| Clone Name | rbags8j15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 504 bits (254), Expect = e-139 Identities = 287/297 (96%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 24 cttttccccggtaaaaaacacacagcacatcatgctgcatcgcacgcacgcatgcagctg 83 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2350 cttttccccggtaaaattcacacagcacatcatgctgcatcgcacgcacgcatgcagctg 2291 Query: 84 agcatcaacagccgacggcggcggncgggcaatcaacggccagctcacaggctgggcacc 143 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2290 agcatcaacagccgacggcggcggacgggcaatcaacggccagctcacaggctgggcacc 2231 Query: 144 ctctcggcggcgccgggagatgacggtgagcaggttgttgccgaaggggtcgctgnggtg 203 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2230 ctctcggcggcgcc-ggagatgacggtgagcaggttgttgccgaaggggtcgctgaggtg 2172 Query: 204 ggcgcacaggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagccca 263 |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2171 ggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctggatgaag-aagccca 2113 Query: 264 gcatggataacatggccagccgnccgttcttgatctccttcaccttgagcagcgccg 320 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2112 gcatggagaacatggccagccgtccgttcttgatctccttcaccttgagcagcgccg 2056
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 40261 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 40203 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 40202 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 40143 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 40142 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 40084 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 40083 cagcagcgccg 40073
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7581175 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 7581117 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 7581116 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 7581057 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 7581056 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 7580998 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 7580997 cagcagcgccg 7580987
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 940 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 882 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 881 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 822 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 821 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 763 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 762 cagcagcgccg 752
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 930 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 872 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 871 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 812 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 811 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 753 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 752 cagcagcgccg 742
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 941 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 883 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 882 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 823 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 822 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 764 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 763 cagcagcgccg 753
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 228 bits (115), Expect = 9e-57 Identities = 173/191 (90%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7651262 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 7651204 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 7651203 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 7651144 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 7651143 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcacctt 7651085 Query: 310 gagcagcgccg 320 |||||||||| Sbjct: 7651084 cagcagcgccg 7651074
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 224 bits (113), Expect = 1e-55 Identities = 174/193 (90%), Gaps = 2/193 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 395 acaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 337 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | | ||||| | || ||| |||||||||||||||||||||||| Sbjct: 336 gggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgg 277 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||| ||| Sbjct: 276 atgaag-aaccccagcatggagaacatggccagccgcccgttcttgatctccttcaactt 218 Query: 310 gagcagcgccgtc 322 |||||||||||| Sbjct: 217 cagcagcgccgtc 205
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 186 bits (94), Expect = 3e-44 Identities = 164/186 (88%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 127 ctcacaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccg 186 |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1028 ctcacaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccg 970 Query: 187 aaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcc 246 |||||||||||| |||| | ||||| | || ||| || |||||||||||||||||| Sbjct: 969 aaggggtcgctgaggtgcttggcgaggttctcgacggggccttcgccggtgacgtaggcc 910 Query: 247 tggatgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcac 306 ||||||||| ||| | | |||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 909 tggatgaag-aaggcgaacatggagaacatggcgagccggccgttcttgatctccttcac 851 Query: 307 cttgag 312 |||||| Sbjct: 850 cttgag 845
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 186 bits (94), Expect = 3e-44 Identities = 164/186 (88%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 127 ctcacaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccg 186 |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 886 ctcacaggctgggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccg 828 Query: 187 aaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcc 246 |||||||||||| |||| | ||||| | || ||| || |||||||||||||||||| Sbjct: 827 aaggggtcgctgaggtgcttggcgaggttctcgacggggccttcgccggtgacgtaggcc 768 Query: 247 tggatgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcac 306 ||||||||| ||| | | |||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 767 tggatgaag-aaggcgaacatggagaacatggcgagccggccgttcttgatctccttcac 709 Query: 307 cttgag 312 |||||| Sbjct: 708 cttgag 703
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 157 bits (79), Expect = 3e-35 Identities = 164/191 (85%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 |||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 193 acaggctgggtgccctctcggcggcaccag-agatgacggtgagcaggttgttgccgaag 135 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | ||||| | || ||| ||| |||| ||||||||||||||| Sbjct: 134 gggtcgctgaggtgcttggcgaggttctcgacgggacccccgcctgtgacgtaggcctgg 75 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 || ||| ||| | | |||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 74 ataaag-aaggcgaacatggagaacatggccagcctgccgttcttgatctccttcacctt 16 Query: 310 gagcagcgccg 320 |||||| |||| Sbjct: 15 gagcagagccg 5
