ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full... 422 e-115
2ref|XM_464773.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
7gb|AY165599.1| Saccharum hybrid cultivar putative sugar transpor... 105 2e-19
8gb|AY105508.1| Zea mays PCO114533 mRNA sequence 98 4e-17
9emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transpor... 90 1e-14
10emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transpo... 90 1e-14
11ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative... 72 2e-09
12gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 geno... 72 2e-09
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
14dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
15dbj|AK067391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
16dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
17dbj|AK059705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
19gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
21gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
22ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ ... 48 0.034
23emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, B... 48 0.034
24emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosacch... 48 0.034
25ref|XM_468552.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.53
26gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complet... 44 0.53
27dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
28dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.53
29gb|AC151329.2| Xenopus tropicalis clone ISB-298E7, complete sequ... 42 2.1
30ref|NM_006536.4| Homo sapiens chloride channel, calcium activate... 42 2.1
31gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosom... 42 2.1
32gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, comp... 42 2.1
33gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, co... 42 2.1
34gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Canc... 42 2.1
35gb|AC015938.17| Homo sapiens chromosome 17, clone CTD-3194G12, c... 42 2.1
36gb|BC041096.1| Homo sapiens chloride channel, calcium activated,... 42 2.1
37gb|AF127980.1|AF127980 Homo sapiens calcium-activated chloride c... 42 2.1
38gb|AF043977.1|AF043977 Homo sapiens calcium-activated chloride c... 42 2.1
39dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.1
40dbj|AB026833.1| Homo sapiens mRNA for chloride channel protein, ... 42 2.1
41ref|XM_648180.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.3
42emb|AL441986.19| Human DNA sequence from clone RP11-349O10 on ch... 40 8.3
43emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chr... 40 8.3
44emb|AJ704629.1| Danio rerio mRNA for PrP-like protein (stPrP567 ... 40 8.3
45emb|BX044541.1|CNS096J5 Single read from an extremity of a full-... 40 8.3
46emb|AJ628407.1| Thylamys pusilla partial ttr gene for transthyre... 40 8.3
47emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chr... 40 8.3
48gb|AC090772.9| Homo sapiens chromosome 18, clone RP11-799B12, co... 40 8.3
49gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete s... 40 8.3
50gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 8.3
51ref|NM_001013298.1| Danio rerio prion protein, related sequence ... 40 8.3
52gb|U21323.1| Caenorhabditis elegans cosmid C45G9, complete sequence 40 8.3
53ref|NM_065671.3| Caenorhabditis elegans C45G9.5 (C45G9.5) mRNA, ... 40 8.3
54emb|BX294369.6| Zebrafish DNA sequence from clone CH211-223H7 in... 40 8.3
55gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24... 40 8.3
56gb|AC017111.4|AC017111 Homo sapiens BAC clone RP11-571G1 from 13... 40 8.3
57emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in ... 40 8.3
58dbj|AB011257.1| Rice yellow stunt virus genomic RNA, complete se... 40 8.3
59emb|AJ333363.1|HSA333363 Homo sapiens genomic sequence surroundi... 40 8.3
60emb|AJ620614.1| Danio rerio mRNA for prion protein 2 (prp2 gene) 40 8.3
61emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on ch... 40 8.3 
>gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full insert mRNA
            sequence
          Length = 1315

 Score =  422 bits (213), Expect = e-115
 Identities = 306/335 (91%), Gaps = 9/335 (2%)
 Strand = Plus / Minus

                                                                        
Query: 115  aatagacaatgaaatgggggcatgaaatccttctacttttacagcttcca-ttcctcatg 173
            ||||||| ||||||||||||||||| ||||| |||||||||||||||||  |||||| ||
Sbjct: 1056 aatagacgatgaaatgggggcatgagatcctcctacttttacagcttcccgttcctcgtg 997

                                                                        
Query: 174  atgaattctttgggtagttatctcatttacaactcaaa-gtttttccgttcctcacgagg 232
            ||||  ||||||||||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 996  atgagctctttgggtagctgtctcatttacaactcaaaagtttttccgttcctcacgagg 937

