ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550352.1| Oryza sativa (japonica cultivar-group), mRNA 295 1e-76
2dbj|AK073970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 1e-76
3gb|BT009129.1| Triticum aestivum clone wl1n.pk0027.f4:fis, full ... 274 4e-70
4gb|AY739295.1| Zea mays protein disulfide isomerase (PDIL1-5) mR... 274 4e-70
5gb|BT016852.1| Zea mays clone Contig685 mRNA sequence 258 2e-65
6gb|AY111927.1| Zea mays CL33641_1 mRNA sequence 220 5e-54
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
8dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
9gb|BT013511.1| Lycopersicon esculentum clone 132204F, mRNA sequence 58 4e-05
10ref|XM_550139.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.010
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
12dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
13dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
14emb|AL162399.12| Human DNA sequence from clone RP11-545I10 on ch... 44 0.61
15ref|XM_639743.1| Dictyostelium discoideum hypothetical protein (... 42 2.4
16ref|XM_639323.1| Dictyostelium discoideum hypothetical protein (... 42 2.4
17gb|BC073554.1| Xenopus laevis MGC82837 protein, mRNA (cDNA clone... 42 2.4
18gb|AC115684.2| Dictyostelium discoideum chromosome 2 map 3108975... 42 2.4
19emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037... 42 2.4
20emb|AL133174.15| Human DNA sequence from clone RP3-470L14 on chr... 42 2.4
21emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3 42 2.4
22emb|CR859395.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1929 (from cl... 42 2.4
23ref|NM_001316.2| Homo sapiens CSE1 chromosome segregation 1-like... 42 2.4
24emb|BX469926.18| Zebrafish DNA sequence from clone DKEY-229E3 in... 42 2.4
25gb|AF053651.1|HSCSE1G9 Homo sapiens cellular apoptosis susceptib... 42 2.4
26gb|AF053642.1|AF053642 Homo sapiens liver cellular apoptosis sus... 42 2.4
27gb|AF053641.1|AF053641 Homo sapiens brain cellular apoptosis sus... 42 2.4
28gb|BC087550.1| Xenopus laevis cDNA clone IMAGE:5506254 40 9.6
29gb|BC085199.1| Xenopus laevis cDNA clone IMAGE:4057028 40 9.6
30gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7... 40 9.6
31gb|BC078076.1| Xenopus laevis holocytochrome c synthase (cytochr... 40 9.6
32gb|BC077388.1| Xenopus laevis cleavage and polyadenylation speci... 40 9.6
33gb|BC079816.1| Xenopus laevis MGC86474 protein, mRNA (cDNA clone... 40 9.6
34gb|BC081003.1| Xenopus laevis MGC81274 protein, mRNA (cDNA clone... 40 9.6
35gb|BC080063.1| Xenopus laevis MGC84042 protein, mRNA (cDNA clone... 40 9.6
36gb|BC079697.1| Xenopus laevis MGC80854 protein, mRNA (cDNA clone... 40 9.6
37gb|BC073100.1| Xenopus laevis MGC83562 protein, mRNA (cDNA clone... 40 9.6
38gb|BC072971.1| Xenopus laevis MGC82519 protein, mRNA (cDNA clone... 40 9.6
39gb|BC078036.1| Xenopus laevis cDNA clone MGC:82763 IMAGE:5156829... 40 9.6
40gb|BC070641.1| Xenopus laevis hypothetical protein MGC81501, mRN... 40 9.6
41gb|BC070612.1| Xenopus laevis hypothetical protein MGC81341, mRN... 40 9.6
42gb|BC068820.1| Xenopus laevis hypothetical protein MGC81434, mRN... 40 9.6
43gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome... 40 9.6
44gb|AC161572.4| Mus musculus chromosome 15, clone RP23-358J10, co... 40 9.6
45gb|AY915719.1| Schistosoma japonicum SJCHGC08932 protein mRNA, p... 40 9.6
46gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, comp... 40 9.6
47gb|AC150774.2| Xenopus tropicalis clone CH216-82E5, complete seq... 40 9.6
48gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, com... 40 9.6
49gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome... 40 9.6
50gb|AC115039.7| Mus musculus chromosome 6, clone RP24-279C2, comp... 40 9.6
51gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosom... 40 9.6
52gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 9.6
53gb|AC125094.5| Mus musculus BAC clone RP24-176L12 from chromosom... 40 9.6
54gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, compl... 40 9.6
55gb|AC002486.1| Homo sapiens BAC clone CTA-367O17 from 7, complet... 40 9.6
56gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete se... 40 9.6
57emb|AL358858.19| Human DNA sequence from clone RP11-239I22 on ch... 40 9.6
58emb|AL139322.13| Human DNA sequence from clone RP11-196P14 on ch... 40 9.6
59gb|AF212160.2| Xenopus laevis myogenic regulatory protein myf-5 ... 40 9.6
60gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome... 40 9.6
61emb|AJ850135.1| Xenopus laevis foxD5a gene for Fox protein 40 9.6
62emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in... 40 9.6
63emb|BX663615.15| Zebrafish DNA sequence from clone DKEY-14B2 in ... 40 9.6
64emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 ... 40 9.6
65dbj|AB219931.1| Xenopus laevis Xnr5-a, Xnr5-b, Xnr5-c genes, par... 40 9.6
66gb|DQ378291.1| Drosophila virilis strain Tucson 15010-1001.10 ch... 40 9.6
67gb|AC079269.8| Homo sapiens chromosome 10 clone RP11-379L21, com... 40 9.6
68gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, com... 40 9.6
69gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, co... 40 9.6
70gb|BC082858.1| Xenopus laevis protein phospatase 3 regulatory su... 40 9.6
71gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, comp... 40 9.6
72gb|BC090056.1| Xenopus laevis cDNA clone MGC:69062 IMAGE:4965751... 40 9.6
73gb|AF283102.1|AF283102 Xenopus laevis Nkx2-5 (Nkx2-5) gene, prom... 40 9.6
74gb|BC044274.1| Xenopus laevis, clone IMAGE:5542776, mRNA 40 9.6
75gb|BC042357.1| Xenopus laevis MGC82035 protein, mRNA (cDNA clone... 40 9.6
76emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on ch... 40 9.6
77emb|AL928887.13| Zebrafish DNA sequence from clone CH211-136O14 ... 40 9.6
78emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-1... 40 9.6
79gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region ... 40 9.6
80emb|AL160211.2|CNS01RGV Human chromosome 14 DNA sequence BAC R-1... 40 9.6
81emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in... 40 9.6
82gb|AC151323.2| Xenopus tropicalis clone ISB-253E6, complete sequ... 40 9.6
83gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, compl... 40 9.6
84gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complet... 40 9.6
85emb|AL133239.4|CNS01DUC Human chromosome 14 DNA sequence BAC R-7... 40 9.6
86emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chr... 40 9.6 
>ref|XM_550352.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2039

