  AR L+  RH+ V    V++PSF
Sbjct: 96  IFRLGLAPTIPGARQLVNHRHVLVNDCTVDIPSF 129

---

>RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G++ +I  AR L+  RHI V  QIV++PS+
Sbjct: 82  LEMRLDNIIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSY 123

---

>RS4_LACPL (Q88UX0) 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = -3

Query: 550 LDEKNPRRIFEGAALLRRMNRY---GLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGM 380
           L EK   R+  G    +  N +   G + EG+  +++++       L RRL  +V++ G+
Sbjct: 51  LREKQKLRMMYGLTERQFANLFIKAGKIREGKHGVNFMI------LLERRLDNMVYRLGL 104

Query: 379 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           A +   AR L+   HI V  + V++PS+ V V
Sbjct: 105 ATTRRQARQLVNHGHITVDGKRVDIPSYEVSV 136

---

>RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/94 (24%), Positives = 44/94 (46%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA +I  AR L+  +HI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHQHILINNNTVDIPSY 129

---

>RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 577 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 398
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +F+ GMA ++  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTVPGARQLVNHRHILVNDCIVDIPSY 129

---

>RS4_AQUAE (O66484) 30S ribosomal protein S4|
          Length = 211

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = -3

Query: 487 YGLLAEGQDKLDYVLALTAEN--------FLARRLQTLVFKAGMAKSIHHARVLIRQRHI 332
           YG L E Q K  + +A  ++         +L RRL  +V++ G A +   AR L+   H+
Sbjct: 66  YGGLREKQFKKYFDMASKSKENTGEMLLQYLERRLDNVVYRLGFASTRRQARQLVAHGHV 125

Query: 331 RVGRQIVNVPSFMV 290
            V  + VN+PS++V
Sbjct: 126 LVNGKKVNIPSYLV 139

---

>RR4_EQUSY (Q6H9K4) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV++PSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSF 131

---

>RR4_EQUPT (Q6H9K7) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV++PSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSF 131

---

>RR4_EQUPA (Q6H9K8) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV++PSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSF 131

---

>RR4_EQUFL (Q6H9L3) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV++PSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSF 131

---

>RR4_EQUAR (Q6H9L6) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV++PSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDIPSF 131

---

>RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4|
          Length = 205

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
 Frame = -3

Query: 499 RMNRYGLLAEGQDKLDYVLALTAEN---------------------FLARRLQTLVFKAG 383
           ++++YG+  + + KL Y   +T +                      +L  RL   VF+ G
Sbjct: 44  KLSQYGIRLQEKQKLKYNYGVTEKQLLLYIRKARTIKGSTGQMLLQYLEMRLDNTVFRLG 103

Query: 382 MAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
           +A +I  AR L+   HI V  +IV +PS+
Sbjct: 104 LAPTIAGARQLVNHGHIMVNNRIVTIPSY 132

---

>RS4_CORJK (Q4JTC1) 30S ribosomal protein S4|
          Length = 201

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTL 398
           + +LL L EK   +   G  L ++  RY   A  +         T +N    L  RL  +
Sbjct: 44  SEYLLQLQEKQKAKYTYGV-LEKQFRRYYAEANRRP------GKTGDNLVILLESRLDNV 96

Query: 397 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 290
           V++AG+A++   AR L+   H  V  + VNVPSF V
Sbjct: 97  VYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKV 132

---

>RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4|
          Length = 203

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 25/94 (26%), Positives = 50/94 (53%)
 Frame = -3

Query: 565 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 386
           RH+  ++E+  R +F  A+ ++         EG+  +++++       L +RL  +V++ 
Sbjct: 58  RHMYGMNERQFRTLFIKASKIK---------EGKHGVNFMV------LLEQRLDNVVYRL 102

Query: 385 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 284
           G+A +   AR L+   HI V  + V++PS+ V V
Sbjct: 103 GLATTRRQARQLVNHGHITVDGKRVDIPSYHVEV 136

---

>RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 27/91 (29%), Positives = 45/91 (49%)
 Frame = -3

Query: 568 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 389
           +++ + L+EK   R   G    R++ RY  +A    K       T    L  RL   +F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTE-RQLLRYIRIAR---KAKGSTGQTLLQLLEMRLDNTIFR 97

Query: 388 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 296
            GMA +I  AR L+   HI +  ++V++PS+
Sbjct: 98  LGMAATIRAARQLVNHGHIVLNERVVDIPSY 128

---

>RS4B_CLOAB (Q97J08) Putative 30S ribosomal protein S4 B|
          Length = 192

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -3

Query: 421 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 275
           L RRL  LV++ G   ++  AR ++   HI V  Q V++PS+ V +  E
Sbjct: 81  LERRLDNLVYRLGFGSTLREARQMVSHGHILVNGQKVDIPSYKVNIGDE 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,068,909
Number of Sequences: 219361
Number of extensions: 1367623
Number of successful extensions: 3847
Number of sequences better than 10.0: 386
Number of HSP's better than 10.0 without gapping: 3752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3843
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---