ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9j19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493881.1| Oryza sativa (japonica cultivar-group), predic... 274 4e-70
2dbj|AK071038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 4e-70
3dbj|AK067116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 4e-70
4gb|AY111041.1| Zea mays CL63430_1 mRNA sequence 228 2e-56
5gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
6gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 135 2e-28
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8ref|NM_185166.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-04
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 2e-04
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
11gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 56 2e-04
12dbj|AK104209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
13dbj|AK104151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
14dbj|AK069405.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
15ref|NM_120302.2| Arabidopsis thaliana unknown protein AT5G02240 ... 54 6e-04
16gb|BT000751.1| Arabidopsis thaliana unknown protein (At5g02240) ... 54 6e-04
17gb|AY142045.1| Arabidopsis thaliana At5g02240/T7H20_290 mRNA, co... 54 6e-04
18dbj|AK221714.1| Arabidopsis thaliana mRNA for hypothetical prote... 54 6e-04
19gb|AF410336.1|AF410336 Arabidopsis thaliana AT5g02240/T7H20_290 ... 54 6e-04
20emb|BX830479.1|CNS0A030 Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
21gb|AC161261.5| Mus musculus BAC clone RP23-376D23 from chromosom... 44 0.60
22gb|AF360022.1| Penaeus (Litopenaeus) vannamei microsatellite TUM... 42 2.4
23gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, co... 42 2.4
24gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, com... 42 2.4
25gb|AC144522.12| Homo sapiens 12 BAC RP11-481J8 (Roswell Park Can... 42 2.4
26gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome... 42 2.4
27emb|AL162874.1|ATT1E22 Arabidopsis thaliana DNA chromosome 5, BA... 42 2.4
28emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 42 2.4
29gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome... 42 2.4
30gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosom... 42 2.4
31gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, comple... 42 2.4
32emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chr... 42 2.4
33emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chro... 42 2.4
34emb|AL807779.12| Mouse DNA sequence from clone RP23-82E21 on chr... 42 2.4
35gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome ... 40 9.4
36gb|AC101933.8| Mus musculus chromosome 7, clone RP24-70M5, compl... 40 9.4
37gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
38gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, co... 40 9.4
39gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, compl... 40 9.4
40gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's ... 40 9.4
41gb|AC134904.5| Mus musculus BAC clone RP23-342C18 from chromosom... 40 9.4
42gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, co... 40 9.4
43gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosom... 40 9.4
44gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosom... 40 9.4
45gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosom... 40 9.4
46gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosom... 40 9.4
47emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in ... 40 9.4
48gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome... 40 9.4
49gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, compl... 40 9.4
50emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, com... 40 9.4
51gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, com... 40 9.4
52gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (... 40 9.4
53emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chro... 40 9.4
54emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chro... 40 9.4
55gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 9.4
56emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18... 40 9.4
57emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on ch... 40 9.4
58gb|AE014175.1| Mus musculus piebald deletion region section 3 of... 40 9.4
59gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complet... 40 9.4
60gb|AC110076.4| Homo sapiens BAC clone RP11-309M5 from 4, complet... 40 9.4
61gb|AC129196.5| Mus musculus BAC clone RP24-161C8 from chromosome... 40 9.4
62gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, comp... 40 9.4
63dbj|AK011000.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 40 9.4
64gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, com... 40 9.4
65gb|BC109628.1| Bos taurus cDNA clone IMAGE:8057796 40 9.4
66gb|AC008852.5|AC008852 Homo sapiens chromosome 5 clone CTD-2176I... 40 9.4
67gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cance... 40 9.4
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
69gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, com... 40 9.4
70gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 9.4
71gb|AC123600.18| Mus musculus chromosome 7, clone RP23-62J11, com... 40 9.4
72gb|AC016642.7| Homo sapiens chromosome 5 clone RP11-479O16, comp... 40 9.4
73gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosom... 40 9.4
74gb|AC073909.25| Homo sapiens X BAC RP11-759L5 (Roswell Park Canc... 40 9.4
75gb|AC074367.6| Homo sapiens BAC clone RP11-261A24 from 2, comple... 40 9.4
76dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 9.4
77emb|AL663026.13| Mouse DNA sequence from clone RP23-224M19 on ch... 40 9.4
78dbj|AB013391.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.4
79dbj|AK069923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
80gb|AC121091.10| Mus musculus chromosome 1, clone RP24-191N24, co... 40 9.4
81emb|AL139785.5|CNS01O8B Human chromosome 14 DNA sequence BAC R-1... 40 9.4
82gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230... 40 9.4
83gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.4
84gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, co... 40 9.4
85emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on ch... 40 9.4
86gb|AC102815.31| Mus musculus chromosome 14, clone RP23-55A5, com... 40 9.4
87gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
88gb|BC044777.1| Homo sapiens thioredoxin domain containing 13, mR... 40 9.4
89gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Syst... 40 9.4
90gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosom... 40 9.4
91ref|NM_027374.1| Mus musculus peptidylprolyl isomerase (cyclophi... 40 9.4
92emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 9.4
93emb|AL807762.9| Mouse DNA sequence from clone RP23-48F4 on chrom... 40 9.4
94dbj|AB019146.2| Nasutitermes takasagoensis NtEG gene for cellula... 40 9.4
95dbj|AB032988.1| Homo sapiens mRNA for KIAA1162 protein, partial cds 40 9.4 
>ref|XM_493881.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score =  274 bits (138), Expect = 4e-70
 Identities = 210/234 (89%)
 Strand = Plus / Minus

