ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9l15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016848.1| Zea mays clone Contig681 mRNA sequence Length = 855 Score = 668 bits (337), Expect = 0.0 Identities = 483/529 (91%), Gaps = 2/529 (0%) Strand = Plus / Plus Query: 167 tttcagtcctctttgaacagctcacggccaattatcattcttctgatctcactagtacca 226 ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| Sbjct: 163 tttcagtcctctttgaagagctcacggccaattatcattcttcttacctcactagtacca 222 Query: 227 gccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatg 286 || |||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 223 gcaccaatctcaaacaattttgcatctctcaggagacgaccagttgggtactcatttatg 282 Query: 287 tatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgcccttttcagc 346 || ||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 283 tacccatttccaccaagacactggattgcctgaagtgcaacttgggttgca-ttttcagc 341 Query: 347 agcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtccct 406 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 342 agcaaagagaattactcctgcacaatccttgcgatcaactttgccattatcgcagtccct 401 Query: 407 agcaactgagtatacaaatgatcttgatgattgcaaggaggtgtacatgtctgccatttt 466 |||||| |||||||||||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 402 agcaaccgagtatacaaatgatcttgacgactgcaacgaggtgtacatatcggccatttt 461 Query: 467 cccctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacata 526 |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 462 cccctgtatgaactgaaattcaccaattggacggccgaattgctccctctggcgaacata 521 Query: 527 aggaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaag 586 ||||| ||| ||||||||||||||||||| || |||||||| ||| ||||||||||||| Sbjct: 522 tggaagtacagcatcaaggcatgcctgcataaggccaatagggcccgcagctaatacaag 581 Query: 587 tctttccagatcaagaccagacatcatgacataaacaccttttccttcttcaccaagaac 646 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| || || Sbjct: 582 cctttccagatcaagccctgacatcatgacataaacacctttgccttcttcaccgaggac 641 Query: 647 attctctcgaggcacaaaagcagttctcaaagacaagctcacatgtgtc 695 ||| || | ||||| ||||||||||||||| ||||||||||| ||||| Sbjct: 642 attttcgcatggcac-aaagcagttctcaaaaacaagctcacacgtgtc 689
>gb|BT009337.1| Triticum aestivum clone wlm4.pk0012.g12:fis, full insert mRNA sequence Length = 1412 Score = 640 bits (323), Expect = e-180 Identities = 407/431 (94%), Gaps = 3/431 (0%) Strand = Plus / Minus Query: 1 gattgaactttatttgca-gaatgttgggcatatacaaaggtatgagaaggattggatag 59 |||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 437 gattgagctttatttgcaagaatgttggacatatacaaaagtatgagaaggattggatag 378 Query: 60 aacatcatcaaacatttgaacacccgggaccgttcactaatggtctaaatcctgctcacc 119 ||||||||||| |||| ||||| | ||||| ||| ||||||||||||||||||||||||| Sbjct: 377 aacatcatcaagcatt-gaacatcagggacagttgactaatggtctaaatcctgctcacc 319 Query: 120 tcctccagttagaatatgcactgataagatggcttccagaagaataatttcagtcctctt 179 ||||| |||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 318 tcctcaagttagaacatgcactgacaagctggcttccagaagaataatctcagtcctctt 259 Query: 180 tgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaatctcga 239 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 258 taaacagctcacggccaattatcattcttctgatctcactagtacccgccccaatctcga 199 Query: 240 acagttttgcatctctcagtagacgcccagttgggtactcatttatgtatccattgccac 299 ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 198 acagttttgcatccctcaggagacggccagttgggtactcatttatgtatccattgccac 139 Query: 300 caagacactggattgcctcaagtgcaacttgtgttgcccttttcagcagcaaagaggatt 359 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138 caagacactggattgcctcaagtgcaacttgtgttgccc-tttcagcagcaaagaggatc 80 Query: 360 actcctgcacaatccttgcgatcaactttgccattatcacagtccctagcaactgagtat 419 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 79 actcctgcacaatccttacggtcaactttgccattatcacagtccctagcaactgagtat 20 Query: 420 acaaatgatct 430 ||||||||||| Sbjct: 19 acaaatgatct 9
>gb|AY107381.1| Zea mays PCO061330 mRNA sequence Length = 1531 Score = 636 bits (321), Expect = e-179 Identities = 479/529 (90%), Gaps = 2/529 (0%) Strand = Plus / Minus Query: 167 tttcagtcctctttgaacagctcacggccaattatcattcttctgatctcactagtacca 226 ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| Sbjct: 1320 tttcagtcctctttgaagagctcacggccaattatcattcttcttacctcactagtaccg 1261 Query: 227 gccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatg 286 || |||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1260 gcaccaatctcaaacaattttgcatctctcaggagacgaccagttgggtactcatttatg 1201 Query: 287 tatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgcccttttcagc 346 || ||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 1200 tacccatttccaccaagacactggattgcctgaagtgcaacttgggttgca-ttttcagc 1142 Query: 347 agcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtccct 406 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1141 agcaaagagaattactcctgcacaatccttgcgatcaactttgccattatcgcagtccct 1082 Query: 407 agcaactgagtatacaaatgatcttgatgattgcaaggaggtgtacatgtctgccatttt 466 |||||||||||| |||||||||||||| || ||||| || |||||||| || |||||||| Sbjct: 1081 agcaactgagtacacaaatgatcttgacgactgcaacgaagtgtacatatcagccatttt 1022 Query: 467 cccctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacata 526 |||||||| ||||||||||||| ||| ||||| |||||||||||||||| |||||||| Sbjct: 1021 cccctgtatgaactgaaattcaacaaatggacgggcgaattgctccctctggcgaacata 962 Query: 527 aggaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaag 586 ||||| ||||||||||||||||||||||| || |||||||| ||| ||||||||||||| Sbjct: 961 tggaagtacaacatcaaggcatgcctgcataaggccaatagggcccgcagctaatacaag 902 Query: 587 tctttccagatcaagaccagacatcatgacataaacaccttttccttcttcaccaagaac 646 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| || || Sbjct: 901 cctttccagatcaagccctgacatcatgacataaacacctttgccttcttcaccgaggac 842 Query: 647 attctctcgaggcacaaaagcagttctcaaagacaagctcacatgtgtc 695 ||| || | ||||| ||||||||||||||| ||||||||||| ||||| Sbjct: 841 attttcgcatggcac-aaagcagttctcaaaaacaagctcacacgtgtc 794
>gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence Length = 942 Score = 607 bits (306), Expect = e-170 Identities = 477/530 (90%), Gaps = 3/530 (0%) Strand = Plus / Minus Query: 167 tttcagtcctctttgaacagctcacggccaattatcattct-tctgatctcactagtacc 225 |||||||||| |||||| ||||||||||||||||||||| | | | ||||| || | ||| Sbjct: 741 tttcagtcctttttgaagagctcacggccaattatcattgtgtgttatctcgcttggacc 682 Query: 226 agccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttat 285 |||||||||||| |||| |||||||| | | || ||||| |||| ||||||||||||||| Sbjct: 681 agccccaatctcaaacaattttgcatttttgaggagacgaccagctgggtactcatttat 622 Query: 286 gtatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgcccttttcag 345 ||| ||||| ||||||||||| ||||| |||| |||||| ||||| ||||| ||||||| Sbjct: 621 gtacccatttccaccaagacagtggatcgcctgaagtgccacttgggttgca-ttttcag 563 Query: 346 cagcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtccc 405 |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 cagcaaagagaattacccctgcacaatccttgcgatcaactttgccattatcgcagtccc 503 Query: 406 tagcaactgagtatacaaatgatcttgatgattgcaaggaggtgtacatgtctgccattt 465 ||||| | ||||||||||||||||||||||| ||||| ||||||||||| || ||||||| Sbjct: 502 tagcagccgagtatacaaatgatcttgatgactgcaatgaggtgtacatatcagccattt 443 Query: 466 tcccctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacat 525 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 442 tcccctgtatgaactgaaattcaccaattggacgcccgaattgctccctctgtcgaacat 383 Query: 526 aaggaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaa 585 | ||||| ||||||||||||||||||||||| || |||||||| ||| |||||||||||| Sbjct: 382 atggaagtacaacatcaaggcatgcctgcataaggccaatagggcccgcagctaatacaa 323 Query: 586 gtctttccagatcaagaccagacatcatgacataaacaccttttccttcttcaccaagaa 645 | |||||||||||||| || ||||||||||||||||||||||| ||||||||||| || | Sbjct: 322 gcctttccagatcaagccctgacatcatgacataaacacctttgccttcttcaccgagga 263 Query: 646 cattctctcgaggcacaaaagcagttctcaaagacaagctcacatgtgtc 695 ||||||| || ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 262 cattctcgcgtggcac-aaagcagttctcaaaaacaagctcacatgtgtc 214
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 569 bits (287), Expect = e-159 Identities = 487/551 (88%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 149 tggcttccagaagaataatttcagtcctctttgaacagctcacggccaattatcattctt 208 ||||||||| || |||| ||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 1513 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1454 Query: 209 ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 268 || |||||||||||||| || |||||||| |||||||||||||||||||| | || ||| Sbjct: 1453 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1394 Query: 269 gttgggtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaact 328 ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 1393 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcctgaagtgcaacc 1334 Query: 329 tgtgttgcccttttcagcagcaaagaggattactcctgcacaatccttgcgatcaacttt 388 || |||||||||| ||||||||||||| || || || |||||||||||||| |||||||| Sbjct: 1333 tgggttgcccttt-cagcagcaaagagaatcacaccagcacaatccttgcggtcaacttt 1275 Query: 389 gccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgcaaggaggt 448 ||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 1274 accattgtcacagtccctagcaaccgagtaaacaaatgaccttgatgactgcaaggaggt 1215 Query: 449 gtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgcccgaattg 508 |||||| ||||||| ||||||||||| |||||||||||||||||| ||||| || ||||| Sbjct: 1214 gtacatatctgccaatttcccctgtatgaactgaaattcaccaattggacggccaaattg 1155 Query: 509 ctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagcccaatagg 568 ||| || || ||||||||||||| | | |||||||||||||| |||||||| || ||||| Sbjct: 1154 ctctctttggcgaacataaggaacagctacatcaaggcatgcttgcatgaggccgatagg 1095 Query: 569 acccccagctaatacaagtctttccagatcaagaccagacatcatgacataaacaccttt 628 ||| ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 1094 acctgcagctaacacaagtctttctagatcaagccctgacatcatgacataaacaccttt 1035 Query: 629 tccttcttcaccaagaacattctctcgaggcacaaaagcagttctcaaagacaagctcac 688 |||||||| || ||||| || || | ||||||||| || ||||| || |||||||||| Sbjct: 1034 cccttcttccccgagaacgttttcatggggcacaaaa-caattctcgaacacaagctcac 976 Query: 689 atgtgtcactt 699 ||||||||||| Sbjct: 975 atgtgtcactt 965
>dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064C04, full insert sequence Length = 1500 Score = 569 bits (287), Expect = e-159 Identities = 487/551 (88%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 149 tggcttccagaagaataatttcagtcctctttgaacagctcacggccaattatcattctt 208 ||||||||| || |||| ||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 1350 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1291 Query: 209 ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 268 || |||||||||||||| || |||||||| |||||||||||||||||||| | || ||| Sbjct: 1290 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1231 Query: 269 gttgggtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaact 328 ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 1230 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcctgaagtgcaacc 1171 Query: 329 tgtgttgcccttttcagcagcaaagaggattactcctgcacaatccttgcgatcaacttt 388 || |||||||||| ||||||||||||| || || || |||||||||||||| |||||||| Sbjct: 1170 tgggttgcccttt-cagcagcaaagagaatcacaccagcacaatccttgcggtcaacttt 1112 Query: 389 gccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgcaaggaggt 448 ||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 1111 accattgtcacagtccctagcaaccgagtaaacaaatgaccttgatgactgcaaggaggt 1052 Query: 449 gtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgcccgaattg 508 |||||| ||||||| ||||||||||| |||||||||||||||||| ||||| || ||||| Sbjct: 1051 gtacatatctgccaatttcccctgtatgaactgaaattcaccaattggacggccaaattg 992 Query: 509 ctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagcccaatagg 568 ||| || || ||||||||||||| | | |||||||||||||| |||||||| || ||||| Sbjct: 991 ctctctttggcgaacataaggaacagctacatcaaggcatgcttgcatgaggccgatagg 932 Query: 569 acccccagctaatacaagtctttccagatcaagaccagacatcatgacataaacaccttt 628 ||| ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 931 acctgcagctaacacaagtctttctagatcaagccctgacatcatgacataaacaccttt 872 Query: 629 tccttcttcaccaagaacattctctcgaggcacaaaagcagttctcaaagacaagctcac 688 |||||||| || ||||| || || | ||||||||| || ||||| || |||||||||| Sbjct: 871 cccttcttccccgagaacgttttcatggggcacaaaa-caattctcgaacacaagctcac 813 Query: 689 atgtgtcactt 699 ||||||||||| Sbjct: 812 atgtgtcactt 802
