Clone Name | rbah62f03 |
---|---|
Clone Library Name | barley_pub |
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/21 (85%), Positives = 18/21 (85%) Frame = -3 Query: 355 LVLVQNFXAGKALPDCKEXXQ 293 LVLVQNF AGKALPDCKE Q Sbjct: 495 LVLVQNFLAGKALPDCKECEQ 515
>MT2C_RABIT (P80290) Metallothionein-2C (MT-2C) (Metallothionein-IIC) (MT-IIC)| Length = 62 Score = 32.3 bits (72), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXC-KTFFSFAXPVXILCSQGALC 327 SCT +N TC+ C CT C K+ S P C+QG +C Sbjct: 13 SCTCANSCTCKACKCT--SCKKSCCSCCPPGCAKCAQGCIC 51
>MT2A_RABIT (P18055) Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)| Length = 62 Score = 32.3 bits (72), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXC-KTFFSFAXPVXILCSQGALC 327 SCT +N TC+ C CT C K+ S P C+QG +C Sbjct: 13 SCTCANSCTCKACKCT--SCKKSCCSCCPPGCAKCAQGCIC 51
>MT2H_BOVIN (P55943) Metallothionein-II, hippocampal (MT-2)| Length = 61 Score = 31.2 bits (69), Expect = 0.65 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT +N TC+ C C CK PV C+QG +C Sbjct: 12 SCTCANSCTCKACKCA--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT1G_HUMAN (P13640) Metallothionein-1G (MT-1G) (Metallothionein-IG) (MT-IG)| (Metallothionein-1K) (MT-1K) Length = 62 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +1 Query: 205 VSCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 VSCT ++ C+ C CT CK PV C+QG +C Sbjct: 12 VSCTCASSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 51
>MT1_CERAE (P02797) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +1 Query: 205 VSCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 VSCT ++ C+ C CT CK PV C+QG +C Sbjct: 11 VSCTCADSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCVC 50
>MT1I_HUMAN (P80295) Metallothionein-1I (MT-1I) (Metallothionein-II)| Length = 61 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = +1 Query: 205 VSCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 VSCT + C+ C CT CK PV C+QG +C Sbjct: 11 VSCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT1F_PIG (P79378) Metallothionein-1F (MT-1F) (Metallothionein-IF) (MT-IF)| Length = 61 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + TC+ C CT CK P C+QG +C Sbjct: 12 SCTCAGSCTCKACRCT--SCKKSCCSCCPAGCAKCAQGCIC 50
>MT1E_PIG (P79431) Metallothionein-1E (MT-1E) (Metallothionein-IE) (MT-IE)| Length = 61 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SC+ + TC+ C CT CK PV C+QG +C Sbjct: 12 SCSCAGSCTCKACRCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT1_RAT (P02803) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXI-LCSQGALC 327 SCT S+ C+ C CT CK PV C+QG +C Sbjct: 12 SCTCSSSCGCKNCKCT--SCKKSCCSCCPVGCSKCAQGCVC 50
>MT1F_HUMAN (P04733) Metallothionein-1F (MT-1F) (Metallothionein-IF) (MT-IF)| Length = 61 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = +1 Query: 205 VSCTESNDTTCETCWCTIFXCKTFFSFAXPVXI-LCSQGALC 327 VSCT + C+ C CT CK PV C+QG +C Sbjct: 11 VSCTCAGSCKCKECKCT--SCKKSCCSCCPVGCSKCAQGCVC 50
>YR871_MIMIV (Q5UP41) Hypothetical protein R871| Length = 561 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -3 Query: 214 YKKQAKSSKVRYRNPSSTHALRR 146 +KK+ KS K RYR+PSS +L R Sbjct: 173 HKKKDKSHKKRYRSPSSDRSLSR 195
>Y751_METJA (Q58161) Hypothetical protein MJ0751| Length = 278 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -3 Query: 241 FHRLYHLIQYKKQAKSSKVRYRNPSSTHALRRPCNCR 131 F +L I+YK + V Y NPS T L C C+ Sbjct: 192 FSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCK 228
>ASLB_ECOLI (P25550) Probable arylsulfatase-activating protein aslB| Length = 411 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 Query: 72 CSYLTNYTIHFPIYMKAFADLQLHG 146 C+ Y H P Y+KA ADL HG Sbjct: 371 CAGYQRYFRHLPPYLKAMADLLAHG 395
>MT2_MESAU (P17808) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SC+ S C+ C CT CK PV CSQG +C Sbjct: 12 SCSCSGSCKCKECKCT--TCKKSCCSCCPVGCAKCSQGCVC 50
>MT1_MOUSE (P02802) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXI-LCSQGALC 327 SCT ++ C+ C CT CK PV C+QG +C Sbjct: 12 SCTCTSSCACKNCKCT--SCKKSCCSCCPVGCSKCAQGCVC 50
