ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62g20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, m... 416 e-113
2gb|AY104328.1| Zea mays PCO078649 mRNA sequence 416 e-113
3ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predic... 398 e-108
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 398 e-108
5dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 398 e-108
6dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 398 e-108
7dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
8dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
9dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
10ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predic... 307 2e-80
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 307 2e-80
12dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
13emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 307 2e-80
14emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 307 2e-80
15dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA... 291 1e-75
16dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
17gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 74 5e-10
18gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 74 5e-10
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
20gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial... 70 7e-09
21ref|NM_190839.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
22gb|AY836649.1| Uncultured bacterium clone BD8802 pectate lyase g... 48 0.026
23gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 44 0.41
24gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 44 0.41
25ref|NM_116941.1| Arabidopsis thaliana unknown protein AT4G08710 ... 42 1.6
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
27emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, comp... 42 1.6
28gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.6
29emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, ... 42 1.6
30emb|AL161813.1|ATT32A17 Arabidopsis thaliana DNA chromosome 4, B... 42 1.6
31gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.6
32ref|NM_001027047.1| Caenorhabditis elegans F59B10.4a (F59B10.4) ... 42 1.6
33ref|NM_001027048.1| Caenorhabditis elegans F59B10.4b (F59B10.4) ... 42 1.6
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
38dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
40dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42dbj|AK121618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
43gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
44emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311... 42 1.6
45emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
46ref|NM_126075.4| Arabidopsis thaliana transcription factor AT5G6... 40 6.4
47gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.4
48gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.4
49gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.4
50gb|AY772449.1| Rhodococcus equi strain 103+ heat shock protein (... 40 6.4
51ref|XM_953430.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
52ref|XM_330473.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
53gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.4
54gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome... 40 6.4
55ref|XM_656577.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.4
56ref|XM_567952.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.4
57ref|XM_569485.1| Cryptococcus neoformans var. neoformans JEC21 t... 40 6.4
58gb|AF043697.2| Caenorhabditis elegans cosmid F56C11, complete se... 40 6.4
59ref|XM_790314.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.4
60gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.4
61emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.4
62emb|AJ318872.1|GGN318872 Gnetum gnemon partial mRNA for putative... 40 6.4
63gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 6.4
64gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map... 40 6.4
65gb|AY062538.1| Arabidopsis thaliana SCARECROW gene regulator (At... 40 6.4
66gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.4
67gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosom... 40 6.4
68dbj|AK035292.1| Mus musculus adult male urinary bladder cDNA, RI... 40 6.4
69gb|AY150563.1| Aspergillus nidulans SipA3 gene, complete cds 40 6.4
70dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 6.4
71emb|BX830446.1|CNS0A04D Arabidopsis thaliana Full-length cDNA Co... 40 6.4
72emb|BX832347.1|CNS09ZLX Arabidopsis thaliana Full-length cDNA Co... 40 6.4
73gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, c... 40 6.4
74gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, ... 40 6.4
75gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
76gb|BT002580.1| Arabidopsis thaliana SCARECROW gene regulator (At... 40 6.4
77gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decar... 40 6.4
78dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.4
79dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.4
80emb|AJ519722.2|YEN519722 Yersinia enterocolitica partial cryptic... 40 6.4
81dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.4
82emb|AJ347753.1|BCE347753 Burkholderia cepacia bcrA gene for mult... 40 6.4
83ref|XM_310477.2| Anopheles gambiae str. PEST ENSANGP00000019255 ... 40 6.4
84emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.4
85emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.4
86gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.4 
>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1024

 Score =  416 bits (210), Expect = e-113
 Identities = 282/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 162 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 221
           ||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||| |
Sbjct: 799 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 740

                                                                       
Query: 222 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 281
           ||||||||||  ||||||||||| |||||| ||||||||||||| |||||||||||||||
Sbjct: 739 acgttgaagatgacgagcggctctatctcgttgatgggcacccccgtctcgatgttgagc 680

                                                                       
Query: 282 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatccccagc 341
           ||||||||||||||||| |||||||||||||| ||||||||||||||||| |  ||||||
Sbjct: 679 tgcgccagcgcgcccttccccgtgatgatctcgccgatgatggagaaggccacgcccagc 620

                                                                       
Query: 342 tgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacctccc 401
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 619 tgcgccatccgccccacgaacagctcgttcgacttggtgaacccgaacagcggccctccc 560

