| Clone Name | rbags8m20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 422 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 363 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 362 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 303 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 302 tgggagggcttggtgttcatccgcttgcggagga 269
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 426 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 367 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 366 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 307 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 306 tgggagggcttggtgttcatccgcttgcggagga 273
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Plus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 524340 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 524399 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 524400 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 524459 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 524460 tgggagggcttggtgttcatccgcttgcggagga 524493
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Plus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 126504 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 126563 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 126564 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 126623 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 126624 tgggagggcttggtgttcatccgcttgcggagga 126657
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 422 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 363 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 362 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 303 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 302 tgggagggcttggtgttcatccgcttgcggagga 269
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 426 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 367 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 366 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 307 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 306 tgggagggcttggtgttcatccgcttgcggagga 273
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 149 bits (75), Expect = 3e-33 Identities = 134/154 (87%) Strand = Plus / Plus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||| ||||| ||||| || ||||||| || |||||||||||||| |||||||| || Sbjct: 78252 acgccgtcgaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtggggg 78311 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 78312 atcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggcca 78371 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 78372 tgggagggcttggtgttcatccgcttgcggagga 78405
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 141 bits (71), Expect = 7e-31 Identities = 133/154 (86%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||||||| ||||||| |||||||||||||| |||||||| | | ||||||||||| Sbjct: 356 acgccctcgtacgccttgagcctggcgagcgcggcctcgcccctcgcggtcttgtgcgga 297 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||| ||||| | ||||||||||| || || | |||||||||||||||||||| ||| Sbjct: 296 atcataccgcggatggtgcgccagaggatcttggccggggcgcggaagtggatggggccg 237 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||||||||||||||| Sbjct: 236 tgggagggcttggtgttcatccgcttgcggagga 203
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 117 bits (59), Expect = 1e-23 Identities = 130/154 (84%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||||||| ||||||||||||| || ||||| ||||| || | ||||||||||| Sbjct: 411 acgccctcgtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcggg 352 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| ||||||||||||| || || | ||||| ||||||||||||||| || Sbjct: 351 atcatgccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggcca 292 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||| ||||||||||| Sbjct: 291 tgggagggcttggtgttcatcctcttgcggagga 258
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 117 bits (59), Expect = 1e-23 Identities = 94/106 (88%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 ||||||||||| ||||| ||||| | ||||||||| | || || | ||||||||||||| Sbjct: 349 gtcttgtgcggaatcatcccgcggatggtgcgccacaggatcttggcgggggcgcggaag 290 Query: 109 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggagga 154 |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 289 tggatgggcccgtgggacggcttggtgttcatccgcttgcggagga 244
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 117 bits (59), Expect = 1e-23 Identities = 130/154 (84%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||||||| ||||||||||||| || ||||| ||||| || | ||||||||||| Sbjct: 421 acgccctcgtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcggg 362 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| ||||||||||||| || || | ||||| ||||||||||||||| || Sbjct: 361 atcatgccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggcca 302 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||| ||||||||||| Sbjct: 301 tgggagggcttggtgttcatcctcttgcggagga 268