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 157 bits (79), Expect = 3e-35 Identities = 158/183 (86%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 130 acaggctgggcaccctctcggcggcgccgggagatgacggtgagcaggttgttgccgaag 189 ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 881 acaggctaggcgtcctctcggcggcgccgg-agatgacggtgagcaggttgttgccgaag 823 Query: 190 gggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggtgacgtaggcctgg 249 ||||||||| |||| | ||||| | | ||| || ||||||||||||||||||||| Sbjct: 822 gggtcgctgaggtgcttggcgaggttctccacggggccttcgccggtgacgtaggcctgg 763 Query: 250 atgaagnaagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||| | | |||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 762 atgaag-aaggcgaacatggagaacatcgcgagccggccgttcttgatctccttcacctt 704 Query: 310 gag 312 ||| Sbjct: 703 gag 701
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 85.7 bits (43), Expect = 8e-14 Identities = 86/100 (86%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||||||| |||||| | |||| ||||| | ||||| Sbjct: 1462 caggttctcgatggggcccttgccggtgacgatggcctgaacgaag-aagccgaacatgg 1404 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | |||||||||||||| ||||||||||||||||||||||| Sbjct: 1403 agaacatggccagccgcccgttcttgatctccttcacctt 1364
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 713 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 655 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 654 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 612
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 10793709 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 10793651 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 10793650 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 10793608 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 278 gccagccgnccgttcttgatctccttcacctt 309 ||||| || ||||||||||||||||||||||| Sbjct: 7133596 gccaggcgaccgttcttgatctccttcacctt 7133565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 23604256 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 23604198 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 23604197 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 23604155 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 30025050 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 30024992 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 30024991 gcggccgttcttgatctccttcaccttgagc 30024961
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 17432 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 17374 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 17373 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 17331
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 66955 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 66897 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 66896 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 66854
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 130327 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 130269 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 130268 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 130226
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 784 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 726 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 725 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 683
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 783 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 725 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 724 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 682
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 1213 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 1155 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 1154 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 1112
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 777 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 719 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 718 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 676
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 724 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 723 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 681
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 784 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 726 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 725 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 683
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 724 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 723 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 681
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 83.8 bits (42), Expect = 3e-13 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 724 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 723 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 681
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 713 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 655 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 654 gcggccgttcttgatctccttcaccttgagc 624
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 13961 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 14019 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 14020 gcggccgttcttgatctccttcaccttgagc 14050
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 21040 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 20982 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 20981 gcggccgttcttgatctccttcaccttgagc 20951
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 794 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 736 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 735 gcggccgttcttgatctccttcaccttgagc 705
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 794 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 736 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 735 gcggccgttcttgatctccttcaccttgagc 705
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 796 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 738 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 737 gcggccgttcttgatctccttcaccttgagc 707
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||||||| |||||||| |||| || || | |||||| |||||||| || Sbjct: 796 ggccccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgag 738 Query: 283 ccgnccgttcttgatctccttcaccttgagc 313 || ||||||||||||||||||||||||||| Sbjct: 737 gcggccgttcttgatctccttcaccttgagc 707
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 719 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 661 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||||||||| || ||||||||||||||||||||||| Sbjct: 660 agaacatggccaggcggccgttcttgatctccttcacctt 621
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 720 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 662 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||||||||| || ||||||||||||||||||||||| Sbjct: 661 agaacatggccaggcggccgttcttgatctccttcacctt 622
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 714 caggttctggacggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 656 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||||||||| || ||||||||||||||||||||||| Sbjct: 655 agaacatggccaggcggccgttcttgatctccttcacctt 616
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 748 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 690 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||||||||| || ||||||||||||||||||||||| Sbjct: 689 agaacatggccaggcggccgttcttgatctccttcacctt 650
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 1590 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 1532 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||||||||| || ||||||||||||||||||||||| Sbjct: 1531 agaacatggccaggcggccgttcttgatctccttcacctt 1492