                                                                        
Query: 233  atccgtccaatttgcaattttcagtgcag-------tgtgcaaactgaaagcaaagcttc 285
            | |||||||||||||||||||||| ||||       |||||||||||||| ||||||| |
Sbjct: 936  acccgtccaatttgcaattttcagcgcagaccgcagtgtgcaaactgaaaacaaagctcc 877

                                                                        
Query: 286  atggcaaatcaggcaatggtggcctgcgcttgctttgccccaaccgcaaagaactcggtg 345
            |||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 876  atgatgaatcaggcaatggtggcctgcgcttgcttcgccccaaccgcaaagaactcggtg 817

                                                                        
Query: 346  atgacctcgaggggcataccctttgtctctgggacctttaggtagacgaacacaaaggcg 405
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 816  atgacctcgaggggcatgccctttgtctctgggacctttaggtagacgaacacaaaggca 757

                                               
Query: 406  atgcagcaaacgattgcatatataccaaagacacc 440
            ||||||||||||| |||||||||||||||||||||
Sbjct: 756  atgcagcaaacgactgcatatataccaaagacacc 722



 Score =  293 bits (148), Expect = 3e-76
 Identities = 171/179 (95%)
 Strand = Plus / Minus

                                                                       
Query: 434 agacacctcggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaa 493
           ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 632 agacaccacggactctggtggggaaaatctctgcacatagaatgttggggatcgggccaa 573

                                                                       
Query: 494 agcccataacaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggg 553
           ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 572 agcccatgacaaagcagcagaagtagacaatgacgctaactgtggagagcacagcgtggg 513

                                                                      
Query: 554 gcaccgtactcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
           |||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||
Sbjct: 512 gcaccgtactcaagttgataacattgaccacacccaaaacaattagggatgctatcaag 454



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                        
Query: 35   tttttctttatttaagacatcaacgtagtagttcagaatcagattagaaagttgaacatc 94
            |||||||||||||  ||||||| | | |||||||||||||||||||| |||||||||| |
Sbjct: 1161 tttttctttatttcggacatcagcatggtagttcagaatcagattagcaagttgaacaac 1102

                           
Query: 95   cctaaaacaactaat 109
            |||| | ||||||||
Sbjct: 1101 cctacagcaactaat 1087
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>ref|XM_464773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2934

 Score =  135 bits (68), Expect = 2e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                        
Query: 442  cggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccata 501
            ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || ||||| 
Sbjct: 2286 cggaccctagtggggaagatctccgcacacagaatgttggggatcggaccgaatcccatg 2227

                                                                        
Query: 502  acaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgta 561
            || ||||||||||||||||  |||||||| | |||||||||  | ||||||| ||| |||
Sbjct: 2226 acgaagcagcagaagtagatgatgacgctgattgtggagagtgcggcgtgggccactgta 2167

                                                               
Query: 562  ctcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
            | || |  ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 2166 cccaggtcgataacattggacacaaccaagacaactagagatgctatcaag 2116



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                        
Query: 315  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 374
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2509 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 2450

                                                                        
Query: 375  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 434
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 2449 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 2390

                   
Query: 435  gacacct 441
            |||||||
Sbjct: 2389 gacacct 2383
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                           
Query: 442     cggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccata 501
               ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || ||||| 
Sbjct: 7276694 cggaccctagtggggaagatctccgcacacagaatgttggggatcggaccgaatcccatg 7276635

                                                                           
Query: 502     acaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgta 561
               || ||||||||||||||||  |||||||| | |||||||||  | ||||||| ||| |||
Sbjct: 7276634 acgaagcagcagaagtagatgatgacgctgattgtggagagtgcggcgtgggccactgta 7276575

                                                                  
Query: 562     ctcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
               | || |  ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 7276574 cccaggtcgataacattggacacaaccaagacaactagagatgctatcaag 7276524



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                           
Query: 315     ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 374
               ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 7276917 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 7276858

                                                                           
Query: 375     tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 434
                |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 7276857 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 7276798

                      
Query: 435     gacacct 441
               |||||||
Sbjct: 7276797 gacacct 7276791



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 451      gtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcag 510
                |||||||| ||||| || || || ||||||||||| ||||| || ||||| || ||||||
Sbjct: 35799610 gtggggaatatctcggcgcacaggatgttggggatggggccgaaccccatgacgaagcag 35799551

