ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags9m17 | 657 | AV920216 | not_full | emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 | 53 | not_full | NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin) Length = 522 | 9 | -- | --- | - | -- | --- | - |
| rbags9m14 | 569 | AV920215 | not_full | dbj|AK104806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E03, full insert sequence Length = 1037 | 500 | not_full | RL2_LYCES (P29766) 60S ribosomal protein L2 (L8) (Ribosomal protein TL2) Length = 260 | 253 | -- | --- | - | -- | --- | - |
| rbags9m13 | 583 | AV920214 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 57 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 27 | -- | --- | - | -- | --- | - |
| rbags9m08 | 699 | AV920213 | not_full | gb|AF475122.1| Triticum aestivum ribosomal protein mRNA, partial cds Length = 366 | 500 | not_full | RL11_MEDSA (P46287) 60S ribosomal protein L11 (L5) Length = 181 | 214 | -- | --- | - | -- | --- | - |
| rbags9m07 | 671 | AV920212 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 73 | not_full | SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose permease 4) (Sucrose-proton symporter 4) (Sucrose transporter 4) Length = 510 | 7 | -- | --- | - | -- | --- | - |
| rbags9m05 | 675 | AV920211 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 28 | not_full | GSTF3_ARATH (P42761) Glutathione S-transferase ERD13 (EC 2.5.1.18) (GST class-phi) Length = 214 | 68 | -- | --- | - | -- | --- | - |
| rbags9m03 | 667 | AV920210 | not_full | dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H04, full insert sequence Length = 2175 | 54 | not_full | SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF Length = 1097 | 19 | -- | --- | - | -- | --- | - |
| rbags9m02 | 367 | AV920209 | not_full | ref|XM_480292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2507 | 37 | not_full | CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3) Length = 768 | 58 | -- | --- | - | -- | --- | - |
| rbags9m01 | 43 | AV834290 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9l24 | 610 | AV920208 | not_full | emb|AL031656.10|HS232N11 Human DNA sequence from clone RP1-232N11 on chromosome 20q12-13.2 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T and a novel gene, complete sequence Length = 111641 | 60 | not_full | YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic region Length = 518 | 4 | -- | --- | - | -- | --- | - |
| rbags9l23 | 691 | AV920207 | not_full | dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115A04, full insert sequence Length = 1679 | 47 | not_full | CN130_HUMAN (Q8N806) Protein C14orf130 Length = 425 | 4 | -- | --- | - | -- | --- | - |
| rbags9l21 | 771 | AV920206 | not_full | ref|XM_477178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1326 | 19 | not_full | COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2) (180 kDa bullous pemphigoid antigen 2) Length = 1497 | 7 | -- | --- | - | -- | --- | - |
| rbags9l20 | 653 | AV920205 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 260 | not_full | RK14_WHEAT (Q95H51) Chloroplast 50S ribosomal protein L14 Length = 123 | 363 | -- | --- | - | -- | --- | - |
| rbags9l17 | 632 | AV920204 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 44 | not_full | JHD2B_HUMAN (Q7LBC6) JmjC domain-containing histone demethylation protein 2B (EC 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA) Length = 1761 | 6 | -- | --- | - | -- | --- | - |
| rbags9l16 | 691 | AV920203 | not_full | gb|BT009447.1| Triticum aestivum clone wlmk8.pk0015.h6:fis, full insert mRNA sequence Length = 1206 | 40 | not_full | PUR9_BACSU (P12048) Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] Length = 51 | 109 | -- | --- | - | -- | --- | - |
| rbags9l15 | 699 | AV920202 | not_full | gb|BT016848.1| Zea mays clone Contig681 mRNA sequence Length = 855 | 111 | not_full | IVD_ARATH (Q9SWG0) Isovaleryl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.10) (IVD) Length = 409 | 72 | -- | --- | - | -- | --- | - |
