ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 630 e-177
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 630 e-177
3emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb... 630 e-177
4dbj|AK119516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 622 e-175
5gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence 444 e-121
6gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence 436 e-119
7gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, compl... 42 2.5
8gb|AC004109.1| Homo sapiens PAC clone RP4-608H12 from 7, complet... 42 2.5
9gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromos... 42 2.5
10gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 42 2.5
11gb|AC148409.2| X. tropicalis BAC clone ISB1-267G18 containing ge... 40 9.8
12emb|AL672213.5| Zebrafish DNA sequence from clone BUSM1-73O4 Con... 40 9.8
13emb|AL596027.11| Zebrafish DNA sequence from clone XX-51F19 in l... 40 9.8
14emb|AL596024.5| Zebrafish DNA sequence from clone BUSM1-199M19 i... 40 9.8
15gb|BC042991.1| Homo sapiens cDNA clone IMAGE:5296604 40 9.8
16gb|AC127520.5| Homo sapiens chromosome 15, clone RP11-825M14, co... 40 9.8
17emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in... 40 9.8
18gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.8
19dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.8
20gb|AF226719.1|AF226719 Trichomonas vaginalis chaperonin subunit ... 40 9.8
21gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 9.8
22emb|AL512791.3|CNS07EFF Human chromosome 14 DNA sequence BAC R-4... 40 9.8
23emb|AL672166.8| Zebrafish DNA sequence from clone XX-134G18, com... 40 9.8
24emb|AL672197.12| Zebrafish DNA sequence from clone XX-102M24 in ... 40 9.8
25gb|AC006536.2|AC006536 Homo sapiens chromosome 14 clone BAC257P1... 40 9.8
26emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1... 40 9.8
27gb|AC002468.1|AC002468 Human Chromosome 15q26.1 PAC clone pDJ417... 40 9.8

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  630 bits (318), Expect = e-177
 Identities = 568/646 (87%), Gaps = 4/646 (0%)
 Strand = Plus / Minus

                                                                            
Query: 39       atatacacatcatttgtacat-ggtgagcctggaggcaga-gcatccag-aacatcagtc 95
                ||||||||||||| ||||||  ||||||| ||||| || | |||||||| ||||||||||
Sbjct: 24492666 atatacacatcatctgtacaaaggtgagcttggagccaaaagcatccaggaacatcagtc 24492607

                                                                            
Query: 96       tacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatccgggatgac 155
                |||||||||||||||||| |||||||| ||||||||||| || || || || ||||||||
Sbjct: 24492606 tacaagccagtccaggttataacactcttctgctacctgaacccggaggtctgggatgac 24492547

                                                                            
Query: 156      ctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtgcccgaggga 215
                |||||| |||||||||||||||| |||||| ||||| || ||||||||||||||||||||
Sbjct: 24492546 ctgctcagcttccctccacagcaacgccgtctcctcgtcgcacacgacgtgcccgaggga 24492487

                                                                            
Query: 216      cttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccgcatgtcgat 275
                ||| | ||| ||||| |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 24492486 cttgagcgatgaggacgacctcgggaggctcctcagtcgcgagcattctcgcatgtcgat 24492427

                                                                            
Query: 276      cttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggttaatgcactg 335
                |||||| ||| |||||| |||||| ||||| || || ||||| || ||||| |  |||||
Sbjct: 24492426 cttctccaggcttgtcaggtgaccgagctcctcagggaggtccgtcaggttgacacactg 24492367

                                                                            
Query: 336      cgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaagcttccacag 395
                ||| ||||| |||||||||| |||||||||||||||||||||||| || |||  ||||||
Sbjct: 24492366 cgaaatgtcgaggtatttcagcctcttcaggctgcataccgaaggcgggagccgccacag 24492307

                                                                            
Query: 396      tgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccagctcatatgg 455
                 |||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||
Sbjct: 24492306 agccgggcaggcgtatacccttaggatgctcaggcaatgcagcttgcccagctcatatgg 24492247