                                                                       
Query: 402 tcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcgagg 461
           |||||||||||||||||   ||||||||| ||||||||   |||||||||||||||||||
Sbjct: 559 tcgctgaggccgagggcgccgcggaagcccttgccgggttggatgacggccttgtcgagg 500

                 
Query: 462 ccggtg 467
           ||||||
Sbjct: 499 ccggtg 494
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>gb|AY104328.1| Zea mays PCO078649 mRNA sequence
          Length = 1252

 Score =  416 bits (210), Expect = e-113
 Identities = 282/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 162 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 221
           ||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||| |
Sbjct: 989 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 930

                                                                       
Query: 222 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 281
           ||||||||||  ||||||||||| |||||| ||||||||||||| |||||||||||||||
Sbjct: 929 acgttgaagatgacgagcggctctatctcgttgatgggcacccccgtctcgatgttgagc 870

                                                                       
Query: 282 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatccccagc 341
           ||||||||||||||||| |||||||||||||| ||||||||||||||||| |  ||||||
Sbjct: 869 tgcgccagcgcgcccttccccgtgatgatctcgccgatgatggagaaggccacgcccagc 810

                                                                       
Query: 342 tgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacctccc 401
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 809 tgcgccatccgccccacgaacagctcgttcgacttggtgaacccgaacagcggccctccc 750

                                                                       
Query: 402 tcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcgagg 461
           |||||||||||||||||   ||||||||| ||||||||   |||||||||||||||||||
Sbjct: 749 tcgctgaggccgagggcgccgcggaagcccttgccgggttggatgacggccttgtcgagg 690

                 
Query: 462 ccggtg 467
           ||||||
Sbjct: 689 ccggtg 684
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>ref|NM_190784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                       
Query: 159 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 741

                                                                       
Query: 219 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
           |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 740 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 681

                                                                       
Query: 279 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
           |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 680 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 621

                                                                       
Query: 339 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
           |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 620 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 561

                                                                       
Query: 399 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
           |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 560 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 501

                
Query: 459 aggcc 463
           |||||
Sbjct: 500 aggcc 496



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 351 cgccccacgaacagctcgttcgacttggtgaacccga 387
           ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 293 cgcccgacgaacagctcgttctccttggtgaaaccga 257
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                            
Query: 159      tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
                ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37692662 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 37692603

                                                                            
Query: 219      acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
                |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 37692602 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 37692543

                                                                            
Query: 279      agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
                |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 37692542 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 37692483

                                                                            
Query: 339      agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
                |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 37692482 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 37692423

                                                                            
Query: 399      ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
                |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 37692422 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 37692363

                     
Query: 459      aggcc 463
                |||||
Sbjct: 37692362 aggcc 37692358



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                            
Query: 225      ttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagctgc 284
                |||||||| | ||||||||||||||  |||||||| |  |||||||| ||||||||||||
Sbjct: 33384238 ttgaagaggatgagcggctcgatctaactgatggggatgccggtctcaatgttgagctgc 33384179

                                      
Query: 285      gccagcgcgcccttgcccgtga 306
                 |||| ||||||||||| ||||
Sbjct: 33384178 cccagggcgcccttgccggtga 33384157



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 351      cgccccacgaacagctcgttcgacttggtgaacccga 387
                ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 37690776 cgcccgacgaacagctcgttctccttggtgaaaccga 37690740



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 83       acaaacaggcaaagcacgtacgtac 107
                |||||| ||||||||||||||||||
Sbjct: 29256942 acaaaccggcaaagcacgtacgtac 29256918
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                          
Query: 159    tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
              ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153136 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 153077

                                                                          
Query: 219    acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
              |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 153076 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 153017

                                                                          
Query: 279    agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
              |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 153016 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 152957

                                                                          
Query: 339    agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
              |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 152956 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 152897

                                                                          
Query: 399    ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
              |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 152896 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 152837

                   
Query: 459    aggcc 463
              |||||
Sbjct: 152836 aggcc 152832



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 351    cgccccacgaacagctcgttcgacttggtgaacccga 387
              ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 151250 cgcccgacgaacagctcgttctccttggtgaaaccga 151214
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>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                         
Query: 159   tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
             ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20963 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 20904

                                                                         
Query: 219   acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
             |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 20903 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 20844

                                                                         
Query: 279   agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
             |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 20843 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 20784