 Score =  295 bits (149), Expect = 1e-76
 Identities = 304/356 (85%), Gaps = 6/356 (1%)
 Strand = Plus / Minus

                                                                        
Query: 348  tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
            |||||||||||||||| |||| | |||||||| |||||  || |||||||||||||||||
Sbjct: 1655 tgcagcttctccttgacgaattttgccatgtccttcagatttgatttctttgaaagtttt 1596

                                                                        
Query: 408  atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
            ||||||||| | |||||||  |||||||| ||||| ||||| ||||| ||||||| ||||
Sbjct: 1595 atcgggttgcttttgtcttgggcaggatatagcaacagtgtagggtagttgtttatctgc 1536

                                                                        
Query: 468  aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagatta------tcc 521
            ||||| |||||||||||||| |||||||| || ||||||||||||||||||       ||
Sbjct: 1535 aatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagattagtctggccc 1476

                                                                        
Query: 522  aaaccactgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaaca 581
            ||| || ||||||| |||||||||||||| | ||||||||| ||||| ||||||||||||
Sbjct: 1475 aaatcattgaaatgtttggccaacttctccacgtttttacttatggcctcacagtcaaca 1416

                                                                        
Query: 582  caccaaggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatcc 641
            ||||||||||||| | |||| ||||  ||||| ||||| ||||  |  || |||||||| 
Sbjct: 1415 caccaaggtgcatgaacctcaaggaacacattttgaggactttctagaactgaagaatca 1356

                                                                    
Query: 642  aatgtacgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
            |||||||| ||||||||||||||||   |||||||||||| |||||||||||||||
Sbjct: 1355 aatgtacggccaacaaccttttcaataggtcccttttcttctggtactggttctga 1300



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 254  aatccactatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagt 313
            |||| |||||||||||||||||||| ||||| |||| |||||||||||||| || | | |
Sbjct: 1716 aatctactatagctcatccttgacaatgtcaccagcggctactgtttcgacatccgcaat 1657

                             
Query: 314  ttggagcttctccttga 330
            ||| |||||||||||||
Sbjct: 1656 ttgcagcttctccttga 1640
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>dbj|AK073970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P17, full
            insert sequence
          Length = 2039

 Score =  295 bits (149), Expect = 1e-76
 Identities = 304/356 (85%), Gaps = 6/356 (1%)
 Strand = Plus / Minus

                                                                        
Query: 348  tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
            |||||||||||||||| |||| | |||||||| |||||  || |||||||||||||||||
Sbjct: 1655 tgcagcttctccttgacgaattttgccatgtccttcagatttgatttctttgaaagtttt 1596

                                                                        
Query: 408  atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
            ||||||||| | |||||||  |||||||| ||||| ||||| ||||| ||||||| ||||
Sbjct: 1595 atcgggttgcttttgtcttgggcaggatatagcaacagtgtagggtagttgtttatctgc 1536

                                                                        
Query: 468  aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagatta------tcc 521
            ||||| |||||||||||||| |||||||| || ||||||||||||||||||       ||
Sbjct: 1535 aatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagattagtctggccc 1476

                                                                        
Query: 522  aaaccactgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaaca 581
            ||| || ||||||| |||||||||||||| | ||||||||| ||||| ||||||||||||
Sbjct: 1475 aaatcattgaaatgtttggccaacttctccacgtttttacttatggcctcacagtcaaca 1416

                                                                        
Query: 582  caccaaggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatcc 641
            ||||||||||||| | |||| ||||  ||||| ||||| ||||  |  || |||||||| 
Sbjct: 1415 caccaaggtgcatgaacctcaaggaacacattttgaggactttctagaactgaagaatca 1356

                                                                    
Query: 642  aatgtacgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
            |||||||| ||||||||||||||||   |||||||||||| |||||||||||||||
Sbjct: 1355 aatgtacggccaacaaccttttcaataggtcccttttcttctggtactggttctga 1300