                                                                       
Query: 455 tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
           ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 828 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 769

                                                                       
Query: 515 caaggcctgtatgcaaacttctgcaacatctgccctggcaacagtttttgtttcagtctt 574
           |||||||||||  |||||||||||||||||||| |||| || |||||||||||| |||||
Sbjct: 768 caaggcctgtaaacaaacttctgcaacatctgctctggtaatagtttttgtttctgtctt 709

                                                                       
Query: 575 caagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatctttgtcttgtag 634
           ||||||||| || ||||| ||||||| |||||| ||||||||||||||||| || |||| 
Sbjct: 708 caagatctcatcatccttcccaacaagcaactcccgcacaccaccatctttatcctgtaa 649

                                                                 
Query: 635 tcctccagctcttataattgtgtatggtacaccagagtccgctaggtactgctc 688
           ||||||||| ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 648 tcctccagcccttataattgtatatggtagacctgagtctgctaggtactgctc 595
to top
>dbj|AK071038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F17, full
           insert sequence
          Length = 1588

 Score =  274 bits (138), Expect = 4e-70
 Identities = 210/234 (89%)
 Strand = Plus / Minus

                                                                       
Query: 455 tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
           ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 892 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 833

                                                                       
Query: 515 caaggcctgtatgcaaacttctgcaacatctgccctggcaacagtttttgtttcagtctt 574
           |||||||||||  |||||||||||||||||||| |||| || |||||||||||| |||||
Sbjct: 832 caaggcctgtaaacaaacttctgcaacatctgctctggtaatagtttttgtttctgtctt 773

                                                                       
Query: 575 caagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatctttgtcttgtag 634
           ||||||||| || ||||| ||||||| |||||| ||||||||||||||||| || |||| 
Sbjct: 772 caagatctcatcatccttcccaacaagcaactcccgcacaccaccatctttatcctgtaa 713

                                                                 
Query: 635 tcctccagctcttataattgtgtatggtacaccagagtccgctaggtactgctc 688
           ||||||||| ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 712 tcctccagcccttataattgtatatggtagacctgagtctgctaggtactgctc 659
to top
>dbj|AK067116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096K17, full
           insert sequence
          Length = 1381

 Score =  274 bits (138), Expect = 4e-70
 Identities = 210/234 (89%)
 Strand = Plus / Minus

                                                                       
Query: 455 tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
           ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 875 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 816

                                                                       
Query: 515 caaggcctgtatgcaaacttctgcaacatctgccctggcaacagtttttgtttcagtctt 574
           |||||||||||  |||||||||||||||||||| |||| || |||||||||||| |||||
Sbjct: 815 caaggcctgtaaacaaacttctgcaacatctgctctggtaatagtttttgtttctgtctt 756

                                                                       
Query: 575 caagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatctttgtcttgtag 634
           ||||||||| || ||||| ||||||| |||||| ||||||||||||||||| || |||| 
Sbjct: 755 caagatctcatcatccttcccaacaagcaactcccgcacaccaccatctttatcctgtaa 696