                                                                         
Query: 339   agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
             |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 20783 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 20724

                                                                         
Query: 399   ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
             |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 20723 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 20664

                  
Query: 459   aggcc 463
             |||||
Sbjct: 20663 aggcc 20659



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 351   cgccccacgaacagctcgttcgacttggtgaacccga 387
             ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 19077 cgcccgacgaacagctcgttctccttggtgaaaccga 19041
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>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full
           insert sequence
          Length = 1055

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                       
Query: 159 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826

                                                                       
Query: 219 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
           |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 766

                                                                       
Query: 279 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
           |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 765 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 706

                                                                       
Query: 339 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
           |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 705 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 646

                                                                       
Query: 399 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
           |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 645 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 586

                
Query: 459 aggcc 463
           |||||
Sbjct: 585 aggcc 581



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 351 cgccccacgaacagctcgttcgacttggtgaacccga 387
           ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 378 cgcccgacgaacagctcgttctccttggtgaaaccga 342
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>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full
           insert sequence
          Length = 1057

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                       
Query: 159 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 829

                                                                       
Query: 219 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
           |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 828 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 769

                                                                       
Query: 279 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
           |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 768 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 709

                                                                       
Query: 339 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
           |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 708 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 649

                                                                       
Query: 399 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
           |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 648 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 589

                
Query: 459 aggcc 463
           |||||
Sbjct: 588 aggcc 584



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 351 cgccccacgaacagctcgttcgacttggtgaacccga 387
           ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 381 cgcccgacgaacagctcgttctccttggtgaaaccga 345
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>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full
           insert sequence
          Length = 1064

 Score =  398 bits (201), Expect = e-108
 Identities = 279/305 (91%)
 Strand = Plus / Minus

                                                                       
Query: 159 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 218
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826

                                                                       
Query: 219 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 278
           |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 766

                                                                       
Query: 279 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 338
           |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || 
Sbjct: 765 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 706

                                                                       
Query: 339 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 398
           |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || 
Sbjct: 705 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 646

                                                                       
Query: 399 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 458
           |||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 645 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 586

                
Query: 459 aggcc 463
           |||||
Sbjct: 585 aggcc 581



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 351 cgccccacgaacagctcgttcgacttggtgaacccga 387
           ||||| |||||||||||||||  ||||||||| ||||
Sbjct: 378 cgcccgacgaacagctcgttctccttggtgaaaccga 342
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>ref|XM_474468.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 747

 Score =  307 bits (155), Expect = 2e-80
 Identities = 230/255 (90%)
 Strand = Plus / Minus

                                                                       
Query: 155 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 741 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 682

                                                                       
Query: 215 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
           ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 681 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 622

                                                                       
Query: 275 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
           |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 621 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 562

                                                                       
Query: 335 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
           |||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 561 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 502

                          
Query: 395 acctccctcgctgag 409
            || |||||||||||
Sbjct: 501 gccaccctcgctgag 487



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 353 ccccacgaacagctcgttcgacttggtgaacccga 387
           |||||||||||||||||||  ||||||||||||||
Sbjct: 234 ccccacgaacagctcgttctccttggtgaacccga 200
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  307 bits (155), Expect = 2e-80
 Identities = 230/255 (90%)
 Strand = Plus / Minus

                                                                            
Query: 155      gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
                ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 35373095 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 35373036

                                                                            
Query: 215      gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
                ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 35373035 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 35372976

                                                                            
Query: 275      gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
                |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 35372975 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 35372916

                                                                            
Query: 335      ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
                |||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 35372915 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 35372856

                               
Query: 395      acctccctcgctgag 409
                 || |||||||||||
Sbjct: 35372855 gccaccctcgctgag 35372841



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 353      ccccacgaacagctcgttcgacttggtgaacccga 387
                |||||||||||||||||||  ||||||||||||||
Sbjct: 35372588 ccccacgaacagctcgttctccttggtgaacccga 35372554
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>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full
           insert sequence
          Length = 1116

 Score =  307 bits (155), Expect = 2e-80
 Identities = 230/255 (90%)
 Strand = Plus / Minus

                                                                       
Query: 155 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 905 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 846

                                                                       
Query: 215 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
           ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 845 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 786

                                                                       
Query: 275 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
           |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 785 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 726

                                                                       
Query: 335 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
           |||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 725 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 666

                          
Query: 395 acctccctcgctgag 409
            || |||||||||||
Sbjct: 665 gccaccctcgctgag 651