| rbags9l14 | 664 | AV920201 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 198 | not_full | SCP1_BRALA (P04569) Sarcoplasmic calcium-binding proteins I, III, and IV (SCP I, III, IV) Length = 185 | 4 | -- | --- | - | -- | --- | - |
| rbags9l13 | 648 | AV834289 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 41 | not_full | SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-) Length = 1287 | 28 | -- | --- | - | -- | --- | - |
| rbags9l05 | 662 | AV920200 | not_full | ref|NM_188621.1| Oryza sativa (japonica cultivar-group), Ozsa8224 predicted mRNA Length = 603 | 433 | not_full | RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) Length = 119 | 3 | -- | --- | - | -- | --- | - |
| rbags9l03 | 654 | AV920199 | not_full | gb|AY036609.1| Triticum aestivum serine/threonine protein kinase mRNA, complete cds Length = 1805 | 162 | not_full | HT1_ARATH (Q2MHE4) Serine/threonine-protein kinase HT1 (EC 2.7.11.1) (High leaf temperature protein 1) Length = 390 | 500 | -- | --- | - | -- | --- | - |
| rbags9l02 | 679 | AV920198 | not_full | gb|AY111846.1| Zea mays CL50620_1 mRNA sequence Length = 583 | 40 | not_full | HEMA_IADU3 (P03442) Hemagglutinin precursor [Contains: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain] Length = 566 | 89 | -- | --- | - | -- | --- | - |
| rbags9l01 | 530 | AV920197 | not_full | gb|AY104578.1| Zea mays PCO113042 mRNA sequence Length = 943 | 186 | not_full | NDK1_ORYSA (Q07661) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) Length = 149 | 294 | -- | --- | - | -- | --- | - |
| rbags9k24 | 686 | AV920196 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 451 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| rbags9k23 | 700 | AV834288 | not_full | ref|XM_550352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2039 | 86 | not_full | PDI1_SCHPO (Q10057) Putative protein disulfide-isomerase C1F5.02 precursor (EC 5.3.4.1) Length = 492 | 142 | -- | --- | - | -- | --- | - |
| rbags9k22 | 705 | AV920195 | not_full | dbj|AB118018.1| Oryza sativa (japonica cultivar-group) bip132 mRNA for BRI1-KD interacting protein 132, partial cds Length = 1131 | 76 | not_full | NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 699 | 17 | -- | --- | - | -- | --- | - |
| rbags9k21 | 639 | AV920194 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 500 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 108 | -- | --- | - | -- | --- | - |
| rbags9k18 | 713 | AV920193 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 27 | not_full | DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300 Length = 832 | 93 | -- | --- | - | -- | --- | - |
| rbags9k17 | 628 | AV920192 | not_full | emb|AJ132399.1|HVU132399 Hordeum vulgare mRNA for alpha-tubulin 3 Length = 1692 | 500 | not_full | TBA3_HORVU (Q9ZRR5) Tubulin alpha-3 chain Length = 451 | 376 | -- | --- | - | -- | --- | - |
| rbags9k16 | 645 | AV920191 | not_full | gb|AY525328.1| Oryza sativa (japonica cultivar-group) putative histone H3 mRNA, complete cds.~~ Length = 839 | 500 | not_full | H3_PINPS (Q711T2) Histone H3 Length = 135 | 155 | -- | --- | - | -- | --- | - |
| rbags9k15 | 699 | AV920190 | not_full | ref|XM_725691.1| Plasmodium yoelii yoelii str. 17XNL protein serine/threonine kinase-1 (PY02853) partial mRNA Length = 1527 | 500 | not_full | BP73_ORYSA (Q8L4E7) SAP-like protein BP-73 (OsBP-73) (Riaa1) Length = 375 | 28 | -- | --- | - | -- | --- | - |
| rbags9k13 | 719 | AV920189 | not_full | gb|AY112602.1| Zea mays CL6289_1 mRNA sequence Length = 1769 | 49 | not_full | AGT21_ARATH (Q940M2) Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial precursor (EC 2.6.1.44) (Beta-alanine-pyruvate aminotransferase 1) Length = 476 | 284 | -- | --- | - | -- | --- | - |
| rbags9k10 | 730 | AV834287 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 23 | not_full | SUVH6_ARATH (Q8VZ17) Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 6) (H3-K9-HMTase 6) (Suppressor of variegation 3-9 homolog protein 6) (Su(var)3-9 homolog protein 6) (Protein SET DOMAIN GR | 85 | -- | --- | - | -- | --- | - |