>ref|XM_475553.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 553 bits (279), Expect = e-154 Identities = 467/527 (88%), Gaps = 2/527 (0%) Strand = Plus / Minus Query: 173 tcctctttgaacagctcacggccaattatcattcttctgatctcactagtaccagcccca 232 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1226 tcctctttgaagagctcgcggccaattatcattcttcttatctcactagtaccggctcca 1167 Query: 233 atctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatgtatcca 292 ||||| |||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 1166 atctcaaacagttttgcatctctcagcaatcggccagttgggtactcatttatgtatccg 1107 Query: 293 ttgccaccaagacactggattgcctcaagtgcaacttgtgttgcccttttcagcagcaaa 352 ||||||||||||||||| ||||||| ||||||||| || |||||||||| |||||||||| Sbjct: 1106 ttgccaccaagacactgtattgcctgaagtgcaacctgggttgcccttt-cagcagcaaa 1048 Query: 353 gaggattactcctgcacaatccttgcgatcaactttgccattatcacagtccctagcaac 412 ||| || || || |||||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 1047 gagaatcacaccagcacaatccttgcggtcaactttaccattgtcacagtccctagcaac 988 Query: 413 tgagtatacaaatgatcttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| |||||||| |||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 987 cgagtaaacaaatgaccttgatgactgcaaggaggtgtacatatctgccaatttcccctg 928 Query: 473 taagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataaggaag 532 || |||||||||||||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 927 tatgaactgaaattcaccaattggacggccaaattgctctctttggcgaacataaggaac 868 Query: 533 aacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtctttc 592 | | |||||||||||||| |||||||| || |||||||| ||||||| ||||||||||| Sbjct: 867 agctacatcaaggcatgcttgcatgaggccgataggacctgcagctaacacaagtctttc 808 Query: 593 cagatcaagaccagacatcatgacataaacaccttttccttcttcaccaagaacattctc 652 |||||||| || ||||||||||||||||||||||| |||||||| || ||||| || || Sbjct: 807 tagatcaagccctgacatcatgacataaacacctttcccttcttccccgagaacgttttc 748 Query: 653 tcgaggcacaaaagcagttctcaaagacaagctcacatgtgtcactt 699 | ||||||||| || ||||| || ||||||||||||||||||||| Sbjct: 747 atggggcacaaaa-caattctcgaacacaagctcacatgtgtcactt 702
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 149 tggcttccagaagaataatttcagtcctctttgaacagctcacggccaattatcattctt 208 ||||||||| || |||| ||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 71462 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 71521 Query: 209 ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 268 || |||||||||||||| || |||||||| |||||||||||||||||||| | || ||| Sbjct: 71522 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 71581 Query: 269 gttgggtactcatttatgtatccattgccaccaagacactggattgcct 317 ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71582 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 71630 Score = 163 bits (82), Expect = 1e-36 Identities = 139/158 (87%) Strand = Plus / Plus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataag 528 |||||| |||||||||||||||||| ||||| || |||||||| || || |||||||||| Sbjct: 72712 cctgtatgaactgaaattcaccaattggacggccaaattgctctctttggcgaacataag 72771 Query: 529 gaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtc 588 ||| | | |||||||||||||| |||||||| || |||||||| ||||||| ||||||| Sbjct: 72772 gaacagctacatcaaggcatgcttgcatgaggccgataggacctgcagctaacacaagtc 72831 Query: 589 tttccagatcaagaccagacatcatgacataaacacct 626 |||| |||||||| || ||||||||||||||||||||| Sbjct: 72832 tttctagatcaagccctgacatcatgacataaacacct 72869 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 427 ||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 72435 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 72489 Score = 63.9 bits (32), Expect = 7e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 |||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 72564 cttgatgactgcaaggaggtgtacatatctgccaatttcccctg 72607 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 ||||||||| || |||||||||| ||||||||||||| || || || |||||||||| Sbjct: 71969 aagtgcaacctgggttgcccttt-cagcagcaaagagaatcacaccagcacaatcct 72024
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 149 tggcttccagaagaataatttcagtcctctttgaacagctcacggccaattatcattctt 208 ||||||||| || |||| ||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 1409800 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1409859 Query: 209 ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 268 || |||||||||||||| || |||||||| |||||||||||||||||||| | || ||| Sbjct: 1409860 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1409919 Query: 269 gttgggtactcatttatgtatccattgccaccaagacactggattgcct 317 ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1409920 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 1409968 Score = 163 bits (82), Expect = 1e-36 Identities = 139/158 (87%) Strand = Plus / Plus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataag 528 |||||| |||||||||||||||||| ||||| || |||||||| || || |||||||||| Sbjct: 1411050 cctgtatgaactgaaattcaccaattggacggccaaattgctctctttggcgaacataag 1411109 Query: 529 gaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtc 588 ||| | | |||||||||||||| |||||||| || |||||||| ||||||| ||||||| Sbjct: 1411110 gaacagctacatcaaggcatgcttgcatgaggccgataggacctgcagctaacacaagtc 1411169 Query: 589 tttccagatcaagaccagacatcatgacataaacacct 626 |||| |||||||| || ||||||||||||||||||||| Sbjct: 1411170 tttctagatcaagccctgacatcatgacataaacacct 1411207 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 427 ||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1410773 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 1410827 Score = 63.9 bits (32), Expect = 7e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 |||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 1410902 cttgatgactgcaaggaggtgtacatatctgccaatttcccctg 1410945 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 ||||||||| || |||||||||| ||||||||||||| || || || |||||||||| Sbjct: 1410307 aagtgcaacctgggttgcccttt-cagcagcaaagagaatcacaccagcacaatcct 1410362
