ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8m19 |
|---|---|
| Clone Library Name | barley_pub |
>ATPBO_ARATH (Q9C5A9) ATP synthase beta chain 3, mitochondrial precursor (EC| 3.6.3.14) Length = 559 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DLSEQ+FYMVGGI+ V Sbjct: 525 LDGKYDDLSEQSFYMVGGIDEV 546
>ATPBN_ARATH (P83484) ATP synthase beta chain 2, mitochondrial precursor (EC| 3.6.3.14) Length = 556 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DLSEQ+FYMVGGI+ V Sbjct: 522 LDGKYDDLSEQSFYMVGGIDEV 543
>ATPBM_ARATH (P83483) ATP synthase beta chain 1, mitochondrial precursor (EC| 3.6.3.14) Length = 556 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DLSEQ+FYMVGGI+ V Sbjct: 522 LDGKYDDLSEQSFYMVGGIDEV 543
>ATPBM_NICPL (P17614) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 560 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DLSEQ+FYMVGGI+ V Sbjct: 526 LDGKYDDLSEQSFYMVGGIDEV 547
>ATPBM_ORYSA (Q01859) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 552 Score = 36.6 bits (83), Expect = 0.020 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL EQ+FYMVGGIE V Sbjct: 518 LDGKYDDLPEQSFYMVGGIEEV 539
>ATPBM_MAIZE (P19023) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 553 Score = 36.6 bits (83), Expect = 0.020 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL EQ+FYMVGGIE V Sbjct: 519 LDGKYDDLPEQSFYMVGGIEEV 540
>ATPBM_ACTCH (P43395) ATP synthase beta chain, mitochondrial (EC 3.6.3.14)| (PKIWI505) (Fragment) Length = 173 Score = 36.6 bits (83), Expect = 0.020 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL EQ+FYMVGGIE V Sbjct: 139 LDGKFDDLPEQSFYMVGGIEEV 160
>ATPBM_DAUCA (P37399) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 547 Score = 35.4 bits (80), Expect = 0.044 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL EQ+FYM+GGIE V Sbjct: 513 LDGKYDDLPEQSFYMLGGIEEV 534
>ATPBM_HEVBR (P29685) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 562 Score = 35.4 bits (80), Expect = 0.044 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL EQ+FYMVGGI+ V Sbjct: 528 LDGKYDDLPEQSFYMVGGIDEV 549
>ATPB_KLULA (P49376) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 505 Score = 33.1 bits (74), Expect = 0.22 Identities = 16/22 (72%), Positives = 16/22 (72%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK L E AFYMVGGIE V Sbjct: 472 LDGKYDHLPENAFYMVGGIEDV 493
>ATPB_YEAST (P00830) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 511 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 L+GK ++ E AFYMVGGIE V Sbjct: 478 LEGKYDNIPEHAFYMVGGIEDV 499
>ATPBM_CHLRE (P38482) ATP synthase beta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 574 Score = 31.6 bits (70), Expect = 0.63 Identities = 15/22 (68%), Positives = 15/22 (68%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 L GK DL E AFYMVGGI V Sbjct: 474 LQGKYDDLPEMAFYMVGGIHEV 495
>ATPB_SYNP1 (Q05373) ATP synthase beta chain (EC 3.6.3.14)| Length = 482 Score = 30.4 bits (67), Expect = 1.4 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L G+ DL EQAFYMVG IE Sbjct: 452 LSGELDDLPEQAFYMVGNIE 471
>ATPB_BUCAI (P57124) ATP synthase beta chain (EC 3.6.3.14)| Length = 465 Score = 30.4 bits (67), Expect = 1.4 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 + G+ DL EQAFYMVG IE V Sbjct: 437 IKGEFDDLPEQAFYMVGSIEEV 458
>ATPB_WOLSU (P42470) ATP synthase beta chain (EC 3.6.3.14)| Length = 467 Score = 30.0 bits (66), Expect = 1.8 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 L+GK + E AFYMVGGI+ V Sbjct: 435 LEGKYDQIPENAFYMVGGIDEV 456