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 79045 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 79103 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 79104 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 79146
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 21808771 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 21808713 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 21808712 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 21808670
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 1174 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 1116 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 1115 gaacatggcgaggcggccgttcttgatcttcttcaccttgagc 1073
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||| | |||| ||||| | |||||| Sbjct: 791 aggttctcgagggggcccttgccggtgacgatggcctgcacgaag-aagccgaacatgga 733 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 732 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 690
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 21801800 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 21801742 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 21801741 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 21801699
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 770 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 712 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 711 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 669
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 345 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 287 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 286 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 244
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 759 aggttctcgatggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 701 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 700 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 658
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 75.8 bits (38), Expect = 8e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 714 catggataacatggcgaggcggccgttcttgatctccttcaccttgagc 666
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 75.8 bits (38), Expect = 8e-11 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| ||||| | |||||| Sbjct: 763 aggttctcgagggggcccttgccggtgacgatggcctggacgaag-aagccgaacatgga 705 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || || |||||||||||||||||||||||| Sbjct: 704 gaacatggcgaggcggcctttcttgatctccttcaccttgagc 662
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 737 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 736 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 678 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 677 tctccttgaccttgagc 661
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 760 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 702 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 701 tctccttgaccttgagc 685
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 760 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 702 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 701 tctccttgaccttgagc 685
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 822 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 763 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 762 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 704 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 703 tctccttgaccttgagc 687
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 768 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 767 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 709 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 708 tctccttgaccttgagc 692
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 860 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 801 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 800 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 742 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 741 tctccttgaccttgagc 725
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 73.8 bits (37), Expect = 3e-10 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 226 ccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccg 285 |||| |||||| ||| |||||||| |||| ||||| | |||||| ||||||||||| || Sbjct: 758 cccttgccggtcacgatggcctggacgaag-aagccgaacatggagaacatggccaggcg 700 Query: 286 nccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 699 gccgttcttgatctccttcacctt 676
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 22434833 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 22434774 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 22434773 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 22434715 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 22434714 tctccttgaccttgagc 22434698 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 23305209 catggcgagccgcccgttcttgatctcctt 23305180
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 95900 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 95841 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 95840 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 95782 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 95781 tctccttgaccttgagc 95765
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 73.8 bits (37), Expect = 3e-10 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 226 ccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccg 285 |||| |||||||||| |||||||| |||| ||||| | |||||| |||||||| || || Sbjct: 1592 cccttgccggtgacgatggcctggacgaag-aagccgaacatggaaaacatggcgaggcg 1534 Query: 286 nccgttcttgatctccttcaccttgagc 313 |||||||||| |||||||||||||||| Sbjct: 1533 gccgttcttgagctccttcaccttgagc 1506
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 737 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 736 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 678 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 677 tctccttgaccttgagc 661
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 760 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 702 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 701 tctccttgaccttgagc 685
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 760 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 702 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 701 tctccttgaccttgagc 685
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 765 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 707 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 706 tctccttgaccttgagc 690
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 768 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 767 gacgatggcctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 709 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 708 tctccttgaccttgagc 692
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| || |||| || | ||||| | || ||| |||| |||||| Sbjct: 785 gttgttggcgacggggtcggtgacgtggtcgaagaggttctcgatggggcccttgccggt 726 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| |||||||| |||| || || | |||||| |||||||| || || |||||||||| Sbjct: 725 gacgatggcctggacgaag-aatccgaacatggagaacatggcgaggcggccgttcttga 667 Query: 297 tctccttcaccttgagc 313 |||||||||||||||| Sbjct: 666 gctccttcaccttgagc 650