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 254  aatccactatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagt 313
            |||| |||||||||||||||||||| ||||| |||| |||||||||||||| || | | |
Sbjct: 1716 aatctactatagctcatccttgacaatgtcaccagcggctactgtttcgacatccgcaat 1657

                             
Query: 314  ttggagcttctccttga 330
            ||| |||||||||||||
Sbjct: 1656 ttgcagcttctccttga 1640
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>gb|BT009129.1| Triticum aestivum clone wl1n.pk0027.f4:fis, full insert mRNA sequence
          Length = 2565

 Score =  274 bits (138), Expect = 4e-70
 Identities = 297/350 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
            ||||||||||||||||| | | | |||||||| || |  ||  ||||||||||||| || 
Sbjct: 1301 tgcagcttctccttgatcagtttggccatgtccttgacactcgatttctttgaaagcttg 1242

                                                                        
Query: 408  atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
            ||||||||| | |||||||||||| ||||||| || || || |||||||| || |||| |
Sbjct: 1241 atcgggttgtttttgtcttcagcaagataaaggaatagcgtcgggtaattattcaccttc 1182

                                                                        
Query: 468  aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagattatccaaacca 527
            ||||| |||||||||||||| |||||||| || ||||||||||||||||| ||| |||||
Sbjct: 1181 aatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagattgtccgaacca 1122

                                                                        
Query: 528  ctgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaacacaccaa 587
            ||||||||||| |||||||||||||  |||||||| || |||||||||||||||||||||
Sbjct: 1121 ctgaaatgcttcgccaacttctcaacatttttacttatcgcttcacagtcaacacaccaa 1062

                                                                        
Query: 588  ggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatccaatgta 647
            |||| || | |||| |||| ||| || ||| | |||| ||  ||||||||||| ||||||
Sbjct: 1061 ggtgtatgaacctcaaggaagacgttttgatgactttccagcacagaagaatcaaatgta 1002

                                                              
Query: 648  cgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
            || ||||||||||||||||  |||||||| ||||| || | |||||||||
Sbjct: 1001 cgaccaacaaccttttcaataagtcccttctcttgaggcaatggttctga 952



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 261  tatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagtttggagc 320
            ||||||||||||||||| |||||||  || |||||||| || ||||| ||  |||| |||
Sbjct: 1355 tatagctcatccttgacgttgtcaggggccgctactgtctccacgtctggtatttgcagc 1296

                       
Query: 321  ttctccttgat 331
            |||||||||||
Sbjct: 1295 ttctccttgat 1285
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>gb|AY739295.1| Zea mays protein disulfide isomerase (PDIL1-5) mRNA, complete cds
          Length = 1983

 Score =  274 bits (138), Expect = 4e-70
 Identities = 297/350 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
            ||||||||||||||||| | | | |||||||| || |  ||  ||||||||||||| || 
Sbjct: 1715 tgcagcttctccttgatcagtttggccatgtccttgacactcgatttctttgaaagcttg 1656

                                                                        
Query: 408  atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
            ||||||||| | |||||||||||| ||||||| || || || |||||||| || |||| |
Sbjct: 1655 atcgggttgtttttgtcttcagcaagataaaggaatagcgtcgggtaattattcaccttc 1596

                                                                        
Query: 468  aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagattatccaaacca 527
            ||||| |||||||||||||| |||||||| || ||||||||||||||||| ||| |||||
Sbjct: 1595 aatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagattgtccgaacca 1536

                                                                        
Query: 528  ctgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaacacaccaa 587
            ||||||||||| |||||||||||||  |||||||| || |||||||||||||||||||||
Sbjct: 1535 ctgaaatgcttcgccaacttctcaacatttttacttatcgcttcacagtcaacacaccaa 1476

                                                                        
Query: 588  ggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatccaatgta 647
            |||| || | |||| |||| ||| || ||| | |||| ||  ||||||||||| ||||||
Sbjct: 1475 ggtgtatgaacctcaaggaagacgttttgatgactttccagcacagaagaatcaaatgta 1416

                                                              
Query: 648  cgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
            || ||||||||||||||||  |||||||| ||||| || | |||||||||
Sbjct: 1415 cgaccaacaaccttttcaataagtcccttctcttgaggcaatggttctga 1366



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 261  tatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagtttggagc 320
            ||||||||||||||||| |||||||  || |||||||| || ||||| ||  |||| |||
Sbjct: 1769 tatagctcatccttgacgttgtcaggggccgctactgtctccacgtctggtatttgcagc 1710

                       
Query: 321  ttctccttgat 331
            |||||||||||
Sbjct: 1709 ttctccttgat 1699
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>gb|BT016852.1| Zea mays clone Contig685 mRNA sequence
          Length = 1812

 Score =  258 bits (130), Expect = 2e-65
 Identities = 295/350 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
            ||||||||||||||||| | | | |||||||| || |  ||  ||||||||||||| || 
Sbjct: 1312 tgcagcttctccttgatcagtttggccatgtccttgacactcgatttctttgaaagcttg 1253

                                                                        
Query: 408  atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
            ||||||||| | |||||||||||| ||||||| || || || |||||||| || |||| |
Sbjct: 1252 atcgggttgtttttgtcttcagcaagataaaggaatagcgtcgggtaattattcaccttc 1193

                                                                        
Query: 468  aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagattatccaaacca 527
            ||||| |||||||||||||| |||||||| || || |||||||||||||| ||| |||||
Sbjct: 1192 aatttgggatgttcattcacagaagcatctatgcgcgcaaatttaagattgtccgaacca 1133

