Clone Name | rbags9j19 |
---|---|
Clone Library Name | barley_pub |
>Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor| Length = 325 Score = 164 bits (414), Expect = 3e-40 Identities = 76/95 (80%), Positives = 88/95 (92%) Frame = -3 Query: 688 EQYLADSGVPYTIIRAGGLQDKDGGVRELIVGKDDEILKTETKTVARADVAEVCIQALLF 509 EQYLADSG+PYTIIRAGGLQDKDGG+REL+VGKDDE+L+TET+T+ARADVAEVC+QAL Sbjct: 231 EQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQL 290 Query: 508 EEAKFKAFDLASKPEGEGTPTTDFKSVFAQIATRF 404 EEAKFKA DLASKPEG GTPT DFK++F Q+ T+F Sbjct: 291 EEAKFKALDLASKPEGTGTPTKDFKALFTQVTTKF 325
>Y5224_ARATH (Q94EG6) Protein At5g02240| Length = 253 Score = 157 bits (397), Expect = 3e-38 Identities = 76/95 (80%), Positives = 86/95 (90%) Frame = -3 Query: 688 EQYLADSGVPYTIIRAGGLQDKDGGVRELIVGKDDEILKTETKTVARADVAEVCIQALLF 509 EQYLADSG PYTIIRAGGL DK+GGVREL+VGKDDE+L+T+TKTV RADVAEVCIQALLF Sbjct: 159 EQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLF 218 Query: 508 EEAKFKAFDLASKPEGEGTPTTDFKSVFAQIATRF 404 EEAK KAFDL SKPEG TPT DFK++F+Q+ +RF Sbjct: 219 EEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253
>OSBL5_MOUSE (Q9ER64) Oxysterol-binding protein-related protein 5 (OSBP-related| protein 5) (ORP-5) (Oxysterol-binding protein homolog 1) Length = 874 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +3 Query: 69 TVSLHVWHVARRRINREDNCCNLDHPVSQSPWL*LGTKG 185 TV LH + R ++ C L HP+ QS W G KG Sbjct: 168 TVLLHCCELIERPSKKDGFCFKLFHPLDQSVWAVKGPKG 206
>IFEA_HELAS (P22488) Non-neuronal cytoplasmic intermediate filament protein| (IF) Length = 575 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -3 Query: 649 IRAGGLQDKDGGVRELI--VGKDDEILKTETKTVARADVAEVCIQALLFEEAKF 494 IR G L+D++ VREL+ + + + L+ + T A + C+ EEA+F Sbjct: 194 IRCGSLEDENAKVRELLDKIQEQNRRLRADLDTETAAHIEADCLAQTKTEEAEF 247
>OSBL5_HUMAN (Q9H0X9) Oxysterol-binding protein-related protein 5 (OSBP-related| protein 5) (ORP-5) Length = 879 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +3 Query: 69 TVSLHVWHVARRRINREDNCCNLDHPVSQSPWL*LGTKG 185 TV LH + R ++ C L HP+ QS W G KG Sbjct: 168 TVLLHCCELIERPSKKDGFCFKLFHPLDQSVWAVKGPKG 206
>PARM1_PONPY (Q5RAF8) Protein PARM-1 precursor| Length = 310 Score = 29.6 bits (65), Expect = 9.1 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = +3 Query: 456 PSPSGFEARSNALNFASSNSKACMQTSATSALATXXXXXXX-XXXXXPTINSRTPPSLSC 632 PSP GF + S ++ ++ + + T AT P + +P SLS Sbjct: 104 PSPPGFSSTSGGVHLTTTLEEHSLGTPEAGVAATLSQSAAEPPTLISPQAPASSPSSLST 163 Query: 633 SPPALIIV 656 SPP + V Sbjct: 164 SPPEVFSV 171
>PARM1_HUMAN (Q6UWI2) Protein PARM-1 precursor| Length = 310 Score = 29.6 bits (65), Expect = 9.1 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = +3 Query: 456 PSPSGFEARSNALNFASSNSKACMQTSATSALATXXXXXXX-XXXXXPTINSRTPPSLSC 632 PSPSGF + S ++ ++ + T AT P + +P SLS Sbjct: 104 PSPSGFSSTSGGVHLTTTLEEHSSGTPEAGVAATLSQSAAEPPTLISPQAPASSPSSLST 163 Query: 633 SPP 641 SPP Sbjct: 164 SPP 166
>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1373 Score = 29.6 bits (65), Expect = 9.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 656 HNYKSWRTTRQRWWCA*VDCWKGRRDLED*NKNCCQGRCCRSLHT 522 +NY+ W T R + C V C G+R + N CC C S HT Sbjct: 201 YNYRCWTTNRCQKMCPSV-C--GKRACTE-NNECCHPECLGSCHT 241
>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1370 Score = 29.6 bits (65), Expect = 9.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 656 HNYKSWRTTRQRWWCA*VDCWKGRRDLED*NKNCCQGRCCRSLHT 522 +NY+ W T R + C V C G+R + N CC C S HT Sbjct: 201 YNYRCWTTNRCQKMCPSV-C--GKRACTE-NNECCHPECLGSCHT 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,546,999 Number of Sequences: 219361 Number of extensions: 1785580 Number of successful extensions: 4691 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4690 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)