ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8k07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
2dbj|AK072896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
4dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
5dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
6gb|DQ284478.1| Solanum tuberosum clone 148F12 putative RNA proce... 74 5e-10
7ref|NM_116386.2| Arabidopsis thaliana unknown protein AT4G01560 ... 58 3e-05
8gb|AY050341.1| Arabidopsis thaliana AT4g01560/F11O4_6 mRNA, comp... 58 3e-05
9emb|BX826317.1|CNS0A4KT Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
10emb|BX826612.1|CNS0A40N Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
11gb|AY086463.1| Arabidopsis thaliana clone 25253 mRNA, complete s... 58 3e-05
12gb|BT020609.1| Arabidopsis thaliana At4g01560 gene, complete cds 58 3e-05
13gb|DQ017438.1| Drosophila melanogaster strain Oregon R CG10692 g... 48 0.027
14ref|NM_058131.3| Drosophila melanogaster CG6712-RA (CG6712), mRNA 48 0.027
15gb|AY051683.1| Drosophila melanogaster LD23405 full length cDNA 48 0.027
16gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, r... 48 0.027
17gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44... 48 0.027
18emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 46 0.11
19gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 46 0.11
20gb|AF361371.1|AF361371 Escherichia coli O104 antigen gene cluste... 42 1.7
21ref|NM_001002160.1| Danio rerio zgc:86604 (zgc:86604), mRNA 42 1.7
22gb|BC071307.1| Danio rerio zgc:86604, mRNA (cDNA clone MGC:86604... 42 1.7
23gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complet... 40 6.6
24gb|AC147033.2| Pan troglodytes BAC clone RP43-99I5 from 7, compl... 40 6.6
25gb|DQ017439.1| Drosophila melanogaster strain Russian 2b CG10692... 40 6.6
26emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch... 40 6.6
27emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on ch... 40 6.6
28gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell ... 40 6.6
29gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 40 6.6
30gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M... 40 6.6
31emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in ... 40 6.6
32gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 40 6.6 
>dbj|AK121945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G04, full
           insert sequence
          Length = 1301

 Score =  167 bits (84), Expect = 4e-38
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                       
Query: 359 aaagatgtacctgcgatgacggaagaatatatagtctcgctggttatggaaggtcacaac 418
           ||||||||||||| |||||||||| || |||||||||| ||| |||||||||||||||||
Sbjct: 920 aaagatgtacctgtgatgacggaaaaaaatatagtctctctgattatggaaggtcacaac 861

                                                                       
Query: 419 tcgtcggccncggaaatnngggtcttgagggaaaagagattgtatcatcctcccaacacg 478
           ||| || || |||||||  || ||||||||||||||||||||||||||||| ||||||||
Sbjct: 860 tcgccgaccacggaaattgggttcttgagggaaaagagattgtatcatccttccaacacg 801

                    
Query: 479 atgaccaag 487
           |||||||||
Sbjct: 800 atgaccaag 792



 Score =  129 bits (65), Expect = 9e-27
 Identities = 124/144 (86%)
 Strand = Plus / Minus

                                                                        
Query: 140  aaatcacaggaaaaaccttctcctgctcgtgtccaggtcaggcttgtgaacccactcgta 199
            |||| ||| |||||| ||||| ||||||||||||| ||| |||||||||||||| || ||
Sbjct: 1148 aaattacaagaaaaatcttcttctgctcgtgtccatgtccggcttgtgaacccattcata 1089

                                                                        
Query: 200  ctccccgcttttcgtgtcgaaggtcccgtgttgcaatgngagcagcttgagtgtgaagcg 259
            ||||||  |||| ||||| |||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 1088 ctccccattttttgtgtcaaaggtcccatgttgtaaggtgagcagcttgagggtgaagcg 1029

                                    
Query: 260  agggccgcattcctgaaggcgaca 283
            ||| || |||||||| ||||||||
Sbjct: 1028 aggaccacattcctggaggcgaca 1005
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>dbj|AK072896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C13, full
           insert sequence
          Length = 3286

 Score =  167 bits (84), Expect = 4e-38
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                       
Query: 359 aaagatgtacctgcgatgacggaagaatatatagtctcgctggttatggaaggtcacaac 418
           ||||||||||||| |||||||||| || |||||||||| ||| |||||||||||||||||
Sbjct: 907 aaagatgtacctgtgatgacggaaaaaaatatagtctctctgattatggaaggtcacaac 848

