ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8l04 |
|---|---|
| Clone Library Name | barley_pub |
>GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29)| (GST class-phi) Length = 213 Score = 98.2 bits (243), Expect = 5e-21 Identities = 48/57 (84%), Positives = 50/57 (87%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 NL K+K VL VYEARLTK KYLAGDFLSLADLNH SVTLCL ATPYAS+ DAYPHVK Sbjct: 134 NLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVK 190
>GSTH2_ORYSA (O82451) Probable glutathione S-transferase GSTF2 (EC 2.5.1.18)| (GST-II) Length = 214 Score = 87.0 bits (214), Expect = 1e-17 Identities = 40/57 (70%), Positives = 49/57 (85%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 NL K+K VL VYEARLTK KYLAGD++S+ADL+H + T+CL ATP+AS+ DAYPHVK Sbjct: 135 NLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVK 191
>GSTH1_ORYSA (O65857) Probable glutathione S-transferase GSTF1 (EC 2.5.1.18)| (GST-I) Length = 219 Score = 78.2 bits (191), Expect = 6e-15 Identities = 37/54 (68%), Positives = 42/54 (77%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 K+K VL VYEARL++S YLAGDF+S ADLNH T TPYASLFD+YPHVK Sbjct: 142 KLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVK 195
>GSTF2_WHEAT (P30111) Glutathione S-transferase 2 (EC 2.5.1.18) (GST class-phi)| Length = 291 Score = 69.7 bits (169), Expect = 2e-12 Identities = 32/57 (56%), Positives = 40/57 (70%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 +L +++ VL +YEARL KS+YLAGD +S ADLNH T TPYA +FD YP VK Sbjct: 144 SLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVK 200
>GSTF1_WHEAT (P30110) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 229 Score = 68.2 bits (165), Expect = 6e-12 Identities = 31/57 (54%), Positives = 40/57 (70%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 +L +++ VL +YEARL KS+YLAGD ++ ADLNH T TPYA +FD YP VK Sbjct: 144 SLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVK 200
>GSTF4_MAIZE (P46420) Glutathione S-transferase IV (EC 2.5.1.18) (GST-IV)| (GST-27) (GST class-phi) Length = 222 Score = 66.6 bits (161), Expect = 2e-11 Identities = 34/56 (60%), Positives = 40/56 (71%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 N+ K+K VL VYEARL YLAGDFLSLADL+ ++ CL AT YA+L A PHV Sbjct: 136 NVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHV 191
>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| (25 kDa auxin-binding protein) Length = 212 Score = 55.8 bits (133), Expect = 3e-08 Identities = 30/56 (53%), Positives = 35/56 (62%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 N K+ VL VYE+RL SKYL GD +LADL+HA L T SLFD+ PHV Sbjct: 136 NEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHV 191
>GSTF6_ARATH (Q96266) Glutathione S-transferase 6 (EC 2.5.1.18) (GST class phi)| Length = 215 Score = 50.8 bits (120), Expect = 1e-06 Identities = 27/53 (50%), Positives = 34/53 (64%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 K++ VL VYEARL KS++LAGD +LADL+H L T LFD+ P V Sbjct: 141 KLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKV 193
>GSTF1_ARATH (P42760) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 208 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/53 (50%), Positives = 31/53 (58%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 K+ VL VYE RL +SKYLA D +L DL+ V L TP LFD PHV Sbjct: 139 KLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHV 191
>GST16_ARATH (Q9SLM6) Glutathione S-transferase 16 (EC 2.5.1.18) (GST class-phi)| Length = 212 Score = 48.5 bits (114), Expect = 5e-06 Identities = 26/53 (49%), Positives = 31/53 (58%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 K+ VL VYEARL + KYLAG+ +L DL+H V L TP LF P V Sbjct: 143 KLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRV 195
>GSTF3_MAIZE (P04907) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST| class-phi) Length = 221 Score = 47.4 bits (111), Expect = 1e-05 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASV-TLCLAATPYASLFDAYPHVK 3 ++ VL VYEA L ++KYLAGD +LAD NHA + L A P A PHVK Sbjct: 138 QLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVK 192
>GSTF2_TOBAC (P46440) Glutathione S-transferase APIC (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -2 Query: 167 VKIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 V++ VL +YE RL +SKYL GD +L DL+H L +T +FD+ P V Sbjct: 138 VQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRV 191
>GSTF4_ARATH (P46422) Glutathione S-transferase PM24 (EC 2.5.1.18) (24 kDa| auxin-binding protein) (GST class-phi) Length = 211 Score = 47.0 bits (110), Expect = 1e-05 Identities = 25/53 (47%), Positives = 30/53 (56%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 K+ VL VYEARL + KYLAG+ +L DL+H L TP LF P V Sbjct: 142 KLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRV 194
>GSTF3_ARATH (P42761) Glutathione S-transferase ERD13 (EC 2.5.1.18) (GST| class-phi) Length = 214 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVT 60 K+ VL VYEA+L+K++YLAGDF+SLADL H T Sbjct: 137 KLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFT 171