                                                                        
Query: 528  ctgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaacacaccaa 587
            || |||||||| |||||||||||||  |||||||| || |||||||||||||||||||||
Sbjct: 1132 ctaaaatgcttcgccaacttctcaacatttttacttatcgcttcacagtcaacacaccaa 1073

                                                                        
Query: 588  ggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatccaatgta 647
            |||| || | |||| |||| ||| || ||| | |||| ||  ||||||||||| ||||||
Sbjct: 1072 ggtgtatgaacctcaaggaagacgttttgatgactttccagcacagaagaatcaaatgta 1013

                                                              
Query: 648  cgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
            || ||||||||||||||||  |||||||| ||||| || | |||||||||
Sbjct: 1012 cgaccaacaaccttttcaataagtcccttctcttgaggcaatggttctga 963



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 261  tatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagtttggagc 320
            ||||||||||||||||| |||||||  || |||||||| || ||||| ||  |||| |||
Sbjct: 1366 tatagctcatccttgacgttgtcaggggccgctactgtctccacgtctggtatttgcagc 1307

                       
Query: 321  ttctccttgat 331
            |||||||||||
Sbjct: 1306 ttctccttgat 1296
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>gb|AY111927.1| Zea mays CL33641_1 mRNA sequence
          Length = 805

 Score =  220 bits (111), Expect = 5e-54
 Identities = 289/350 (82%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
           ||||||||||||||||| | | | |||||||| || |  ||  ||||||||||||| || 
Sbjct: 330 tgcagcttctccttgatcagtttggccatgtccttgacactcgatttctttgaaagcttg 389

                                                                       
Query: 408 atcgggttggtcttgtcttcagcaggataaagcaagagtgtggggtaattgtttacctgc 467
           ||||||||| | |||||||||||| ||||||| || || || |||||||| || |||| |
Sbjct: 390 atcgggttgcttttgtcttcagcaagataaaggaatagcgtcgggtaattattcaccttc 449

                                                                       
Query: 468 aattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagattatccaaacca 527
           ||||| |||||||||||||| |||||||| || || |||||||||||||| ||| |||||
Sbjct: 450 aatttgggatgttcattcacagaagcatctatgcgcgcaaatttaagattgtccgaacca 509

                                                                       
Query: 528 ctgaaatgcttggccaacttctcaatgtttttactgatggcttcacagtcaacacaccaa 587
           || |||||||| |||| ||||||||       ||| || |||||||||||||||||||||
Sbjct: 510 ctaaaatgcttcgccagcttctcaacannnnnacttatcgcttcacagtcaacacaccaa 569

                                                                       
Query: 588 ggtgcataagcctccaggaggacattgtgagggctttgcaagacagaagaatccaatgta 647
           |||| || | |||| |||| ||| || ||| | |||| ||  ||||||||||| ||||||
Sbjct: 570 ggtgtatgaacctcaaggaagacgttttgatgactttccagcacagaagaatcaaatgta 629

                                                             
Query: 648 cgtccaacaaccttttcaactagtcccttttcttgtggtactggttctga 697
           || ||||||||||||||||  |||||||| ||||| || | |||||||||
Sbjct: 630 cgaccaacaaccttttcaataagtcccttctcttggggcaatggttctga 679



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 261 tatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagtttggagc 320
           ||||||||||||||||| |||||||  || |||||||| || ||||| ||  |||| |||
Sbjct: 276 tatagctcatccttgacgttgtcaggggccgctactgtctccacgtctggtatttgcagc 335

                      
Query: 321 ttctccttgat 331
           |||||||||||
Sbjct: 336 ttctccttgat 346
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  143 bits (72), Expect = 9e-31
 Identities = 125/143 (87%), Gaps = 6/143 (4%)
 Strand = Plus / Minus

                                                                           
Query: 458     gtttacctgcaattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagatt 517
               ||||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3201686 gtttacctgcaatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagatt 3201627

                                                                           
Query: 518     at------ccaaaccactgaaatgcttggccaacttctcaatgtttttactgatggcttc 571
               |       ||||| || ||||||| |||||||||||||| | ||||||||| ||||| ||
Sbjct: 3201626 agtctggcccaaatcattgaaatgtttggccaacttctccacgtttttacttatggcctc 3201567

                                      
Query: 572     acagtcaacacaccaaggtgcat 594
               |||||||||||||||||||||||
Sbjct: 3201566 acagtcaacacaccaaggtgcat 3201544



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                           
Query: 254     aatccactatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagt 313
               |||| |||||||||||||||||||| ||||| |||| |||||||||||||| || | | |
Sbjct: 3202587 aatctactatagctcatccttgacaatgtcaccagcggctactgtttcgacatccgcaat 3202528

                                
Query: 314     ttggagcttctccttga 330
               ||| |||||||||||||
Sbjct: 3202527 ttgcagcttctccttga 3202511



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                           
Query: 348     tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
               |||||||||||||||| |||| | |||||||| |||||  || |||||||||||||||||
Sbjct: 3202526 tgcagcttctccttgacgaattttgccatgtccttcagatttgatttctttgaaagtttt 3202467

                  
Query: 408     atc 410
               |||
Sbjct: 3202466 atc 3202464



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 633     gaagaatccaatgtacgtccaacaaccttttcaa 666
               |||||||| |||||||| ||||||||||||||||
Sbjct: 3201392 gaagaatcaaatgtacggccaacaaccttttcaa 3201359
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>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0681F10
          Length = 170371