                                                                 
Query: 635 tcctccagctcttataattgtgtatggtacaccagagtccgctaggtactgctc 688
           ||||||||| ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 695 tcctccagcccttataattgtatatggtagacctgagtctgctaggtactgctc 642
to top
>gb|AY111041.1| Zea mays CL63430_1 mRNA sequence
          Length = 844

 Score =  228 bits (115), Expect = 2e-56
 Identities = 220/255 (86%)
 Strand = Plus / Minus

                                                                       
Query: 436 taaagtctgtcgttggtgttccttcaccttcaggttttgaagccagatcaaacgccttga 495
           |||||||||| ||||| || ||||||||||| |||||||| ||||||||||| ||||| |
Sbjct: 669 taaagtctgtagttggcgtcccttcaccttctggttttgatgccagatcaaatgccttaa 610

                                                                       
Query: 496 actttgcttcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaa 555
           ||||||  || || |||||||| |||||||||||||||||||||||||| |||||||| |
Sbjct: 609 actttgactcttcgaatagcaatgcctgtatgcaaacttctgcaacatcggccctggcta 550

                                                                       
Query: 556 cagtttttgtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacac 615
            |||| ||||||| || |||| |||||| || ||||| |||||||||||||| ||||  |
Sbjct: 549 tagttcttgtttctgttttcaggatctcatcatccttcccaacaatcaactctcgcaagc 490

                                                                       
Query: 616 caccatctttgtcttgtagtcctccagctcttataattgtgtatggtacaccagagtccg 675
           |||||||||| |||||||  || ||||||||||||||||| ||||| | ||| ||||| |
Sbjct: 489 caccatctttatcttgtaaaccgccagctcttataattgtatatggaagaccggagtctg 430

                          
Query: 676 ctaggtactgctctg 690
           |||||||||| ||||
Sbjct: 429 ctaggtactgttctg 415
to top
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                         
Query: 528   caaacttctgcaacatctgccctggcaacagtttttgtttcagtcttcaagatctcgtcg 587
             |||||||||||||||||||| |||| || |||||||||||| |||||||||||||| || 
Sbjct: 39839 caaacttctgcaacatctgctctggtaatagtttttgtttctgtcttcaagatctcatca 39780

                                                                     
Query: 588   tcctttccaacaatcaactcacgcacaccaccatctttgtcttgtagtcctccagc 643
             ||||| ||||||| |||||| ||||||||||||||||| || |||| |||||||||
Sbjct: 39779 tccttcccaacaagcaactcccgcacaccaccatctttatcctgtaatcctccagc 39724



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 455   tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
             ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 40152 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 40093

                      
Query: 515   caaggcctg 523
             |||||||||
Sbjct: 40092 caaggcctg 40084



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 645   cttataattgtgtatggtacaccagagtccgctaggtactgctc 688
             ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 39439 cttataattgtatatggtagacctgagtctgctaggtactgctc 39396
to top
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                          
Query: 528    caaacttctgcaacatctgccctggcaacagtttttgtttcagtcttcaagatctcgtcg 587
              |||||||||||||||||||| |||| || |||||||||||| |||||||||||||| || 
Sbjct: 122238 caaacttctgcaacatctgctctggtaatagtttttgtttctgtcttcaagatctcatca 122179

                                                                      
Query: 588    tcctttccaacaatcaactcacgcacaccaccatctttgtcttgtagtcctccagc 643
              ||||| ||||||| |||||| ||||||||||||||||| || |||| |||||||||
Sbjct: 122178 tccttcccaacaagcaactcccgcacaccaccatctttatcctgtaatcctccagc 122123



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                          
Query: 455    tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
              ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 122551 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 122492

                       
Query: 515    caaggcctg 523
              |||||||||
Sbjct: 122491 caaggcctg 122483



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 645    cttataattgtgtatggtacaccagagtccgctaggtactgctc 688
              ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 121838 cttataattgtatatggtagacctgagtctgctaggtactgctc 121795
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                          
Query: 528    caaacttctgcaacatctgccctggcaacagtttttgtttcagtcttcaagatctcgtcg 587
              |||||||||||||||||||| |||| || |||||||||||| |||||||||||||| || 
Sbjct: 522440 caaacttctgcaacatctgctctggtaatagtttttgtttctgtcttcaagatctcatca 522381