                                                                            
Query: 456      cagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagctgatttcaca 515
                 |||||||||||||||||||||||||| | ||||||||| ||||| || |||||||||||
Sbjct: 24492246 aagctctgtgaggtcatggcagtttgagatggagatgctctccagggaactgatttcaca 24492187

                                                                            
Query: 516      taaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggttggataggcg 575
                ||  |||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 24492186 tatgctagatggtagctccttcaggtctatgcagtggtcaatggtgaggttggataggcg 24492127

                                                                            
Query: 576      cggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttcagctcacaaa 635
                ||| || ||||| |||||||||| | |||| |||||  ||||||||| |||||||||| |
Sbjct: 24492126 cgggaatgtcatcgagagatccacctttga-tcctctcagactgttggtcagctcacaga 24492068

                                                              
Query: 636      ggacgagggagatcttgcgtaggttcttcagtgggattgtgctttt 681
                |||| ||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 24492067 ggacaagggatatcttgcgcaggttcttcagtgggattgtggtttt 24492022



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  630 bits (318), Expect = e-177
 Identities = 568/646 (87%), Gaps = 4/646 (0%)
 Strand = Plus / Minus

                                                                            
Query: 39       atatacacatcatttgtacat-ggtgagcctggaggcaga-gcatccag-aacatcagtc 95
                ||||||||||||| ||||||  ||||||| ||||| || | |||||||| ||||||||||
Sbjct: 24420872 atatacacatcatctgtacaaaggtgagcttggagccaaaagcatccaggaacatcagtc 24420813

                                                                            
Query: 96       tacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatccgggatgac 155
                |||||||||||||||||| |||||||| ||||||||||| || || || || ||||||||
Sbjct: 24420812 tacaagccagtccaggttataacactcttctgctacctgaacccggaggtctgggatgac 24420753

                                                                            
Query: 156      ctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtgcccgaggga 215
                |||||| |||||||||||||||| |||||| ||||| || ||||||||||||||||||||
Sbjct: 24420752 ctgctcagcttccctccacagcaacgccgtctcctcgtcgcacacgacgtgcccgaggga 24420693

                                                                            
Query: 216      cttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccgcatgtcgat 275
                ||| | ||| ||||| |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 24420692 cttgagcgatgaggacgacctcgggaggctcctcagtcgcgagcattctcgcatgtcgat 24420633

                                                                            
Query: 276      cttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggttaatgcactg 335
                |||||| ||| |||||| |||||| ||||| || || ||||| || ||||| |  |||||
Sbjct: 24420632 cttctccaggcttgtcaggtgaccgagctcctcagggaggtccgtcaggttgacacactg 24420573

                                                                            
Query: 336      cgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaagcttccacag 395
                ||| ||||| |||||||||| |||||||||||||||||||||||| || |||  ||||||
Sbjct: 24420572 cgaaatgtcgaggtatttcagcctcttcaggctgcataccgaaggcgggagccgccacag 24420513

                                                                            
Query: 396      tgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccagctcatatgg 455
                 |||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||
Sbjct: 24420512 agccgggcaggcgtatacccttaggatgctcaggcaatgcagcttgcccagctcatatgg 24420453

                                                                            
Query: 456      cagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagctgatttcaca 515
                 |||||||||||||||||||||||||| | ||||||||| ||||| || |||||||||||
Sbjct: 24420452 aagctctgtgaggtcatggcagtttgagatggagatgctctccagggaactgatttcaca 24420393

                                                                            
Query: 516      taaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggttggataggcg 575
                ||  |||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 24420392 tatgctagatggtagctccttcaggtctatgcagtggtcaatggtgaggttggataggcg 24420333