 Score =  143 bits (72), Expect = 9e-31
 Identities = 125/143 (87%), Gaps = 6/143 (4%)
 Strand = Plus / Minus

                                                                          
Query: 458    gtttacctgcaattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagatt 517
              ||||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 155871 gtttacctgcaatttgggatgttcattcacagaagcatctatgcgtgcaaatttaagatt 155812

                                                                          
Query: 518    at------ccaaaccactgaaatgcttggccaacttctcaatgtttttactgatggcttc 571
              |       ||||| || ||||||| |||||||||||||| | ||||||||| ||||| ||
Sbjct: 155811 agtctggcccaaatcattgaaatgtttggccaacttctccacgtttttacttatggcctc 155752

                                     
Query: 572    acagtcaacacaccaaggtgcat 594
              |||||||||||||||||||||||
Sbjct: 155751 acagtcaacacaccaaggtgcat 155729



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                          
Query: 254    aatccactatagctcatccttgacattgtcagcagcagctactgtttcgacgtcaggagt 313
              |||| |||||||||||||||||||| ||||| |||| |||||||||||||| || | | |
Sbjct: 156772 aatctactatagctcatccttgacaatgtcaccagcggctactgtttcgacatccgcaat 156713

                               
Query: 314    ttggagcttctccttga 330
              ||| |||||||||||||
Sbjct: 156712 ttgcagcttctccttga 156696



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                          
Query: 348    tgcagcttctccttgatgaatctcgccatgtctttcaggcttaatttctttgaaagtttt 407
              |||||||||||||||| |||| | |||||||| |||||  || |||||||||||||||||
Sbjct: 156711 tgcagcttctccttgacgaattttgccatgtccttcagatttgatttctttgaaagtttt 156652

                 
Query: 408    atc 410
              |||
Sbjct: 156651 atc 156649



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 633    gaagaatccaatgtacgtccaacaaccttttcaa 666
              |||||||| |||||||| ||||||||||||||||
Sbjct: 155577 gaagaatcaaatgtacggccaacaaccttttcaa 155544
to top
>gb|BT013511.1| Lycopersicon esculentum clone 132204F, mRNA sequence
          Length = 2122

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 462  acctgcaattttggatgttcattcaccgaagcatcaatacgtgcaaatttaagattatcc 521
            ||||| ||||| ||||||||||| |  |||||||| || | ||||||  | |  ||||||
Sbjct: 1592 acctgtaatttcggatgttcatttagggaagcatctatccttgcaaagatcaagttatcc 1533

                                         
Query: 522  aaaccactgaaatgcttggccaacttctc 550
            |||||  ||||||||||||||||||||||
Sbjct: 1532 aaacctttgaaatgcttggccaacttctc 1504
to top
>ref|XM_550139.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 600

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 326 cttgatttcaacgtcagaaatctgcagct 354
           |||||||||||| ||||||||||||||||
Sbjct: 288 cttgatttcaacttcagaaatctgcagct 260
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 326     cttgatttcaacgtcagaaatctgcagct 354
               |||||||||||| ||||||||||||||||
Sbjct: 2576156 cttgatttcaacttcagaaatctgcagct 2576184
to top
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0416D03
          Length = 157112

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 326    cttgatttcaacgtcagaaatctgcagct 354
              |||||||||||| ||||||||||||||||
Sbjct: 130577 cttgatttcaacttcagaaatctgcagct 130605
to top
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434B04
          Length = 167029

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 326   cttgatttcaacgtcagaaatctgcagct 354
             |||||||||||| ||||||||||||||||
Sbjct: 25931 cttgatttcaacttcagaaatctgcagct 25959
to top
>emb|AL162399.12| Human DNA sequence from clone RP11-545I10 on chromosome 1 Contains the
             5' end of a novel gene, the gene for NTKL-binding protein
             1 and a novel gene, complete sequence
          Length = 91639

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcatcatatatatttttagat 122
             ||||||||||||||||||||||
Sbjct: 88181 ttcatcatatatatttttagat 88160
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>ref|XM_639743.1| Dictyostelium discoideum hypothetical protein (DDB0168168), partial
           mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 attcatcatatatatttttag 120
           |||||||||||||||||||||
Sbjct: 653 attcatcatatatatttttag 673
to top
>ref|XM_639323.1| Dictyostelium discoideum hypothetical protein (DDB0217212), partial
           mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 attcatcatatatatttttag 120
           |||||||||||||||||||||
Sbjct: 653 attcatcatatatatttttag 673
to top
>gb|BC073554.1| Xenopus laevis MGC82837 protein, mRNA (cDNA clone MGC:82837
            IMAGE:5506768), complete cds
          Length = 1464

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    actttatttattataatacat 26
            |||||||||||||||||||||
Sbjct: 1437 actttatttattataatacat 1417
to top
>gb|AC115684.2| Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4,
             complete sequence
          Length = 82139

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   attcatcatatatatttttag 120
             |||||||||||||||||||||
Sbjct: 69213 attcatcatatatatttttag 69193
to top
>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13
            Contains STSs, GSSs and a putative CpG island, complete
            sequence
          Length = 82183

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 440  caagagtgtggggtaattgtt 460
            |||||||||||||||||||||
Sbjct: 9785 caagagtgtggggtaattgtt 9765
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>emb|AL133174.15| Human DNA sequence from clone RP3-470L14 on chromosome 20 Contains the
             CSE1L gene for chromosome segregation 1 (yeast
             homolog)-like protein, the STAU gene for staufen
             RNA-binding protein (Drosophila), ARPC3 (actin related
             protein 2/3 complex,subunit 3, 21KDa) pseudogene and a CpG
             island, complete sequence
          Length = 113836