                                                                       
Query: 419 tcgtcggccncggaaatnngggtcttgagggaaaagagattgtatcatcctcccaacacg 478
           ||| || || |||||||  || ||||||||||||||||||||||||||||| ||||||||
Sbjct: 847 tcgccgaccacggaaattgggttcttgagggaaaagagattgtatcatccttccaacacg 788

                    
Query: 479 atgaccaag 487
           |||||||||
Sbjct: 787 atgaccaag 779



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                        
Query: 182  cttgtgaacccactcgtactccccgcttttcgtgtcgaaggtcccgtgttgcaatgngag 241
            |||||||||||| || ||||||||  |||| ||||| |||||||| ||||| || | |||
Sbjct: 1093 cttgtgaacccattcatactccccattttttgtgtcaaaggtcccatgttgtaaggtgag 1034

                                                                     
Query: 242  cagcttgagtgtgaagcgagggccgcattcctgaaggcgacagttcacttgcttctc 298
            ||||||||| ||||||||||| || |||||||| ||||||||  | |||||||||||
Sbjct: 1033 cagcttgagggtgaagcgaggaccacattcctggaggcgacaaattacttgcttctc 977
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 6e-25
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                           
Query: 367     acctgcgatgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggc 426
               ||||| |||||||||| || |||||||||| ||| |||||||||||||||||||| || |
Sbjct: 2003754 acctgtgatgacggaaaaaaatatagtctctctgattatggaaggtcacaactcgccgac 2003813

                                                          
Query: 427     cncggaaatnngggtcttgagggaaaagagattgtatcatcct 469
               | |||||||  || |||||||||||||||||||||||||||||
Sbjct: 2003814 cacggaaattgggttcttgagggaaaagagattgtatcatcct 2003856



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 182     cttgtgaacccactcgtactccccgcttttcgtgtcgaaggtcccgtgttgcaatgngag 241
               |||||||||||| || ||||||||  |||| ||||| |||||||| ||||| || | |||
Sbjct: 2002966 cttgtgaacccattcatactccccattttttgtgtcaaaggtcccatgttgtaaggtgag 2003025

                                               
Query: 242     cagcttgagtgtgaagcgagggccgcattcct 273
               ||||||||| ||||||||||| || |||||||
Sbjct: 2003026 cagcttgagggtgaagcgaggaccacattcct 2003057



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 140     aaatcacaggaaaaaccttctcctgctcgtgtccaggtcaggct 183
               |||| ||| |||||| ||||| ||||||||||||| ||| ||||
Sbjct: 2002829 aaattacaagaaaaatcttcttctgctcgtgtccatgtccggct 2002872
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548D03
          Length = 156709

 Score =  123 bits (62), Expect = 6e-25
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                          
Query: 367    acctgcgatgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggc 426
              ||||| |||||||||| || |||||||||| ||| |||||||||||||||||||| || |
Sbjct: 132534 acctgtgatgacggaaaaaaatatagtctctctgattatggaaggtcacaactcgccgac 132593

                                                         
Query: 427    cncggaaatnngggtcttgagggaaaagagattgtatcatcct 469
              | |||||||  || |||||||||||||||||||||||||||||
Sbjct: 132594 cacggaaattgggttcttgagggaaaagagattgtatcatcct 132636



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                          
Query: 182    cttgtgaacccactcgtactccccgcttttcgtgtcgaaggtcccgtgttgcaatgngag 241
              |||||||||||| || ||||||||  |||| ||||| |||||||| ||||| || | |||
Sbjct: 131746 cttgtgaacccattcatactccccattttttgtgtcaaaggtcccatgttgtaaggtgag 131805

                                              
Query: 242    cagcttgagtgtgaagcgagggccgcattcct 273
              ||||||||| ||||||||||| || |||||||
Sbjct: 131806 cagcttgagggtgaagcgaggaccacattcct 131837