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/87 (86%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 223 ggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccag 282 ||||||| |||||| ||| ||||||| |||| ||||| | |||||||||||||||||| Sbjct: 387 ggccccttgccggtcacgatcgcctggacgaag-aagccgaacatggataacatggccag 329 Query: 283 ccgnccgttcttgatctccttcacctt 309 || || |||||||||||||||||||| Sbjct: 328 cctgccattcttgatctccttcacctt 302
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 69.9 bits (35), Expect = 5e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 431 aacatggccagacgaccgttcttgatctccttcaccttgagc 390
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 69.9 bits (35), Expect = 5e-09 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 702 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 644 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||| ||||| || ||||||||||||||||||||||| Sbjct: 643 agaacatagccaggcggccgttcttgatctccttcacctt 604
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/103 (83%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| | ||| | | |||| Sbjct: 313 aggttctcgagggggcccttgccggtgacgatggcctggacgaagca-gccgaacctgga 255 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 254 gaacatggcgaggcggccgttcttgatctccttcaccttgagc 212
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/94 (85%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 220 aagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggc 279 ||||| |||| |||||||||| |||||||| |||| ||||| | |||||| |||||||| Sbjct: 782 aaggggcccttgccggtgacgatggcctggacgaag-aagccgaacatggagaacatggc 724 Query: 280 cagccgnccgttcttgatctccttcaccttgagc 313 || || || |||||||||||||| ||||||||| Sbjct: 723 gaggcggccattcttgatctccttgaccttgagc 690
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 69.9 bits (35), Expect = 5e-09 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 718 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 660 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||| ||||| || ||||||||||||||||||||||| Sbjct: 659 agaacatagccaggcggccgttcttgatctccttcacctt 620
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 69.9 bits (35), Expect = 5e-09 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 1399 caggttctggatggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 1341 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||||| ||||| || ||||||||||||||||||||||| Sbjct: 1340 agaacatagccaggcggccgttcttgatctccttcacctt 1301
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 668 catggagaacatggccaggcggccgttcttgatctccttcacctt 624
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 2943 catggagaacatggccagccgaccgttcttaatctccttcacctt 2899
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 762 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 718
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1376 catggagaacatggccaggcggccgttcttgatctccttcacctt 1332
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 648
>gb|M37489.1|PINCABII2 Pinus sylvestris chlorophyll a/b-binding protein (Cab) mRNA, partial cds Length = 583 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 329 catggagaacatggccagccgaccgttcttaatctccttcacctt 285
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 738 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 694
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 583 catggagaacatcgccagccgtccgttcttgatctccttcacctt 539
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 67.9 bits (34), Expect = 2e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || || ||||||||||||||||||||||||||| Sbjct: 2595 catggagaacatggcgaggcggccgttcttgatctccttcaccttgagc 2547
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 221 agggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggcc 280 |||| ||||||||||| ||||||| ||||| | | |||||||||| ||| | ||||||| Sbjct: 827 aggggccctcgccggtcacgtaggactggacggcg-aagcccagcacggagaccatggcc 769 Query: 281 agccgnccgttcttgatctccttcacctt 309 || || ||||||||||||||||| ||||| Sbjct: 768 aggcggccgttcttgatctccttgacctt 740 Score = 46.1 bits (23), Expect = 0.069 Identities = 29/31 (93%) Strand = Plus / Minus Query: 165 gacggtgagcaggttgttgccgaaggggtcg 195 |||||| |||||||||| ||||||||||||| Sbjct: 883 gacggtcagcaggttgtagccgaaggggtcg 853
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 67.9 bits (34), Expect = 2e-08 Identities = 86/103 (83%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||| | |||| ||||| | |||||| Sbjct: 755 aggttctcgatggggcccttgccggtgacgatggcctgcacgaag-aagccgaacatgga 697 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 696 gaacatggcaaggcggccgttcttgagctccttcaccttgagc 654
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 1840 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 1796
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 747 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 703
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 86/103 (83%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||| | |||| ||||| | |||||| Sbjct: 403 aggttctcgatggggcccttgccggtgacgatggcctgcacgaag-aagccgaacatgga 345 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 344 gaacatggcaaggcggccgttcttgagctccttcaccttgagc 302
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 67.9 bits (34), Expect = 2e-08 Identities = 86/103 (83%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 211 aggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgga 270 ||||| | || ||| |||| |||||||||| |||||||| |||| || || | |||||| Sbjct: 505 aggttctcgatgggtcccttgccggtgacgatggcctggacgaag-aacccaaacatgga 447 Query: 271 taacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || |||||||||| |||||||||||||||| Sbjct: 446 gaacatggcgaggcggccgttcttgagctccttcaccttgagc 404
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 163 catggaaaacatggccaaccgcccgttcttgatctccttcacctt 119
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 615 catggagaacatggccagccgcccgttctttatctccttcacctt 571
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1069 catggagaacatggccaggcgtccgttcttgatctccttcacctt 1025
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 652 catggagaacatggccaggcggccgttcttgatctccttcacctt 608
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 67.9 bits (34), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 1289 catggagaacatggccaggcggccgttcttgatctccttcacctt 1245
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 65.9 bits (33), Expect = 7e-08 Identities = 111/137 (81%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 177 gttgttgccgaaggggtcgctgnggtgggcgcacaggttntngaagggcccctcgccggt 236 ||||||| ||| ||||||| | ||||| || |||||| | ||||| |||| |||||| Sbjct: 821 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 762 Query: 237 gacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgttcttga 296 |||| || ||||| |||| ||||| | |||||| |||||||| || || || ||||||| Sbjct: 761 gacgatggtctggacgaag-aagccgaacatggagaacatggcgaggcggccattcttga 703 Query: 297 tctccttcaccttgagc 313 ||||||| ||||||||| Sbjct: 702 tctccttgaccttgagc 686
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 65.9 bits (33), Expect = 7e-08 Identities = 35/36 (97%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttcacctt 309 |||||||||||| ||||||||||||||||||||||| Sbjct: 236 catggccagccggccgttcttgatctccttcacctt 201
