ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62f21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 599 bits (302), Expect = e-168 Identities = 354/366 (96%), Gaps = 5/366 (1%) Strand = Plus / Minus Query: 31 aatgggtatactgaatat-atttagagatatattaacaaaacatgcccagcaatcgcttg 89 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 aatgggtatacacaatattatttagagatatattaacaaaacatgcccagcaatcgcttg 1643 Query: 90 gatgcgatgcggacttag-gtaggtaaaacatcagatattaaaagtggcatgcttaaaag 148 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1642 gatgcgatgcggacttagtgtaggtaaaacatcagatattaaaagtggcatgcttaaaag 1583 Query: 149 gtgtaaaggcagctgccgt-cgtcgctccttgccgttgggtcgtagttcttggcattttg 207 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 gtgtaaaggcagctgccgttcgtcgctccttgccgttgggtcgtagttcttggcattttg 1523 Query: 208 gtcggtgcaaccttccggca-cgggcaaagtaccttgctgngctcctttacctccttcta 266 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 1522 gtcggtgcaaccttccggcatcgggcaaagtaccttgctgtgctcctttacctcctccta 1463 Query: 267 tgcagcaagagatggtgggtgt-gtatggagaattttctaaccgtagaaggaaccagnct 325 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 1462 tgcagcaagagatggtgggtgttgtatggagaattttctaaccgtagaaggaaccagtct 1403 Query: 326 tcatcgcatcctggttagcatcacccanagctgcctggctcatgtaggtgtcancaagct 385 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 1402 tcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagct 1343 Query: 386 gcacac 391 |||||| Sbjct: 1342 gcacac 1337
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 462 bits (233), Expect = e-127 Identities = 315/341 (92%), Gaps = 7/341 (2%) Strand = Plus / Minus Query: 57 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 110 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687 Query: 111 ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 170 | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628 Query: 171 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 230 | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || | Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568 Query: 231 gcaaagtaccttgctgngctcctttacctccttctatgcagcaagagatggtgggtgtgt 290 |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 567 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 508 Query: 291 atggagaattttctaaccgtagaaggaaccagncttcatcgcatcctggttagcatcacc 350 ||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 507 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 448 Query: 351 canagctgcctggctcatgtaggtgtcancaagctgcacac 391 || ||||||||||||||||||||||||| |||||||||||| Sbjct: 447 cagagctgcctggctcatgtaggtgtcagcaagctgcacac 407
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 462 bits (233), Expect = e-127 Identities = 315/341 (92%), Gaps = 7/341 (2%) Strand = Plus / Minus Query: 57 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 110 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537 Query: 111 ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 170 | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478 Query: 171 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 230 | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || | Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418 Query: 231 gcaaagtaccttgctgngctcctttacctccttctatgcagcaagagatggtgggtgtgt 290 |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358 Query: 291 atggagaattttctaaccgtagaaggaaccagncttcatcgcatcctggttagcatcacc 350 ||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298 Query: 351 canagctgcctggctcatgtaggtgtcancaagctgcacac 391 || ||||||||||||||||||||||||| |||||||||||| Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacac 1257
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 442 bits (223), Expect = e-121 Identities = 245/250 (98%), Gaps = 2/250 (0%) Strand = Plus / Minus Query: 12 ggtgtattggtgctttgccaa-tgggtatactgaatatatttagagatatattaacaaaa 70 ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 7771 ggtgtattggt-ctttgccaaatgggtatacacaatatatttagagatatattaacaaaa 7713 Query: 71 catgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaa 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7712 catgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaa 7653 Query: 131 aagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcg 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7652 aagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcg 7593 Query: 191 tagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgngct 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7592 tagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgct 7533 Query: 251 cctttacctc 260 |||||||||| Sbjct: 7532 cctttacctc 7523 Score = 244 bits (123), Expect = 2e-61 Identities = 132/136 (97%) Strand = Plus / Minus Query: 256 acctccttctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 315 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296 Query: 316 gaaccagncttcatcgcatcctggttagcatcacccanagctgcctggctcatgtaggtg 375 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236 Query: 376 tcancaagctgcacac 391 ||| |||||||||||| Sbjct: 7235 tcagcaagctgcacac 7220
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 430 bits (217), Expect = e-117 Identities = 225/228 (98%) Strand = Plus / Minus Query: 31 aatgggtatactgaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 90 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333 Query: 91 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273 Query: 151 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213 Query: 211 ggtgcaaccttccggcacgggcaaagtaccttgctgngctcctttacc 258 |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 1165 Score = 153 bits (77), Expect = 5e-34 Identities = 83/86 (96%) Strand = Plus / Minus Query: 306 accgtagaaggaaccagncttcatcgcatcctggttagcatcacccanagctgcctggct 365 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108 Query: 366 catgtaggtgtcancaagctgcacac 391 ||||||||||||| |||||||||||| Sbjct: 1107 catgtaggtgtcagcaagctgcacac 1082