                                                                            
Query: 576      cggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttcagctcacaaa 635
                ||| || ||||| |||||||||| | |||| |||||  ||||||||| |||||||||| |
Sbjct: 24420332 cgggaatgtcatcgagagatccacctttga-tcctctcagactgttggtcagctcacaga 24420274

                                                              
Query: 636      ggacgagggagatcttgcgtaggttcttcagtgggattgtgctttt 681
                |||| ||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 24420273 ggacaagggatatcttgcgcaggttcttcagtgggattgtggtttt 24420228



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>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120071

 Score =  630 bits (318), Expect = e-177
 Identities = 568/646 (87%), Gaps = 4/646 (0%)
 Strand = Plus / Minus

                                                                         
Query: 39    atatacacatcatttgtacat-ggtgagcctggaggcaga-gcatccag-aacatcagtc 95
             ||||||||||||| ||||||  ||||||| ||||| || | |||||||| ||||||||||
Sbjct: 63697 atatacacatcatctgtacaaaggtgagcttggagccaaaagcatccaggaacatcagtc 63638

                                                                         
Query: 96    tacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatccgggatgac 155
             |||||||||||||||||| |||||||| ||||||||||| || || || || ||||||||
Sbjct: 63637 tacaagccagtccaggttataacactcttctgctacctgaacccggaggtctgggatgac 63578

                                                                         
Query: 156   ctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtgcccgaggga 215
             |||||| |||||||||||||||| |||||| ||||| || ||||||||||||||||||||
Sbjct: 63577 ctgctcagcttccctccacagcaacgccgtctcctcgtcgcacacgacgtgcccgaggga 63518

                                                                         
Query: 216   cttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccgcatgtcgat 275
             ||| | ||| ||||| |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 63517 cttgagcgatgaggacgacctcgggaggctcctcagtcgcgagcattctcgcatgtcgat 63458

                                                                         
Query: 276   cttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggttaatgcactg 335
             |||||| ||| |||||| |||||| ||||| || || ||||| || ||||| |  |||||
Sbjct: 63457 cttctccaggcttgtcaggtgaccgagctcctcagggaggtccgtcaggttgacacactg 63398

                                                                         
Query: 336   cgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaagcttccacag 395
             ||| ||||| |||||||||| |||||||||||||||||||||||| || |||  ||||||
Sbjct: 63397 cgaaatgtcgaggtatttcagcctcttcaggctgcataccgaaggcgggagccgccacag 63338

                                                                         
Query: 396   tgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccagctcatatgg 455
              |||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||
Sbjct: 63337 agccgggcaggcgtatacccttaggatgctcaggcaatgcagcttgcccagctcatatgg 63278

                                                                         
Query: 456   cagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagctgatttcaca 515
              |||||||||||||||||||||||||| | ||||||||| ||||| || |||||||||||
Sbjct: 63277 aagctctgtgaggtcatggcagtttgagatggagatgctctccagggaactgatttcaca 63218

                                                                         
Query: 516   taaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggttggataggcg 575
             ||  |||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 63217 tatgctagatggtagctccttcaggtctatgcagtggtcaatggtgaggttggataggcg 63158

                                                                         
Query: 576   cggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttcagctcacaaa 635
             ||| || ||||| |||||||||| | |||| |||||  ||||||||| |||||||||| |
Sbjct: 63157 cgggaatgtcatcgagagatccacctttga-tcctctcagactgttggtcagctcacaga 63099

                                                           
Query: 636   ggacgagggagatcttgcgtaggttcttcagtgggattgtgctttt 681
             |||| ||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 63098 ggacaagggatatcttgcgcaggttcttcagtgggattgtggtttt 63053



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>dbj|AK119516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C04, full
            insert sequence
          Length = 1937

 Score =  622 bits (314), Expect = e-175
 Identities = 567/646 (87%), Gaps = 4/646 (0%)
 Strand = Plus / Minus