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 63.9 bits (32), Expect = 3e-07 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 226 ccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccg 285 |||| |||||||||| |||||||| |||| || |||| |||||| |||||||| || || Sbjct: 751 cccttgccggtgacgatggcctggacgaagaaa-cccaacatggagaacatggcgaggcg 693 Query: 286 nccgttcttgatctccttcaccttga 311 ||||| |||| |||||||||||||| Sbjct: 692 gccgttattgaactccttcaccttga 667
>gb|U51634.1|PPU51634 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 252 Score = 63.9 bits (32), Expect = 3e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacc 307 |||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 43 catggagaacatggccagccgaccgttcttaatctccttcacc 1
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 61.9 bits (31), Expect = 1e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 ||||||||||| || ||||||||||||||||||||||| Sbjct: 660 aacatggccaggcggccgttcttgatctccttcacctt 623
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcac 306 |||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 773 catggagaacatggccaaccgtccgttcttgatctccttcac 732
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 670 aacatggcaaggcggccgttcttgatctccttcaccttgagc 629
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 686 aacatggcaaggcggccgttcttgatctccttcaccttgagc 645
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcac 306 |||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 766 catggagaacatggccaaccgtccgttcttgatctccttcac 725
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 226 ccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccg 285 |||| |||||||||| |||||||| |||| || || | |||||| |||||||| || || Sbjct: 722 cccttgccggtgacgatggcctggacgaag-aacccgaacatggagaacatggcgaggcg 664 Query: 286 nccgttcttgatctccttcaccttga 311 |||||||||| |||||||||||||| Sbjct: 663 gccgttcttgagctccttcaccttga 638
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| || || ||||||||||||||||||||||||||| Sbjct: 677 aacatggcaaggcgaccgttcttgatctccttcaccttgagc 636
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 60.0 bits (30), Expect = 5e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 257 aagcccagcatggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||||||| | ||||||||| || |||||||| | |||||||||||||||| Sbjct: 4917 aagcccagcatggccaccatggccaggcggccgttcttcagctccttcaccttgagc 4861 Score = 60.0 bits (30), Expect = 5e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 257 aagcccagcatggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||||||| | ||||||||| || |||||||| | |||||||||||||||| Sbjct: 1474 aagcccagcatggccaccatggccaggcggccgttcttcagctccttcaccttgagc 1418 Score = 58.0 bits (29), Expect = 2e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttcacctt 309 |||||||||||| |||||||||| |||||||||||| Sbjct: 7000 catggccagccggccgttcttgacctccttcacctt 6965 Score = 58.0 bits (29), Expect = 2e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttcacctt 309 |||||||||||| |||||||||| |||||||||||| Sbjct: 216 catggccagccggccgttcttgacctccttcacctt 181 Score = 50.1 bits (25), Expect = 0.004 Identities = 45/52 (86%) Strand = Plus / Minus Query: 259 gcccagcatggataacatggccagccgnccgttcttgatctccttcaccttg 310 ||||||||||| | ||||||||| || |||||||| | ||||||||||||| Sbjct: 3759 gcccagcatggccagcatggccaggcggccgttcttcacctccttcaccttg 3708
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgatctccttcacctt 648
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgatctccttcacctt 648
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 681 catggaaaacatggccaagcgcccgttcttgatctccttcacctt 637
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgatctccttcacctt 648
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgatctccttcacctt 648
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||||||| |||||||| | |||||||||||| Sbjct: 748 catggagaacatggccagccgcccgttctttagctccttcacctt 704
>gb|AF139465.2|AF139465 Vigna radiata LHCII type III chlorophyll a/b binding protein (CipLhcb3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1047 Score = 60.0 bits (30), Expect = 5e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 745 catggagaacatggccagccttccattcttgatctccttcactttgagc 697
>emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 Score = 60.0 bits (30), Expect = 5e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 72 catggaaaacattgcaagacgaccgttcttgatctccttcaccttgagc 120
>emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b binding protein Length = 978 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||||||| |||||||| ||||| |||||||| Sbjct: 724 catggagaacatggccagccgaccgttcttaatctctttcacctt 680
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| |||||||| |||||||| |||||||||||||| Sbjct: 464 catggagaacatcgccagccgcccgttcttaatctccttcacctt 420
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 60.0 bits (30), Expect = 5e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 849 catggagaacatggccaggcgtccgttcttgatctccttgacctt 805
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 60.0 bits (30), Expect = 5e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 1620 catggagaacatagcgagacgcccgttcttgatctccttcaccttgagc 1572
>gb|L29644.1|EGRLHCPII Euglena gracilis chlorophyll a/b binding protein (LHCPII) gene exons 1-5, 5' end Length = 3122 Score = 60.0 bits (30), Expect = 5e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 257 aagcccagcatggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||||||| | ||||||||| || |||||||| | |||||||||||||||| Sbjct: 2926 aagcccagcatggccaccatggccagacggccgttcttcacctccttcaccttgagc 2870
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 58.0 bits (29), Expect = 2e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttcaccttgagc 313 ||||||||| || ||||||||||||||||| ||||||||| Sbjct: 1442 catggccaggcggccgttcttgatctccttaaccttgagc 1403
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 58.0 bits (29), Expect = 2e-05 Identities = 67/79 (84%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 231 gccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgt 290 |||||||||| |||||||| |||| || || | |||||| ||||||||||| || |||| Sbjct: 778 gccggtgacgatggcctggacgaagaaa-ccgaacatggagaacatggccaggcggccgt 720 Query: 291 tcttgatctccttcacctt 309 |||||| |||||| ||||| Sbjct: 719 tcttgagctccttaacctt 701
>gb|AY786530.1| Haematococcus pluvialis chloroplast major light-harvesting complex II protein m9 mRNA, partial cds; nuclear gene for chloroplast product Length = 577 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| ||| ||||||||||||||||| ||||| Sbjct: 330 aacatggccaaccgcccgttcttgatctccttgacctt 293
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 232 ccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgtt 291 ||||||||| |||||||| |||| || || | |||||| |||||||| || || || || Sbjct: 1716 ccggtgacgatggcctggacgaag-aatccgaacatggagaacatggcgaggcggccctt 1658 Query: 292 cttgatctccttcaccttgagc 313 ||||| |||||||||||||||| Sbjct: 1657 cttgagctccttcaccttgagc 1636
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 54.0 bits (27), Expect = 3e-04 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 729 caggttctggacggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 671 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||| ||||| || ||||||||||||||||||||||| Sbjct: 670 agaacgatgccaggcggccgttcttgatctccttcacctt 631
