>gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, complete sequence
          Length = 109659

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 47    gcacataaattaacagcataatt 69
             |||||||||||||||||||||||
Sbjct: 44064 gcacataaattaacagcataatt 44042

>gb|AC116685.9| Mus musculus chromosome 1, clone RP23-304F24, complete sequence
          Length = 173726

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 10    aaaagtttgatgttcaatttcacat 34
             |||||||||||||||||||| ||||
Sbjct: 85774 aaaagtttgatgttcaatttaacat 85750

>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence
          Length = 218917

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aaaagtttgatgttcaattt 29
             ||||||||||||||||||||
Sbjct: 64223 aaaagtttgatgttcaattt 64204

>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence
          Length = 203655

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaaagtttgatgttcaattt 29
             ||||||||||||||||||||
Sbjct: 49277 aaaagtttgatgttcaattt 49296

>gb|AC112968.11| Mus musculus chromosome 1, clone RP24-273P12, complete sequence
          Length = 181519

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   aaaagtttgatgttcaattt 29
            ||||||||||||||||||||
Sbjct: 9210 aaaagtttgatgttcaattt 9229

>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence
          Length = 233783

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaaagtttgatgttcaattt 29
              ||||||||||||||||||||
Sbjct: 202065 aaaagtttgatgttcaattt 202084

>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence
          Length = 234795

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aaaagtttgatgttcaattt 29
             ||||||||||||||||||||
Sbjct: 72165 aaaagtttgatgttcaattt 72146

>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence
          Length = 152406

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    aaaagtttgatgttcaatttcaca 33
             |||||||||||| |||||||||||
Sbjct: 71213 aaaagtttgatgctcaatttcaca 71236

>gb|AC157362.7| Mus musculus chromosome 1, clone RP23-382H8, complete sequence
          Length = 212565

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaaagtttgatgttcaattt 29
             ||||||||||||||||||||
Sbjct: 67149 aaaagtttgatgttcaattt 67168

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 11       aaagtttgatgttcaatttcacat 34
                |||||||| |||||||||||||||
Sbjct: 12274589 aaagtttggtgttcaatttcacat 12274566

>gb|AC080018.14|AC080018 Mus musculus 3 BAC RP23-200E11 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 209643

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaaagtttgatgttcaattt 29
             ||||||||||||||||||||
Sbjct: 88250 aaaagtttgatgttcaattt 88269

>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0592B08
          Length = 131096

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     aaagtttgatgttcaatttcacat 34
              |||||||| |||||||||||||||
Sbjct: 111611 aaagtttggtgttcaatttcacat 111588

>emb|AL772358.6| Mouse DNA sequence from clone RP23-397K2 on chromosome 4, complete
              sequence
          Length = 173518

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     cacataaattaacagcataa 67
              ||||||||||||||||||||
Sbjct: 103989 cacataaattaacagcataa 104008

>emb|AL731679.9| Mouse DNA sequence from clone RP23-33J13 on chromosome X, complete
              sequence
          Length = 228007

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaaagtttgatgttcaattt 29
              ||||||||||||||||||||
Sbjct: 217744 aaaagtttgatgttcaattt 217763

>emb|AL606832.4| Mouse DNA sequence from clone RP23-346G22 on chromosome 3, complete
              sequence
          Length = 157428

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     aaaagtttgatgttcaattt 29
              ||||||||||||||||||||
Sbjct: 106647 aaaagtttgatgttcaattt 106628

>gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome 3, complete sequence
          Length = 211791

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 53     aaattaacagcataattca 71
              |||||||||||||||||||
Sbjct: 113312 aaattaacagcataattca 113294

>gb|AC008309.8| Drosophila melanogaster clone BACR06L13, complete sequence
          Length = 163325

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     ggcacataaattaacagca 64
              |||||||||||||||||||
Sbjct: 159757 ggcacataaattaacagca 159775

>ref|XM_760443.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0009) partial mRNA
          Length = 1497

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 13  agtttgatgttcaatttca 31
           |||||||||||||||||||
Sbjct: 186 agtttgatgttcaatttca 168

>emb|AL049611.24|HSJ180E22 Human DNA sequence from clone RP1-180E22 on chromosome 6p11.2-12.3
             Contains the 3' part of the gene for a novel protein with
             possible Calmodulin like calcium-binding domains, the gene
             for a TRAM-like protein (KIAA0057),  part of a novel gene
             and a CpG island, complete sequence
          Length = 109813

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 58    aacagcataattcagatctagca 80
             ||||||||||||||||| |||||
Sbjct: 36350 aacagcataattcagatatagca 36372

>gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, complete sequence
          Length = 163577

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 53     aaattaacagcataattcagatc 75
              ||||||||| |||||||||||||
Sbjct: 154980 aaattaacaacataattcagatc 154958

>gb|AC025069.9| Homo sapiens chromosome 11, clone RP11-132I17, complete sequence
          Length = 159986

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     ttcaatttcacatcaccat 40
              |||||||||||||||||||
Sbjct: 102940 ttcaatttcacatcaccat 102958

>gb|AC021824.7| Homo sapiens chromosome 11, clone RP11-220C23, complete sequence
          Length = 160869

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    ttcaatttcacatcaccat 40
             |||||||||||||||||||
Sbjct: 54062 ttcaatttcacatcaccat 54080

>gb|AC091113.7| Homo sapiens chromosome 17, clone RP11-410N7, complete sequence
          Length = 129396

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 53    aaattaacagcataattcagatc 75
             ||||||||| |||||||||||||
Sbjct: 27538 aaattaacaacataattcagatc 27516

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 50      cataaattaacagcataattcag 72
               ||||||||||||||| |||||||
Sbjct: 4851327 cataaattaacagcaaaattcag 4851349

>gb|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, region 93D-93D, BAC clone
             BACR34E13, complete sequence
          Length = 167475

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ggcacataaattaacagca 64
             |||||||||||||||||||
Sbjct: 65071 ggcacataaattaacagca 65089

>gb|AC096556.1| Homo sapiens BAC clone RP11-102G8 from 2, complete sequence
          Length = 83374

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    aaattaacagcataattca 71
             |||||||||||||||||||
Sbjct: 54094 aaattaacagcataattca 54112

>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 50    cataaattaacagcataattcag 72
             ||||||||||||||| |||||||
Sbjct: 10581 cataaattaacagcaaaattcag 10603

>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 50    cataaattaacagcataattcag 72
             ||||||||||||||| |||||||
Sbjct: 56121 cataaattaacagcaaaattcag 56143

>gb|AE003734.3| Drosophila melanogaster chromosome 3R, section 72 of 118 of the complete
              sequence
          Length = 250533

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     ggcacataaattaacagca 64
              |||||||||||||||||||
Sbjct: 200216 ggcacataaattaacagca 200234

>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete
             sequence
          Length = 216706

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    acataaattaacagcataattca 71
             |||||||||||| ||||||||||
Sbjct: 94317 acataaattaactgcataattca 94339

>emb|AL590996.12| Mouse DNA sequence from clone RP23-328K2 on chromosome 11, complete
             sequence
          Length = 139242

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aattaacagcataattcag 72
             |||||||||||||||||||
Sbjct: 84180 aattaacagcataattcag 84162


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 799,510
Number of Sequences: 3902068
Number of extensions: 799510
Number of successful extensions: 55345
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55261
Number of HSP's gapped (non-prelim): 84
length of query: 98
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 77
effective length of database: 17,151,101,840
effective search space: 1320634841680
effective search space used: 1320634841680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)