                  
Query: 511      ca 512
                ||
Sbjct: 35799550 ca 35799549
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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  135 bits (68), Expect = 2e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                         
Query: 442   cggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccata 501
             ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || ||||| 
Sbjct: 52502 cggaccctagtggggaagatctccgcacacagaatgttggggatcggaccgaatcccatg 52443

                                                                         
Query: 502   acaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgta 561
             || ||||||||||||||||  |||||||| | |||||||||  | ||||||| ||| |||
Sbjct: 52442 acgaagcagcagaagtagatgatgacgctgattgtggagagtgcggcgtgggccactgta 52383

                                                                
Query: 562   ctcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
             | || |  ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 52382 cccaggtcgataacattggacacaaccaagacaactagagatgctatcaag 52332



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                         
Query: 315   ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 374
             ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 52725 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 52666

                                                                         
Query: 375   tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 434
              |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 52665 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 52606

                    
Query: 435   gacacct 441
             |||||||
Sbjct: 52605 gacacct 52599
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>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full
            insert sequence
          Length = 2934

 Score =  135 bits (68), Expect = 2e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                        
Query: 442  cggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccata 501
            ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || ||||| 
Sbjct: 2285 cggaccctagtggggaagatctccgcacacagaatgttggggatcggaccgaatcccatg 2226

                                                                        
Query: 502  acaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgta 561
            || ||||||||||||||||  |||||||| | |||||||||  | ||||||| ||| |||
Sbjct: 2225 acgaagcagcagaagtagatgatgacgctgattgtggagagtgcggcgtgggccactgta 2166

                                                               
Query: 562  ctcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
            | || |  ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 2165 cccaggtcgataacattggacacaaccaagacaactagagatgctatcaag 2115



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                        
Query: 315  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 374
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2508 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 2449

                                                                        
Query: 375  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 434
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 2448 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 2389

                   
Query: 435  gacacct 441
            |||||||
Sbjct: 2388 gacacct 2382
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>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full
            insert sequence
          Length = 2378

 Score =  135 bits (68), Expect = 2e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                        
Query: 442  cggactctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccata 501
            ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || ||||| 
Sbjct: 1796 cggaccctagtggggaagatctccgcacacagaatgttggggatcggaccgaatcccatg 1737

                                                                        
Query: 502  acaaagcagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgta 561
            || ||||||||||||||||  |||||||| | |||||||||  | ||||||| ||| |||
Sbjct: 1736 acgaagcagcagaagtagatgatgacgctgattgtggagagtgcggcgtgggccactgta 1677

                                                               
Query: 562  ctcaaggtgataacattggacacaaccaaaacaattagggatgctatcaag 612
            | || |  ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 1676 cccaggtcgataacattggacacaaccaagacaactagagatgctatcaag 1626



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                        
Query: 315  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 374
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2019 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 1960

                                                                        
Query: 375  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 434
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 1959 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 1900

                   
Query: 435  gacacct 441
            |||||||
Sbjct: 1899 gacacct 1893
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>gb|AY165599.1| Saccharum hybrid cultivar putative sugar transporter type 2a mRNA,
            complete cds
          Length = 2665

 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 312  cgcttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgt 371
            |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 2319 cgcttgctttgcaccaactgcaaagaactcagtgatgacctcaaggggcatgccctttgt 2260

                                             
Query: 372  ctctgggacctttaggtagacgaacacaaaggc 404
            ||| || ||||| || ||||| |||||||||||
Sbjct: 2259 ctccggaaccttaagatagacaaacacaaaggc 2227



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 135/165 (81%)
 Strand = Plus / Minus

                                                                        
Query: 448  ctggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaag 507
            ||||| || |||| ||||||||| ||||||||||| || ||||||||||||||    |||
Sbjct: 2087 ctggttggaaaaaactctgcacatagaatgttgggaatggggccaaagcccattttgaag 2028

                                                                        
Query: 508  cagcagaagtagacaatgacgctnactgtggagagcacagcgtggggcaccgtactcaag 567
            ||||| ||||||   ||||| || | ||||||||||||||| |||  ||| |||| ||| 
Sbjct: 2027 cagcataagtaggtgatgacactaattgtggagagcacagcatggaccactgtacccaac 1968