>gb|AY617096.1| Picea sitchensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 763 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| ||| |||||||||| |||||||||||| Sbjct: 685 aacatggccaaccgcccgttcttgagctccttcacctt 648
>dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene for light-harvesting chlorophyll a/b-binding protein 2, complete cds Length = 3125 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| || ||||||||||||||||||||||| Sbjct: 2891 aacatggccaatcgcccgttcttgatctccttcacctt 2854
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| ||| |||||||||| |||||||||||| Sbjct: 719 aacatggccaaccgcccgttcttgagctccttcacctt 682
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| ||| |||||||||| |||||||||||| Sbjct: 716 aacatggccaaccgcccgttcttgagctccttcacctt 679
>gb|AY554168.1| Nicotiana tabacum chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 600 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||||||||||||| Sbjct: 452 ccgttcttgatctccttcaccttgagc 426
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 232 ccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccgnccgtt 291 ||||||||| |||||||| |||| || || | |||||| |||||||| || || || || Sbjct: 1716 ccggtgacgatggcctggacgaag-aatccgaacatggagaacatggcgaggcggccctt 1658 Query: 292 cttgatctccttcaccttgagc 313 ||||| |||||||||||||||| Sbjct: 1657 cttgagctccttcaccttgagc 1636
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 54.0 bits (27), Expect = 3e-04 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 726 caggttctggacggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 668 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | |||||||||| ||||||||||||||||||||||| Sbjct: 667 agaacatggccaaggcgccgttcttgatctccttcacctt 628
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||||||||||||| Sbjct: 668 ccgttcttgatctccttcaccttgagc 642
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 674 aacatggccaggcggccgttcttgatctccttgacctt 637
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 54.0 bits (27), Expect = 3e-04 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 210 caggttntngaagggcccctcgccggtgacgtaggcctggatgaagnaagcccagcatgg 269 |||||| | || ||| |||| |||||| ||| |||||||| |||| ||||| | ||||| Sbjct: 1750 caggttctggacggggcccttgccggtcacgatggcctggacgaag-aagccgaacatgg 1692 Query: 270 ataacatggccagccgnccgttcttgatctccttcacctt 309 | ||| ||||| || ||||||||||||||||||||||| Sbjct: 1691 agaacgatgccaggcggccgttcttgatctccttcacctt 1652
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 54.0 bits (27), Expect = 3e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||||| || ||||||||||||||||||||||| Sbjct: 713 aacatggccaatcggccgttcttgatctccttcacctt 676
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| ||||| || ||||||||||||||||| ||||| Sbjct: 1215 catggagaacattgccaggcggccgttcttgatctccttaacctt 1171
>gb|AY267624.1| Bigelowiella natans chlorophyll a/b-binding protein II 2 mRNA, complete cds; nuclear gene for plastid product Length = 1147 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Minus Query: 257 aagcccagcatggataacatggccagccgnccgttcttgatctccttcacctt 309 ||||| |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 924 aagccgagcatggagaacatagcaagacggccgttcttgatctccttgacctt 872
>gb|DQ018376.1| Pinus krempfii chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 752 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 689 catggaaaacatggccaagcgcccgttcttgagctccttcacctt 645
>gb|AY617091.1| Pinus strobus chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgagctccttcacctt 648
>gb|AY617090.1| Pinus monticola chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgagctccttcacctt 648
>gb|AY617089.1| Pinus lambertiana chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgagctccttcacctt 648
>gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 692 catggaaaacatggccaagcgyccgttcttgagctccttcacctt 648
>gb|AY617087.1| Pinus chiapensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| || |||||||||| |||||||||||| Sbjct: 692 catggaaaacatggccaagcgcccgttcttgagctccttcacctt 648
>gb|AF398746.1|AF398746 Carlquistia muirii ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1100 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 960 catggagaacatggctagcctgccattcttgatctccttcacctt 916
>gb|AF398740.1|AF398740 Wilkesia gymnoxiphium ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 963 catggagaacatggctagcctgccattcttgatctccttcacctt 919
>emb|AJ538464.1|NTA538464 Nicotiana tabacum cDNA-AFLP-fragment BC2-M14-017 Length = 330 Score = 52.0 bits (26), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 251 catggagaacatggcaagtctgccgttcttgatctcctttaccttgagc 203
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| |||||||| |||||||| | |||||||||||| Sbjct: 581 catggagaacatcgccagccgcccgttctttagctccttcacctt 537
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| |||||||| | |||||||||||| Sbjct: 712 catggagaacatggccaaccgcccgttctttagctccttcacctt 668
>gb|K00973.1|PETCAB3 Petunia major chlorophyll a/b binding protein (Cab) clone pCab3, 3' end and flank Length = 511 Score = 52.0 bits (26), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || | || |||||||||||||||||||||||| Sbjct: 285 catggaaaacatggcaagtctaccattcttgatctccttcaccttgagc 237
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 52.0 bits (26), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || || || |||||||||||||| ||||||||| Sbjct: 670 catggagaacatggcgaggcggccattcttgatctccttaaccttgagc 622
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 52.0 bits (26), Expect = 0.001 Identities = 40/45 (88%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| |||||||||| ||| |||||||| | |||||||||||| Sbjct: 270 catggagaacatggccaaccgcccgttctttagctccttcacctt 226
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 52.0 bits (26), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || || || |||||||||||||| ||||||||| Sbjct: 875 catggagaacatggcgaggcggccattcttgatctccttaaccttgagc 827
>gb|M21397.1|TOBCABA Tobacco chlorophyll a/b-binding protein (Cab-C) gene, complete cds Length = 1240 Score = 52.0 bits (26), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcaccttgagc 313 |||||| |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 1114 catggagaacatggcaagtctgccgttcttgatctcctttaccttgagc 1066
>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence Length = 1196 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 162 gatgacggtgagcaggttgttgccgaaggggtc 194 |||||||||||||| ||||||||| |||||||| Sbjct: 907 gatgacggtgagcaagttgttgccaaaggggtc 875
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 601 catggccaggcggccgttcttgatctccttca 570
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 50.1 bits (25), Expect = 0.004 Identities = 33/36 (91%) Strand = Plus / Minus Query: 278 gccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| ||||||||||||||||| | ||||||| Sbjct: 521 gccagccgcccgttcttgatctccttgagcttgagc 486
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 652 catggccagacggccgttcttgatctccttca 621
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 596 catggccaggcgcccgttcttgatctccttca 565
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 278 gccagccgnccgttcttgatctccttcacctt 309 ||||| || ||||||||||||||||||||||| Sbjct: 85675 gccaggcgaccgttcttgatctccttcacctt 85644
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 1348 catggccaggcggccgttcttgatctccttca 1317
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 2318 catggccagacggccgttcttgatctccttca 2287