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 506   aaatttaagattatccaaacc 526
             |||||||||||||||||||||
Sbjct: 16804 aaatttaagattatccaaacc 16784
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>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3
          Length = 67970

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    ttatttattataatacatgaa 29
            |||||||||||||||||||||
Sbjct: 4406 ttatttattataatacatgaa 4426
to top
>emb|CR859395.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1929 (from clone DKFZp459E1929)
          Length = 3556

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 506  aaatttaagattatccaaacc 526
            |||||||||||||||||||||
Sbjct: 3321 aaatttaagattatccaaacc 3301
to top
>ref|NM_001316.2| Homo sapiens CSE1 chromosome segregation 1-like (yeast) (CSE1L), mRNA
          Length = 3579

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 506  aaatttaagattatccaaacc 526
            |||||||||||||||||||||
Sbjct: 3344 aaatttaagattatccaaacc 3324
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>emb|BX469926.18| Zebrafish DNA sequence from clone DKEY-229E3 in linkage group 20,
             complete sequence
          Length = 242408

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   tcatcatatatatttttagat 122
             |||||||||||||||||||||
Sbjct: 50016 tcatcatatatatttttagat 49996
to top
>gb|AF053651.1|HSCSE1G9 Homo sapiens cellular apoptosis susceptibility protein (CSE1) gene,
            exons 23, 24 and 25, and complete cds
          Length = 3281

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 506  aaatttaagattatccaaacc 526
            |||||||||||||||||||||
Sbjct: 2945 aaatttaagattatccaaacc 2925
to top
>gb|AF053642.1|AF053642 Homo sapiens liver cellular apoptosis susceptibilty protein (CSE1)
            mRNA, partial cds
          Length = 1418

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 506  aaatttaagattatccaaacc 526
            |||||||||||||||||||||
Sbjct: 1182 aaatttaagattatccaaacc 1162
to top
>gb|AF053641.1|AF053641 Homo sapiens brain cellular apoptosis susceptibility protein (CSE1)
            mRNA, complete cds
          Length = 3569

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 506  aaatttaagattatccaaacc 526
            |||||||||||||||||||||
Sbjct: 3333 aaatttaagattatccaaacc 3313
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>gb|BC087550.1| Xenopus laevis cDNA clone IMAGE:5506254
          Length = 1498

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   actttatttattataataca 25
           ||||||||||||||||||||
Sbjct: 481 actttatttattataataca 462
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>gb|BC085199.1| Xenopus laevis cDNA clone IMAGE:4057028
          Length = 3748

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 3273 actttatttattataataca 3292
to top
>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the complete
             sequence
          Length = 180450

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 652   caacaaccttttcaactagt 671
             ||||||||||||||||||||
Sbjct: 13188 caacaaccttttcaactagt 13169



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 652   caacaaccttttcaactagt 671
             ||||||||||||||||||||
Sbjct: 13080 caacaaccttttcaactagt 13061
to top
>gb|BC078076.1| Xenopus laevis holocytochrome c synthase (cytochrome c heme-lyase),
            mRNA (cDNA clone MGC:82976 IMAGE:5515656), complete cds
          Length = 2088

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1266 actttatttattataataca 1247
to top
>gb|BC077388.1| Xenopus laevis cleavage and polyadenylation specific factor 6, 68kDa,
            mRNA (cDNA clone MGC:81654 IMAGE:6864420), complete cds
          Length = 3436

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 3265 actttatttattataataca 3284
to top
>gb|BC079816.1| Xenopus laevis MGC86474 protein, mRNA (cDNA clone MGC:86474
            IMAGE:4680026), complete cds
          Length = 2666

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2443 actttatttattataataca 2424
to top
>gb|BC081003.1| Xenopus laevis MGC81274 protein, mRNA (cDNA clone MGC:81274
            IMAGE:6631737), complete cds
          Length = 2842

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2281 actttatttattataataca 2300
to top
>gb|BC080063.1| Xenopus laevis MGC84042 protein, mRNA (cDNA clone MGC:84042
            IMAGE:6947891), complete cds
          Length = 4815

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2854 actttatttattataataca 2873
to top
>gb|BC079697.1| Xenopus laevis MGC80854 protein, mRNA (cDNA clone MGC:80854
            IMAGE:5514609), complete cds
          Length = 3105

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2227 actttatttattataataca 2246
to top
>gb|BC073100.1| Xenopus laevis MGC83562 protein, mRNA (cDNA clone MGC:83562
            IMAGE:5079281), complete cds
          Length = 3501

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2610 actttatttattataataca 2591
to top
>gb|BC072971.1| Xenopus laevis MGC82519 protein, mRNA (cDNA clone MGC:82519
            IMAGE:4963852), complete cds
          Length = 4490

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1521 actttatttattataataca 1502
to top
>gb|BC078036.1| Xenopus laevis cDNA clone MGC:82763 IMAGE:5156829, complete cds
          Length = 2017

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1740 actttatttattataataca 1721
to top
>gb|BC070641.1| Xenopus laevis hypothetical protein MGC81501, mRNA (cDNA clone
            MGC:81501 IMAGE:6636937), complete cds
          Length = 3312