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 149 tggcttccagaagaataatttcagtcctctttgaacagctcacggccaattatcattctt 208 ||||||||| || |||| ||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 3880 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 3939 Query: 209 ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 268 || |||||||||||||| || |||||||| |||||||||||||||||||| | || ||| Sbjct: 3940 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 3999 Query: 269 gttgggtactcatttatgtatccattgccaccaagacactggattgcct 317 ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 4000 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 4048 Score = 163 bits (82), Expect = 1e-36 Identities = 139/158 (87%) Strand = Plus / Plus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataag 528 |||||| |||||||||||||||||| ||||| || |||||||| || || |||||||||| Sbjct: 5130 cctgtatgaactgaaattcaccaattggacggccaaattgctctctttggcgaacataag 5189 Query: 529 gaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtc 588 ||| | | |||||||||||||| |||||||| || |||||||| ||||||| ||||||| Sbjct: 5190 gaacagctacatcaaggcatgcttgcatgaggccgataggacctgcagctaacacaagtc 5249 Query: 589 tttccagatcaagaccagacatcatgacataaacacct 626 |||| |||||||| || ||||||||||||||||||||| Sbjct: 5250 tttctagatcaagccctgacatcatgacataaacacct 5287 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 427 ||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 4853 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 4907 Score = 63.9 bits (32), Expect = 7e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 |||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 4982 cttgatgactgcaaggaggtgtacatatctgccaatttcccctg 5025 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 ||||||||| || |||||||||| ||||||||||||| || || || |||||||||| Sbjct: 4387 aagtgcaacctgggttgcccttt-cagcagcaaagagaatcacaccagcacaatcct 4442
>emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isovaleryl-CoA dehydrogenase (ivd2 gene) Length = 1415 Score = 190 bits (96), Expect = 4e-45 Identities = 410/512 (80%), Gaps = 2/512 (0%) Strand = Plus / Minus Query: 188 tcacggccaattatcattcttctgatctcactagtaccagccccaatctcgaacagtttt 247 |||||||| ||||||||||||||||||||||| || || || |||||||| | ||||| Sbjct: 1187 tcacggcctattatcattcttctgatctcacttgtgcctgcaccaatctcatatagtttg 1128 Query: 248 gcatctctcagtagacgcccagttgggtactcatttatgtatccattgccaccaagacac 307 ||||||| || | ||| ||||| ||||||||||| | ||| |||||||| || || ||| Sbjct: 1127 gcatctcggagaaaacgtccagtcgggtactcattcacgtagccattgcctccgaggcac 1068 Query: 308 tggattgcctcaagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgc 367 || || |||| ||| |||||||| ||||| | ||||||||||| |||| || || || || Sbjct: 1067 tgaatagcctgaagagcaacttgggttgctc-tttcagcagcagagagtataacaccagc 1009 Query: 368 acaatccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 427 |||||||||| || || | ||| | ||||| ||||| || || || || | | | || Sbjct: 1008 acaatccttggtattaatcgtcccactgtcacattcccttgcgacagaatagagatacga 949 Query: 428 tcttgatgattgcaaggaggtgtacatgtctgccattttcccctgtaagaactgaaattc 487 |||||| ||||||| || ||||||||||| |||| ||| ||||||| || |||||||| Sbjct: 948 tcttgaagattgcatagatgtgtacatgtcagccacttttccctgtacaaattgaaattc 889 Query: 488 accaatcggacgcccgaattgctccctctgtcgaacataaggaagaacaacatcaaggca 547 |||||||| ||||| ||||| |||| ||| |||||| || |||||||||||||| || Sbjct: 888 tccaatcggtcgcccaaattgttcccgttgtttaacataggggagaacaacatcaagaca 829 Query: 548 tgcctgcatgagcccaataggacccccagctaatacaagtctttccagatcaagaccaga 607 || ||||| | |||| ||||| || || || |||||||||||||| || || || Sbjct: 828 agcttgcataattccaacgggaccagatgccaaaacgagtctttccagatcgagccccga 769 Query: 608 catcatgacataaacaccttttccttcttcaccaagaacattctctcgaggcacaaaagc 667 ||||| ||||||||| ||||||||| ||| || |||||||| ||| ||| || ||| | Sbjct: 768 catcaggacataaactccttttcctacttgccccagaacattttcttcaggaacgaaa-c 710 Query: 668 agttctcaaagacaagctcacatgtgtcactt 699 |||||||||| ||||||||||||||||||||| Sbjct: 709 agttctcaaacacaagctcacatgtgtcactt 678
>emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA dehydrogenase/auxin binding protein (abp44/ivdh gene) Length = 1559 Score = 103 bits (52), Expect = 8e-19 Identities = 269/340 (79%), Gaps = 1/340 (0%) Strand = Plus / Minus Query: 360 actcctgcacaatccttgcgatcaactttgccattatcacagtccctagcaactgagtat 419 ||||| ||||||||||| | |||||||| || ||||||||||||| ||| || || || Sbjct: 1141 actccagcacaatccttcgggtcaacttttccgttatcacagtcccgagctacagaatac 1082 Query: 420 acaaatgatcttgatgattgcaaggaggtgtacatgtctgccattttcccctgtaagaac 479 || | || ||||| || || || || || |||||||||| | ||| ||||| | |||| Sbjct: 1081 acgtaagaccttgaggactgtaaagacgtaaacatgtctgcaacttttccctggatgaac 1022 Query: 480 tgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataaggaagaacaaca 539 ||||| || ||||| ||| | || || ||||| | |||||| ||||||||| |||||| Sbjct: 1021 tgaaactctccaataggatgaccaaactgctctcgttgtcgagtataaggaaggacaaca 962 Query: 540 tcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtctttccagatca 599 || || ||||||||||| | |||| ||||| || | ||| ||||| ||||||| ||| Sbjct: 961 tcgagacatgcctgcataataccaaggggaccacctgataaaacaagcctttccaaatcc 902 Query: 600 agaccagacatcatgacataaacaccttttccttcttcaccaagaacattctctcgaggc 659 | || |||||||||||||| || ||||||||||||| ||||||||||| || || Sbjct: 901 aaccccgacatcatgacatagactccttttccttctttcccaagaacattttcgtctgga 842 Query: 660 acaaaagcagttctcaaagacaagctcacatgtgtcactt 699 || |||||| ||||| ||||||||||||||||| |||||| Sbjct: 841 ac-aaagcaattctcgaagacaagctcacatgtatcactt 803 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 179 ttgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaatctcg 238 ||||| ||||| || || || ||||||||||||||||||||||| || || || |||||| Sbjct: 1321 ttgaagagctcgcgtcctataatcattcttctgatctcactagttccggctccgatctcg 1262 Query: 239 aacagttttgcatctct 255 | ||||| |||||||| Sbjct: 1261 taaagtttagcatctct 1245
>ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDROGENASE) AT3G45300 (IVD) mRNA, complete cds Length = 2014 Score = 99.6 bits (50), Expect = 1e-17 Identities = 203/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1219 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 1160 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 1159 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 1100 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||||||| || |||||||||||||||| | Sbjct: 1099 ccaaattgttctctctggcgaatatagggaagaacattgtcgaggcatgcctgcatgatc 1040 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 1039 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 980 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 979 actccttttccttc 966
>emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydrogenase Length = 1321 Score = 99.6 bits (50), Expect = 1e-17 Identities = 203/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1069 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 1010 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 1009 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 950 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||||||| || |||||||||||||||| | Sbjct: 949 ccaaattgttctctctggcgaatatagggaagaacattgtcgaggcatgcctgcatgatc 890 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 889 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 830 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 829 actccttttccttc 816
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence Length = 161536 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 477 aactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataaggaagaaca 536 |||||||| || ||||| ||||| || || ||||| || ||||||||||||||||| ||| Sbjct: 13432 aactgaaactccccaataggacgaccaaactgctctctttgtcgaacataaggaaggaca 13491 Query: 537 acatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtctttccaga 596 |||||||| |||| |||||| | |||| ||||| | ||||| ||||| ||||||| | Sbjct: 13492 acatcaagacatgactgcataataccaaggggaccggctgctaaaacaagcctttccaaa 13551 Query: 597 tcaagaccagacatcatgacata 619 || || ||||||||||||||||| Sbjct: 13552 tccagcccagacatcatgacata 13574 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 194 ccaattatcattcttctgatctcactagtaccagccccaatctcgaacagttttgcatct 253 ||||| |||||||||||||||||||| || || ||||| |||||| | ||||| |||||| Sbjct: 11870 ccaataatcattcttctgatctcacttgttccggccccgatctcgtagagtttcgcatct 11929 Query: 254 ctcagtagacgcccagttgggtactc 279 || || ||||| || ||||| ||||| Sbjct: 11930 ctaaggagacgaccggttggatactc 11955 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 663 aaagcagttctcaaagacaagctcacat 690 |||||| ||||||||||| ||||||||| Sbjct: 14250 aaagcaattctcaaagactagctcacat 14277
>gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor IVD (At3g45300) mRNA, complete cds Length = 1416 Score = 91.7 bits (46), Expect = 3e-15 Identities = 202/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1019 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 960 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 959 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 900 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||||||| || ||||||||||||| || | Sbjct: 899 ccaaattgttctctctggcgaatatagggaagaacattgtcgaggcatgcctgcacgatc 840 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 839 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 780 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 779 actccttttccttc 766
>gb|DQ427127.1| Sorghum propinquum locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427126.1| Sorghum bicolor voucher PI585454 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427125.1| Sorghum bicolor voucher PI267539 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427124.1| Sorghum bicolor voucher PI267408 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427123.1| Sorghum bicolor voucher PI221607 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427122.1| Sorghum bicolor voucher PI152702 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427121.1| Sorghum bicolor voucher NSL92371 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427120.1| Sorghum bicolor voucher NSL87666 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427119.1| Sorghum bicolor voucher NSL77217 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427118.1| Sorghum bicolor voucher NSL77034 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427117.1| Sorghum bicolor voucher NSL56174 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427116.1| Sorghum bicolor voucher NSL56003 locus CDO0580 genomic sequence Length = 676 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427115.1| Sorghum bicolor voucher NSL55243 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427114.1| Sorghum bicolor voucher NSL51365 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427113.1| Sorghum bicolor voucher NSL51030 locus CDO0580 genomic sequence Length = 677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 533 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 478 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427112.1| Sorghum bicolor voucher NSL50875 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|DQ427111.1| Sorghum bicolor voucher BTx623 locus CDO0580 genomic sequence Length = 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 373 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 430 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264 Score = 73.8 bits (37), Expect = 7e-10 Identities = 53/57 (92%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 319 aagtgcaacttgtgttgcccttttcagcagcaaagaggattactcctgcacaatcct 375 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 535 aagtgcaacttgggttgca-ttttcagcagcaaagagaattactcctgcacaatcct 480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 469 cctgtaagaactgaaattcaccaatcggacgcccgaattgctccct 514 |||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 46 cctgtatgaactgaaattcaccaattggacggccgaattgctccct 1 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 429 cttgatgattgcaaggaggtgtacatgtctgccattttcccctg 472 ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 194 cttgacgactgcaatgaggtgtacatatcagccattttcccctg 151
>gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD) (F18N11.6) mRNA, complete cds Length = 1477 Score = 91.7 bits (46), Expect = 3e-15 Identities = 202/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1049 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 990 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 989 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 930 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||||||| || ||||||||||||| || | Sbjct: 929 ccaaattgttctctctggcgaatatagggaagaacattgtcgaggcatgcctgcacgatc 870 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 869 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 810 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 809 actccttttccttc 796
>gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1547 Score = 91.7 bits (46), Expect = 3e-15 Identities = 202/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1231 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 1172 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 1171 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 1112 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||| ||| || |||||||||||||||| | Sbjct: 1111 ccaaattgttctctctggcgaatatagggaagtacattgtcgaggcatgcctgcatgatc 1052 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 1051 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 992 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 991 actccttttccttc 978
>gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete sequence Length = 1514 Score = 91.7 bits (46), Expect = 3e-15 Identities = 202/254 (79%) Strand = Plus / Minus Query: 381 tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgc 440 |||||||| ||||| ||||||||||| ||||| ||||| || |||| ||||| ||||| Sbjct: 1145 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattgt 1086 Query: 441 aaggaggtgtacatgtctgccattttcccctgtaagaactgaaattcaccaatcggacgc 500 || | |||||||| || || | ||| ||||||| ||||||||||| |||| ||||| Sbjct: 1085 aatgcagtgtacatatcagcaactttaccctgtataaactgaaattccccaactggacga 1026 Query: 501 ccgaattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcatgagc 560 || ||||| || ||||| |||| ||| ||||| ||| || |||||||||||||||| | Sbjct: 1025 ccaaattgttctctctggcgaatatagggaagtacattgtcgaggcatgcctgcatgatc 966 Query: 561 ccaataggacccccagctaatacaagtctttccagatcaagaccagacatcatgacataa 620 || | || || | ||||| |||||||| |||| ||| ||||| ||||||| ||||| Sbjct: 965 cctaagggcccagctgctaaaacaagtctctccaaatccagacctgacatcagaacatac 906 Query: 621 acaccttttccttc 634 || ||||||||||| Sbjct: 905 actccttttccttc 892
>emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isovaleryl-CoA dehydrogenase/auxin binding protein Length = 3572 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 179 ttgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaatctcg 238 ||||| ||||| || || || ||||||||||||||||||||||| || || || |||||| Sbjct: 3334 ttgaagagctcgcgtcctataatcattcttctgatctcactagttccggctccgatctcg 3275 Query: 239 aacagttttgcatctct 255 | ||||| |||||||| Sbjct: 3274 taaagtttagcatctct 3258 Score = 48.1 bits (24), Expect = 0.039 Identities = 78/96 (81%) Strand = Plus / Minus Query: 524 ataaggaagaacaacatcaaggcatgcctgcatgagcccaataggacccccagctaatac 583 ||||||||| |||||||| || ||||||||||| | |||| ||||| || | ||| || Sbjct: 2740 ataaggaaggacaacatcgagacatgcctgcataataccaaggggaccacctgataaaac 2681 Query: 584 aagtctttccagatcaagaccagacatcatgacata 619 ||| ||||||| ||| | || |||||||||||||| Sbjct: 2680 aagcctttccaaatccaaccccgacatcatgacata 2645 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 663 aaagcagttctcaaagacaagctcacat 690 |||||| ||||| ||||||||||||||| Sbjct: 2516 aaagcaattctcgaagacaagctcacat 2489
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11 Length = 91274 Score = 56.0 bits (28), Expect = 2e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 477 aactgaaattcaccaatcggacgcccgaattgctccctctgtcgaacataaggaagaaca 536 ||||||||||| |||| ||||| || ||||| || ||||| |||| ||| ||||||||| Sbjct: 53105 aactgaaattccccaactggacgaccaaattgttctctctggcgaatatagggaagaaca 53164 Query: 537 acatcaaggcatgcctgcatgagcccaataggacccccagctaatacaagtctttccaga 596 || |||||||||||||||| ||| | || || | ||||| |||||||| |||| | Sbjct: 53165 ttgtcgaggcatgcctgcatgatccctaagggcccagctgctaaaacaagtctctccaaa 53224 Query: 597 tcaagaccagacatca 612 || ||||| ||||||| Sbjct: 53225 tccagacctgacatca 53240 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 381 tcaactttgccattatcacagtccctagcaactgagta 418 |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 52836 tcaactttcccattgtcacagtccctcgcaacagagta 52873
>emb|AJ278987.1|STU278987 Solanum tuberosum mRNA for isovaleryl-CoA dehydrogenase (ivd1 gene) Length = 1406 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 504 aattgctccctctgtcgaacataaggaagaacaacatcaaggcatgcctgcat 556 ||||||||||| |||||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 947 aattgctccctttgtcgaacgtaaggaataacaatatccatacatgcctgcat 895
>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence Length = 131620 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 598 caagaccagacatcatgacata 619 |||||||||||||||||||||| Sbjct: 55274 caagaccagacatcatgacata 55253
>emb|CR847948.16| Zebrafish DNA sequence from clone CH211-252L12 in linkage group 13, complete sequence Length = 168946 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 477 aactgaaattcaccaatcggac 498 |||||||||||||||||||||| Sbjct: 119967 aactgaaattcaccaatcggac 119988
>emb|BX957362.26| Zebrafish DNA sequence from clone CH211-122F10 in linkage group 7, complete sequence Length = 191638 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tttcagcagcaaagaggatta 360 ||||||||||||||||||||| Sbjct: 61628 tttcagcagcaaagaggatta 61648
>emb|BX936340.7| Zebrafish DNA sequence from clone CH211-286P18 in linkage group 12, complete sequence Length = 85745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 tttcagcagcaaagaggatta 360 ||||||||||||||||||||| Sbjct: 12052 tttcagcagcaaagaggatta 12032
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence Length = 168197 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 679 acaagctcacatgtgtcactt 699 ||||||||||||||||||||| Sbjct: 158427 acaagctcacatgtgtcactt 158407
>gb|AC141429.4| Mus musculus BAC clone RP23-56L6 from chromosome 18, complete sequence Length = 192527 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 523 cataaggaagaacaacatcaa 543 ||||||||||||||||||||| Sbjct: 74840 cataaggaagaacaacatcaa 74820
>emb|CR659357.2|CNS0F7QB Tetraodon nigroviridis full-length cDNA Length = 1085 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 tcctgctcacctcctccagtt 129 ||||||||||||||||||||| Sbjct: 729 tcctgctcacctcctccagtt 709
>gb|AC110871.6| Homo sapiens 3 BAC RP11-639B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97110 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 tgccattttcccctgtaagaa 478 ||||||||||||||||||||| Sbjct: 25346 tgccattttcccctgtaagaa 25326
>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III gene, partial cds, complete sequence Length = 188078 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 aaggattggatagaacatcat 67 ||||||||||||||||||||| Sbjct: 157407 aaggattggatagaacatcat 157427
