>RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A)|
          Length = 119

 Score =  105 bits (261), Expect = 2e-22
 Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
 Frame = -3

Query: 585 GVFTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 406
           GV+TFVCR++G EW+AKQH GE+EASAATPY+LQR+LV+AA A D   GVQSSF+MV+P+
Sbjct: 1   GVYTFVCRNNGGEWTAKQHSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVTPS 60

Query: 405 SAIFQV-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDLGFSLFD 232
           SA+FQV V                                         +DD+GFSLFD
Sbjct: 61  SAVFQVIVGAVGGGAMMVSGGGGGGAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLFD 119

>RLA3_ORYSA (P56724) 60S acidic ribosomal protein P3 (P1/P2-like)|
          Length = 118

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -3

Query: 585 GVFTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 406
           GVF+FVC+  G EW+AKQH+G+LEASA++ YDLQR +V  A + D SGGVQSSF++VSP 
Sbjct: 1   GVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRNVVQTALSADSSGGVQSSFSLVSPT 60

Query: 405 SAIFQVV 385
           SA+F VV
Sbjct: 61  SAVFVVV 67

>YIBG_ECOLI (P32106) Hypothetical protein yibG precursor (ORF-A3)|
          Length = 153

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = -3

Query: 579 FTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTM 418
           F+F+C+  GA+   KQ++  + ++A T YDL  + +     + + G  ++SF +
Sbjct: 11  FSFICQLHGADVKIKQNESMMGSTAMT-YDLSEEKLMKLKYKSQHGDSEASFRL 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,338,514
Number of Sequences: 219361
Number of extensions: 733324
Number of successful extensions: 1779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1777
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)