                                                                        
Query: 39   atatacacatcatttgtacat-ggtgagcctggaggcaga-gcatccag-aacatcagtc 95
            ||||||||||||| ||||||  ||||||| ||||| || | |||||||| ||||||||||
Sbjct: 1895 atatacacatcatctgtacaaaggtgagcttggagccaaaagcatccaggaacatcagtc 1836

                                                                        
Query: 96   tacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatccgggatgac 155
            |||||||||||||||||| |||||||| ||||||||||| || || || || ||||||||
Sbjct: 1835 tacaagccagtccaggttataacactcttctgctacctgaacccggaggtctgggatgac 1776

                                                                        
Query: 156  ctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtgcccgaggga 215
            |||||| |||||||||||||||| |||||| ||||| || ||||||||||||||||||||
Sbjct: 1775 ctgctcagcttccctccacagcaacgccgtctcctcgtcgcacacgacgtgcccgaggga 1716

                                                                        
Query: 216  cttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccgcatgtcgat 275
            ||| | ||| ||||| |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 1715 cttgagcgatgaggacgacctcgggaggctcctcagtcgcgagcattctcgcatgtcgat 1656

                                                                        
Query: 276  cttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggttaatgcactg 335
            |||||| ||| |||||| |||||| ||||| || || ||||| || ||||| |  |||||
Sbjct: 1655 cttctccaggcttgtcaggtgaccgagctcctcagggaggtccgtcaggttgacacactg 1596

                                                                        
Query: 336  cgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaagcttccacag 395
            ||| ||||| |||||||||| |||||||||||||||||||||||| || |||  ||||||
Sbjct: 1595 cgaaatgtcgaggtatttcagcctcttcaggctgcataccgaaggcgggagccgccacag 1536

                                                                        
Query: 396  tgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccagctcatatgg 455
             |||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||
Sbjct: 1535 agccgggcaggcgtatacccttaggatgctcaggcaatgcagcttgcccagctcatatgg 1476

                                                                        
Query: 456  cagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagctgatttcaca 515
             |||||||||||||||||||||||||  | ||||||||| ||||| || |||||||||||
Sbjct: 1475 aagctctgtgaggtcatggcagtttgggatggagatgctctccagggaactgatttcaca 1416

                                                                        
Query: 516  taaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggttggataggcg 575
            ||  |||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 1415 tatgctagatggtagctccttcaggtctatgcagtggtcaatggtgaggttggataggcg 1356

                                                                        
Query: 576  cggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttcagctcacaaa 635
            ||| || ||||| |||||||||| | |||| |||||  ||||||||| |||||||||| |
Sbjct: 1355 cgggaatgtcatcgagagatccacctttga-tcctctcagactgttggtcagctcacaga 1297

                                                          
Query: 636  ggacgagggagatcttgcgtaggttcttcagtgggattgtgctttt 681
            |||| ||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 1296 ggacaagggatatcttgcgcaggttcttcagtgggattgtggtttt 1251



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>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence
          Length = 125927

 Score =  444 bits (224), Expect = e-121
 Identities = 513/608 (84%), Gaps = 1/608 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    acatcagtctacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatc 146
             |||||||||  | ||||||||||||||||| ||||| || || ||||| || || || ||
Sbjct: 92402 acatcagtccgctagccagtccaggttgtagcactcttcggccacctgaacccggaggtc 92343

                                                                         
Query: 147   cgggatgacctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtg 206
              ||||||||||||||||| ||||||||||||| |||||| ||||| || |||||||||||
Sbjct: 92342 agggatgacctgctcggcctccctccacagcagcgccgtctcctcgtcgcacacgacgtg 92283

                                                                         
Query: 207   cccgagggacttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccg 266
              ||||||||||| | |||||| || |||| ||||||||||||||  || ||||| || ||
Sbjct: 92282 gccgagggacttgagcgacgacgacgaccgcgggaggctcctcaggcgggagcactcgcg 92223