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1545 actttatttattataataca 1564
to top
>gb|BC070612.1| Xenopus laevis hypothetical protein MGC81341, mRNA (cDNA clone
            MGC:81341 IMAGE:6633275), complete cds
          Length = 4789

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2799 actttatttattataataca 2818
to top
>gb|BC068820.1| Xenopus laevis hypothetical protein MGC81434, mRNA (cDNA clone
            MGC:81434 IMAGE:6635623), complete cds
          Length = 3433

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2058 actttatttattataataca 2039



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1804 actttatttattataataca 1785
to top
>gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome 19, complete sequence
          Length = 179063

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   ttggagcttctccttgattt 333
             ||||||||||||||||||||
Sbjct: 54441 ttggagcttctccttgattt 54460
to top
>gb|AC161572.4| Mus musculus chromosome 15, clone RP23-358J10, complete sequence
          Length = 218429

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    atcaacccctactctatttccttc 164
              |||||||||| |||||||||||||
Sbjct: 173290 atcaaccccttctctatttccttc 173313
to top
>gb|AY915719.1| Schistosoma japonicum SJCHGC08932 protein mRNA, partial cds
          Length = 439

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 attcatcatatatatttttagatg 123
           ||||||||||||||| ||||||||
Sbjct: 90  attcatcatatatatatttagatg 67
to top
>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence
          Length = 247961

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 680    ttgtggtactggttctgagc 699
              ||||||||||||||||||||
Sbjct: 212471 ttgtggtactggttctgagc 212452
to top
>gb|AC150774.2| Xenopus tropicalis clone CH216-82E5, complete sequence
          Length = 87104

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttatttattataatacatga 28
             ||||||||||||||||||||
Sbjct: 59927 ttatttattataatacatga 59946
to top
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    aattgtttacctgcaatttt 473
              ||||||||||||||||||||
Sbjct: 149169 aattgtttacctgcaatttt 149188



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    aattgtttacctgcaatttt 473
              ||||||||||||||||||||
Sbjct: 148540 aattgtttacctgcaatttt 148559
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>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence
          Length = 156977

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   attcatcatatatattttta 119
             ||||||||||||||||||||
Sbjct: 51488 attcatcatatatattttta 51469
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>gb|AC115039.7| Mus musculus chromosome 6, clone RP24-279C2, complete sequence
          Length = 195362

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 552    atgtttttactgatggcttc 571
              ||||||||||||||||||||
Sbjct: 163247 atgtttttactgatggcttc 163228
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>gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosome 15, complete
             sequence
          Length = 171980

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ctttatttattataatacat 26
             ||||||||||||||||||||
Sbjct: 79556 ctttatttattataatacat 79537
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>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    aattgtttacctgcaatttt 473
              ||||||||||||||||||||
Sbjct: 167071 aattgtttacctgcaatttt 167052



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    aattgtttacctgcaatttt 473
              ||||||||||||||||||||
Sbjct: 166442 aattgtttacctgcaatttt 166423
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>gb|AC125094.5| Mus musculus BAC clone RP24-176L12 from chromosome 16, complete
             sequence
          Length = 170842

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ctgactttatttattataat 22
             ||||||||||||||||||||
Sbjct: 78601 ctgactttatttattataat 78582
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>gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, complete sequence
          Length = 167735

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ttttagatgcctactgtgta 134
             ||||||||||||||||||||
Sbjct: 79966 ttttagatgcctactgtgta 79985
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>gb|AC002486.1| Homo sapiens BAC clone CTA-367O17 from 7, complete sequence
          Length = 79611

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   atcatatatatttttagatg 123
             ||||||||||||||||||||
Sbjct: 22611 atcatatatatttttagatg 22592
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>gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete sequence
          Length = 166977

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     actttatttattataataca 25
             ||||||||||||||||||||
Sbjct: 25243 actttatttattataataca 25262
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>emb|AL358858.19| Human DNA sequence from clone RP11-239I22 on chromosome 1 Contains part
             of the USH2A gene for Usher syndrome 2A (autosomal
             recessive, mild), complete sequence
          Length = 93856

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   aaatttaagattatccaaac 525
             ||||||||||||||||||||
Sbjct: 75755 aaatttaagattatccaaac 75774
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>emb|AL139322.13| Human DNA sequence from clone RP11-196P14 on chromosome 13 Contains the
              ITM2B gene for integral membrane protein 2B (BRI FBD E25B
              E3-16) and a CpG island, complete sequence
          Length = 120773

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 674    cttttcttgtggtactggtt 693
              ||||||||||||||||||||
Sbjct: 110259 cttttcttgtggtactggtt 110278
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>gb|AF212160.2| Xenopus laevis myogenic regulatory protein myf-5 gene, promoter
           region and partial cds
          Length = 6913

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   actttatttattataataca 25
           ||||||||||||||||||||
Sbjct: 927 actttatttattataataca 908
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>gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome 16, complete sequence
          Length = 213324

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ctgactttatttattataat 22
             ||||||||||||||||||||
Sbjct: 52703 ctgactttatttattataat 52722
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>emb|AJ850135.1| Xenopus laevis foxD5a gene for Fox protein
          Length = 8677

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1881 actttatttattataataca 1900
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>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24,
              complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     atcaattcatcatatatattttta 119
              ||||||||||||||| ||||||||
Sbjct: 162941 atcaattcatcatatttattttta 162964
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>emb|BX663615.15| Zebrafish DNA sequence from clone DKEY-14B2 in linkage group 7, complete
              sequence
          Length = 212543