                                                                      
Query: 588    tcctttccaacaatcaactcacgcacaccaccatctttgtcttgtagtcctccagc 643
              ||||| ||||||| |||||| ||||||||||||||||| || |||| |||||||||
Sbjct: 522380 tccttcccaacaagcaactcccgcacaccaccatctttatcctgtaatcctccagc 522325



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                          
Query: 455    tccttcaccttcaggttttgaagccagatcaaacgccttgaactttgcttcctcaaatag 514
              ||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 522753 tccttcaccttcaggttttgatgccagatcaaatgccttaaaccttgcctcctcaaatag 522694

                       
Query: 515    caaggcctg 523
              |||||||||
Sbjct: 522693 caaggcctg 522685



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 645    cttataattgtgtatggtacaccagagtccgctaggtactgctc 688
              ||||||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 522040 cttataattgtatatggtagacctgagtctgctaggtactgctc 521997
to top
>ref|NM_185166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 966

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 462 ccttcaggttttgaagccagatcaaacgccttgaactttg 501
           |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 713 ccttcaggctttgaagccaaatcaaatgccttgaactttg 674
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 462      ccttcaggttttgaagccagatcaaacgccttgaactttg 501
                |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 34222875 ccttcaggctttgaagccaaatcaaatgccttgaactttg 34222914
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 462      ccttcaggttttgaagccagatcaaacgccttgaactttg 501
                |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 34313347 ccttcaggctttgaagccaaatcaaatgccttgaactttg 34313386
to top
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete
              sequence
          Length = 143205

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                      
Query: 462    ccttcaggttttgaagccagatcaaacgccttgaactttg 501
              |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 112123 ccttcaggctttgaagccaaatcaaatgccttgaactttg 112084
to top
>dbj|AK104209.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C03, full
           insert sequence
          Length = 1036

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 462 ccttcaggttttgaagccagatcaaacgccttgaactttg 501
           |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 817 ccttcaggctttgaagccaaatcaaatgccttgaactttg 778
to top
>dbj|AK104151.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-E08, full
           insert sequence
          Length = 1076

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 462 ccttcaggttttgaagccagatcaaacgccttgaactttg 501
           |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 817 ccttcaggctttgaagccaaatcaaatgccttgaactttg 778
to top
>dbj|AK069405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017D04, full
           insert sequence
          Length = 1088

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 462 ccttcaggttttgaagccagatcaaacgccttgaactttg 501
           |||||||| |||||||||| |||||| |||||||||||||
Sbjct: 829 ccttcaggctttgaagccaaatcaaatgccttgaactttg 790
to top
>ref|NM_120302.2| Arabidopsis thaliana unknown protein AT5G02240 mRNA, complete cds
          Length = 1014

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 738 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 679

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 678 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 619

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 618 ttatctagaagtcctccagctctgataattgtgta 584
to top
>gb|BT000751.1| Arabidopsis thaliana unknown protein (At5g02240) mRNA, complete cds
          Length = 950

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 711 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 652

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 651 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 592

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 591 ttatctagaagtcctccagctctgataattgtgta 557
to top
>gb|AY142045.1| Arabidopsis thaliana At5g02240/T7H20_290 mRNA, complete cds
          Length = 762

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 659 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 600

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 599 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 540

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 539 ttatctagaagtcctccagctctgataattgtgta 505
to top
>dbj|AK221714.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL16-87-M17
          Length = 1854

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 661 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 602

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 601 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 542

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 541 ttatctagaagtcctccagctctgataattgtgta 507
to top
>gb|AF410336.1|AF410336 Arabidopsis thaliana AT5g02240/T7H20_290 mRNA, complete cds
          Length = 954

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 738 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 679

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 678 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 619

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 618 ttatctagaagtcctccagctctgataattgtgta 584
to top
>emb|BX830479.1|CNS0A030 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZE09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 885

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 123/155 (79%)
 Strand = Plus / Minus

                                                                       
Query: 504 tcctcaaatagcaaggcctgtatgcaaacttctgcaacatctgccctggcaacagttttt 563
           ||||| || ||||| ||||| ||||| |||||||||||||| |||||||  || ||||| 
Sbjct: 667 tcctcgaacagcaatgcctgaatgcagacttctgcaacatcagccctggggacggttttc 608