                                                         
Query: 568  gtgataacattggacacaaccaaaacaattagggatgctatcaag 612
              ||||||||| ||||||||||  |||||||  ||||||||||||
Sbjct: 1967 tcgataacattagacacaaccaggacaattaaagatgctatcaag 1923
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>gb|AY105508.1| Zea mays PCO114533 mRNA sequence
          Length = 2180

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                        
Query: 312  cgcttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgt 371
            ||||||||| || ||||| |||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 1822 cgcttgcttcgcaccaactgcaaagaattcggtaataacctcaaggggcatcccctttgt 1763

                                                                     
Query: 372  ctctgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatat 428
            ||| |||||||| ||| |||||||||||||||  ||  |||| |||| |||||||||
Sbjct: 1762 ctcagggaccttaaggaagacgaacacaaaggaaatcaagcatacgactgcatatat 1706



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                        
Query: 460  atctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcagcagaagtag 519
            ||||||||||| | |||||||||||| || ||||| |||||||| |||||||||||||||
Sbjct: 1578 atctctgcacataaaatgttggggatgggaccaaatcccataacgaagcagcagaagtag 1519

                                              
Query: 520  acaatgacgctnactgtggagagcacagcgtggg 553
            || || || || |  |||||||||| ||| ||||
Sbjct: 1518 acgataacactgatggtggagagcaaagcatggg 1485
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>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene)
          Length = 2516

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 316  tgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctct 375
            ||||| ||||| ||||  |||||||||||||||||||| |||||||| ||||||||||| 
Sbjct: 2229 tgcttcgccccgaccgagaagaactcggtgatgacctccaggggcatgccctttgtctca 2170

                                         
Query: 376  gggacctttaggtagacgaacacaaaggc 404
            |||||||| | ||||||||| || |||||
Sbjct: 2169 gggaccttcatgtagacgaatacgaaggc 2141
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>emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene)
          Length = 2614

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 316  tgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctct 375
            ||||| ||||| ||||  |||||||||||||||||||| |||||||| ||||||||||| 
Sbjct: 2292 tgcttcgccccgaccgagaagaactcggtgatgacctccaggggcatgccctttgtctca 2233

                                         
Query: 376  gggacctttaggtagacgaacacaaaggc 404
            |||||||| | ||||||||| || |||||
Sbjct: 2232 gggaccttcatgtagacgaatacgaaggc 2204



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 450  ggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagca 509
            ||||||||||||||| || || ||||| || ||||| || ||||| ||||| || ||| |
Sbjct: 2062 ggtggggaaaatctccgcgcagagaatattcgggataggtccaaaacccatgacgaagaa 2003

                              
Query: 510  gcagaagtagacaatgac 527
            |||||||||||| |||||
Sbjct: 2002 gcagaagtagactatgac 1985
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>ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative sugar transporter
            (OSJNBb0064P21.3), mRNA
          Length = 2438

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
            |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 2151 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 2092

                                           
Query: 509  agcagaagtagacaatgacgctnactgtgga 539
            ||||||||||||  ||||| || ||||||||
Sbjct: 2091 agcagaagtagagtatgacactgactgtgga 2061



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2362 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 2313
to top
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                         
Query: 449   tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
             |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 38058 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 37999

                                            
Query: 509   agcagaagtagacaatgacgctnactgtgga 539
             ||||||||||||  ||||| || ||||||||
Sbjct: 37998 agcagaagtagagtatgacactgactgtgga 37968



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 334   aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
             ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 38269 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 38220
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                            
Query: 449      tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
                |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 20532768 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 20532709

                                               
Query: 509      agcagaagtagacaatgacgctnactgtgga 539
                ||||||||||||  ||||| || ||||||||
Sbjct: 20532708 agcagaagtagagtatgacactgactgtgga 20532678



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 334      aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
                ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 20532979 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 20532930
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>dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100A10, full
            insert sequence
          Length = 2800

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
            |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 2182 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 2123

                                           
Query: 509  agcagaagtagacaatgacgctnactgtgga 539
            ||||||||||||  ||||| || ||||||||
Sbjct: 2122 agcagaagtagagtatgacactgactgtgga 2092



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2393 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 2344
to top
>dbj|AK067391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M11, full
           insert sequence
          Length = 1564