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 117 bits (59), Expect = 1e-23 Identities = 130/154 (84%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcggn 60 ||||||||| ||||||||||||| || ||||| ||||| || | ||||||||||| Sbjct: 421 acgccctcgtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcggg 362 Query: 61 atcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccg 120 ||||||||||| ||||||||||||| || || | ||||| ||||||||||||||| || Sbjct: 361 atcatgccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggcca 302 Query: 121 tgcgacggcttggtgttcatccgcttgcggagga 154 || || |||||||||||||||| ||||||||||| Sbjct: 301 tgggagggcttggtgttcatcctcttgcggagga 268
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 109 bits (55), Expect = 2e-21 Identities = 93/106 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 ||||||||||| ||||| ||||| | ||||||||| | || || | |||||||||||| Sbjct: 837 gtcttgtgcggaatcatcccgcggatggtgcgccacaggatcttggccggggcgcggaag 778 Query: 109 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggagga 154 |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 777 tggatggggccgtgggacggcttggtgttcatccgcttgcggagga 732
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 97.6 bits (49), Expect = 9e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 ||||||||||| ||||| ||||| | ||||||||| | || || || |||||||||||| Sbjct: 338 gtcttgtgcggaatcatcccgcggatggtgcgccacaggatcttggacggggcgcggaag 279 Query: 109 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggag 152 |||||||| || || || |||||||||||||||||||||||||| Sbjct: 278 tggatgggcccatgggatggcttggtgttcatccgcttgcggag 235
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 93.7 bits (47), Expect = 1e-16 Identities = 82/94 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 ||||||||||| ||||||||||| ||||||||||||| || || | ||||| ||||||| Sbjct: 212 gtcttgtgcgggatcatgccgcggacggtgcgccagaggatcttggcgggggagcggaag 153 Query: 109 tggatgggaccgtgcgacggcttggtgttcatcc 142 |||||||| || || || |||||||||||||||| Sbjct: 152 tggatggggccatgggagggcttggtgttcatcc 119
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30899750 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30899691 Query: 127 ggcttggtgttcatccgcttgcggagga 154 |||||||||||||||| ||||||||||| Sbjct: 30899690 ggcttggtgttcatcctcttgcggagga 30899663 Score = 63.9 bits (32), Expect = 1e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30886558 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30886617 Query: 127 ggcttggtgttcatcc 142 |||||||||||||||| Sbjct: 30886618 ggcttggtgttcatcc 30886633 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 30899914 acgccctcgtacgccttcagccttgccagcgccgcctc 30899877
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 43340 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 43399 Query: 127 ggcttggtgttcatccgcttgcggagga 154 |||||||||||||||| ||||||||||| Sbjct: 43400 ggcttggtgttcatcctcttgcggagga 43427 Score = 63.9 bits (32), Expect = 1e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 56532 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 56473 Query: 127 ggcttggtgttcatcc 142 |||||||||||||||| Sbjct: 56472 ggcttggtgttcatcc 56457 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 43176 acgccctcgtacgccttcagccttgccagcgccgcctc 43213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30990273 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30990214 Query: 127 ggcttggtgttcatccgcttgcggagga 154 |||||||||||||||| ||||||||||| Sbjct: 30990213 ggcttggtgttcatcctcttgcggagga 30990186 Score = 63.9 bits (32), Expect = 1e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30977081 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30977140 Query: 127 ggcttggtgttcatcc 142 |||||||||||||||| Sbjct: 30977141 ggcttggtgttcatcc 30977156 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 30990437 acgccctcgtacgccttcagccttgccagcgccgcctc 30990400
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Minus Query: 96 gggggcgcggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggagga 154 |||||| |||||||| ||||| ||||| ||||||||||||||||||| ||||||||||| Sbjct: 69122 gggggcacggaagtgaatggggccgtgagacggcttggtgttcatcctcttgcggagga 69064
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 69.9 bits (35), Expect = 2e-09 Identities = 88/106 (83%) Strand = Plus / Plus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 |||||||| || ||||| || || |||||||||||||| || || || || || ||||| Sbjct: 385 gtcttgtgtggtatcatacctcgaacggtgcgccagaagatcttagaaggagcacggaaa 444 Query: 109 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggagga 154 ||||||||||| || || ||||| |||||||||| ||| ||||||| Sbjct: 445 tggatgggaccatgagagggcttagtgttcatcctcttacggagga 490
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 63.9 bits (32), Expect = 1e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 67 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 126 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 54558 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 54499 Query: 127 ggcttggtgttcatcc 142 |||||||||||||||| Sbjct: 54498 ggcttggtgttcatcc 54483
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 58.0 bits (29), Expect = 8e-06 Identities = 53/61 (86%) Strand = Plus / Minus Query: 94 gagggggcgcggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggagg 153 ||||| |||||||| |||||||| ||||| || |||||||||||||| || ||||| ||| Sbjct: 224 gagggagcgcggaaatggatgggtccgtgagaaggcttggtgttcatgcgtttgcgaagg 165 Query: 154 a 154 | Sbjct: 164 a 164