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 327 bits (165), Expect = 2e-86 Identities = 289/328 (88%), Gaps = 9/328 (2%) Strand = Plus / Minus Query: 71 catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 124 ||||||||||| ||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534 Query: 125 -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 183 || | |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474 Query: 184 tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 243 ||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||| Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414 Query: 244 ctgngctcctttacctccttctatgcagcaagagatggtgggtgtgtatggagaattttc 303 || ||||||||||||||| ||||||||||||||||||||| ||||||| ||| | ||| Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgg--gtgtatgaagagtgttc 1356 Query: 304 taaccgtagaaggaaccagncttcatcgcatcctggttagcatcacccanagctgcctgg 363 ||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||| Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296 Query: 364 ctcatgtaggtgtcancaagctgcacac 391 |||||||| ||||| |||||||||||| Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacac 1268
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 188 bits (95), Expect = 9e-45 Identities = 104/108 (96%) Strand = Plus / Minus Query: 284 ggtgtgtatggagaattttctaaccgtagaaggaaccagncttcatcgcatcctggttag 343 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249 Query: 344 catcacccanagctgcctggctcatgtaggtgtcancaagctgcacac 391 ||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacac 201
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 170 bits (86), Expect = 2e-39 Identities = 118/129 (91%) Strand = Plus / Minus Query: 130 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 189 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430 Query: 190 gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgngc 249 | |||||||||||| ||||||| |||||||||||||| |||||||| ||||| || || Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370 Query: 250 tcctttacc 258 ||||||||| Sbjct: 1369 tcctttacc 1361 Score = 113 bits (57), Expect = 4e-22 Identities = 78/86 (90%) Strand = Plus / Minus Query: 306 accgtagaaggaaccagncttcatcgcatcctggttagcatcacccanagctgcctggct 365 ||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||| Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304 Query: 366 catgtaggtgtcancaagctgcacac 391 |||||| ||||| |||||||||||| Sbjct: 1303 catgtaagtgtccgcaagctgcacac 1278
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 157 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112 Query: 217 accttccggcacggg 231 || |||||||||| Sbjct: 112113 tcccgccggcacggg 112127 Score = 50.1 bits (25), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 tctaaccgtagaaggaaccagncttcat 329 ||||||||||||||||||||| |||||| Sbjct: 108306 tctaaccgtagaaggaaccagtcttcat 108333
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 157 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989 Query: 217 accttccggcacggg 231 || |||||||||| Sbjct: 33990 tcccgccggcacggg 34004 Score = 50.1 bits (25), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 tctaaccgtagaaggaaccagncttcat 329 ||||||||||||||||||||| |||||| Sbjct: 30183 tctaaccgtagaaggaaccagtcttcat 30210
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1316 aaccgtagaaggaaccagtcttcat 1292
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336 Score = 40.1 bits (20), Expect = 5.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 307 ccgtagaaggaaccagncttcat 329 |||||||||||||||| |||||| Sbjct: 1309 ccgtagaaggaaccagtcttcat 1287
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 157 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251 Query: 217 accttccggcacggg 231 || |||||||||| Sbjct: 28307252 tcccgccggcacggg 28307266 Score = 50.1 bits (25), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 tctaaccgtagaaggaaccagncttcat 329 ||||||||||||||||||||| |||||| Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcat 28303472
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggca 1420 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1310 aaccgtagaaggaaccagtcttcat 1286
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggca 1458 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1348 aaccgtagaaggaaccagtcttcat 1324
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggca 1457 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1347 aaccgtagaaggaaccagtcttcat 1323
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggca 1241 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1131 aaccgtagaaggaaccagtcttcat 1107
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 157 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700 Query: 217 accttccggcacggg 231 || |||||||||| Sbjct: 28289701 tcccgccggcacggg 28289715 Score = 50.1 bits (25), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 tctaaccgtagaaggaaccagncttcat 329 ||||||||||||||||||||| |||||| Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcat 28285921
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggca 1462 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1352 aaccgtagaaggaaccagtcttcat 1328
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371 Score = 40.1 bits (20), Expect = 5.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 307 ccgtagaaggaaccagncttcat 329 |||||||||||||||| |||||| Sbjct: 1344 ccgtagaaggaaccagtcttcat 1322
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small isoform precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 93 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 145 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 204 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 93 aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34 Query: 205 ttggtcggtgcaaccttccggcacgggca 233 |||||||||||||||||||||| |||| Sbjct: 33 agggtcggtgcaaccttccggcacaggca 5
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 117 bits (59), Expect = 3e-23 Identities = 87/95 (91%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggca 1469 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 1359 aaccgtagaaggaaccagtcttcat 1335