>ATPB_PECFR (Q03235) ATP synthase beta chain (EC 3.6.3.14)| Length = 470 Score = 29.6 bits (65), Expect = 2.4 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L+GK DL E AFYMVG I+ Sbjct: 438 LEGKYDDLPESAFYMVGSID 457
>ATPB_HAEIN (P43715) ATP synthase beta chain (EC 3.6.3.14)| Length = 457 Score = 29.3 bits (64), Expect = 3.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDG+ + EQAFYMVG I+ V Sbjct: 429 LDGEYDHIPEQAFYMVGSIDEV 450
>ATPB_MYCPN (Q50331) ATP synthase beta chain (EC 3.6.3.14)| Length = 475 Score = 28.9 bits (63), Expect = 4.1 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 LDGK DL EQAF+ VG I+ Sbjct: 439 LDGKHDDLPEQAFFFVGTIQ 458
>ATPB_GALSU (Q08807) ATP synthase beta chain (EC 3.6.3.14)| Length = 476 Score = 28.5 bits (62), Expect = 5.3 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L+G+ DL EQAFY+VG I+ Sbjct: 445 LNGELDDLPEQAFYLVGNIQ 464
>ATPB_THEMA (O50550) ATP synthase beta chain (EC 3.6.3.14)| Length = 468 Score = 28.5 bits (62), Expect = 5.3 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK D+ EQAF M G I+ V Sbjct: 438 LDGKLDDVPEQAFLMAGNIDEV 459
>ATPB_BACFI (P25075) ATP synthase beta chain (EC 3.6.3.14)| Length = 467 Score = 28.1 bits (61), Expect = 7.0 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL E AF +VG IE V Sbjct: 438 LDGKYDDLPEDAFRLVGRIEEV 459
>ATPB_BACPF (P22478) ATP synthase beta chain (EC 3.6.3.14)| Length = 470 Score = 28.1 bits (61), Expect = 7.0 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 LDGK DL E AF +VG IE V Sbjct: 441 LDGKYDDLPEDAFRLVGRIEEV 462
>ATPB_SYNY3 (P26527) ATP synthase beta chain (EC 3.6.3.14)| Length = 483 Score = 28.1 bits (61), Expect = 7.0 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L G+ DL EQAFY+VG IE Sbjct: 452 LAGELDDLPEQAFYLVGDIE 471
>ATPB_SYNP6 (P07890) ATP synthase beta chain (EC 3.6.3.14)| Length = 484 Score = 28.1 bits (61), Expect = 7.0 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L+G+ DL EQAFY+VG I+ Sbjct: 452 LNGELDDLPEQAFYLVGDIQ 471
>ATPB_BUCAP (Q07232) ATP synthase beta chain (EC 3.6.3.14)| Length = 466 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIEXV 83 + G+ +L EQAFYMVG IE V Sbjct: 438 IGGEFDNLPEQAFYMVGTIEEV 459
>ATPB_SHIFL (P0ABB7) ATP synthase beta chain (EC 3.6.3.14)| Length = 459 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 ++G+ L EQAFYMVG IE Sbjct: 431 MEGEYDHLPEQAFYMVGSIE 450
>ATPB_PRODI (P50003) ATP synthase beta chain (EC 3.6.3.14)| Length = 483 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 L G+ DL EQAFY+VG I+ Sbjct: 452 LSGELDDLPEQAFYLVGDIQ 471
>ATPB_ECOLI (P0ABB4) ATP synthase beta chain (EC 3.6.3.14)| Length = 459 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 ++G+ L EQAFYMVG IE Sbjct: 431 MEGEYDHLPEQAFYMVGSIE 450
>ATPB_ECOL6 (P0ABB5) ATP synthase beta chain (EC 3.6.3.14)| Length = 459 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 ++G+ L EQAFYMVG IE Sbjct: 431 MEGEYDHLPEQAFYMVGSIE 450
>ATPB_ECO57 (P0ABB6) ATP synthase beta chain (EC 3.6.3.14)| Length = 459 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 148 LDGKXYDLSEQAFYMVGGIE 89 ++G+ L EQAFYMVG IE Sbjct: 431 MEGEYDHLPEQAFYMVGSIE 450 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,876,620 Number of Sequences: 219361 Number of extensions: 124738 Number of successful extensions: 404 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 404 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 404 length of database: 80,573,946 effective HSP length: 24 effective length of database: 75,309,282 effective search space used: 1807422768 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