                                                                         
Query: 267   catgtcgatcttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggtt 326
             ||||||||||||||| ||| | |||| ||| || ||||| ||||| ||||| || |||||
Sbjct: 92222 catgtcgatcttctccaggctcgtcaggtggccgagctcctccgggaggtcggtcaggtt 92163

                                                                         
Query: 327   aatgcactgcgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaag 386
              ||||||||||| ||||| ||||| || | ||||||||||||||| ||||| | ||| ||
Sbjct: 92162 gatgcactgcgagatgtcgaggtacttgagcctcttcaggctgcacaccgacgctgggag 92103

                                                                         
Query: 387   cttccacagtgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccag 446
             |  ||| || ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 92102 ccgccagagcgccgggcaggcgtagacacggaggatgctcaggcagtgcagcttgcccag 92043

                                                                         
Query: 447   ctcatatggcagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagct 506
             ||| || || ||||| |||||||| |||||||| || | ||||||| | ||||| |||||
Sbjct: 92042 ctcgtagggaagctcggtgaggtcgtggcagttggagatggagatggtctccagcgagct 91983

                                                                         
Query: 507   gatttcacataaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggtt 566
             ||| || || |  || | ||||||||||||||| |||| ||| ||||| || ||||||||
Sbjct: 91982 gatctcgcagatgcttgatggcagctccttcaggtctatgcagtggtcgattgtgaggtt 91923

                                                                         
Query: 567   ggataggcgcggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttca 626
             ||| ||||||||||||||||| || || ||||||||||| ||||| ||| ||| ||||||
Sbjct: 91922 ggagaggcgcggaaacgtcatcgacaggtccatcgttga-tcctcttaggctgctgttca 91864

                                                                         
Query: 627   gctcacaaaggacgagggagatcttgcgtaggttcttcagtgggattgtgcttttcggca 686
             |||| || |||||||||||||||||| | ||||||||||| ||||| ||| | || ||||
Sbjct: 91863 gctcgcagaggacgagggagatcttgtgcaggttcttcagcgggatggtggtctttggca 91804

                     
Query: 687   gtggcggg 694
             | ||||||
Sbjct: 91803 gcggcggg 91796



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>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence
          Length = 103167

 Score =  436 bits (220), Expect = e-119
 Identities = 512/608 (84%), Gaps = 1/608 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    acatcagtctacaagccagtccaggttgtaacactcctctgctacctgcacacgaagatc 146
             |||||||||  | ||||||||||||||||| ||||| || || ||||| || || || ||
Sbjct: 25757 acatcagtccgctagccagtccaggttgtagcactcttcggccacctgaacccggaggtc 25698

                                                                         
Query: 147   cgggatgacctgctcggcttccctccacagcatcgccgtttcctcatcacacacgacgtg 206
              ||||||||||||||||| ||||||||||||| |||||| ||||| || || ||||||||
Sbjct: 25697 agggatgacctgctcggcctccctccacagcagcgccgtctcctcgtcgcatacgacgtg 25638

                                                                         
Query: 207   cccgagggacttcaacgacgaggaggacctcgggaggctcctcaaccgcgagcattcccg 266
              ||||||||||| | |||||| || |||| ||||||||||||||  || ||||| || ||
Sbjct: 25637 gccgagggacttgagcgacgacgacgaccgcgggaggctcctcaggcgggagcactcgcg 25578

                                                                         
Query: 267   catgtcgatcttctctaggtttgtcaagtgaccaagctcttccggaaggtctgtaaggtt 326
             ||||||||||||||| ||| | |||| ||| || ||||| ||||| ||||| || |||||
Sbjct: 25577 catgtcgatcttctccaggctcgtcaggtggccgagctcctccgggaggtcggtcaggtt 25518