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
           |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 992 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 933

                                          
Query: 509 agcagaagtagacaatgacgctnactgtgga 539
           ||||||||||||  ||||| || ||||||||
Sbjct: 932 agcagaagtagagtatgacactgactgtgga 902



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 1203 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1154
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>dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E10, full
            insert sequence
          Length = 2368

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
            |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 1819 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 1760

                                           
Query: 509  agcagaagtagacaatgacgctnactgtgga 539
            ||||||||||||  ||||| || ||||||||
Sbjct: 1759 agcagaagtagagtatgacactgactgtgga 1729



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2030 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1981
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>dbj|AK059705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D08, full
            insert sequence
          Length = 1625

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                        
Query: 449  tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
            |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 1007 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 948

                                           
Query: 509  agcagaagtagacaatgacgctnactgtgga 539
            ||||||||||||  ||||| || ||||||||
Sbjct: 947  agcagaagtagagtatgacactgactgtgga 917



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 1218 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1169
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                            
Query: 449      tggtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagc 508
                |||| ||||||||||||||||| |||||||| || || || || || ||||| |||||| 
Sbjct: 20544040 tggtcgggaaaatctctgcacagagaatgtttggaataggcccgaaccccatgacaaaga 20543981

                                               
Query: 509      agcagaagtagacaatgacgctnactgtgga 539
                ||||||||||||  ||||| || ||||||||
Sbjct: 20543980 agcagaagtagagtatgacactgactgtgga 20543950



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 334      aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 383
                ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 20544251 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 20544202
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>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094M06,
              complete sequence
          Length = 135583

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                          
Query: 454    gggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcagcag 513
              ||||| ||||| || || || ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 101167 gggaagatctcggcgcagaggatgttggggatggggccgaaccccatgacgaagcagcag 101108

                               
Query: 514    aagtagacaatgacgct 530
              |||||||| ||||||||
Sbjct: 101107 aagtagacgatgacgct 101091
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 454      gggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcagcag 513
                ||||| ||||| || || || ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 15928569 gggaagatctcggcgcagaggatgttggggatggggccgaaccccatgacgaagcagcag 15928510

                                 
Query: 514      aagtagacaatgacgct 530
                |||||||| ||||||||
Sbjct: 15928509 aagtagacgatgacgct 15928493
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 454      gggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcagcag 513
                ||||| ||||| || || || ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 16015945 gggaagatctcggcgcagaggatgttggggatggggccgaaccccatgacgaagcagcag 16015886

                                 
Query: 514      aagtagacaatgacgct 530
                |||||||| ||||||||
Sbjct: 16015885 aagtagacgatgacgct 16015869
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>ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside
            transporter/ sugar porter AT3G51490 mRNA, complete cds
          Length = 2190

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 389
            |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2135 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 2080
to top
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13
          Length = 94349

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 334   aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 389
             |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 50794 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 50849
to top
>emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosaccharide sensing protein 3 (mssp3
            gene)
          Length = 2190

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 334  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 389
            |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2135 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 2080
to top
>ref|XM_468552.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 451  gtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcag 510
            |||||||| ||||| || || || ||||||||||| ||||| || ||||| || ||||||
Sbjct: 1688 gtggggaatatctcggcgcacaggatgttggggatggggccgaaccccatgacgaagcag 1629

              
Query: 511  ca 512
            ||
Sbjct: 1628 ca 1627
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>gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complete sequence
          Length = 156374

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 452    tggggaaaatctctgcacaaag 473
              ||||||||||||||||||||||
Sbjct: 130635 tggggaaaatctctgcacaaag 130614
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>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 451   gtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcag 510
             |||||||| ||||| || || || ||||||||||| ||||| || ||||| || ||||||
Sbjct: 70325 gtggggaatatctcggcgcacaggatgttggggatggggccgaaccccatgacgaagcag 70266

               
Query: 511   ca 512
             ||
Sbjct: 70265 ca 70264
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    gcatgaaatccttctactttta 155
              ||||||||||||||||||||||
Sbjct: 135207 gcatgaaatccttctactttta 135228
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>gb|AC151329.2| Xenopus tropicalis clone ISB-298E7, complete sequence
          Length = 85057