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    agatatgccatcattttcct 225
              ||||||||||||||||||||
Sbjct: 210003 agatatgccatcattttcct 210022
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>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16,
             complete sequence
          Length = 165294

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   attcatcatatatattttta 119
             ||||||||||||||||||||
Sbjct: 21916 attcatcatatatattttta 21935
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>dbj|AB219931.1| Xenopus laevis Xnr5-a, Xnr5-b, Xnr5-c genes, partial and complete cds
          Length = 14029

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     actttatttattataataca 25
             ||||||||||||||||||||
Sbjct: 12040 actttatttattataataca 12021



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 5642 actttatttattataataca 5623
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>gb|DQ378291.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmid
             47B4, complete sequence
          Length = 37265

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    atcaattcatcatatatattttta 119
             ||||||||||||||| ||||||||
Sbjct: 10918 atcaattcatcatatctattttta 10895
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>gb|AC079269.8| Homo sapiens chromosome 10 clone RP11-379L21, complete sequence
          Length = 196004

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    tgcaattttggatgttcatt 484
              ||||||||||||||||||||
Sbjct: 112796 tgcaattttggatgttcatt 112777
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>gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, complete sequence
          Length = 169512

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ttttactgatggcttcacag 575
             ||||||||||||||||||||
Sbjct: 12437 ttttactgatggcttcacag 12418
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>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence
          Length = 128950

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 141  atcaacccctactctatttccttc 164
            |||||||||| |||||||||||||
Sbjct: 7710 atcaaccccttctctatttccttc 7733
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>gb|BC082858.1| Xenopus laevis protein phospatase 3 regulatory subunit B alpha
            isoform type 1, mRNA (cDNA clone MGC:81755
            IMAGE:6865868), complete cds
          Length = 2874

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 1695 actttatttattataataca 1714
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>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence
          Length = 194086

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 680    ttgtggtactggttctgagc 699
              ||||||||||||||||||||
Sbjct: 120189 ttgtggtactggttctgagc 120208
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>gb|BC090056.1| Xenopus laevis cDNA clone MGC:69062 IMAGE:4965751, complete cds
          Length = 4453

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2846 actttatttattataataca 2865
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>gb|AF283102.1|AF283102 Xenopus laevis Nkx2-5 (Nkx2-5) gene, promoter region and partial
           cds
          Length = 6152

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   actttatttattataataca 25
           ||||||||||||||||||||
Sbjct: 730 actttatttattataataca 749
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>gb|BC044274.1| Xenopus laevis, clone IMAGE:5542776, mRNA
          Length = 3360

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2167 actttatttattataataca 2186
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>gb|BC042357.1| Xenopus laevis MGC82035 protein, mRNA (cDNA clone IMAGE:4683972)
          Length = 3613

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttatttattataataca 25
            ||||||||||||||||||||
Sbjct: 2958 actttatttattataataca 2939
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>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete
             sequence
          Length = 213263

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   tttttagatgcctactgtgt 133
             ||||||||||||||||||||
Sbjct: 82896 tttttagatgcctactgtgt 82877
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>emb|AL928887.13| Zebrafish DNA sequence from clone CH211-136O14 in linkage group 23,
              complete sequence
          Length = 174456

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     aattcatcatatatattttt 118
              ||||||||||||||||||||
Sbjct: 165069 aattcatcatatatattttt 165088
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>emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-196A3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176202

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tctatttccttctctataaa 172
             ||||||||||||||||||||
Sbjct: 42555 tctatttccttctctataaa 42536
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>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 185763

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 627    aagacagaagaatccaatgt 646
              ||||||||||||||||||||
Sbjct: 126686 aagacagaagaatccaatgt 126705
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>emb|AL160211.2|CNS01RGV Human chromosome 14 DNA sequence BAC R-134J10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164514

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    attataatacatgaagaagc 34
             ||||||||||||||||||||
Sbjct: 31522 attataatacatgaagaagc 31503
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>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16,
              complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    attcatcatatatattttta 119
              ||||||||||||||||||||
Sbjct: 144008 attcatcatatatattttta 143989
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>gb|AC151323.2| Xenopus tropicalis clone ISB-253E6, complete sequence
          Length = 74805

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     actttatttattataataca 25
             ||||||||||||||||||||
Sbjct: 16796 actttatttattataataca 16777
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>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence
          Length = 187733

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ctttatttattataatacat 26
             ||||||||||||||||||||
Sbjct: 52888 ctttatttattataatacat 52907
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>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence
          Length = 185272

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    atgtttttactgatggcttc 571
              ||||||||||||||||||||
Sbjct: 161798 atgtttttactgatggcttc 161817
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>emb|AL133239.4|CNS01DUC Human chromosome 14 DNA sequence BAC R-71I8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 131637

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     attataatacatgaagaagc 34
              ||||||||||||||||||||
Sbjct: 116654 attataatacatgaagaagc 116635
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>emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chromosome 2, complete
              sequence
          Length = 209502

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    attcatcatatatattttta 119
              ||||||||||||||||||||
Sbjct: 128551 attcatcatatatattttta 128532


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,415,293
Number of Sequences: 3902068
Number of extensions: 8415293
Number of successful extensions: 171131
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 170810
Number of HSP's gapped (non-prelim): 313
length of query: 700
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 677
effective length of database: 17,143,297,704
effective search space: 11606012545608
effective search space used: 11606012545608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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