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 65 ttggtgttcatccgcttgcggagga 41
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 782 ttggtgttcatccgcttgcggagga 758
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 341 ttggtgttcatccgcttgcggagga 317
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 115 ttggtgttcatccgcttgcggagga 91
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggagga 193
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 222 ttggtgttcatccgcttgcggagga 198
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 221 ttggtgttcatccgcttgcggagga 197
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 194 ttggtgttcatccgcttgcggagga 170
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggagga 192
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggagga 192
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 204 ttggtgttcatccgcttgcggagga 180
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 199 ttggtgttcatccgcttgcggagga 175
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 30164 ttggtgttcatccgcttgcggagga 30188
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggagga 168
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 190 ttggtgttcatccgcttgcggagga 166
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 865 ttggtgttcatccgcttgcggagga 841
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 2070 ttggtgttcatccgcttgcggagga 2046
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 81061 ttggtgttcatccgcttgcggagga 81037
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 54568 ttggtgttcatccgcttgcggagga 54592
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 211 ttggtgttcatccgcttgcggagga 187
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggagga 168
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 94939 ttggtgttcatccgcttgcggagga 94915
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 668 ttggtgttcatccgcttgcggagga 644
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggagga 181
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggagga 181
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggagga 181
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 172 ttggtgttcatccgcttgcggagga 148
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 702 ttggtgttcatccgcttgcggagga 678
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 180 ttggtgttcatccgcttgcggagga 156
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 77685 ttggtgttcatccgcttgcggagga 77661
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggagga 158
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggagga 1130
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1079 ttggtgttcatccgcttgcggagga 1055
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggagga 1130
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggagga 1130
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggagga 1129
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1078 ttggtgttcatccgcttgcggagga 1054
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggagga 1129
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggagga 1129
>ref|XM_945323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649250), mRNA Length = 655 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggagga 191
>ref|XM_941634.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649250), mRNA Length = 667 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggagga 191
>ref|XM_945318.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649250), mRNA Length = 575 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 210 ttggtgttcatccgcttgcggagga 186
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 218 ttggtgttcatccgcttgcggagga 194
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 137 ttggtgttcatccgcttgcggagga 113
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 110 ttggtgttcatccgcttgcggagga 86
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 212 ttggtgttcatccgcttgcggagga 188
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 226 ttggtgttcatccgcttgcggagga 202
>ref|XM_930133.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC644511), mRNA Length = 660 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggagga 191
>ref|XM_934381.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC644511), mRNA Length = 575 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 210 ttggtgttcatccgcttgcggagga 186
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 218 ttggtgttcatccgcttgcggagga 194
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 110 ttggtgttcatccgcttgcggagga 86
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 130 ttggtgttcatccgcttgcggagga 106
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 226 ttggtgttcatccgcttgcggagga 202
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 212 ttggtgttcatccgcttgcggagga 188
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggagga 192
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 196 ttggtgttcatccgcttgcggagga 172
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 94399 ttggtgttcatccgcttgcggagga 94423
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 10886 ttggtgttcatccgcttgcggagga 10862