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 353 ccccacgaacagctcgttcgacttggtgaacccga 387
           |||||||||||||||||||  ||||||||||||||
Sbjct: 398 ccccacgaacagctcgttctccttggtgaacccga 364
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>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete
            sequence
          Length = 32686

 Score =  307 bits (155), Expect = 2e-80
 Identities = 230/255 (90%)
 Strand = Plus / Minus

                                                                        
Query: 155  gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
            ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 4925 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 4866

                                                                        
Query: 215  gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
            ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 4865 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 4806

                                                                        
Query: 275  gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
            |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 4805 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 4746

                                                                        
Query: 335  ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
            |||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 4745 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 4686

                           
Query: 395  acctccctcgctgag 409
             || |||||||||||
Sbjct: 4685 gccaccctcgctgag 4671



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 353  ccccacgaacagctcgttcgacttggtgaacccga 387
            |||||||||||| ||||||  ||||||||||||||
Sbjct: 4418 ccccacgaacagttcgttctccttggtgaacccga 4384
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score =  307 bits (155), Expect = 2e-80
 Identities = 230/255 (90%)
 Strand = Plus / Minus

                                                                          
Query: 155    gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
              ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 168939 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 168880

                                                                          
Query: 215    gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
              ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 168879 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 168820

                                                                          
Query: 275    gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
              |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 168819 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 168760

                                                                          
Query: 335    ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
              |||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 168759 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 168700

                             
Query: 395    acctccctcgctgag 409
               || |||||||||||
Sbjct: 168699 gccaccctcgctgag 168685



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 353    ccccacgaacagctcgttcgacttggtgaacccga 387
              |||||||||||||||||||  ||||||||||||||
Sbjct: 168432 ccccacgaacagctcgttctccttggtgaacccga 168398
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>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa
           protein of photosystem II precursor, complete cds
          Length = 1108

 Score =  291 bits (147), Expect = 1e-75
 Identities = 228/255 (89%)
 Strand = Plus / Minus

                                                                       
Query: 155 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 214
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 889 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 830

                                                                       
Query: 215 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 274
           ||||| || ||||||||| | |||||||||||||||| ||||||| || |||||||||||
Sbjct: 829 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 770

                                                                       
Query: 275 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
           |||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||
Sbjct: 769 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 710

                                                                       
Query: 335 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 394
           |||||  ||||| || || |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 709 ccccacgtgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 650

                          
Query: 395 acctccctcgctgag 409
            || |||||||||||
Sbjct: 649 gccaccctcgctgag 635



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 353 ccccacgaacagctcgttcgacttggtgaacccga 387
           |||||||||||||||||||  ||||||||||||||
Sbjct: 382 ccccacgaacagctcgttctccttggtgaacccga 348
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415A04
          Length = 160669

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                         
Query: 225   ttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagctgc 284
             |||||||| | ||||||||||||||  |||||||| |  |||||||| ||||||||||||
Sbjct: 60404 ttgaagaggatgagcggctcgatctaactgatggggatgccggtctcaatgttgagctgc 60345

                                   
Query: 285   gccagcgcgcccttgcccgtga 306
              |||| ||||||||||| ||||
Sbjct: 60344 cccagggcgcccttgccggtga 60323
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02,
              complete sequence
          Length = 156649

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                          
Query: 222    acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 281
              ||||||||||| ||||||| ||| |||||  ||| ||| |  | ||||||||||||||||
Sbjct: 154598 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 154539

                                                                   
Query: 282    tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
              ||||  || ||  ||||||| |||| |||||| | ||||||||||||||||||
Sbjct: 154538 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 154486



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 440    ggcgatgacggccttgtcgaggcc 463
              ||||||||||||||||||||||||
Sbjct: 154491 ggcgatgacggccttgtcgaggcc 154468
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                         
Query: 222   acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 281
             ||||||||||| ||||||| ||| |||||  ||| ||| |  | ||||||||||||||||
Sbjct: 13474 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 13415

                                                                  
Query: 282   tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
             ||||  || ||  ||||||| |||| |||||| | ||||||||||||||||||
Sbjct: 13414 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 13362



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 440   ggcgatgacggccttgtcgaggcc 463
             ||||||||||||||||||||||||
Sbjct: 13367 ggcgatgacggccttgtcgaggcc 13344
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                           
Query: 222     acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 281
               ||||||||||| ||||||| ||| |||||  ||| ||| |  | ||||||||||||||||
Sbjct: 4644131 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 4644072

