ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah62h11 | 656 | BJ486696 | not_full | gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O16, complete sequence Length = 141894 | 40 | not_full | FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3 Length = 622 | 8 | -- | --- | - | -- | --- | - |
| rbah62h10 | 476 | BJ486695 | not_full | emb|X15232.1|TAPGKCYT Wheat mRNA for cytosolic phosphoglycerate kinase (EC 2.7.2.3) Length = 1473 | 190 | not_full | PGKY_WHEAT (P12783) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) Length = 401 | 258 | -- | --- | - | -- | --- | - |
| rbah62h09 | 475 | BJ486694 | not_full | emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 | 316 | not_full | CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) Length = 270 | 101 | -- | --- | - | -- | --- | - |
| rbah62h07 | 599 | BJ552983 | not_full | gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 | 109 | not_full | SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS2 protein) Length = 115 | 42 | -- | --- | - | -- | --- | - |
| rbah62h06 | 436 | BJ552982 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 66 | not_full | GIDB_PORGI (Q7MV10) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited division protein B) Length = 221 | 7 | -- | --- | - | -- | --- | - |
| rbah62h04 | 469 | BJ486693 | not_full | gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 | 22 | not_full | TSP4_HUMAN (P35443) Thrombospondin-4 precursor Length = 961 | 6 | -- | --- | - | -- | --- | - |
| rbah62h03 | 434 | BJ486692 | not_full | gb|BT009445.1| Triticum aestivum clone wlmk8.pk0008.e8:fis, full insert mRNA sequence Length = 2162 | 75 | not_full | CAPS_DROME (Q9NHE5) Calcium-dependent secretion activator (dCAPS) Length = 1436 | 4 | -- | --- | - | -- | --- | - |
| rbah62h02 | 552 | BJ552981 | not_full | gb|BT009270.1| Triticum aestivum clone wlk8.pk0008.g5:fis, full insert mRNA sequence Length = 788 | 107 | not_full | FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 | 46 | -- | --- | - | -- | --- | - |
| rbah62g24 | 859 | BJ486691 | not_full | gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 168 | -- | --- | - | -- | --- | - |
| rbah62g23 | 706 | BJ486690 | not_full | gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 169 | -- | --- | - | -- | --- | - |
| rbah62g22 | 190 | BJ552980 | not_full | emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chromosome 6 Contains the 5NULL end of the HDAC2 gene for histone deacetylase 2 (human transcriptional regulator homolog RPD3, YAF1), two putative novel genes, a pseudogene similar to mouse D7Rp2e | 46 | not_full | RNHL_NEUCR (Q9P5X8) Probable ribonuclease HI large subunit (EC 3.1.26.4) (RNase HI large subunit) (RNase H(35)) Length = 317 | 1 | -- | --- | - | -- | --- | - |
| rbah62g21 | 339 | BJ486689 | not_full | ref|XM_468453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2588 | 78 | not_full | PYRB_STRP8 (Q8P1G1) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase) Length = 311 | 11 | -- | --- | - | -- | --- | - |
| rbah62g20 | 474 | BJ486688 | not_full | gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 | 86 | not_full | PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 274 | 95 | -- | --- | - | -- | --- | - |
| rbah62g19 | 433 | BJ552979 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 148 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 55 | -- | --- | - | -- | --- | - |
| rbah62g18 | 654 | BJ486687 | not_full | gb|AF495586.1| Setaria italica putative C4 phosphoenolpyruvate carboxylase (ppc) mRNA, complete cds Length = 3214 | 500 | not_full | CAPP1_SORBI (P29195) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (PEPC 1) (CP21) Length = 960 | 105 | -- | --- | - | -- | --- | - |
| rbah62g17 | 183 | BJ486686 | not_full | emb|AL390199.10| Human DNA sequence from clone RP11-552F24 on chromosome Xq25-26.1, complete sequence Length = 69951 | 22 | not_full | YMX8_YEAST (Q04301) Hypothetical transport protein YMR088C Length = 562 | 1 | -- | --- | - | -- | --- | - |
| rbah62g16 | 419 | BJ486685 | not_full | ref|XM_478915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2469 | 68 | not_full | PYRD_NEIMB (Q9K1D7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) Length = 335 | 3 | -- | --- | - | -- | --- | - |
| rbah62g14 | 475 | BJ486684 | not_full | gb|AF411229.2| Hordeum vulgare gigantea-like protein mRNA, partial cds Length = 2900 | 39 | not_full | GIGAN_ORYSA (Q9AWL7) GIGANTEA protein Length = 1160 | 8 | -- | --- | - | -- | --- | - |
| rbah62g13 | 477 | BJ486683 | not_full | ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 | 359 | not_full | CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor (LHCI type III CAB-8) Length = 273 | 79 | -- | --- | - | -- | --- | - |
| rbah62g11 | 637 | BJ486682 | not_full | gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 | 500 | not_full | HSP83_ORYSA (Q07078) Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) Length = 699 | 169 | -- | --- | - | -- | --- | - |
| rbah62g09 | 449 | BJ486681 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 14 | not_full | 4CL2_SOLTU (P31685) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) Length = 545 | 184 | -- | --- | - | -- | --- | - |
| rbah62g07 | 300 | BJ486680 | not_full | dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 | 5 | not_full | VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor Length = 848 | 3 | -- | --- | - | -- | --- | - |
| rbah62g05 | 645 | BJ486679 | not_full | gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 | 500 | not_full | HSP83_ORYSA (Q07078) Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) Length = 699 | 168 | -- | --- | - | -- | --- | - |
| rbah62g04 | 284 | BJ552978 | not_full | emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase Length = 1533 | 29 | not_full | HHP2_SCHPO (P40236) Casein kinase I homolog hhp2 (EC 2.7.11.1) Length = 400 | 5 | -- | --- | - | -- | --- | - |