                                                                       
Query: 564 gtttcagtcttcaagatctcgtcgtcctttccaacaatcaactcacgcacaccaccatct 623
           || || ||||  |  | ||| ||||| || ||||| | || ||| || ||||| || || 
Sbjct: 607 gtgtctgtctgaagtagctcatcgtctttaccaactagcagctctcgtacaccgccttcc 548

                                              
Query: 624 ttgtcttgtagtcctccagctcttataattgtgta 658
           || ||| | |||||||||||||| |||||||||||
Sbjct: 547 ttatctagaagtcctccagctctgataattgtgta 513
to top
>gb|AC161261.5| Mus musculus BAC clone RP23-376D23 from chromosome 17, complete
             sequence
          Length = 190041

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 30    tctgttttatccctaaaattag 51
             ||||||||||||||||||||||
Sbjct: 75779 tctgttttatccctaaaattag 75758
to top
>gb|AF360022.1| Penaeus (Litopenaeus) vannamei microsatellite TUMXLv5.27 sequence
          Length = 801

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 cccctcctctccctccttctc 238
           |||||||||||||||||||||
Sbjct: 524 cccctcctctccctccttctc 544
to top
>gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, complete sequence
          Length = 184796

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   cacccctcctctccctccttc 236
             |||||||||||||||||||||
Sbjct: 44426 cacccctcctctccctccttc 44446
to top
>gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, complete sequence
          Length = 197426

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 218   cccctcctctccctccttctcaaag 242
             |||||||||||||||||||| ||||
Sbjct: 67729 cccctcctctccctccttctgaaag 67753
to top
>gb|AC144522.12| Homo sapiens 12 BAC RP11-481J8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163515

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    tccccacttcattggccagaa 387
              |||||||||||||||||||||
Sbjct: 119372 tccccacttcattggccagaa 119392
to top
>gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome 8, complete sequence
          Length = 215638

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cccctcctctccctccttctc 238
             |||||||||||||||||||||
Sbjct: 26864 cccctcctctccctccttctc 26844
to top
>emb|AL162874.1|ATT1E22 Arabidopsis thaliana DNA chromosome 5, BAC clone T1E22 (ESSA project)
          Length = 96575

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 520  cctgtatgcaaacttctgcaacatctgccctgg 552
            |||| ||||| |||||||||||||| |||||||
Sbjct: 1718 cctgaatgcagacttctgcaacatcagccctgg 1686
to top
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 520   cctgtatgcaaacttctgcaacatctgccctgg 552
             |||| ||||| |||||||||||||| |||||||
Sbjct: 83783 cctgaatgcagacttctgcaacatcagccctgg 83751
to top
>gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome 12, complete sequence
          Length = 224350

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 219   ccctcctctccctccttctca 239
             |||||||||||||||||||||
Sbjct: 55376 ccctcctctccctccttctca 55396



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aatcaccatggctgtagtta 173
              ||||||||||||||||||||
Sbjct: 141167 aatcaccatggctgtagtta 141186
to top
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete
             sequence
          Length = 196991

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   atcctgtgtcacaatcaccat 162
             |||||||||||||||||||||
Sbjct: 29464 atcctgtgtcacaatcaccat 29444
to top
>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence
          Length = 168447

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   atcctgtgtcacaatcaccat 162
             |||||||||||||||||||||
Sbjct: 72829 atcctgtgtcacaatcaccat 72809
to top
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete
              sequence
          Length = 199355

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    atcctgtgtcacaatcaccat 162
              |||||||||||||||||||||
Sbjct: 131285 atcctgtgtcacaatcaccat 131265
to top
>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete
              sequence
          Length = 202441

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    cccctcctctccctccttctc 238
              |||||||||||||||||||||
Sbjct: 131283 cccctcctctccctccttctc 131303
to top
>emb|AL807779.12| Mouse DNA sequence from clone RP23-82E21 on chromosome X, complete
             sequence
          Length = 202297

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   ttccttcaccttcaggttttg 474
             |||||||||||||||||||||
Sbjct: 67470 ttccttcaccttcaggttttg 67450
to top
>gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome 16, complete sequence
          Length = 207953