                                                                    
Query: 282     tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 334
               ||||  || ||  ||||||| |||| |||||| | ||||||||||||||||||
Sbjct: 4644071 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 4644019



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 440     ggcgatgacggccttgtcgaggcc 463
               ||||||||||||||||||||||||
Sbjct: 4644024 ggcgatgacggccttgtcgaggcc 4644001
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>gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial cds; chloroplast
          Length = 479

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggctcgatctcgctgatgggcaccccggtctcgatgttgagctgcgccagcgcgcccttg 299
           |||||||| |||||||||||||| || ||||||||||| | ||| ||||  || ||||| 
Sbjct: 437 ggctcgatgtcgctgatgggcacgcctgtctcgatgtttaactgagccaaagcacccttc 378

                                                                       
Query: 300 cccgtgatgatctccccgatgatggagaaggcgatccccagctgcgccagccgccccacg 359
           || ||||||| ||| |||||||  ||||| || || || || ||||| || || ||||||
Sbjct: 377 ccggtgatgacctctccgatgagtgagaacgcaataccgagttgcgctagtcgtcccacg 318

                      
Query: 360 aacagctcgtt 370
           || ||||||||
Sbjct: 317 aagagctcgtt 307
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>ref|NM_190839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1878

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 264  ccggtctcgatgttgagctgcgccagcgcgcccttgcccgtga 306
            |||||||| |||||||||||| |||| ||||||||||| ||||
Sbjct: 1211 ccggtctcaatgttgagctgccccagggcgcccttgccggtga 1169
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>gb|AY836649.1| Uncultured bacterium clone BD8802 pectate lyase gene, complete cds
          Length = 1101

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 279 agctgcgccagcgcgcccttgccc 302
           ||||||||||||||||||||||||
Sbjct: 497 agctgcgccagcgcgcccttgccc 474
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 329    ggcgatccccagctgcgccagccgcc 354
              |||||| |||||||||||||||||||
Sbjct: 415584 ggcgatgcccagctgcgccagccgcc 415609
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
             sequence
          Length = 253151

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 206   gatgaagaagaagacgacgttgaaga 231
             ||||||||||||| ||||||||||||
Sbjct: 10622 gatgaagaagaagtcgacgttgaaga 10597
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>ref|NM_116941.1| Arabidopsis thaliana unknown protein AT4G08710 mRNA, complete cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 208  tgaagaagaagacgacgttga 228
            |||||||||||||||||||||
Sbjct: 1482 tgaagaagaagacgacgttga 1502
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 441      gcgatgacggccttgtcgaggccgg 465
                ||||||||| |||||||||||||||
Sbjct: 11779214 gcgatgacgtccttgtcgaggccgg 11779190
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>emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, complete sequence
          Length = 27428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 196   tgatggcggcgatgaagaagaagacgacgttga 228
             |||||| ||||||||||||||||| || |||||
Sbjct: 14222 tgatggtggcgatgaagaagaagaagatgttga 14254
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 184     cggtgccggggttgatggcggcgatgaag 212
               |||||||| |||||||||||||| |||||
Sbjct: 2855847 cggtgccgcggttgatggcggcggtgaag 2855819
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>emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 24
          Length = 199362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    tgaagaagaagacgacgttga 228
              |||||||||||||||||||||
Sbjct: 151365 tgaagaagaagacgacgttga 151385
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>emb|AL161813.1|ATT32A17 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A17 (ESSA project)
          Length = 104386

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   tgaagaagaagacgacgttga 228
             |||||||||||||||||||||
Sbjct: 27093 tgaagaagaagacgacgttga 27113
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 277     tgagctgcgccagcgcgccct 297
               |||||||||||||||||||||
Sbjct: 3776927 tgagctgcgccagcgcgccct 3776907
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>ref|NM_001027047.1| Caenorhabditis elegans F59B10.4a (F59B10.4) mRNA, complete cds
          Length = 824

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 196 tgatggcggcgatgaagaagaagacgacgttga 228
           |||||| ||||||||||||||||| || |||||
Sbjct: 746 tgatggtggcgatgaagaagaagaagatgttga 714
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>ref|NM_001027048.1| Caenorhabditis elegans F59B10.4b (F59B10.4) mRNA, complete cds
          Length = 1033