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 497   ccataacaaagcagcagaagt 517
             |||||||||||||||||||||
Sbjct: 73649 ccataacaaagcagcagaagt 73669
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>ref|NM_006536.4| Homo sapiens chloride channel, calcium activated, family member 2
            (CLCA2), mRNA
          Length = 4007

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cttctacttttacagcttcca 164
            |||||||||||||||||||||
Sbjct: 2441 cttctacttttacagcttcca 2421
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>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence
          Length = 184869

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     cagattagaaagttgaacatc 94
              |||||||||||||||||||||
Sbjct: 123275 cagattagaaagttgaacatc 123255
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>gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, complete sequence
          Length = 152000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   cttctacttttacagcttcca 164
             |||||||||||||||||||||
Sbjct: 69215 cttctacttttacagcttcca 69195
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>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence
          Length = 181991

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 535    gtggagagcacagcgtggggc 555
              |||||||||||||||||||||
Sbjct: 126492 gtggagagcacagcgtggggc 126512
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>gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 140971

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 134    gcatgaaatccttctactttt 154
              |||||||||||||||||||||
Sbjct: 129763 gcatgaaatccttctactttt 129783
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>gb|AC015938.17| Homo sapiens chromosome 17, clone CTD-3194G12, complete sequence
          Length = 180393

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 535    gtggagagcacagcgtggggc 555
              |||||||||||||||||||||
Sbjct: 179111 gtggagagcacagcgtggggc 179091
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>gb|BC041096.1| Homo sapiens chloride channel, calcium activated, family member 2,
            mRNA (cDNA clone MGC:46036 IMAGE:5752653), complete cds
          Length = 3964

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cttctacttttacagcttcca 164
            |||||||||||||||||||||
Sbjct: 2398 cttctacttttacagcttcca 2378
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>gb|AF127980.1|AF127980 Homo sapiens calcium-activated chloride channel protein 3 (CaCC3)
            mRNA, complete cds
          Length = 2832

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cttctacttttacagcttcca 164
            |||||||||||||||||||||
Sbjct: 2335 cttctacttttacagcttcca 2315
to top
>gb|AF043977.1|AF043977 Homo sapiens calcium-activated chloride channel-2 (hCLCA2) mRNA,
            complete cds
          Length = 2970

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cttctacttttacagcttcca 164
            |||||||||||||||||||||
Sbjct: 2443 cttctacttttacagcttcca 2423
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>dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117b,
             complete sequence
          Length = 114918

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                         
Query: 451   gtggggaaaatctctgcacaaagaatgttggggatcgggccaaagcccataacaaagcag 510
             |||||||||||||| |||||||| || || || |  || ||||| ||||| |||||| | 
Sbjct: 51987 gtggggaaaatctcagcacaaagtatattaggtactggcccaaaacccatgacaaaggaa 51928

                          
Query: 511   cagaagtagacaa 523
             ||||| |||||||
Sbjct: 51927 cagaaatagacaa 51915
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>dbj|AB026833.1| Homo sapiens mRNA for chloride channel protein, complete cds
          Length = 3604

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cttctacttttacagcttcca 164
            |||||||||||||||||||||
Sbjct: 2376 cttctacttttacagcttcca 2356
to top
>ref|XM_648180.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (88.t00022)
            partial mRNA
          Length = 4221

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atgttttttctttatttaag 50
            ||||||||||||||||||||
Sbjct: 2782 atgttttttctttatttaag 2763
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>emb|AL441986.19| Human DNA sequence from clone RP11-349O10 on chromosome 13 Contains two
              novel genes and a peroxiredoxin 3 (PRDX3) pseudogene,
              complete sequence
          Length = 188208

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atgttttttctttatttaag 50
              ||||||||||||||||||||
Sbjct: 136629 atgttttttctttatttaag 136610
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>emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 62109

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   atgaaatccttctactttta 155
             ||||||||||||||||||||
Sbjct: 49803 atgaaatccttctactttta 49784
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>emb|AJ704629.1| Danio rerio mRNA for PrP-like protein (stPrP567 gene)
          Length = 1808

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 507  gcagcagaagtagacaatga 526
            ||||||||||||||||||||
Sbjct: 1302 gcagcagaagtagacaatga 1321
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>emb|BX044541.1|CNS096J5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC18BB09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 964