                                                                         
Query: 327   aatgcactgcgatatgtccaggtatttcaacctcttcaggctgcataccgaaggtggaag 386
              ||||||||||| ||||| ||||| || | ||||||||||||||| ||||| | ||| ||
Sbjct: 25517 gatgcactgcgagatgtcgaggtacttgagcctcttcaggctgcacaccgacgctgggag 25458

                                                                         
Query: 387   cttccacagtgccgggcaggcgtagacccgcaggatgctcaggcagtgcagcttgcccag 446
             |  ||| || ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 25457 ccgccagagcgccgggcaggcgtagacacggaggatgctcaggcagtgcagcttgcccag 25398

                                                                         
Query: 447   ctcatatggcagctctgtgaggtcatggcagtttgacaaggagatgctttccagagagct 506
             ||| || || ||||| |||||||| |||||||| || | ||||||| | ||||| |||||
Sbjct: 25397 ctcgtagggaagctcggtgaggtcgtggcagttggagatggagatggtctccagcgagct 25338

                                                                         
Query: 507   gatttcacataaactaggtggcagctccttcagatctacgcaatggtcaatggtgaggtt 566
             ||| || || |  || | ||||||||||||||| |||| ||| ||||| || ||||||||
Sbjct: 25337 gatctcgcagatgcttgatggcagctccttcaggtctatgcagtggtcgattgtgaggtt 25278

                                                                         
Query: 567   ggataggcgcggaaacgtcatggagagatccatcgttgattcctcgtagactgttgttca 626
             ||| ||||||||||||||||| || || ||||||||||| ||||| ||| ||| ||||||
Sbjct: 25277 ggagaggcgcggaaacgtcatcgacaggtccatcgttga-tcctcttaggctgctgttca 25219

                                                                         
Query: 627   gctcacaaaggacgagggagatcttgcgtaggttcttcagtgggattgtgcttttcggca 686
             |||| || |||||||||||||||||| | ||||||||||| ||||| ||| | || ||||
Sbjct: 25218 gctcgcagaggacgagggagatcttgtgcaggttcttcagcgggatggtggtctttggca 25159

                     
Query: 687   gtggcggg 694
             | ||||||
Sbjct: 25158 gcggcggg 25151



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>gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, complete sequence
          Length = 176187

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 417    caggatgctcaggcagtgcag 437
              |||||||||||||||||||||
Sbjct: 173096 caggatgctcaggcagtgcag 173116



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>gb|AC004109.1| Homo sapiens PAC clone RP4-608H12 from 7, complete sequence
          Length = 69201

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   caggatgctcaggcagtgcag 437
             |||||||||||||||||||||
Sbjct: 45650 caggatgctcaggcagtgcag 45670



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>gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromosome 7, complete
             sequence
          Length = 219031

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   caggatgctcaggcagtgcag 437
             |||||||||||||||||||||
Sbjct: 42292 caggatgctcaggcagtgcag 42312



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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 498     cagagagctgatttcacataa 518
               |||||||||||||||||||||
Sbjct: 1620218 cagagagctgatttcacataa 1620198



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>gb|AC148409.2| X. tropicalis BAC clone ISB1-267G18 containing gene for frzb2, complete
             sequence
          Length = 69081

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 320   taaggttaatgcactgcgatatgt 343
             ||||||||||| ||||||||||||
Sbjct: 37919 taaggttaatgaactgcgatatgt 37942



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>emb|AL672213.5| Zebrafish DNA sequence from clone BUSM1-73O4 Contains  part of a novel
             gene, a novel gene and part of a novel gene similar to
             STAT (signal transducer and activator of transcription)
             and a novel transposase pseudogene, complete sequence
          Length = 65728

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   tcatggcagtttgacaagga 488
             ||||||||||||||||||||
Sbjct: 54792 tcatggcagtttgacaagga 54773



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>emb|AL596027.11| Zebrafish DNA sequence from clone XX-51F19 in linkage group 19 Contains
             part of novel genes similar to human STAT1 and STAT4
             (signal transduction and activator of transcription) and a
             CpG island, complete sequence
          Length = 72221