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggagga 193
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 196 ttggtgttcatccgcttgcggagga 172
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 200 ttggtgttcatccgcttgcggagga 176
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 49 ttggtgttcatccgcttgcggagga 25
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggagga 181
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 197 ttggtgttcatccgcttgcggagga 173
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 197 ttggtgttcatccgcttgcggagga 173
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||||| Sbjct: 3694 ttggtgttcatccgcttgcggagga 3670
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 68776 tggtgttcatccgcttgcggagga 68753
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Plus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 13586 tggtgttcatccgcttgcggagga 13609
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 216 tggtgttcatccgcttgcggagga 193
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 129 tggtgttcatccgcttgcggagga 106
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 218 tggtgttcatccgcttgcggagga 195
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 210 tggtgttcatccgcttgcggagga 187
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 129 tggtgttcatccgcttgcggagga 106
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 218 tggtgttcatccgcttgcggagga 195
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 48.1 bits (24), Expect = 0.008 Identities = 24/24 (100%) Strand = Plus / Minus Query: 131 tggtgttcatccgcttgcggagga 154 |||||||||||||||||||||||| Sbjct: 210 tggtgttcatccgcttgcggagga 187
>ref|XR_002869.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) (LOC547166), mRNA Length = 631 Score = 46.1 bits (23), Expect = 0.030 Identities = 37/42 (88%) Strand = Plus / Minus Query: 48 cgtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||| || | |||||| ||||| |||||||||||||| Sbjct: 276 cgtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 235
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggag 152 ||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggag 195
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 193 ggtgttcatccgcttgcggagga 171
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 133 ggtgttcatccgcttgcggagga 111
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggagga 192
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggagga 192
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggagga 193
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 133 ggtgttcatccgcttgcggagga 111
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggagga 192
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggagga 192
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggag 152 ||||||||||||||||||||||| Sbjct: 1002 ttggtgttcatccgcttgcggag 980
>emb|AL512597.11| Mouse DNA sequence from clone RP23-132G2 on chromosome X, complete sequence Length = 174367 Score = 46.1 bits (23), Expect = 0.030 Identities = 37/42 (88%) Strand = Plus / Plus Query: 48 cgtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||| || | |||||| ||||| |||||||||||||| Sbjct: 79288 cgtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 79329
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 108060 ggtgttcatccgcttgcggagga 108038
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggag 152 ||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggag 170
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 46.1 bits (23), Expect = 0.030 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggagga 154 ||||||||||||||||||||||| Sbjct: 44869 ggtgttcatccgcttgcggagga 44847
>gb|BC086382.1| Rattus norvegicus ribosomal protein L13A, mRNA (cDNA clone MGC:105295 IMAGE:7301486), complete cds Length = 690 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||||| | |||||| ||||| |||||||| ||||| Sbjct: 289 gtcttgtgcggcagcatgcctcgcacagtgcgccaaaaaat 249 Score = 42.1 bits (21), Expect = 0.47 Identities = 27/29 (93%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgcttgcggag 152 ||||| ||||||||||||||||| ||||| Sbjct: 214 gacgggttggtgttcatccgctttcggag 186
>ref|NM_173340.2| Rattus norvegicus ribosomal protein L13A (Rpl13a), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||||| | |||||| ||||| |||||||| ||||| Sbjct: 289 gtcttgtgcggcagcatgcctcgcacagtgcgccaaaaaat 249 Score = 42.1 bits (21), Expect = 0.47 Identities = 27/29 (93%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgcttgcggag 152 ||||| ||||||||||||||||| ||||| Sbjct: 214 gacgggttggtgttcatccgctttcggag 186
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 110205 acgccctcgtacgccttcagccttgccagcgccgcctc 110168
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 14794 acgccctcgtacgccttcagccttgccagcgccgcctc 14757
>gb|BC082289.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone MGC:102485 IMAGE:6486177), complete cds Length = 658 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 282 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 242
>ref|XM_866179.1| PREDICTED: Bos taurus similar to ribosomal protein L13a (LOC614617), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcgga 151 |||||||||||||||||||||| Sbjct: 329 ttggtgttcatccgcttgcgga 308
