>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score =  101 bits (252), Expect = 9e-22
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = -1

Query: 472  GIQSPNYQCAAANTVNWQADVERCIDWEARSRRATGMTLAFLTAAANELGCPLPC 308
            GIQSP YQC AA+ +NWQADVERCI+WEA SRRATG+TLAFLTAAA ELGCPL C
Sbjct: 1106 GIQSPTYQCLAASIINWQADVERCIEWEAHSRRATGLTLAFLTAAAKELGCPLTC 1160

>GIGAN_ARATH (Q9SQI2) GIGANTEA protein|
          Length = 1173

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = -1

Query: 472  GIQSPNYQCAAANTVNWQADVERCIDWEARSRRATGMTLAFLTAAANELGCPL 314
            G+ SP+Y+   A +++W+AD++ C++WEA S  +T M   FL  AA ELGC +
Sbjct: 1117 GMNSPSYRFFNAASIDWKADIQNCLNWEAHSLLSTTMPTQFLDTAARELGCTI 1169

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 98  DCKLKSHRGSKAPYDWEHQLIYITSWGADWEWKAILEQGIN*PSCSLTMQQL 253
           DCK+KS       +DW+  L+ + S G+  EW  +     N      T QQL
Sbjct: 192 DCKMKSDELGCVRFDWDKSLLKVYS-GSSGEWLPVCSSSWNDTDSKRTCQQL 242

>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +2

Query: 98  DCKLKSHRGSKAPYDWEHQLIYITSWGADWEWKAILEQGIN*PSCSLTMQQL 253
           DCKLKS       +DW+  L+ I S G+  +W  I     N      T QQL
Sbjct: 211 DCKLKSDELGCVRFDWDKSLLKIYS-GSSHQWLPICSSNWNDSYSEKTCQQL 261

>V120_EBV (P03189) Capsid assembly protein BOLF1|
          Length = 1239

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 282 CQLQIWPCQQGRGQPSSLAAAVRKARVIPVARRLRASQSIHLSTSACQFTVFAAAHW*FG 461
           C+  + P +QGR Q ++  AA  +  V    R LRA Q+     +      F AA   F 
Sbjct: 548 CKPPLLPGEQGRRQWTAAVAAAPRTDVEAYCRSLRAGQTARADPAYVHSPFFPAAFIEFQ 607

Query: 462 LW 467
           +W
Sbjct: 608 IW 609

>MUTS_PELCD (Q3A4F1) DNA mismatch repair protein mutS|
          Length = 870

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 262 WCEQLLHGQRAGWLINPL 209
           +CEQLL G    WLINPL
Sbjct: 182 FCEQLLQGASGSWLINPL 199

>EX7L_CAUCR (Q9A649) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 505

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 213 GLISHPAR*PCSNCSHQLSSVADCQLQIWPC-QQGRGQPSSLAAAVR 350
           G+I+ P      +  H++     CQ+ +WPC  QG      ++AA+R
Sbjct: 147 GVITSPTGAVIRDILHRIRDRWPCQVLVWPCVVQGDAAAGQVSAAIR 193

>OSTA_VIBF1 (Q5E862) Organic solvent tolerance protein precursor|
          Length = 786

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 83  EHLTSDCKLKSHRGSKAPYDWEHQLIYITSWGADWEWKAI 202
           E+L  D K K  +GS+    W+H  IY   W  D E+  +
Sbjct: 293 EYLNEDDKFKD-KGSRWGVSWDHSGIYQQHWKFDVEYSKV 331


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,704,462
Number of Sequences: 219361
Number of extensions: 1094180
Number of successful extensions: 2955
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)