>gb|AY917022.1| Taiwania cryptomerioides voucher NSYSU 62-3B clone 2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY917021.1| Taiwania cryptomerioides voucher NSYSU 62-3A clone 1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY917019.1| Taiwania cryptomerioides voucher NSYSU 62-2c clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1089 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 840 gcctcaagtgcaacttgtgtt 820
>gb|AY916981.1| Taiwania cryptomerioides voucher NSYSU 45-2A clone 1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1087 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 838 gcctcaagtgcaacttgtgtt 818
>gb|AY916952.1| Taiwania cryptomerioides voucher NSYSU 33-2B2 clone 2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916950.1| Taiwania cryptomerioides voucher NSYSU 33-2a2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916949.1| Taiwania cryptomerioides voucher NSYSU 33-2C2 clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916903.1| Taiwania cryptomerioides voucher NSYSU 24-4C clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916896.1| Taiwania cryptomerioides voucher NSYSU 24-2B clone 2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916890.1| Taiwania cryptomerioides voucher NSYSU 23-3C clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1087 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 838 gcctcaagtgcaacttgtgtt 818
>gb|AY916875.1| Taiwania cryptomerioides voucher NSYSU 7-2C clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 839 gcctcaagtgcaacttgtgtt 819
>gb|AY916854.1| Taiwania cryptomerioides voucher NSYSU 19-3A clone 1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1089 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gcctcaagtgcaacttgtgtt 334 ||||||||||||||||||||| Sbjct: 840 gcctcaagtgcaacttgtgtt 820
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence Length = 197080 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 679 acaagctcacatgtgtcactt 699 ||||||||||||||||||||| Sbjct: 26889 acaagctcacatgtgtcactt 26869
>ref|NM_128998.3| Arabidopsis thaliana unknown protein AT2G34460 mRNA, complete cds Length = 1096 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 81 ttccttcttcaccaagaaca 100
>ref|XM_510308.1| PREDICTED: Pan troglodytes LOC453333 (LOC453333), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1736 tcattgatgtagccattgccaccaaaacactg 1705
>gb|AC154827.3| Mus musculus BAC clone RP24-546P18 from chromosome 14, complete sequence Length = 168432 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 agatggcttccagaagaataattt 169 |||||||||||||| ||||||||| Sbjct: 73427 agatggcttccagaggaataattt 73404
>gb|BC077756.1| Xenopus laevis MGC79063 protein, mRNA (cDNA clone MGC:79063 IMAGE:4956939), complete cds Length = 3081 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaacaccttttccttcttca 638 |||||||||||||||||||| Sbjct: 2119 aaacaccttttccttcttca 2100
>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research Institute) complete sequence Length = 238466 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cattatcacagtccctagca 410 |||||||||||||||||||| Sbjct: 158966 cattatcacagtccctagca 158947
>gb|AC133092.4| Mus musculus BAC clone RP23-404G6 from chromosome 3, complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tgtacatgtctgccattttc 467 |||||||||||||||||||| Sbjct: 28769 tgtacatgtctgccattttc 28788
>gb|BC017202.2| Homo sapiens isovaleryl Coenzyme A dehydrogenase, mRNA (cDNA clone MGC:3496 IMAGE:3627787), complete cds Length = 1816 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1171 tcattgatgtagccattgccaccaaaacactg 1140
>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete sequence Length = 166751 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cattatcacagtccctagca 410 |||||||||||||||||||| Sbjct: 154530 cattatcacagtccctagca 154511
>gb|AC101968.11| Mus musculus chromosome 3, clone RP24-257N17, complete sequence Length = 177613 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tgtacatgtctgccattttc 467 |||||||||||||||||||| Sbjct: 22616 tgtacatgtctgccattttc 22597
>gb|BT013129.1| Lycopersicon esculentum clone 114421R, mRNA sequence Length = 1106 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tttcagcagcaaagaggatt 359 |||||||||||||||||||| Sbjct: 42 tttcagcagcaaagaggatt 23
>ref|NM_002225.2| Homo sapiens isovaleryl Coenzyme A dehydrogenase (IVD), nuclear gene encoding mitochondrial protein, mRNA Length = 2216 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1503 tcattgatgtagccattgccaccaaaacactg 1472
>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence Length = 214625 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 680 caagctcacatgtgtcactt 699 |||||||||||||||||||| Sbjct: 63800 caagctcacatgtgtcactt 63819
>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research Institute) complete sequence Length = 224326 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cattatcacagtccctagca 410 |||||||||||||||||||| Sbjct: 71475 cattatcacagtccctagca 71456
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence Length = 179409 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 acaccttttccttcttcacc 640 |||||||||||||||||||| Sbjct: 121597 acaccttttccttcttcacc 121578
>emb|CT030360.1| Xenopus tropicalis finished cDNA, clone TGas106c19 Length = 1862 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 ggtgtacatgtctgccattttccc 469 |||||||||||| ||||||||||| Sbjct: 997 ggtgtacatgtcggccattttccc 974
>gb|BT000884.1| Arabidopsis thaliana clone C105360 unknown protein (At2g34460) mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 54 ttccttcttcaccaagaaca 73
>gb|AC092208.6| Homo sapiens BAC clone RP11-476O21 from 7, complete sequence Length = 135912 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 656 aggcacaaaagcagttctca 675 |||||||||||||||||||| Sbjct: 61912 aggcacaaaagcagttctca 61893
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence Length = 147345 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 acaccttttccttcttcacc 640 |||||||||||||||||||| Sbjct: 64210 acaccttttccttcttcacc 64229
>emb|AJ012255.1|LMO012255 Listeria monocytogenes dlt operon Length = 5637 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ttgcgatcaactttgccatt 394 |||||||||||||||||||| Sbjct: 2006 ttgcgatcaactttgccatt 1987
>emb|AL512648.21| Human DNA sequence from clone RP11-465C24 on chromosome 13, complete sequence Length = 61798 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 acatcatgacataaacacct 626 |||||||||||||||||||| Sbjct: 29077 acatcatgacataaacacct 29058