>ref|NM_009438.3| Mus musculus ribosomal protein L13a (Rpl13a), mRNA Length = 803 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 296 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 256
>emb|CT010169.1| Mus musculus full open reading frame cDNA clone RZPDo836A1250D for gene Rpl13a, Ribosomal protein L13a; complete cds, incl. stopcodon Length = 612 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 275 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 235
>gb|BC093376.1| Rattus norvegicus cDNA clone IMAGE:7387955, **** WARNING: chimeric clone **** Length = 1502 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||||| | |||||| ||||| |||||||| ||||| Sbjct: 1110 gtcttgtgcggcagcatgcctcgcacagtgcgccaaaaaat 1070 Score = 42.1 bits (21), Expect = 0.47 Identities = 27/29 (93%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgcttgcggag 152 ||||| ||||||||||||||||| ||||| Sbjct: 1035 gacgggttggtgttcatccgctttcggag 1007
>emb|X68282.1|RNRPL13A R.norvegicus mRNA for ribosomal protein L13a Length = 653 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||||| | |||||| ||||| |||||||| ||||| Sbjct: 290 gtcttgtgcggcagcatgcctcgcacagtgcgccaaaaaat 250 Score = 42.1 bits (21), Expect = 0.47 Identities = 27/29 (93%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgcttgcggag 152 ||||| ||||||||||||||||| ||||| Sbjct: 215 gacgggttggtgttcatccgctttcggag 187
>gb|BC086896.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone MGC:107571 IMAGE:6776320), complete cds Length = 676 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>emb|AL592222.11| Mouse DNA sequence from clone RP23-366M19 on chromosome 11 Contains a ribosomal protein L13a (Rpl13a) pseudogene, the 5' end of a novel gene, the gene for peptidyl-tRNA hydrolase 2, mitochondrial precursor (PTH2), the Cltc gene for clathrin heavy polypeptide (Hc) and the 3' end of the Dhx40 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 40, complete sequence Length = 160796 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Plus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 5566 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 5606
>dbj|AK146318.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730051F21 product:ribosomal protein L13a, full insert sequence Length = 1016 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>gb|U73859.1|RNU73859 Rattus norvegicus hexokinase type III mRNA, complete cds Length = 3692 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 ||||||||||| | |||||| ||||| |||||||| ||||| Sbjct: 3313 gtcttgtgcggcagcatgcctcgcacagtgcgccaaaaaat 3273 Score = 42.1 bits (21), Expect = 0.47 Identities = 27/29 (93%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgcttgcggag 152 ||||| ||||||||||||||||| ||||| Sbjct: 3238 gacgggttggtgttcatccgctttcggag 3210
>dbj|AK156035.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830005C02 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>dbj|AK168903.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920063P05 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>dbj|AK159882.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420036H07 product:ribosomal protein L13a, full insert sequence Length = 656 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 296 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 256
>dbj|AK168784.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920055C13 product:ribosomal protein L13a, full insert sequence Length = 658 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>dbj|AK170030.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630010M18 product:ribosomal protein L13a, full insert sequence Length = 934 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 299 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 259
>dbj|AK077512.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730433A16 product:ribosomal protein L13a, full insert sequence Length = 1016 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 298 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 258
>dbj|AK007609.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810026N22 product:ribosomal protein L13a, full insert sequence Length = 803 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 296 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 256
>gb|BC065799.1| Mus musculus ribosomal protein L13a, mRNA (cDNA clone IMAGE:574251) Length = 1267 Score = 44.1 bits (22), Expect = 0.12 Identities = 36/41 (87%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaat 89 |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 698 gtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 658
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 12942869 acgccctcgtacgccttcagccttgccagcgccgcctc 12942832
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 452 acgccctcgtacgccttcagccttgccagcgccgcctc 415
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 acgccctcgaacgccttcagcctggcgagcgcagcctc 38 ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 13023076 acgccctcgtacgccttcagccttgccagcgccgcctc 13023039