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 88053 ccctcctctccctccttctc 88072
to top
>gb|AC101933.8| Mus musculus chromosome 7, clone RP24-70M5, complete sequence
          Length = 205123

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   acacccctcctctccctcct 234
             ||||||||||||||||||||
Sbjct: 81352 acacccctcctctccctcct 81333
to top
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0086N07 map S790A, complete sequence
          Length = 178523

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 464  ttcaggttttgaagccagatcaaa 487
            |||||||||||||| |||||||||
Sbjct: 7782 ttcaggttttgaaggcagatcaaa 7805
to top
>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence
          Length = 188921

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 35070 ccctcctctccctccttctc 35051
to top
>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence
          Length = 233783

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 ccctcctctccctccttctc 238
           ||||||||||||||||||||
Sbjct: 201 ccctcctctccctccttctc 182
to top
>gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 214442

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    atggctgtagttaggaacaa 180
              ||||||||||||||||||||
Sbjct: 124604 atggctgtagttaggaacaa 124623
to top
>gb|AC134904.5| Mus musculus BAC clone RP23-342C18 from chromosome 5, complete sequence
          Length = 198357

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   cctcctctccctccttctca 239
             ||||||||||||||||||||
Sbjct: 13111 cctcctctccctccttctca 13092
to top
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence
          Length = 176607

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    cccctcctctccctccttct 237
              ||||||||||||||||||||
Sbjct: 115582 cccctcctctccctccttct 115601
to top
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence
          Length = 198030

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 147891 ccctcctctccctccttctc 147872
to top
>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence
          Length = 179327

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    cccctcctctccctccttct 237
              ||||||||||||||||||||
Sbjct: 135158 cccctcctctccctccttct 135177
to top
>gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosome 8, complete sequence
          Length = 192510

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 213    agacacccctcctctccctccttc 236
              |||||||||| |||||||||||||
Sbjct: 133278 agacaccccttctctccctccttc 133255
to top
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence
          Length = 205352

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 75484 ccctcctctccctccttctc 75465
to top
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5,
             complete sequence
          Length = 205281

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   cctggcaacagtttttgttt 567
             ||||||||||||||||||||
Sbjct: 56584 cctggcaacagtttttgttt 56603
to top
>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence
          Length = 196947

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   cctcctctccctccttctca 239
             ||||||||||||||||||||
Sbjct: 64525 cctcctctccctccttctca 64544
to top
>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence
          Length = 173805

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cccctcctctccctccttct 237
             ||||||||||||||||||||
Sbjct: 64003 cccctcctctccctccttct 64022
to top
>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acccctcctctccctccttc 236
             ||||||||||||||||||||
Sbjct: 35624 acccctcctctccctccttc 35643
to top
>gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, complete sequence
          Length = 196451

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 40051 ccctcctctccctccttctc 40032
to top
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217
              (CG31217), and ultrabithorax (Ubx) genes, complete cds
          Length = 308092

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    agatcaaacgccttgaactt 499
              ||||||||||||||||||||
Sbjct: 137912 agatcaaacgccttgaactt 137893
to top
>emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chromosome 1 Contains five
              novel genes and a CpG island, complete sequence
          Length = 173031

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 100044 ccctcctctccctccttctc 100063
to top
>emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chromosome 9 Contains the
             gene for a novel protein similar to putative repair and
             recombination helicase RAD26L (LOC56959), a parkinson
             disease 7 (PARK7) pseudogene, the 5' end of a novel gene
             and a CpG island, complete sequence
          Length = 144536

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tgctacttaatagcagtatg 280
             ||||||||||||||||||||
Sbjct: 66975 tgctacttaatagcagtatg 66956
to top
>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete
             sequence
          Length = 165686

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cccctcctctccctccttct 237
             ||||||||||||||||||||
Sbjct: 98204 cccctcctctccctccttct 98185
to top
>emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18 on chromosome 20p12 Contains
            the PHKBP1 pseudogene (phosphorylase kinase, beta
            pseudogene 1), two novel genes and a CpG island, complete
            sequence
          Length = 125729

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 497  ctttgcttcctcaaatagca 516
            ||||||||||||||||||||
Sbjct: 3944 ctttgcttcctcaaatagca 3925
to top
>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains part
              of the gene for a novel protein (likely ortholog to homo
              sapiens FLJ38335), complete sequence
          Length = 198148