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 196 tgatggcggcgatgaagaagaagacgacgttga 228
           |||||| ||||||||||||||||| || |||||
Sbjct: 680 tgatggtggcgatgaagaagaagaagatgttga 648
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 200     ggcggcgatgaagaagaagacgacg 224
               |||||||| ||||||||||||||||
Sbjct: 1088787 ggcggcgaagaagaagaagacgacg 1088763



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     cgatgacggccttgtcgagg 461
               ||||||||||||||||||||
Sbjct: 8914765 cgatgacggccttgtcgagg 8914784
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 200      ggcggcgatgaagaagaagacgacg 224
                |||||||| ||||||||||||||||
Sbjct: 24532739 ggcggcgaggaagaagaagacgacg 24532715
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 441      gcgatgacggccttgtcgaggccgg 465
                ||||||||| |||||||||||||||
Sbjct: 11775977 gcgatgacgtccttgtcgaggccgg 11775953
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>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0035J18, from chromsome 3, complete sequence
          Length = 162711

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 441    gcgatgacggccttgtcgaggccgg 465
              ||||||||| |||||||||||||||
Sbjct: 131439 gcgatgacgtccttgtcgaggccgg 131463
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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    acaaacaggcaaagcacgtacgtac 107
             |||||| ||||||||||||||||||
Sbjct: 35805 acaaaccggcaaagcacgtacgtac 35781
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>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 83     acaaacaggcaaagcacgtacgtac 107
              |||||| ||||||||||||||||||
Sbjct: 102729 acaaaccggcaaagcacgtacgtac 102705
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>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0040H10
          Length = 173301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 200   ggcggcgatgaagaagaagacgacg 224
             |||||||| ||||||||||||||||
Sbjct: 15932 ggcggcgaggaagaagaagacgacg 15908
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 200    ggcggcgatgaagaagaagacgacg 224
              |||||||| ||||||||||||||||
Sbjct: 144212 ggcggcgaggaagaagaagacgacg 144188
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>dbj|AK121618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K12, full
           insert sequence
          Length = 1870

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 441 gcgatgacggccttgtcgaggccgg 465
           ||||||||| |||||||||||||||
Sbjct: 903 gcgatgacgtccttgtcgaggccgg 879
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 200     ggcggcgatgaagaagaagacgacg 224
               |||||||| ||||||||||||||||
Sbjct: 1088787 ggcggcgaagaagaagaagacgacg 1088763



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     cgatgacggccttgtcgagg 461
               ||||||||||||||||||||
Sbjct: 8914648 cgatgacggccttgtcgagg 8914667
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>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 97056

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 200   ggcggcgatgaagaagaagacgacg 224
             |||||||| ||||||||||||||||
Sbjct: 84059 ggcggcgaagaagaagaagacgacg 84035
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 200   ggcggcgatgaagaagaagacgacg 224
             |||||||| ||||||||||||||||
Sbjct: 27770 ggcggcgaagaagaagaagacgacg 27746
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>ref|NM_126075.4| Arabidopsis thaliana transcription factor AT5G66770 mRNA, complete
           cds
          Length = 2295

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gatgaagaagaagacgacgt 225
           ||||||||||||||||||||
Sbjct: 965 gatgaagaagaagacgacgt 946
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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
             sequence
          Length = 906719

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   cgagggctgagcggaagcct 431
             ||||||||||||||||||||
Sbjct: 81539 cgagggctgagcggaagcct 81558
to top
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    tggcggcgatgaagaagaagacga 222
              |||||||||||||||||| |||||
Sbjct: 607984 tggcggcgatgaagaagaggacga 607961
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     tcgatgttgagctgcgccag 289
               ||||||||||||||||||||
Sbjct: 5121238 tcgatgttgagctgcgccag 5121219
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>gb|AY772449.1| Rhodococcus equi strain 103+ heat shock protein (htrA) gene, complete
            cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  tgccggggttgatggcggcg 206
            ||||||||||||||||||||
Sbjct: 1151 tgccggggttgatggcggcg 1132
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>ref|XM_953430.1| Neurospora crassa OR74A hypothetical protein (NCU09824.1) partial
            mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  tggcggcgatgaagaagaagacga 222
            |||||||| |||||||||||||||
Sbjct: 1563 tggcggcggtgaagaagaagacga 1586
to top
>ref|XM_330473.1| Neurospora crassa OR74A hypothetical protein (NCU09824.1) partial
            mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  tggcggcgatgaagaagaagacga 222
            |||||||| |||||||||||||||
Sbjct: 1563 tggcggcggtgaagaagaagacga 1586
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 5243720 tgccggggttgatggcggcg 5243739