>ref|NM_117386.3| Arabidopsis thaliana structural constituent of ribosome AT4G13170 mRNA, complete cds Length = 833 Score = 42.1 bits (21), Expect = 0.47 Identities = 74/92 (80%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 |||||||| || ||||| ||||| || ||||||||||| || || || || || || ||| Sbjct: 313 gtcttgtgtggaatcatcccgcgaacagtgcgccagaagatcttggaaggagcacgaaag 254 Query: 109 tggatgggaccgtgcgacggcttggtgttcat 140 || || ||||| || || ||||| |||||||| Sbjct: 253 tgaataggaccatgagaaggcttagtgttcat 222
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 212 tgttcatccgcttgcggagga 192
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||| ||||| Sbjct: 194 ttggtgttcatccgcttgcagagga 170
>gb|DQ084040.1| Oxyuranus scutellatus 60S ribosomal protein L13a mRNA, partial cds Length = 664 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||| ||||||||||||| Sbjct: 143 ttggtgttcatacgcttgcggagga 119
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 |||||||||||| |||||||||||| Sbjct: 58426 ttggtgttcatctgcttgcggagga 58402
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 50308 ggtgttcatccgcttgcggag 50288
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 56729 ggtgttcatccgcttgcggag 56709
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 33601 ggtgttcatccgcttgcggag 33581
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 28627 ggtgttcatccgcttgcggag 28607
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 131706 tgttcatccgcttgcggagga 131726
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||| ||||| Sbjct: 126 ttggtgttcatccgcttgccgagga 102
>gb|AC093286.3| Homo sapiens chromosome 5 clone RP11-456A14, complete sequence Length = 145047 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 |||||||||||||||||| |||||| Sbjct: 9181 ttggtgttcatccgcttgtggagga 9205
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 5453 ggtgttcatccgcttgcggag 5433
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 54012 ggtgttcatccgcttgcggag 53992
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcgg 150 ||||||||||||||||||||| Sbjct: 59841 ttggtgttcatccgcttgcgg 59821
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||| ||||| Sbjct: 125 ttggtgttcatccgcttgccgagga 101
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||| ||||| Sbjct: 125 ttggtgttcatccgcttgccgagga 101
>ref|XM_945137.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 14 (LOC387841), mRNA Length = 1047 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 206 tgttcatccgcttgcggagga 186
>ref|XM_945135.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 13 (LOC387841), mRNA Length = 1053 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 212 tgttcatccgcttgcggagga 192
>ref|XM_945132.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 12 (LOC387841), mRNA Length = 1054 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 213 tgttcatccgcttgcggagga 193
>ref|XM_945129.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 11 (LOC387841), mRNA Length = 1831 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 990 tgttcatccgcttgcggagga 970
>ref|XM_941323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC387841), mRNA Length = 1899 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 1058 tgttcatccgcttgcggagga 1038
>ref|XM_945122.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 10 (LOC387841), mRNA Length = 1833 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 1058 tgttcatccgcttgcggagga 1038
>ref|XM_932701.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC387841), mRNA Length = 1047 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 206 tgttcatccgcttgcggagga 186
>ref|XM_932698.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC387841), mRNA Length = 1053 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 212 tgttcatccgcttgcggagga 192
>ref|XM_932693.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC387841), mRNA Length = 1054 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 213 tgttcatccgcttgcggagga 193
>ref|XM_932689.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC387841), mRNA Length = 1831 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 990 tgttcatccgcttgcggagga 970
>ref|XM_370681.3| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC387841), mRNA Length = 1899 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 1058 tgttcatccgcttgcggagga 1038
>ref|XM_932682.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC387841), mRNA Length = 1833 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tgttcatccgcttgcggagga 154 ||||||||||||||||||||| Sbjct: 1058 tgttcatccgcttgcggagga 1038
>gb|AY060518.1| Arabidopsis thaliana AT4g13170/F17N18_60 mRNA, complete cds Length = 621 Score = 42.1 bits (21), Expect = 0.47 Identities = 74/92 (80%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 |||||||| || ||||| ||||| || ||||||||||| || || || || || || ||| Sbjct: 290 gtcttgtgtggaatcatcccgcgaacagtgcgccagaagatcttggaaggagcacgaaag 231 Query: 109 tggatgggaccgtgcgacggcttggtgttcat 140 || || ||||| || || ||||| |||||||| Sbjct: 230 tgaataggaccatgagaaggcttagtgttcat 199
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 74595 ggtgttcatccgcttgcggag 74615
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 76629 ggtgttcatccgcttgcggag 76609