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 195981 ccctcctctccctccttctc 195962
to top
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
             sequence
          Length = 404829

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   caaaaacagacttaaagtctgtcg 447
             |||||| |||||||||||||||||
Sbjct: 58757 caaaaagagacttaaagtctgtcg 58734
to top
>gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complete sequence
          Length = 162461

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 25973 ccctcctctccctccttctc 25954
to top
>gb|AC110076.4| Homo sapiens BAC clone RP11-309M5 from 4, complete sequence
          Length = 105211

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   aaaacagacttaaagtctgt 445
             ||||||||||||||||||||
Sbjct: 19014 aaaacagacttaaagtctgt 18995
to top
>gb|AC129196.5| Mus musculus BAC clone RP24-161C8 from chromosome 7, complete sequence
          Length = 156253

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cccctcctctccctccttct 237
             ||||||||||||||||||||
Sbjct: 10850 cccctcctctccctccttct 10869
to top
>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence
          Length = 180302

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    cccctcctctccctccttct 237
              ||||||||||||||||||||
Sbjct: 152713 cccctcctctccctccttct 152694
to top
>dbj|AK011000.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510026K04 product:Ngg1 interacting
           factor 3-like 1 (S. pombe), full insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 ccctcctctccctccttctc 238
           ||||||||||||||||||||
Sbjct: 685 ccctcctctccctccttctc 704
to top
>gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, complete sequence
          Length = 167095

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 23337 ccctcctctccctccttctc 23356
to top
>gb|BC109628.1| Bos taurus cDNA clone IMAGE:8057796
          Length = 915

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 627 tcttgtagtcctccagctct 646
           ||||||||||||||||||||
Sbjct: 273 tcttgtagtcctccagctct 254
to top
>gb|AC008852.5|AC008852 Homo sapiens chromosome 5 clone CTD-2176I21, complete sequence
          Length = 103952

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 507 tcaaatagcaaggcctgtat 526
           ||||||||||||||||||||
Sbjct: 167 tcaaatagcaaggcctgtat 186
to top
>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197909

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 55646 ccctcctctccctccttctc 55665
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 464      ttcaggttttgaagccagatcaaa 487
                |||||||||||||| |||||||||
Sbjct: 13176298 ttcaggttttgaaggcagatcaaa 13176275
to top
>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence
          Length = 212548

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 192372 ccctcctctccctccttctc 192353
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    atggctgtagttaggaacaa 180
              ||||||||||||||||||||
Sbjct: 132279 atggctgtagttaggaacaa 132298
to top
>gb|AC123600.18| Mus musculus chromosome 7, clone RP23-62J11, complete sequence
          Length = 182830

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cccctcctctccctccttct 237
             ||||||||||||||||||||
Sbjct: 78916 cccctcctctccctccttct 78897
to top
>gb|AC016642.7| Homo sapiens chromosome 5 clone RP11-479O16, complete sequence
          Length = 160907

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 507  tcaaatagcaaggcctgtat 526
            ||||||||||||||||||||
Sbjct: 8253 tcaaatagcaaggcctgtat 8234
to top
>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete sequence
          Length = 197884

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 155105 ccctcctctccctccttctc 155124
to top
>gb|AC073909.25| Homo sapiens X BAC RP11-759L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156411

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acccctcctctccctccttc 236
             ||||||||||||||||||||
Sbjct: 60708 acccctcctctccctccttc 60727
to top
>gb|AC074367.6| Homo sapiens BAC clone RP11-261A24 from 2, complete sequence
          Length = 102105

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   cacccctcctctccctccttctca 239
             |||||||||||| |||||||||||
Sbjct: 38317 cacccctcctcttcctccttctca 38340
to top
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 439087 ccctcctctccctccttctc 439106
to top
>emb|AL663026.13| Mouse DNA sequence from clone RP23-224M19 on chromosome X, complete
              sequence
          Length = 237481

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ctcctctccctccttctcaa 240
              ||||||||||||||||||||
Sbjct: 223016 ctcctctccctccttctcaa 223035
to top
>dbj|AB013391.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFO20
          Length = 51737