>GST11_ARATH (Q9SRY5) Glutathione S-transferase 11 (EC 2.5.1.18) (GST class-phi)| Length = 209 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/53 (49%), Positives = 30/53 (56%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 K+ VL VYE RL +SKYLA D +L DL+ V L TP LF PHV Sbjct: 140 KLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFAERPHV 192
>GSTF_SILCU (Q04522) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 216 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = -2 Query: 173 NLVKIKXVLAVYEARLTKSKYL-AGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 N K+ VL VYEARLT+S+YL A D +L DL+H + L T LF+ HV Sbjct: 137 NEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHV 193
>GSTF1_TOBAC (P30109) Glutathione S-transferase PARB (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/53 (37%), Positives = 31/53 (58%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHV 6 ++ VL +YE +L +SKYL GD +L DL+H L ++ +FD+ P V Sbjct: 139 QLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRV 191
>GSTF7_ARATH (Q96324) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 214 Score = 37.7 bits (86), Expect = 0.009 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = -2 Query: 167 VKIKXVLAVYEARLTKSKYLAGDFLSLADLNH 72 VK VL VYE RL ++YL GD +LADL+H Sbjct: 138 VKFDKVLDVYENRLATNRYLGGDEFTLADLSH 169
>GSTF_BRAOT (P48438) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| (Fragments) Length = 76 Score = 35.4 bits (80), Expect = 0.042 Identities = 20/34 (58%), Positives = 22/34 (64%) Frame = -2 Query: 161 IKXVLAVYEARLTKSKYLAGDFLSLADLNHASVT 60 + VL VYEA L YLAGDF+SLADL H T Sbjct: 41 LSAVLDVYEAHL--HGYLAGDFVSLADLAHLPFT 72
>GSTF5_ARATH (P42769) Glutathione S-transferase PM239X14 (EC 2.5.1.18) (GST| class-phi) Length = 218 Score = 35.0 bits (79), Expect = 0.055 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = -2 Query: 140 YEARLTKSKYLAGDFLSLADLNHASVTLCLAATPYASLFDAYPHVK 3 YE L+K KYLAG+ +LADL H + A ++ D+ PHVK Sbjct: 151 YERILSKQKYLAGNDFTLADLFHLPYG-AMVAQLEPTVLDSKPHVK 195
>RSMB_XANCP (Q8P4G1) Ribosomal RNA small subunit methyltransferase B (EC| 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) Length = 437 Score = 28.9 bits (63), Expect = 4.0 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 58 RVTDAWLRSARLRKSPARYLDLVSRASYTASTXLIL 165 R+ WLR R R SPA Y+ ++ TA T +L Sbjct: 171 RMAPMWLRVPRARVSPAEYVARLAEQGITAHTDPVL 206
>PROA_CORJK (Q4JWT3) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 434 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +3 Query: 48 RQAQGDRRMVKVRKAEEVSSQVL 116 RQA+ D + K +KA+EVSSQ+L Sbjct: 16 RQAERDEVLAKAKKAKEVSSQLL 38
>IQCB1_HUMAN (Q15051) IQ calmodulin-binding motif-containing protein 1| (Nephrocystin-5) Length = 598 Score = 28.1 bits (61), Expect = 6.8 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 169 LLRSXTCWRCTRRGSPSPSTWLETSSALRTLTMRLSPCAWR 47 LLR TC++ RR T E S LR L LSP ++ Sbjct: 247 LLRQSTCYKGLRRLLSKQETGTEFSQELRQLVGLLSPMVYQ 287
>SC11A_MOUSE (Q9R053) Sodium channel protein type 11 alpha subunit (Sodium| channel protein type XI alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.9) (Sensory neuron sodium channel 2) (NaN) Length = 1765 Score = 27.7 bits (60), Expect = 8.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -3 Query: 166 LRSXTCWRCTRRGSPSPSTWLETSSALRTLTMRLSPCAWRPHPMHLCL 23 L++ C RC R+ SP P+ E+ + T L +W+ + + L Sbjct: 838 LQNFCCKRCRRQNSPKPNEATESFAGESRDTATLDTRSWKEYDSEMTL 885
>GSTT4_MUSDO (P46433) Glutathione S-transferase 4 (EC 2.5.1.18) (GST| class-theta) Length = 210 Score = 27.7 bits (60), Expect = 8.8 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 164 KIKXVLAVYEARLTKSKYLAGDFLSLADL 78 K + L L++SKY AGD L+LADL Sbjct: 130 KFEVTLDFLNTFLSESKYAAGDSLTLADL 158
>EF1G2_YEAST (P36008) Elongation factor 1-gamma 2 (EF-1-gamma 2) (Translation| elongation factor 1B gamma 2) (Eukaryotic elongation factor 1Bgamma 2) (eEF1Bgamma 2) Length = 412 Score = 27.7 bits (60), Expect = 8.8 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 167 VKIKXVLAVYEARLTKSKYLAGDFLSLADLNHA 69 VKI + AV++ARL ++A + +SL DL+ A Sbjct: 131 VKIDNLAAVFDARLRDYTFVATENISLGDLHAA 163
>CNTN6_RAT (P97528) Contactin-6 precursor (Neural recognition molecule NB-3)| Length = 1028 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Frame = -3 Query: 148 WRCTRRGSPSPS-TWLETSSALRT 80 W C G+P+PS TWL+ L T Sbjct: 337 WECKASGNPNPSYTWLKNGERLNT 360
>CNTN6_MOUSE (Q9JMB8) Contactin-6 precursor (Neural recognition molecule NB-3)| (mNB-3) Length = 1028 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Frame = -3 Query: 148 WRCTRRGSPSPS-TWLETSSALRT 80 W C G+P+PS TWL+ L T Sbjct: 337 WECKASGNPNPSYTWLKNGQRLNT 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,972,616 Number of Sequences: 219361 Number of extensions: 279263 Number of successful extensions: 1164 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 1155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1163 length of database: 80,573,946 effective HSP length: 33 effective length of database: 73,335,033 effective search space used: 1760040792 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