>gb|AY052263.1| Arabidopsis thaliana AT4g13170/F17N18_60 mRNA, complete cds Length = 828 Score = 42.1 bits (21), Expect = 0.47 Identities = 74/92 (80%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 |||||||| || ||||| ||||| || ||||||||||| || || || || || || ||| Sbjct: 311 gtcttgtgtggaatcatcccgcgaacagtgcgccagaagatcttggaaggagcacgaaag 252 Query: 109 tggatgggaccgtgcgacggcttggtgttcat 140 || || ||||| || || ||||| |||||||| Sbjct: 251 tgaataggaccatgagaaggcttagtgttcat 220
>gb|AC020899.6| Homo sapiens chromosome 5 clone CTC-484M2, complete sequence Length = 164286 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 |||||||||||||||||| |||||| Sbjct: 143458 ttggtgttcatccgcttgtggagga 143482
>emb|BX828350.1|CNS0A3Y6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 821 Score = 42.1 bits (21), Expect = 0.47 Identities = 74/92 (80%) Strand = Plus / Minus Query: 49 gtcttgtgcggnatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 108 |||||||| || ||||| ||||| || ||||||||||| || || || || || || ||| Sbjct: 305 gtcttgtgtggaatcatcccgcgaacagtgcgccagaagatcttggaaggagcacgaaag 246 Query: 109 tggatgggaccgtgcgacggcttggtgttcat 140 || || ||||| || || ||||| |||||||| Sbjct: 245 tgaataggaccatgagaaggcttagtgttcat 214
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ttggtgttcatccgcttgcggagga 154 ||||||||||||||||||| ||||| Sbjct: 125260 ttggtgttcatccgcttgccgagga 125284
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 42.1 bits (21), Expect = 0.47 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ttggtgttcatccgcttgcggagga 154 |||||||||||| |||||||||||| Sbjct: 90287 ttggtgttcatctgcttgcggagga 90263
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 42.1 bits (21), Expect = 0.47 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggtgttcatccgcttgcggag 152 ||||||||||||||||||||| Sbjct: 79009 ggtgttcatccgcttgcggag 78989
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 40.1 bits (20), Expect = 1.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 103 cggaagtggatgggaccgtgcgacggcttggtgttcatcc 142 |||||||||| |||||| |||| || ||||||||||||| Sbjct: 225 cggaagtggaagggaccccgcgaggggttggtgttcatcc 186
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cgccctcgaacgccttcagc 21 |||||||||||||||||||| Sbjct: 336817 cgccctcgaacgccttcagc 336798
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgcagcctcgccgcggggcg 49 |||||||||||||||||||| Sbjct: 17522625 cgcagcctcgccgcggggcg 17522606
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gaacgccttcagcctggcga 28 |||||||||||||||||||| Sbjct: 653443 gaacgccttcagcctggcga 653462
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgcagcctcgccgcggggcg 49 |||||||||||||||||||| Sbjct: 153666 cgcagcctcgccgcggggcg 153647
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075M17 Length = 91422 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgcagcctcgccgcggggcg 49 |||||||||||||||||||| Sbjct: 27071 cgcagcctcgccgcggggcg 27052
>ref|XM_509387.1| PREDICTED: Pan troglodytes similar to KIAA0614 protein (LOC452261), mRNA Length = 5376 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 1570 cagcctggccagcgcagcctcgc 1548
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 ggcgagcgcagcctcgccgcggg 46 ||||||||| ||||||||||||| Sbjct: 2156380 ggcgagcgccgcctcgccgcggg 2156402
>ref|XM_360074.1| Magnaporthe grisea 70-15 hypothetical protein (MG05449.4) partial mRNA Length = 609 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 97 ggggcgcggaagtggatgggacc 119 |||||||||||||||| |||||| Sbjct: 233 ggggcgcggaagtggaagggacc 211
>ref|XM_323028.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03727.1) partial mRNA Length = 3318 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 33 agcctcgccgcggggcgtcttgt 55 |||||||||||||| |||||||| Sbjct: 588 agcctcgccgcgggccgtcttgt 566
>ref|XM_956410.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03727.1) partial mRNA Length = 3318 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 33 agcctcgccgcggggcgtcttgt 55 |||||||||||||| |||||||| Sbjct: 588 agcctcgccgcgggccgtcttgt 566
>ref|XM_914190.2| PREDICTED: Mus musculus similar to 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) (LOC638236), mRNA Length = 689 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 63 catgccgcgcacggtgcgccagaaaat 89 |||||| ||||| |||||||||||||| Sbjct: 163 catgcctcgcacagtgcgccagaaaat 137
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 gccgcgcacggtgcgccag 84 ||||||||||||||||||| Sbjct: 1711272 gccgcgcacggtgcgccag 1711290
>gb|BC101400.1| Xenopus tropicalis cDNA clone IMAGE:6999526, partial cds Length = 3860 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 1437 ccttcagcctggcgagcgc 1455
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 atcatgccgcgcacggtgc 79 ||||||||||||||||||| Sbjct: 550487 atcatgccgcgcacggtgc 550505
>emb|AJ507736.1|MMU507736 Mus musculus mRNA for putative adapter and scaffold protein (SASH1 gene) Length = 6998 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 640 ccttcagcctggcgagcgc 622
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 63 catgccgcgcacggtgcgccaga 85 |||||||||||||||| |||||| Sbjct: 775651 catgccgcgcacggtgggccaga 775673
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 gccgcgcacggtgcgccag 84 ||||||||||||||||||| Sbjct: 2456482 gccgcgcacggtgcgccag 2456464
