ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor 28 7.7
2VGLH_EHV1 (P68330) Glycoprotein H precursor 28 7.7
3ILA2_CAEEL (Q21508) Probable insulin-like peptide alpha-type 2 p... 28 7.7

>VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor|
          Length = 848

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 69  TVTLHRAIADAAGLTVPRNILLNSIGTLVLSH*LLICFFIITL 197
           TVTL  A A  +   VP   L  SIG L+L+  +LI + II +
Sbjct: 791 TVTLMSAFASYSSFKVPSTYLWASIGGLLLA--ILILYIIIKM 831



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>VGLH_EHV1 (P68330) Glycoprotein H precursor|
          Length = 848

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 69  TVTLHRAIADAAGLTVPRNILLNSIGTLVLSH*LLICFFIITL 197
           TVTL  A A  +   VP   L  SIG L+L+  +LI + II +
Sbjct: 791 TVTLMSAFASYSSFKVPSTYLWASIGGLLLA--ILILYIIIKM 831



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>ILA2_CAEEL (Q21508) Probable insulin-like peptide alpha-type 2 precursor|
          Length = 83

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 168 LLICFFIITLEIRSLQAHTN 227
           +LICFFI  +++ ++ AHT+
Sbjct: 6   ILICFFIFLVQVSTMDAHTD 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,576,344
Number of Sequences: 219361
Number of extensions: 666470
Number of successful extensions: 1406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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