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   gtttttgtttcagtcttcaa 577
             ||||||||||||||||||||
Sbjct: 32795 gtttttgtttcagtcttcaa 32776
to top
>dbj|AK069923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K08, full
            insert sequence
          Length = 4256

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  taggaacaaaaggcttagtt 191
            ||||||||||||||||||||
Sbjct: 3249 taggaacaaaaggcttagtt 3268
to top
>gb|AC121091.10| Mus musculus chromosome 1, clone RP24-191N24, complete sequence
          Length = 150109

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ccctcctctccctccttctc 238
              ||||||||||||||||||||
Sbjct: 114547 ccctcctctccctccttctc 114528
to top
>emb|AL139785.5|CNS01O8B Human chromosome 14 DNA sequence BAC R-156E22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166343

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    agacacccctcctctccctc 232
              ||||||||||||||||||||
Sbjct: 103130 agacacccctcctctccctc 103149
to top
>gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230-206L9, complete
              sequence
          Length = 215015

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    atggctgtagttaggaacaa 180
              ||||||||||||||||||||
Sbjct: 132279 atggctgtagttaggaacaa 132298
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 369     cccacttcattggccagaatgacc 392
               |||||||||||||||||| |||||
Sbjct: 5342988 cccacttcattggccagattgacc 5342965
to top
>gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, complete sequence
          Length = 217236

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 213    agacacccctcctctccctccttc 236
              |||||||||| |||||||||||||
Sbjct: 170433 agacaccccttctctccctccttc 170456
to top
>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete
             sequence
          Length = 230213

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ccctcctctccctccttctc 238
             ||||||||||||||||||||
Sbjct: 67134 ccctcctctccctccttctc 67115
to top
>gb|AC102815.31| Mus musculus chromosome 14, clone RP23-55A5, complete sequence
          Length = 151802

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 424    caaaaacagacttaaagtctgtcg 447
              |||||| |||||||||||||||||
Sbjct: 118617 caaaaagagacttaaagtctgtcg 118594
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 464      ttcaggttttgaagccagatcaaa 487
                |||||||||||||| |||||||||
Sbjct: 13256477 ttcaggttttgaaggcagatcaaa 13256454
to top
>gb|BC044777.1| Homo sapiens thioredoxin domain containing 13, mRNA (cDNA clone
            IMAGE:4827173)
          Length = 6191

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctttgcttcctcaaatagca 516
            ||||||||||||||||||||
Sbjct: 5874 ctttgcttcctcaaatagca 5893
to top
>gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Systems Human BAC library)
             complete sequence
          Length = 124791

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acccctcctctccctccttc 236
             ||||||||||||||||||||
Sbjct: 97898 acccctcctctccctccttc 97917
to top
>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   cagtccacagacacccctcc 224
             ||||||||||||||||||||
Sbjct: 81221 cagtccacagacacccctcc 81202
to top
>ref|NM_027374.1| Mus musculus peptidylprolyl isomerase (cyclophilin)-like 3 (Ppil3),
           transcript variant 2, mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 ccctcctctccctccttctc 238
           ||||||||||||||||||||
Sbjct: 685 ccctcctctccctccttctc 704
to top
>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cacccctcctctccctcctt 235
              ||||||||||||||||||||
Sbjct: 164785 cacccctcctctccctcctt 164804
to top
>emb|AL807762.9| Mouse DNA sequence from clone RP23-48F4 on chromosome 4, complete
              sequence
          Length = 264321

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    cctcctctccctccttctca 239
              ||||||||||||||||||||
Sbjct: 103689 cctcctctccctccttctca 103708
to top
>dbj|AB019146.2| Nasutitermes takasagoensis NtEG gene for cellulase NtEG, complete cds
          Length = 13005

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tcagatatgacagtttcttt 79
             ||||||||||||||||||||
Sbjct: 11138 tcagatatgacagtttcttt 11157
to top
>dbj|AB032988.1| Homo sapiens mRNA for KIAA1162 protein, partial cds
          Length = 5224

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctttgcttcctcaaatagca 516
            ||||||||||||||||||||
Sbjct: 4959 ctttgcttcctcaaatagca 4978


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,709,674
Number of Sequences: 3902068
Number of extensions: 6709674
Number of successful extensions: 136956
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136460
Number of HSP's gapped (non-prelim): 496
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top