>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide Length = 2327 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 162 gatgacggtgagcaggttgttgccgaaggggtc 194 |||||||||||||| ||||||||| |||||||| Sbjct: 1939 gatgacggtgagcaagttgttgccaaaggggtc 1907
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctccttca 305 ||||||||| || ||||||||||||||||||| Sbjct: 550 catggccaggcggccgttcttgatctccttca 519
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 50.1 bits (25), Expect = 0.004 Identities = 33/36 (91%) Strand = Plus / Minus Query: 278 gccagccgnccgttcttgatctccttcaccttgagc 313 |||||||| ||||||||||||||||| | ||||||| Sbjct: 639 gccagccgcccgttcttgatctccttgagcttgagc 604
>dbj|AK066997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K09, full insert sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 278 gccagccgnccgttcttgatctccttcacctt 309 ||||| || ||||||||||||||||||||||| Sbjct: 847 gccaggcgaccgttcttgatctccttcacctt 816
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/88 (82%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 226 ccctcgccggtgacgtaggcctggatgaagnaagcccagcatggataacatggccagccg 285 |||| |||||||||| |||||||| |||| || || | |||||| ||||| || |||| Sbjct: 761 cccttgccggtgacgatggcctggacgaag-aatccgaacatggagaacatagctagcct 703 Query: 286 nccgttcttgatctccttcaccttgagc 313 || ||||||| |||||||||||||||| Sbjct: 702 tccattcttgagctccttcaccttgagc 675
>gb|DQ185425.1| Rosa roxburghii clone C40 defense-related mRNA, partial sequence Length = 304 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 220 ttcttgatctccttcaccttgagc 243
>gb|AY267623.1| Bigelowiella natans chlorophyll a/b-binding protein II 1 mRNA, complete cds; nuclear gene for plastid product Length = 1284 Score = 48.1 bits (24), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Minus Query: 263 agcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 924 agcatggagaacatagcgagacggccgttcttgatctccttaacctt 878
>gb|AF268321.1|AF268321 Chlorarachnion CCMP621 light-harvesting complex protein LHCG12 mRNA, complete cds Length = 1170 Score = 48.1 bits (24), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Minus Query: 263 agcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 922 agcatggagaacatagcgagacggccgttcttgatctccttaacctt 876
>gb|AF268320.1|AF268320 Chlorarachnion CCMP621 light-harvesting complex protein LHCG11 mRNA, complete cds Length = 1128 Score = 48.1 bits (24), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Minus Query: 263 agcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 879 agcatggagaacatagcgagacggccgttcttgatctccttaacctt 833
>gb|AF268319.1|AF268319 Chlorarachnion CCMP621 light-harvesting complex protein LHCG4 mRNA, complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.017 Identities = 41/47 (87%) Strand = Plus / Minus Query: 263 agcatggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 919 agcatggagaacatagcgagacggccgttcttgatctccttaacctt 873
>emb|X02356.1|PECAB91R Petunia gene for chlorophyll a/b binding protein cab 91R Length = 1173 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 883 ttcttgatctccttcaccttgagc 860
>emb|X02358.1|PECAB25 Petunia gene for chlorophyll a/b binding protein cab 25 Length = 1184 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 880 ttcttgatctccttcaccttgagc 857
>gb|K00976.1|PETCAB102 Petunia major chlorophyll a/b binding protein (Cab) clone pCab102, 3' end and flank Length = 302 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 38 ttcttgatctccttcaccttgagc 15
>gb|K00975.1|PETCAB10 Petunia major chlorophyll a/b binding protein (Cab) clone pCab10, 3' end and flank Length = 367 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 80 ttcttgatctccttcaccttgagc 57
>gb|K00974.1|PETCAB4 Petunia major chlorophyll a/b binding protein (Cab) clone pCab4, 3' end Length = 387 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 ttcttgatctccttcaccttgagc 313 |||||||||||||||||||||||| Sbjct: 245 ttcttgatctccttcaccttgagc 222
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding AT2G05070 (LHCB2.2) mRNA, complete cds Length = 1060 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 725 aacatggcaagacgaccgttcttgagctccttcacctt 688
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05060 transcript variant AT2G05060.2 mRNA, complete cds Length = 2130 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 1415 aacatggcaagacgaccgttcttgagctccttcacctt 1452
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 695 catggcgagccgcccgttcttgatctcctt 666
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 696 catggcgagccgcccgttcttgatctcctt 667
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 698 catggcgagccgcccgttcttgatctcctt 669
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 701 catggcgagccgcccgttcttgatctcctt 672
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 701 catggcgagccgcccgttcttgatctcctt 672
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 702 catggcgagccgcccgttcttgatctcctt 673
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 702 catggcgagccgcccgttcttgatctcctt 673
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 705 catggcgagccgcccgttcttgatctcctt 676
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 709 ccgttcttgatctccttcacctt 687
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 ||||| ||||||| || |||||||||||||||||||| Sbjct: 541 aacatagccagcctgccattcttgatctccttcacctt 504
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence Length = 958 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||| ||||||||| Sbjct: 694 ccgttcttgatctcctttaccttgagc 668
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 728 ccgttcttgatctccttcacctt 706
>gb|AY093372.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070) mRNA, complete cds Length = 881 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 665 aacatggcaagacgaccgttcttgagctccttcacctt 628
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 81138 aacatggcaagacgaccgttcttgagctccttcacctt 81175
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 695 ccgttcttgatctccttcacctt 673
>gb|AY066036.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 798 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 665 aacatggcaagacgaccgttcttgagctccttcacctt 628
>gb|AY062563.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070; F1O13.20) mRNA, complete cds Length = 958 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 725 aacatggcaagacgaccgttcttgagctccttcacctt 688
>gb|AY054218.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 929 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 723 aacatggcaagacgaccgttcttgagctccttcacctt 686
>emb|BX819347.1|CNS0A9RX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 706 aacatggcaagacgaccgttcttgagctccttcacctt 669
>emb|BX819270.1|CNS0A9RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 696 aacatggcaagacgaccgttcttgagctccttcacctt 659
>emb|BX820206.1|CNS0A9D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 714 aacatggcaagacgaccgttcttgagctccttcacctt 677
>emb|BX820202.1|CNS0A9FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 708 aacatggcaagacgaccgttcttgagctccttcacctt 671
>emb|BX819668.1|CNS0A9CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 713 aacatggcaagacgaccgttcttgagctccttcacctt 676
>emb|BX819509.1|CNS0A82Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 926 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 701 aacatggcaagacgaccgttcttgagctccttcacctt 664