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 140    aaatcacaggaaaaaccttctcctgctcgtgtccaggtcaggct 183
              |||| ||| |||||| ||||| ||||||||||||| ||| ||||
Sbjct: 131609 aaattacaagaaaaatcttcttctgctcgtgtccatgtccggct 131652
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score =  123 bits (62), Expect = 6e-25
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                         
Query: 367   acctgcgatgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggc 426
             ||||| |||||||||| || |||||||||| ||| |||||||||||||||||||| || |
Sbjct: 24616 acctgtgatgacggaaaaaaatatagtctctctgattatggaaggtcacaactcgccgac 24675

                                                        
Query: 427   cncggaaatnngggtcttgagggaaaagagattgtatcatcct 469
             | |||||||  || |||||||||||||||||||||||||||||
Sbjct: 24676 cacggaaattgggttcttgagggaaaagagattgtatcatcct 24718



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                         
Query: 182   cttgtgaacccactcgtactccccgcttttcgtgtcgaaggtcccgtgttgcaatgngag 241
             |||||||||||| || ||||||||  |||| ||||| |||||||| ||||| || | |||
Sbjct: 23828 cttgtgaacccattcatactccccattttttgtgtcaaaggtcccatgttgtaaggtgag 23887

                                             
Query: 242   cagcttgagtgtgaagcgagggccgcattcct 273
             ||||||||| ||||||||||| || |||||||
Sbjct: 23888 cagcttgagggtgaagcgaggaccacattcct 23919



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 140   aaatcacaggaaaaaccttctcctgctcgtgtccaggtcaggct 183
             |||| ||| |||||| ||||| ||||||||||||| ||| ||||
Sbjct: 23691 aaattacaagaaaaatcttcttctgctcgtgtccatgtccggct 23734
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>gb|DQ284478.1| Solanum tuberosum clone 148F12 putative RNA processing factor
           1-like mRNA, complete cds
          Length = 1277

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                       
Query: 396 cgctggttatggaaggtcacaactcgtcggccncggaaatnngggtcttgagggaaaaga 455
           |||||||| ||||||||||||||||| || || || || |  || ||||| |||||||| 
Sbjct: 838 cgctggttgtggaaggtcacaactcgacgtccacgaaattcgggatcttgtgggaaaagt 779

                                     
Query: 456 gattgtatcatcctcccaacacgatg 481
           || ||||||||||||||||| |||||
Sbjct: 778 gactgtatcatcctcccaactcgatg 753
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>ref|NM_116386.2| Arabidopsis thaliana unknown protein AT4G01560 mRNA, complete cds
          Length = 1309

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 153  aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
            ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 1087 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 1047
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>gb|AY050341.1| Arabidopsis thaliana AT4g01560/F11O4_6 mRNA, complete cds
          Length = 1282

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 153  aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
            ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 1066 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 1026
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>emb|BX826317.1|CNS0A4KT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB15ZC01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 436

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 153 aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
           ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 290 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 250
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>emb|BX826612.1|CNS0A40N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB47ZF05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1224

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 153  aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
            ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 1066 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 1026
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>gb|AY086463.1| Arabidopsis thaliana clone 25253 mRNA, complete sequence
          Length = 1227

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 153  aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
            ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 1087 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 1047
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>gb|BT020609.1| Arabidopsis thaliana At4g01560 gene, complete cds
          Length = 1032

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 153  aaccttctcctgctcgtgtccaggtcaggcttgtgaaccca 193
            ||||||||||||||||||||||  |||||||| ||||||||
Sbjct: 1022 aaccttctcctgctcgtgtccatttcaggcttatgaaccca 982
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>gb|DQ017438.1| Drosophila melanogaster strain Oregon R CG10692 gene, promoter
           region and partial cds
          Length = 1642

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 375 tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
           |||||||||||||| || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 349 tgacggaagaatatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 407
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>ref|NM_058131.3| Drosophila melanogaster CG6712-RA (CG6712), mRNA
          Length = 1342

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 375  tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
            |||||||||||||| || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 1094 tgacggaagaatatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 1036
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>gb|AY051683.1| Drosophila melanogaster LD23405 full length cDNA
          Length = 1314

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 375  tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
            |||||||||||||| || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 1054 tgacggaagaatatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 996
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>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone
             BACR02B06, complete sequence
          Length = 174314

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 375   tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
             |||||||||||||| || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 86319 tgacggaagaatatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 86377
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>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the
            complete sequence
          Length = 308012