>gb|AE011778.1| Xanthomonas axonopodis pv. citri str. 306, section 156 of 469 of the complete genome Length = 10029 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 gccgcgcacggtgcgccag 84 ||||||||||||||||||| Sbjct: 2794 gccgcgcacggtgcgccag 2812
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 gtgttcatccgcttgcgga 151 ||||||||||||||||||| Sbjct: 206680 gtgttcatccgcttgcgga 206662
>ref|XM_946204.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 10 (FLJ30092), mRNA Length = 10978 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_946203.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 9 (FLJ30092), mRNA Length = 9738 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_942665.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 8 (FLJ30092), mRNA Length = 11197 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>dbj|AK149872.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530024L05 product:SAM and SH3 domains containing protein 1 homolog [Mus musculus], full insert sequence Length = 3020 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 777 ccttcagcctggcgagcgc 759
>ref|XM_933574.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 7 (FLJ30092), mRNA Length = 9117 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_933569.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 6 (FLJ30092), mRNA Length = 10975 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_933565.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 5 (FLJ30092), mRNA Length = 9735 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_933563.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 4 (FLJ30092), mRNA Length = 1556 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 860 cagcctggccagcgcagcctcgc 838
>ref|XM_933560.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 3 (FLJ30092), mRNA Length = 10664 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_933557.1| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 2 (FLJ30092), mRNA Length = 8061 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>ref|XM_497354.2| PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 1 (FLJ30092), mRNA Length = 11197 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4351 cagcctggccagcgcagcctcgc 4329
>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence Length = 188458 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ttcatccgcttgcggagga 154 ||||||||||||||||||| Sbjct: 103421 ttcatccgcttgcggagga 103439
>emb|BX931917.1| Gallus gallus finished cDNA, clone ChEST790c21 Length = 758 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 gacggcttggtgttcatccgctt 146 ||||| ||||||||||||||||| Sbjct: 215 gacgggttggtgttcatccgctt 193
>ref|XM_579878.1| PREDICTED: Rattus norvegicus LOC498876 (LOC498876), mRNA Length = 642 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 124 gacggcttggtgttcatccgctt 146 ||||| ||||||||||||||||| Sbjct: 462 gacgggttggtgttcatccgctt 484
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 ggcgagcgcagcctcgccg 42 ||||||||||||||||||| Sbjct: 4708805 ggcgagcgcagcctcgccg 4708823
>ref|XM_344791.2| PREDICTED: Rattus norvegicus similar to SAM and SH3 domain containing protein 1 (Proline-glutamate repeat-containing protein) (LOC365037), mRNA Length = 7542 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 3058 ccttcagcctggcgagcgc 3040
>dbj|AK129216.1| Mus musculus mRNA for mKIAA0790 protein Length = 6475 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 159 ccttcagcctggcgagcgc 141
>dbj|AB014514.3| Homo sapiens mRNA for KIAA0614 protein, partial cds Length = 11211 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 4368 cagcctggccagcgcagcctcgc 4346
>ref|XM_314116.2| Anopheles gambiae str. PEST ENSANGP00000003748 (ENSANGG00000003004), partial mRNA Length = 7473 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 catgccgcgcacggtgcgc 81 ||||||||||||||||||| Sbjct: 2298 catgccgcgcacggtgcgc 2280
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 gccgcgcacggtgcgccag 84 ||||||||||||||||||| Sbjct: 2476787 gccgcgcacggtgcgccag 2476769
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 agcctcgccgcggggcgtcttgt 55 |||||||||||||| |||||||| Sbjct: 53820 agcctcgccgcgggccgtcttgt 53842
>gb|AC004031.1|AC004031 Homo sapiens 12q24 PAC RPCI1-261P5 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 74507 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 cagcctggcgagcgcagcctcgc 40 ||||||||| ||||||||||||| Sbjct: 58556 cagcctggccagcgcagcctcgc 58534
>ref|NM_175155.3| Mus musculus SAM and SH3 domain containing 1 (Sash1), mRNA Length = 6998 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ccttcagcctggcgagcgc 32 ||||||||||||||||||| Sbjct: 640 ccttcagcctggcgagcgc 622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 711,944 Number of Sequences: 3902068 Number of extensions: 711944 Number of successful extensions: 43633 Number of sequences better than 10.0: 246 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42564 Number of HSP's gapped (non-prelim): 1058 length of query: 154 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 132 effective length of database: 17,147,199,772 effective search space: 2263430369904 effective search space used: 2263430369904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)