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 tgggggcatgaaatccttct 148
           ||||||||||||||||||||
Sbjct: 391 tgggggcatgaaatccttct 410
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>emb|AJ628407.1| Thylamys pusilla partial ttr gene for transthyretin, intron 1
          Length = 1656

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 136 atgaaatccttctacttttacagc 159
           |||||||||||||| |||||||||
Sbjct: 775 atgaaatccttctaattttacagc 752
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>emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chromosome 11, complete
              sequence
          Length = 193004

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    agcccataacaaagcagcag 513
              ||||||||||||||||||||
Sbjct: 189427 agcccataacaaagcagcag 189446
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>gb|AC090772.9| Homo sapiens chromosome 18, clone RP11-799B12, complete sequence
          Length = 189763

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     acaggatgttttttctttat 45
              ||||||||||||||||||||
Sbjct: 104151 acaggatgttttttctttat 104170
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>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence
          Length = 123626

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    aaacaactaatacaagaata 118
             ||||||||||||||||||||
Sbjct: 95254 aaacaactaatacaagaata 95235
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     aagcagcagaagtagacaat 524
               ||||||||||||||||||||
Sbjct: 1013330 aagcagcagaagtagacaat 1013349
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>ref|NM_001013298.1| Danio rerio prion protein, related sequence 3 (prnprs3), mRNA
          Length = 3876

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 507  gcagcagaagtagacaatga 526
            ||||||||||||||||||||
Sbjct: 1343 gcagcagaagtagacaatga 1362
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>gb|U21323.1| Caenorhabditis elegans cosmid C45G9, complete sequence
          Length = 40293

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cacgaggatccgtccaattt 245
             ||||||||||||||||||||
Sbjct: 14105 cacgaggatccgtccaattt 14086
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>ref|NM_065671.3| Caenorhabditis elegans C45G9.5 (C45G9.5) mRNA, complete cds
          Length = 1192

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cacgaggatccgtccaattt 245
           ||||||||||||||||||||
Sbjct: 906 cacgaggatccgtccaattt 887
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>emb|BX294369.6| Zebrafish DNA sequence from clone CH211-223H7 in linkage group 17,
             complete sequence
          Length = 111212

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aggatgttttttctttattt 47
             ||||||||||||||||||||
Sbjct: 99976 aggatgttttttctttattt 99957
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>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete
             sequence
          Length = 117296

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tcagaatcagattagaaagt 86
             ||||||||||||||||||||
Sbjct: 66000 tcagaatcagattagaaagt 65981
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>gb|AC017111.4|AC017111 Homo sapiens BAC clone RP11-571G1 from 13, complete sequence
          Length = 193787

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atgttttttctttatttaag 50
              ||||||||||||||||||||
Sbjct: 187038 atgttttttctttatttaag 187057
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>emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in linkage group 6,
             complete sequence
          Length = 204385

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    acacaggatgttttttctttattt 47
             |||||| |||||||||||||||||
Sbjct: 16269 acacagaatgttttttctttattt 16246
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>dbj|AB011257.1| Rice yellow stunt virus genomic RNA, complete sequence, viral
             complementary strand
          Length = 14042

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   aatacaagaatagacaatga 126
             ||||||||||||||||||||
Sbjct: 12527 aatacaagaatagacaatga 12546
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>emb|AJ333363.1|HSA333363 Homo sapiens genomic sequence surrounding NotI site, clone NL6-FD5C
          Length = 949

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 tacaagaatagacaatgaaa 128
           ||||||||||||||||||||
Sbjct: 914 tacaagaatagacaatgaaa 895
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>emb|AJ620614.1| Danio rerio mRNA for prion protein 2 (prp2 gene)
          Length = 3876

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 507  gcagcagaagtagacaatga 526
            ||||||||||||||||||||
Sbjct: 1343 gcagcagaagtagacaatga 1362
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>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete
             sequence
          Length = 187669

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    tgttttttctttatttaaga 51
             ||||||||||||||||||||
Sbjct: 27545 tgttttttctttatttaaga 27526


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,363,316
Number of Sequences: 3902068
Number of extensions: 6363316
Number of successful extensions: 133971
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 133655
Number of HSP's gapped (non-prelim): 314
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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