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 375  tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
            |||||||||||||| || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 5795 tgacggaagaatatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 5853
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 153   aaccttctcctgctcgtgtccaggtcaggct 183
             ||||||||||||||||||||||  |||||||
Sbjct: 99841 aaccttctcctgctcgtgtccatttcaggct 99871
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>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4
          Length = 72872

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 153  aaccttctcctgctcgtgtccaggtcaggct 183
            ||||||||||||||||||||||  |||||||
Sbjct: 3736 aaccttctcctgctcgtgtccatttcaggct 3706
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>gb|AF361371.1|AF361371 Escherichia coli O104 antigen gene cluster, complete sequence
          Length = 12105

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 443  ttgagggaaaagagattgtat 463
            |||||||||||||||||||||
Sbjct: 2132 ttgagggaaaagagattgtat 2152
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>ref|NM_001002160.1| Danio rerio zgc:86604 (zgc:86604), mRNA
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  gcttgtgaacccactcgtactcccc 205
            ||||||||||||||||||| |||||
Sbjct: 1080 gcttgtgaacccactcgtattcccc 1056
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>gb|BC071307.1| Danio rerio zgc:86604, mRNA (cDNA clone MGC:86604 IMAGE:6892081),
            complete cds
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  gcttgtgaacccactcgtactcccc 205
            ||||||||||||||||||| |||||
Sbjct: 1080 gcttgtgaacccactcgtattcccc 1056
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>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence
          Length = 56858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 37/43 (86%)
 Strand = Plus / Minus

                                                      
Query: 391 agtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
           |||| |||||||| ||||||||||| ||||| || || |||||
Sbjct: 95  agtcgcgctggttgtggaaggtcaccactcgccgcccgcggaa 53
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>gb|AC147033.2| Pan troglodytes BAC clone RP43-99I5 from 7, complete sequence
          Length = 188305

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    cttttttcgtgtgtgtgggt 126
              ||||||||||||||||||||
Sbjct: 119305 cttttttcgtgtgtgtgggt 119324
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>gb|DQ017439.1| Drosophila melanogaster strain Russian 2b CG10692 gene, promoter
           region and partial cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 49/59 (83%)
 Strand = Plus / Plus

                                                                      
Query: 375 tgacggaagaatatatagtctcgctggttatggaaggtcacaactcgtcggccncggaa 433
           ||||||||||| || || |||||||| || ||||| |||||  |||| ||||| |||||
Sbjct: 349 tgacggaagaagatgtaatctcgctgattgtggaacgtcaccgctcggcggccgcggaa 407
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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
             sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   ttacttttttcgtgtgtgtg 123
             ||||||||||||||||||||
Sbjct: 70074 ttacttttttcgtgtgtgtg 70055
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>emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on chromosome 13 Contains the
              3' end of a novel gene, the gene for paraspeckle protein 1
              (PSP1) (FLJ10955), two novel genes, a  sialyltransferase 7D
              (SIAT7D) pseudogene, the 3' end of a variant of the ZNF237
              gene for zinc finger protein 237 and two CpG islands,
              complete sequence
          Length = 169303

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    tacttttttcgtgtgtgtgggtaa 128
              ||||||||| ||||||||||||||
Sbjct: 133646 tactttttttgtgtgtgtgggtaa 133623
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>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160440

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ttttcgtgtgtgtgggtaaa 129
             ||||||||||||||||||||
Sbjct: 94949 ttttcgtgtgtgtgggtaaa 94968
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>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ttttcgtgtgtgtgggtaaa 129
             ||||||||||||||||||||
Sbjct: 30143 ttttcgtgtgtgtgggtaaa 30162
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>gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M13, complete sequence
          Length = 186927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   cttttttcgtgtgtgtgggt 126
             ||||||||||||||||||||
Sbjct: 24961 cttttttcgtgtgtgtgggt 24980
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>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11,
            complete sequence
          Length = 202364

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 182  cttgtgaacccactcgtactcccc 205
            |||||||||||||||||| |||||
Sbjct: 2145 cttgtgaacccactcgtattcccc 2168
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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ttttcgtgtgtgtgggtaaa 129
              ||||||||||||||||||||
Sbjct: 112070 ttttcgtgtgtgtgggtaaa 112089


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,295,839
Number of Sequences: 3902068
Number of extensions: 3295839
Number of successful extensions: 52542
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52451
Number of HSP's gapped (non-prelim): 91
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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