| rbags9k09 | 667 | AV920188 | not_full | ref|XM_506873.1| PREDICTED Oryza sativa (japonica cultivar-group), B1215B07.34 mRNA Length = 1334 | 152 | not_full | ADK1_ARATH (Q9SF85) Adenosine kinase 1 (EC 2.7.1.20) (AK 1) (Adenosine 5NULL-phosphotransferase 1) Length = 344 | 71 | -- | --- | - | -- | --- | - |
| rbags9k08 | 705 | AV920187 | not_full | gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds Length = 983 | 54 | not_full | COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 | 46 | -- | --- | - | -- | --- | - |
| rbags9k07 | 621 | AV920186 | not_full | gb|AY123416.1| Triticum aestivum putative cytochrome c oxidase subunit mRNA, complete cds Length = 689 | 113 | not_full | COX12_SCHPO (O94581) Cytochrome c oxidase polypeptide VIb (EC 1.9.3.1) Length = 83 | 19 | -- | --- | - | -- | --- | - |
| rbags9k06 | 619 | AV920185 | not_full | ref|XM_475365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| rbags9k05 | 62 | AV834286 | not_full | gb|AY772669.1| Elymus sibiricus ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, complete cds; chloroplast Length = 1510 | 500 | not_full | RBL_SACOF (Q6ENV5) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 476 | 456 | -- | --- | - | -- | --- | - |
| rbags9k04 | 714 | AV834285 | not_full | emb|X52765.1|CHHVTRNK Barley plastid DNA with trnK(UUU), rps16, trnQ(UUG), psbK, psbI and trnS(GCU) genes Length = 6245 | 436 | not_full | RR16_HORVU (P25875) Chloroplast 30S ribosomal protein S16 Length = 85 | 77 | -- | --- | - | -- | --- | - |
| rbags9k03 | 142 | AV920184 | not_full | gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 | 9 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9k02 | 721 | AV920183 | not_full | gb|BT018755.1| Zea mays clone EL01N0523E09.d mRNA sequence Length = 2199 | 61 | not_full | LRC29_HUMAN (Q8WV35) Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9) Length = 223 | 14 | -- | --- | - | -- | --- | - |
| rbags9k01 | 678 | AV920182 | not_full | gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA sequence Length = 936 | 40 | not_full | YFGH_ECOLI (P65290) Hypothetical lipoprotein yfgH precursor Length = 172 | 8 | -- | --- | - | -- | --- | - |
| rbags9j23 | 690 | AV920181 | not_full | ref|NM_184331.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1043 | 312 | not_full | YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor Length = 250 | 6 | -- | --- | - | -- | --- | - |
| rbags9j22 | 738 | AV920180 | not_full | gb|AY104452.1| Zea mays PCO122208 mRNA sequence Length = 921 | 34 | not_full | NDUAC_ARATH (Q9M9M9) Probable NADH-ubiquinone oxidoreductase subunit B17.2 (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-B17.2) (CI-B17.2) Length = 159 | 15 | -- | --- | - | -- | --- | - |
| rbags9j19 | 690 | AV920179 | not_full | ref|XM_493881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 | 95 | not_full | Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor Length = 325 | 9 | -- | --- | - | -- | --- | - |
| rbags9j17 | 605 | AV920178 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 137 | -- | --- | - | -- | --- | - |
| rbags9j12 | 241 | AV920177 | not_full | dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 | 1 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9j10 | 696 | AV920176 | not_full | ref|XM_465531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1103 | 64 | not_full | CHAC_ECOLI (P39163) Cation transport protein chaC Length = 231 | 6 | -- | --- | - | -- | --- | - |
| rbags9j09 | 637 | AV920175 | not_full | ref|XM_478301.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1267 | 64 | not_full | YAJ6_SCHPO (Q09906) Hypothetical UPF0206 protein C30D11.06c in chromosome I Length = 426 | 35 | -- | --- | - | -- | --- | - |
| rbags9j08 | 637 | AV920174 | not_full | dbj|AK061891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G03, full insert sequence Length = 1304 | 57 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9j07 | 705 | AV834284 | not_full | gb|AC012459.7| Homo sapiens BAC clone RP11-527G2 from 2, complete sequence Length = 175554 | 127 | not_full | T2M4_METJA (Q58723) Type II restriction enzyme MjaIV (EC 3.1.21.4) (Endonuclease MjaIV) (R.MjaIV) Length = 245 | 4 | -- | --- | - | -- | --- | - |