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   tcatggcagtttgacaagga 488
             ||||||||||||||||||||
Sbjct: 34391 tcatggcagtttgacaagga 34410



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>emb|AL596024.5| Zebrafish DNA sequence from clone BUSM1-199M19 in linkage group 7
             Contains two novel genes similar to STAT (signal
             transducer and activator of transcription, a novel gene
             and a CpG island, complete sequence
          Length = 51817

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   tcatggcagtttgacaagga 488
             ||||||||||||||||||||
Sbjct: 14130 tcatggcagtttgacaagga 14149



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>gb|BC042991.1| Homo sapiens cDNA clone IMAGE:5296604
          Length = 2641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 456  cagctctgtgaggtcatggc 475
            ||||||||||||||||||||
Sbjct: 1753 cagctctgtgaggtcatggc 1734



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>gb|AC127520.5| Homo sapiens chromosome 15, clone RP11-825M14, complete sequence
          Length = 155382

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    tccagagagctgatttcaca 515
              ||||||||||||||||||||
Sbjct: 116938 tccagagagctgatttcaca 116957



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>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19,
             complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   tcatggcagtttgacaagga 488
             ||||||||||||||||||||
Sbjct: 19154 tcatggcagtttgacaagga 19135



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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     tccgggatgacctgctcggc 164
               ||||||||||||||||||||
Sbjct: 1607103 tccgggatgacctgctcggc 1607122



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gatgacctgctcggcttccc 169
              ||||||||||||||||||||
Sbjct: 480069 gatgacctgctcggcttccc 480088



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>gb|AF226719.1|AF226719 Trichomonas vaginalis chaperonin subunit zeta CCTzeta (Cctz) gene,
           complete cds
          Length = 1754

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 621 tgttcagctcacaaaggacg 640
           ||||||||||||||||||||
Sbjct: 225 tgttcagctcacaaaggacg 244



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     ggatgacctgctcggcttcc 168
               ||||||||||||||||||||
Sbjct: 1604393 ggatgacctgctcggcttcc 1604374



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>emb|AL512791.3|CNS07EFF Human chromosome 14 DNA sequence BAC R-471B22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178834

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    cagctctgtgaggtcatggc 475
              ||||||||||||||||||||
Sbjct: 156914 cagctctgtgaggtcatggc 156933



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>emb|AL672166.8| Zebrafish DNA sequence from clone XX-134G18, complete sequence
          Length = 74692

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   tcatggcagtttgacaagga 488
             ||||||||||||||||||||
Sbjct: 11044 tcatggcagtttgacaagga 11063



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>emb|AL672197.12| Zebrafish DNA sequence from clone XX-102M24 in linkage group 19,
            complete sequence
          Length = 9156

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  tcatggcagtttgacaagga 488
            ||||||||||||||||||||
Sbjct: 4004 tcatggcagtttgacaagga 3985



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>gb|AC006536.2|AC006536 Homo sapiens chromosome 14 clone BAC257P13 map 14q31, complete sequence
          Length = 185402

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    cagctctgtgaggtcatggc 475
              ||||||||||||||||||||
Sbjct: 116265 cagctctgtgaggtcatggc 116284



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>emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1078H9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 228097

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    cagctctgtgaggtcatggc 475
              ||||||||||||||||||||
Sbjct: 159385 cagctctgtgaggtcatggc 159366



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>gb|AC002468.1|AC002468 Human Chromosome 15q26.1 PAC clone pDJ417d7, complete sequence
          Length = 115888

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    tccagagagctgatttcaca 515
              ||||||||||||||||||||
Sbjct: 104620 tccagagagctgatttcaca 104639


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,530,260
Number of Sequences: 3902068
Number of extensions: 5530260
Number of successful extensions: 96565
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96331
Number of HSP's gapped (non-prelim): 222
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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