>MT2_PONPY (Q5NVS0) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT2_MACFA (P68303) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT2_HUMAN (P02795) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| (Metallothionein-2A) Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT2_CERAE (P68304) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT2_CANFA (Q9XST5) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECRCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT2A_PIG (P79379) Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKDCKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>MT1_CANFA (O19000) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCIC 50
>NH197_CAEEL (O17931) Nuclear hormone receptor family member nhr-197| Length = 340 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Frame = +3 Query: 30 FGRHQYCNMPFWHRCSYLTNYTIHFPIYMKA----FADLQLHGLRSAWVDDGFL 179 F R Y N+ F RC + N TIHF I+ K F + G+ A ++DG + Sbjct: 27 FHRTVYKNLLF--RCKRIQNCTIHFKIFPKCRACRFQKCLIVGMTLAPLNDGIV 78
>NLTP6_ARATH (Q9LDB4) Nonspecific lipid-transfer protein 6 precursor (LTP 6)| Length = 113 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/63 (23%), Positives = 29/63 (46%) Frame = +1 Query: 154 VHGLMMGFCI*LYLILLVSCTESNDTTCETCWCTIFXCKTFFSFAXPVXILCSQGALCLR 333 + L++ C L+L + C E+ +C T ++ C ++ + PV LC G L+ Sbjct: 1 MRSLLLAVC----LVLALHCGEAA-VSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLK 55 Query: 334 XNS 342 + Sbjct: 56 SQA 58
>PAQR9_HUMAN (Q6ZVX9) Progestin and adipoQ receptor family member 9 (Progestin| and adipoQ receptor family member IX) Length = 377 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/74 (24%), Positives = 31/74 (41%) Frame = +1 Query: 88 ITPYTFLSI*KHLLTCSYMVCGVHGLMMGFCI*LYLILLVSCTESNDTTCETCWCTIFXC 267 +TPY + H+ C+ ++ L++ L + V+C +S T WCT Sbjct: 188 MTPYLQQRLGWHV-DCTRLIAAYRALVLPVAFVLAVACTVACCKSR-----TDWCTYPFA 241 Query: 268 KTFFSFAXPVXILC 309 F F P+ + C Sbjct: 242 LRTFVFVMPLSMAC 255
>MT1M_HUMAN (Q8N339) Metallothionein-1M (MT-1M) (Metallothionein-IM) (MT-IM)| Length = 61 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +1 Query: 205 VSCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 VSC + TC+ C CT CK PV C+ G +C Sbjct: 11 VSCACTGSCTCKECKCT--SCKKSCCSCCPVGCAKCAHGCVC 50
>MT1E_HUMAN (P04732) Metallothionein-1E (MT-1E) (Metallothionein-IE) (MT-IE)| Length = 61 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SCT + C+ C CT CK PV C+QG +C Sbjct: 12 SCTCAGSCKCKECKCT--SCKKSCCSCCPVGCAKCAQGCVC 50
>MT1D_PIG (P79377) Metallothionein-1D (MT-1D) (Metallothionein-ID) (MT-ID)| Length = 61 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SC+ + TC+ C CT CK P C+QG +C Sbjct: 12 SCSCATSCTCKACRCT--SCKKSCCSCCPAGCAKCAQGCIC 50
>MT1C_PIG (P79376) Metallothionein-1C (MT-1C) (Metallothionein-IC) (MT-IC)| Length = 61 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SC+ + TC+ C CT CK P C+QG +C Sbjct: 12 SCSCAGSCTCKACRCT--SCKKSCCSCCPAGCARCAQGCIC 50
>MT1A_PIG (P49068) Metallothionein-1A (MT-1A) (Metallothionein-IA) (MT-IA)| Length = 61 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXIL-CSQGALC 327 SC+ + TC+ C CT CK P C+QG +C Sbjct: 12 SCSCAGSCTCKACRCT--SCKKSCCSCCPAGCARCAQGCIC 50
>MT3_HORSE (P37360) Metallothionein-3 (MT-3) (Metallothionein-III) (MT-III)| (Growth inhibitory factor) (GIF) Length = 68 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXI-LCSQGALCLRXNSGQAQA 357 SCT S + CE C CT CK P C++ +C +A+A Sbjct: 13 SCTCSGECKCEGCKCT--SCKKSCCSCCPAECEKCAKDCVCKGGEGAEAEA 61
>MT1_CRIGR (P02804) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 208 SCTESNDTTCETCWCTIFXCKTFFSFAXPVXI-LCSQGALC 327 +CT S+ C+ C CT CK PV C+QG +C Sbjct: 12 TCTCSSSCGCKDCKCT--SCKKSCCSCCPVGCSKCAQGCVC 50
>VE1_HPV40 (P36727) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 647 Score = 27.3 bits (59), Expect = 9.4 Identities = 9/26 (34%), Positives = 19/26 (73%) Frame = -2 Query: 170 IINPCTPQTM*LQVSKCFHIDRKVYG 93 +I+ C+P+T +++ KC ++ K+YG Sbjct: 185 VIDHCSPRTQLIELFKCKDLNAKLYG 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,885,466 Number of Sequences: 219361 Number of extensions: 806799 Number of successful extensions: 1874 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1873 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)