>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 340    ggtgatcctgttttcggtgcac 361
              ||||||||||||||||||||||
Sbjct: 154018 ggtgatcctgttttcggtgcac 153997

>emb|CT025155.9| Mouse DNA sequence from clone RP23-228F18 on chromosome 16, complete
              sequence
          Length = 203093

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 481    ggttcaccacactgaaatcatc 502
              ||||||||||||||||||||||
Sbjct: 165658 ggttcaccacactgaaatcatc 165679

>dbj|AK113987.1| Ciona intestinalis cDNA, clone:cicl020j05, full insert sequence
          Length = 2187

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 612 atgctgcatttgtagcttctgc 633
           ||||||||||||||||||||||
Sbjct: 739 atgctgcatttgtagcttctgc 718

>ref|XM_525855.1| PREDICTED: Pan troglodytes similar to FLJ00204 protein (LOC470474),
            mRNA
          Length = 4731

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 558  ccaagctgtcccaaaccagca 578
            |||||||||||||||||||||
Sbjct: 2459 ccaagctgtcccaaaccagca 2439

>gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, complete sequence
          Length = 206056

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 606    tctgcaatgctgcatttgtag 626
              |||||||||||||||||||||
Sbjct: 109774 tctgcaatgctgcatttgtag 109754

>gb|AE013082.1| Thermoanaerobacter tengcongensis MB4, section 109 of 244 of the
             complete genome
          Length = 14022

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 230   aacagcaagtgataatggtgc 250
             |||||||||||||||||||||
Sbjct: 13692 aacagcaagtgataatggtgc 13672

>gb|AC140320.2| Mus musculus BAC clone RP23-401C13 from chromosome 19, complete sequence
          Length = 197365

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 606    tctgcaatgctgcatttgtag 626
              |||||||||||||||||||||
Sbjct: 146723 tctgcaatgctgcatttgtag 146743

>gb|AC109344.4| Homo sapiens BAC clone RP13-891P8 from 2, complete sequence
          Length = 87097

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   ccaagctgtcccaaaccagca 578
             |||||||||||||||||||||
Sbjct: 77543 ccaagctgtcccaaaccagca 77523

>emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chromosome 4, complete
             sequence
          Length = 230395

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 52    ggaggcatcaaagtagtttcaaaca 76
             ||||| |||||||||||||||||||
Sbjct: 57079 ggagggatcaaagtagtttcaaaca 57055

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     cggtgatcctgttttcggtg 358
               ||||||||||||||||||||
Sbjct: 4037976 cggtgatcctgttttcggtg 4037995

>gb|AC166162.6| Mus musculus BAC clone RP23-436K10 from chromosome 6, complete sequence
          Length = 181038

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gcttgcttccatctctctcc 339
             ||||||||||||||||||||
Sbjct: 28969 gcttgcttccatctctctcc 28988

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ggcaaagagctgggaataga 393
              ||||||||||||||||||||
Sbjct: 879025 ggcaaagagctgggaataga 879006

>ref|XM_676530.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8353.2), mRNA
          Length = 429

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 320 gcttgcttccatctctctccggtg 343
           |||||| |||||||||||||||||
Sbjct: 375 gcttgcctccatctctctccggtg 352

>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence
          Length = 250903

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   cctttgcctctgtttacaga 417
             ||||||||||||||||||||
Sbjct: 26254 cctttgcctctgtttacaga 26235

>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence
          Length = 176949

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    aagagctgggaatagatatg 397
              ||||||||||||||||||||
Sbjct: 100223 aagagctgggaatagatatg 100242

>gb|AC111117.15| Mus musculus chromosome 1, clone RP23-214P23, complete sequence
          Length = 201442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   aattgcatactacccaacatccag 170
             ||||||||| ||||||||||||||
Sbjct: 70229 aattgcatattacccaacatccag 70206

>ref|XM_570859.1| Cryptococcus neoformans var. neoformans JEC21 NBP35 (CNE03090)
           partial mRNA
          Length = 1011

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 ggcaaagagctgggaataga 393
           ||||||||||||||||||||
Sbjct: 844 ggcaaagagctgggaataga 863

>emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in linkage group 6,
              complete sequence
          Length = 178487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 58     atcaaagtagtttcaaacatctaatatt 85
              |||| |||||||||| ||||||||||||
Sbjct: 134231 atcacagtagtttcacacatctaatatt 134204