| rbah62g03 | 488 | BJ486678 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 500 | not_full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 98 | -- | --- | - | -- | --- | - |
| rbah62g02 | 531 | BJ552977 | not_full | gb|AY111490.1| Zea mays CL44711_1 mRNA sequence Length = 637 | 20 | not_full | SP4_MOUSE (Q62445) Transcription factor Sp4 Length = 782 | 4 | -- | --- | - | -- | --- | - |
| rbah62g01 | 485 | BJ486677 | not_full | emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 | 317 | not_full | CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) Length = 270 | 100 | -- | --- | - | -- | --- | - |
| rbah62f24 | 685 | BJ486676 | not_full | gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 | 43 | not_full | RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) Length = 791 | 6 | -- | --- | - | -- | --- | - |
| rbah62f23 | 598 | BJ486675 | not_full | gb|AC117262.2| Mus musculus BAC clone RP24-537M7 from 2, complete sequence Length = 156547 | 39 | not_full | OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7) Length = 766 | 2 | -- | --- | - | -- | --- | - |
| rbah62f22 | 311 | BJ486674 | not_full | gb|AY927891.1| Helicolenus sp. PJS-2005 isolate 23Tasmania control region gene, complete sequence; mitochondrial Length = 443 | 2 | not_full | LAMB3_HUMAN (Q13751) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Laminin B1k chain) (Kalinin B1 chain) Length = 1172 | 1 | -- | --- | - | -- | --- | - |
| rbah62f21 | 391 | BJ486673 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 52 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 21 | -- | --- | - | -- | --- | - |
| rbah62f20 | 515 | BJ486672 | not_full | ref|XM_478639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1749 | 57 | not_full | RF2_SYNY3 (P74476) Peptide chain release factor 2 (RF-2) Length = 372 | 89 | -- | --- | - | -- | --- | - |
| rbah62f19 | 498 | BJ486671 | not_full | emb|X95864.1|TTANT2 T.turgidum ant gene (1494bp) Length = 1494 | 130 | not_full | ADT1_WHEAT (Q41629) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) Length = 331 | 94 | -- | --- | - | -- | --- | - |
| rbah62f18 | 559 | BJ552976 | not_full | ref|XM_476547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2188 | 58 | not_full | DHSA_ARATH (O82663) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 634 | 34 | -- | --- | - | -- | --- | - |
| rbah62f17 | 577 | BJ552975 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 54 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 68 | -- | --- | - | -- | --- | - |
| rbah62f16 | 656 | BJ486670 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 103 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 25 | -- | --- | - | -- | --- | - |
| rbah62f13 | 523 | BJ552974 | not_full | gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 | 157 | not_full | RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 | 79 | -- | --- | - | -- | --- | - |
| rbah62f11 | 618 | BJ486669 | not_full | emb|X69087.1|HVCGSA H.vulgare mRNA for cytoplasmic glutamine synthetase Length = 1456 | 319 | not_full | GLNA3_HORVU (Q06378) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) (Cytoplasmic GS3) Length = 356 | 94 | -- | --- | - | -- | --- | - |
| rbah62f08 | 487 | BJ486668 | not_full | gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 | 500 | not_full | NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1) Length = 389 | 8 | -- | --- | - | -- | --- | - |
| rbah62f06 | 346 | BJ486667 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbah62f05 | 570 | BJ552973 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 328 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 5 | -- | --- | - | -- | --- | - |
| rbah62f04 | 232 | BJ486666 | not_full | gb|AC149072.1| x. tropicalis BAC clone ISB1-341L17 containing genes for vex1 and vent1, complete sequence Length = 65797 | 4 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah62f03 | 357 | BJ552972 | not_full | emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3 Length = 1979 | 39 | not_full | CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 | 34 | -- | --- | - | -- | --- | - |
| rbah62f02 | 552 | BJ486665 | not_full | dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E09, full insert sequence Length = 726 | 45 | not_full | RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4) (AtRAD23-4) Length = 378 | 22 | -- | --- | - | -- | --- | - |
| rbah62f01 | 501 | BJ486664 | not_full | ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 | 87 | not_full | ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-) Length = 458 | 39 | -- | --- | - | -- | --- | - |
| rbah62e24 | 494 | BJ486663 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 75 | not_full | SYGB_VIBCH (Q9KVW8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 | 18 | -- | --- | - | -- | --- | - |
| rbah62e23 | 612 | BJ552971 | not_full | gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full insert mRNA sequence Length = 1315 | 61 | not_full | GTR8_MOUSE (Q9JIF3) Solute carrier family 2, facilitated glucose transporter member 8 (Glucose transporter type 8) (Glucose transporter type X1) Length = 477 | 94 | -- | --- | - | -- | --- | - |
| rbah62e22 | 508 | BJ552970 | not_full | emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 | 57 | not_full | RUBA_WHEAT (P08823) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) Length = 543 | 399 | -- | --- | - | -- | --- | - |
| rbah62e21 | 281 | BJ486662 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 50 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 8 | -- | --- | - | -- | --- | - |
| rbah62e19 | 510 | BJ486661 | not_full | gb|AC102543.9| Mus musculus chromosome 14, clone RP23-112K14, complete sequence Length = 214356 | 33 | not_full | C71AG_ARATH (Q9FH66) Cytochrome P450 71A16 (EC 1.14.-.-) Length = 497 | 22 | -- | --- | - | -- | --- | - |