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence Length = 234 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 |||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||| |||||||||||||| |||| Sbjct: 75 ggcaacagggtcgggtcaaccttccggcacaggca 41
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728 Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233 |||| |||||||||||||||||||||| |||| Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 149 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391 Query: 209 tcggtgcaaccttc 222 ||||| |||||||| Sbjct: 1390 tcggtacaaccttc 1377
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 149 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216 Query: 209 tcggtgcaaccttc 222 ||||| |||||||| Sbjct: 1215 tcggtacaaccttc 1202
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 149 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090 Query: 209 tcggtgcaaccttc 222 ||||| |||||||| Sbjct: 1089 tcggtacaaccttc 1076
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 149 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246 Query: 209 tcggtgcaaccttc 222 ||||| |||||||| Sbjct: 1245 tcggtacaaccttc 1232
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 44.1 bits (22), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aaccgtagaaggaaccagncttcat 329 |||||||||||||||||| |||||| Sbjct: 565 aaccgtagaaggaaccagtcttcat 541
>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence Length = 153155 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 aatatatttagagatatattaa 65 |||||||||||||||||||||| Sbjct: 67942 aatatatttagagatatattaa 67963
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence Length = 177245 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tatatttagagatatattaac 66 ||||||||||||||||||||| Sbjct: 12315 tatatttagagatatattaac 12335
>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence Length = 98660 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tatatttagagatatattaac 66 ||||||||||||||||||||| Sbjct: 66387 tatatttagagatatattaac 66367
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaacatcagatattaaaagtg 135 ||||||||||||||||||||| Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 atgcagcaagagatggtgggt 286 ||||||||||||||||||||| Sbjct: 63530 atgcagcaagagatggtgggt 63550
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaacatcagatattaaaagtg 135 ||||||||||||||||||||| Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aaacatcagatattaaaagtg 135 ||||||||||||||||||||| Sbjct: 114403 aaacatcagatattaaaagtg 114423
>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence Length = 105452 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tatatttagagatatattaac 66 ||||||||||||||||||||| Sbjct: 6217 tatatttagagatatattaac 6197
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctgaatatatttagagatat 60 |||||||||||||||||||| Sbjct: 1465439 ctgaatatatttagagatat 1465458
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gcatcctggttagcatcacc 350 |||||||||||||||||||| Sbjct: 1355 gcatcctggttagcatcacc 1336
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tcagatattaaaagtggcat 139 |||||||||||||||||||| Sbjct: 141058 tcagatattaaaagtggcat 141077
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tcagatattaaaagtggcat 139 |||||||||||||||||||| Sbjct: 142564 tcagatattaaaagtggcat 142583
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tcagatattaaaagtggcat 139 |||||||||||||||||||| Sbjct: 95930 tcagatattaaaagtggcat 95911
>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166149 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aatatatttagagatatatt 63 |||||||||||||||||||| Sbjct: 30454 aatatatttagagatatatt 30473
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, section 128 of 469 of the complete genome Length = 11388 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 148 ggtgtaaaggcagctgccgtcgtcgctc 175 |||||| |||| |||||||||||||||| Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 Length = 504369 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 aaacatgcccagcaatcgcttgga 91 |||||||||||||||||| ||||| Sbjct: 41692 aaacatgcccagcaatcgattgga 41715
>gb|AC093742.3| Homo sapiens BAC clone RP11-24M8 from 4, complete sequence Length = 114455 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 actgaatatatttagagatatattaaca 67 |||| ||||||||||| ||||||||||| Sbjct: 102508 actggatatatttagatatatattaaca 102481
>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence Length = 154382 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 atactgaatatatttagagatatattaa 65 |||||||||||||||| |||||| |||| Sbjct: 32005 atactgaatatatttaaagatatgttaa 32032
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tggcatgcttaaaaggtgta 153 |||||||||||||||||||| Sbjct: 78235 tggcatgcttaaaaggtgta 78254
>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle) (predicted) (Lmod1_predicted), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 5.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 240 cttgctgngctcctttacctcct 262 ||||||| ||||||||||||||| Sbjct: 648 cttgctgggctcctttacctcct 626
>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18, complete sequence Length = 174701 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aatatatttagagatatatt 63 |||||||||||||||||||| Sbjct: 62504 aatatatttagagatatatt 62485
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 atcagatattaaaagtggcatgct 142 ||||||||||||||||| |||||| Sbjct: 127875 atcagatattaaaagtgccatgct 127852 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,798,139 Number of Sequences: 3902068 Number of extensions: 2798139 Number of successful extensions: 57353 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57140 Number of HSP's gapped (non-prelim): 189 length of query: 391 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 369 effective length of database: 17,147,199,772 effective search space: 6327316715868 effective search space used: 6327316715868 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