>gb|AY034977.1| Arabidopsis thaliana unknown protein (At2g34460) mRNA, partial cds Length = 934 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 18 ttccttcttcaccaagaaca 37
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cagaagaataatttcagtcc 175 |||||||||||||||||||| Sbjct: 141411 cagaagaataatttcagtcc 141392
>gb|BT007919.1| Synthetic construct Homo sapiens isovaleryl Coenzyme A dehydrogenase mRNA, partial cds Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
>gb|BT007145.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
>emb|CR858716.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1339 (from clone DKFZp469A1339) Length = 1966 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1169 tcattgatgtagccattgccaccaaaacactg 1138
>gb|AC095351.5| Homo sapiens X BAC RP11-359C4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194296 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ttccagaagaataatttcag 172 |||||||||||||||||||| Sbjct: 9613 ttccagaagaataatttcag 9594
>dbj|AK122922.1| Homo sapiens cDNA FLJ16602 fis, clone TESTI4007816, highly similar to Isovaleryl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.10) Length = 4256 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1103 tcattgatgtagccattgccaccaaaacactg 1072
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 100175 ttccttcttcaccaagaaca 100194
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 74027 ttccttcttcaccaagaaca 74008
>gb|AF078902.1| Sorghum bicolor centromere element pHind12, complete sequence Length = 2008 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 actcatttatgtatccattg 295 |||||||||||||||||||| Sbjct: 1529 actcatttatgtatccattg 1510
>emb|AJ628768.1| Bacteriophage S-RSM2 ORF1, omp1 gene, psbA gene, psbD gene and tal gene Length = 4758 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 630 ccttcttcaccaagaacattctct 653 |||||| ||||||||||||||||| Sbjct: 3565 ccttctacaccaagaacattctct 3588
>gb|AY056425.1| Arabidopsis thaliana At2g34460/T31E10.20 mRNA, complete cds Length = 893 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 33 ttccttcttcaccaagaaca 52
>gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete sequence Length = 45675 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 ttttccttcttcaccaagaa 645 |||||||||||||||||||| Sbjct: 1967 ttttccttcttcaccaagaa 1948
>ref|NM_071946.4| Caenorhabditis elegans Serpentine Receptor, class R family member (srr-4) (srr-4) mRNA, complete cds Length = 1317 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 ttttccttcttcaccaagaa 645 |||||||||||||||||||| Sbjct: 274 ttttccttcttcaccaagaa 255
>gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid clone D75C1 map 21q22.2, complete sequence Length = 40874 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 ccattatcacagtccctagcaact 413 ||||| |||||||||||||||||| Sbjct: 9961 ccattctcacagtccctagcaact 9984
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aattatcattcttctgatct 215 |||||||||||||||||||| Sbjct: 58706 aattatcattcttctgatct 58725
>emb|BX819331.1|CNS0AA83 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 ttccttcttcaccaagaaca 647 |||||||||||||||||||| Sbjct: 81 ttccttcttcaccaagaaca 100
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cattatcacagtccctagca 410 |||||||||||||||||||| Sbjct: 982868 cattatcacagtccctagca 982849
>gb|BC045100.1| Xenopus laevis, clone IMAGE:5542112, mRNA Length = 3061 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaacaccttttccttcttca 638 |||||||||||||||||||| Sbjct: 2098 aaacaccttttccttcttca 2079
>ref|NM_001011380.1| Xenopus tropicalis hypothetical LOC496848 (LOC496848), mRNA Length = 1892 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 ggtgtacatgtctgccattttccc 469 |||||||||||| ||||||||||| Sbjct: 1009 ggtgtacatgtcggccattttccc 986
>gb|AY892811.1| Synthetic construct Homo sapiens clone FLH022793.01L isovaleryl coenzyme A dehydrogenase (IVD) mRNA, partial cds Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
>gb|AY890339.1| Synthetic construct Homo sapiens clone FLH022797.01X isovaleryl Coenzyme A dehydrogenase (IVD) mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
>gb|AY890338.1| Synthetic construct Homo sapiens clone FLH022796.01X isovaleryl Coenzyme A dehydrogenase (IVD) mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 ccattatcacagtccctagcaact 413 ||||| |||||||||||||||||| Sbjct: 235324 ccattctcacagtccctagcaact 235301
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 Length = 340000 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 ccattatcacagtccctagcaact 413 ||||| |||||||||||||||||| Sbjct: 302753 ccattctcacagtccctagcaact 302776
>emb|CR352252.12| Zebrafish DNA sequence from clone CH211-181P13 in linkage group 22, complete sequence Length = 115241 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 tcattcttctgatctcacta 220 |||||||||||||||||||| Sbjct: 36346 tcattcttctgatctcacta 36365
>gb|BC088561.1| Xenopus tropicalis hypothetical LOC496848, mRNA (cDNA clone MGC:97746 IMAGE:6987702), complete cds Length = 1892 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 ggtgtacatgtctgccattttccc 469 |||||||||||| ||||||||||| Sbjct: 1009 ggtgtacatgtcggccattttccc 986
>gb|AF070531.1|AF070531 Homo sapiens clone 24764 mRNA sequence Length = 1544 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 537 tcattgatgtagccattgccaccaaaacactg 506
>emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chromosome 14, complete sequence Length = 205581 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 agatggcttccagaagaataattt 169 |||||||||||||| ||||||||| Sbjct: 111172 agatggcttccagaggaataattt 111195
>gb|M34192.1|HUMICOA Human isovaleryl-coA dehydrogenase (IVD) mRNA, complete cds Length = 1881 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 tcatttatgtatccattgccaccaagacactg 309 ||||| ||||| ||||||||||||| |||||| Sbjct: 1175 tcattgatgtagccattgccaccaaaacactg 1144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,723,761 Number of Sequences: 3902068 Number of extensions: 6723761 Number of successful extensions: 130759 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130381 Number of HSP's gapped (non-prelim): 335 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