>gb|AC019117.4| Homo sapiens BAC clone RP11-507K12 from 7, complete sequence
          Length = 137228

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    acaatgatgcaagttacaat 131
              ||||||||||||||||||||
Sbjct: 128217 acaatgatgcaagttacaat 128236

>gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, complete sequence
          Length = 134825

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cctttgcctctgtttacaga 417
            ||||||||||||||||||||
Sbjct: 8538 cctttgcctctgtttacaga 8557

>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the 3'
              end of the gene for androgen-induced prostate proliferative
              shutoff associated protein (AS3) (CG008, FLJ23236,
              KIAA0979), complete sequence
          Length = 137246

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ctgggaatagatatgccttt 402
              ||||||||||||||||||||
Sbjct: 130547 ctgggaatagatatgccttt 130566

>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3'
              end of the KIAA0979 gene and part of a novel gene, complete
              sequence
          Length = 168487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ctgggaatagatatgccttt 402
              ||||||||||||||||||||
Sbjct: 130038 ctgggaatagatatgccttt 130057

>emb|CR861477.1| Human DNA sequence from clone XX-NCIH2171_4G20, complete sequence
          Length = 121004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 596   tgcccagatgtctgcaatgctgca 619
             |||||||||||||||||| |||||
Sbjct: 35587 tgcccagatgtctgcaatcctgca 35564

>emb|CR856000.1| Human DNA sequence from clone XX-NCIH2171_4H19, complete sequence
          Length = 121005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 596   tgcccagatgtctgcaatgctgca 619
             |||||||||||||||||| |||||
Sbjct: 35587 tgcccagatgtctgcaatcctgca 35564

>emb|CR812473.1| Human DNA sequence from clone XX-NCIH2171_18L10, complete sequence
          Length = 128736

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 596   tgcccagatgtctgcaatgctgca 619
             |||||||||||||||||| |||||
Sbjct: 39458 tgcccagatgtctgcaatcctgca 39435

>gb|AC009711.10| Homo sapiens chromosome 15, clone RP11-356B18, complete sequence
          Length = 205925

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   cctttgcctctgtttacaga 417
             ||||||||||||||||||||
Sbjct: 10838 cctttgcctctgtttacaga 10857

>emb|CR626938.1| Human DNA sequence from clone XX-NCIH2171_5AA20, complete sequence
          Length = 111651

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 596   tgcccagatgtctgcaatgctgca 619
             |||||||||||||||||| |||||
Sbjct: 64187 tgcccagatgtctgcaatcctgca 64210

>gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, complete sequence
          Length = 157672

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 596   tgcccagatgtctgcaatgctgca 619
             |||||||||||||||||| |||||
Sbjct: 34258 tgcccagatgtctgcaatcctgca 34235

>gb|AC100770.2| Homo sapiens chromosome 11, clone RP11-46P12, complete sequence
          Length = 165585

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gcaaggaaaccacaatgatg 120
             ||||||||||||||||||||
Sbjct: 99934 gcaaggaaaccacaatgatg 99953

>gb|AC090592.5| Homo sapiens chromosome 11, clone RP11-405K6, complete sequence
          Length = 168469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gcaaggaaaccacaatgatg 120
             ||||||||||||||||||||
Sbjct: 59501 gcaaggaaaccacaatgatg 59520

>ref|XM_397003.2| PREDICTED: Apis mellifera similar to ENSANGP00000005626
           (LOC413562), mRNA
          Length = 5088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 gtggacctatgcaacagcaa 237
           ||||||||||||||||||||
Sbjct: 328 gtggacctatgcaacagcaa 309

>gb|AC134529.6| Mus musculus BAC clone RP24-503A2 from chromosome 6, complete sequence
          Length = 166392

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gcttgcttccatctctctcc 339
             ||||||||||||||||||||
Sbjct: 99675 gcttgcttccatctctctcc 99694

>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence
          Length = 231581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 58     atcaaagtagtttcaaacatctaatatt 85
              |||| |||||||||| ||||||||||||
Sbjct: 179196 atcacagtagtttcacacatctaatatt 179169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,350,949
Number of Sequences: 3902068
Number of extensions: 5350949
Number of successful extensions: 93321
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93227
Number of HSP's gapped (non-prelim): 94
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)