>gb|AF134123.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.2) mRNA, complete cds Length = 943 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 715 aacatggcaagacgaccgttcttgagctccttcacctt 678
>gb|AF134122.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.1) mRNA, complete cds Length = 974 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || |||||||||| |||||||||||| Sbjct: 723 aacatggcaagacgaccgttcttgagctccttcacctt 686
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 60467 catggcgagccgcccgttcttgatctcctt 60438
>dbj|AB122116.1| Chlamydomonas reinhardtii LhcI-3 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1830 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 ||||||||| || ||||||||||||||||| Sbjct: 1271 catggccaggcggccgttcttgatctcctt 1242
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 716 catggcgagccgcccgttcttgatctcctt 687
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 |||||||| || || || |||||||||||||||||||| Sbjct: 704 aacatggcaagacggccattcttgatctccttcacctt 667
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 ||||||||| || ||||||||||||||||| Sbjct: 725 catggccaggcggccgttcttgatctcctt 696
>emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding protein of photosystem II Length = 518 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 227 ccgttcttgatctccttcacctt 205
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 702 catggcgagccgcccgttcttgatctcctt 673
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 702 catggcgagccgcccgttcttgatctcctt 673
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 732 catggcgagccgcccgttcttgatctcctt 703
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 698 catggcgagccgcccgttcttgatctcctt 669
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 701 catggcgagccgcccgttcttgatctcctt 672
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 695 catggcgagccgcccgttcttgatctcctt 666
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 696 catggcgagccgcccgttcttgatctcctt 667
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 992 catggcgagccgcccgttcttgatctcctt 963
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 705 catggcgagccgcccgttcttgatctcctt 676
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 |||||| ||||| ||||||||||||||||| Sbjct: 344 catggcgagccgcccgttcttgatctcctt 315
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 46.1 bits (23), Expect = 0.069 Identities = 28/30 (93%) Strand = Plus / Minus Query: 274 catggccagccgnccgttcttgatctcctt 303 ||||||||| || ||||||||||||||||| Sbjct: 692 catggccaggcggccgttcttgatctcctt 663
>dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590a, complete sequence Length = 16141 Score = 46.1 bits (23), Expect = 0.069 Identities = 37/42 (88%) Strand = Plus / Plus Query: 265 catggataacatggccagccgnccgttcttgatctccttcac 306 |||||| |||||||||| || || ||||||||||||||||| Sbjct: 11294 catggagaacatggccaaccttccattcttgatctccttcac 11335
>gb|U21113.1|STU21113 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-4) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||| ||||||||| Sbjct: 650 ccgttcttgatctcctttaccttgagc 624
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 |||||||||||||||||||| |||||| Sbjct: 203 ccgttcttgatctccttcactttgagc 177
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||| ||||||||| Sbjct: 203 ccgttcttgatctcctttaccttgagc 177
>gb|M30618.1|TOMCBPD2 Tomato chlorophyll a/b-binding protein Cab-1C gene, 3' end Length = 351 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||| ||||||||| Sbjct: 203 ccgttcttgatctcctttaccttgagc 177
>gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds Length = 1253 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 ||||||||||||||||| ||||||||| Sbjct: 840 ccgttcttgatctcctttaccttgagc 814
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 46.1 bits (23), Expect = 0.069 Identities = 34/38 (89%) Strand = Plus / Minus Query: 272 aacatggccagccgnccgttcttgatctccttcacctt 309 ||||| ||||| || ||||||||||||||||| ||||| Sbjct: 862 aacatagccaggcggccgttcttgatctccttgacctt 825
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgagc 313 |||||||||||||| |||||||||||| Sbjct: 844 ccgttcttgatctctttcaccttgagc 818
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcacctt 309 ||||||||||||||||||||||| Sbjct: 621 ccgttcttgatctccttcacctt 599
>gb|AY954738.1| Ostreococcus tauri chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5 gene, complete cds; nuclear gene for chloroplast product Length = 1445 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 287 ccgttcttgatctccttcaccttgag 312 ||||||||||||||||| |||||||| Sbjct: 1291 ccgttcttgatctccttaaccttgag 1266
>gb|AF517869.1| Griffithsia japonica isolate Gj446 light-harvest protein mRNA, partial cds Length = 758 Score = 44.1 bits (22), Expect = 0.27 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 acatggccagccgnccgttcttgatctcc 301 |||||||||| || ||||||||||||||| Sbjct: 520 acatggccaggcgtccgttcttgatctcc 492
>gb|AF398747.1|AF398747 Anisocarpus scabridus ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 963 catggagaacattgctagcctgccattcttgatctccttcacctt 919
>gb|AF398745.1|AF398745 Osmadenia tenella ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 963 catggagaacattgctagcctgccattcttgatctccttcacctt 919
>gb|AF398744.1|AF398744 Madia nutans ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 963 catggagaacattgctagcctgccattcttgatctccttcacctt 919
>gb|AF398743.1|AF398743 Deinandra lobbii ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 963 catggagaacattgctagcctgccattcttgatctccttcacctt 919
>gb|AF398741.1|AF398741 Wilkesia gymnoxiphium ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1083 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 943 catggagaacattgctagcctgccattcttgatctccttcacctt 899
>gb|AF398739.1|AF398739 Dubautia scabra ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1037 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 897 catggagaacattgctagcctgccattcttgatctccttcacctt 853
>gb|AF398738.1|AF398738 Dubautia plantaginea ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1102 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 962 catggagaacattgctagcctgccattcttgatctccttcacctt 918
>gb|AF398737.1|AF398737 Dubautia laxa ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1083 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 943 catggagaacattgctagcctgccattcttgatctccttcacctt 899
>gb|AF398736.1|AF398736 Dubautia latifolia ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1085 Score = 44.1 bits (22), Expect = 0.27 Identities = 39/45 (86%) Strand = Plus / Minus Query: 265 catggataacatggccagccgnccgttcttgatctccttcacctt 309 |||||| ||||| || |||| || |||||||||||||||||||| Sbjct: 945 catggagaacattgctagcctgccattcttgatctccttcacctt 901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,043,428 Number of Sequences: 3902068 Number of extensions: 2043428 Number of successful extensions: 40334 Number of sequences better than 10.0: 316 Number of HSP's better than 10.0 without gapping: 318 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39707 Number of HSP's gapped (non-prelim): 595 length of query: 322 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 300 effective length of database: 17,147,199,772 effective search space: 5144159931600 effective search space used: 5144159931600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)