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 1734161 tgccggggttgatggcggcg 1734180
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>gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome 16, complete sequence
          Length = 129045

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cttcttcttacacctaagta 59
             ||||||||||||||||||||
Sbjct: 36353 cttcttcttacacctaagta 36372
to top
>ref|XM_656577.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4065.2), mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 cgatgaagaagaagacgacg 224
           ||||||||||||||||||||
Sbjct: 222 cgatgaagaagaagacgacg 241
to top
>ref|XM_567952.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNL03940) partial mRNA
          Length = 1444

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 cgagggctgagcggaagcct 431
           ||||||||||||||||||||
Sbjct: 127 cgagggctgagcggaagcct 108
to top
>ref|XM_569485.1| Cryptococcus neoformans var. neoformans JEC21 translation
           initiation factor (CNC02150) partial mRNA
          Length = 1613

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 tggcggcgatgaagaagaagacga 222
           |||||||||||||||||| |||||
Sbjct: 976 tggcggcgatgaagaagaggacga 999
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>gb|AF043697.2| Caenorhabditis elegans cosmid F56C11, complete sequence
          Length = 41615

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tgaagaagaagacgacgttg 227
             ||||||||||||||||||||
Sbjct: 12860 tgaagaagaagacgacgttg 12841
to top
>ref|XM_790314.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor
           3a, subunit 1 (LOC590717), partial mRNA
          Length = 1523

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 cgatgaagaagaagacgacg 224
           ||||||||||||||||||||
Sbjct: 948 cgatgaagaagaagacgacg 967
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 166    cgccgctgatgaacttgccggtgc 189
              |||||||| |||||||||||||||
Sbjct: 402332 cgccgctggtgaacttgccggtgc 402355
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 179    cttgccggtgccggggttgatggcggcg 206
              |||||||||| |||||||||||| ||||
Sbjct: 122050 cttgccggtggcggggttgatggaggcg 122077
to top
>emb|AJ318872.1|GGN318872 Gnetum gnemon partial mRNA for putative BEL1-like protein (melbel2
           gene)
          Length = 1295

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 cgatgaagaagaagacgacg 224
           ||||||||||||||||||||
Sbjct: 229 cgatgaagaagaagacgacg 248
to top
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 4044198 tgccggggttgatggcggcg 4044179
to top
>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete
             sequence
          Length = 98432

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   gaagaagaagacgacgttga 228
             ||||||||||||||||||||
Sbjct: 52631 gaagaagaagacgacgttga 52612
to top
>gb|AY062538.1| Arabidopsis thaliana SCARECROW gene regulator (At5g66770; MUD21.1)
           mRNA, complete cds
          Length = 2225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gatgaagaagaagacgacgt 225
           ||||||||||||||||||||
Sbjct: 961 gatgaagaagaagacgacgt 942
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 3453230 tgccggggttgatggcggcg 3453249
to top
>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete
           sequence
          Length = 180876

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  cttcttcttacacctaagta 59
           ||||||||||||||||||||
Sbjct: 358 cttcttcttacacctaagta 339
to top
>dbj|AK035292.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530010N18 product:WDR9 PROTEIN,
           FORM B homolog [Homo sapiens], full insert sequence
          Length = 2511

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  cttcttcttacacctaagta 59
           ||||||||||||||||||||
Sbjct: 679 cttcttcttacacctaagta 660
to top
>gb|AY150563.1| Aspergillus nidulans SipA3 gene, complete cds
          Length = 6209

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 cgatgaagaagaagacgacg 224
           ||||||||||||||||||||
Sbjct: 792 cgatgaagaagaagacgacg 773
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    gccccacgaacagctcgttc 371
              ||||||||||||||||||||
Sbjct: 316899 gccccacgaacagctcgttc 316880
to top
>emb|BX830446.1|CNS0A04D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB82ZC01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1970

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gatgaagaagaagacgacgt 225
           ||||||||||||||||||||
Sbjct: 940 gatgaagaagaagacgacgt 921
to top
>emb|BX832347.1|CNS09ZLX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1983

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gatgaagaagaagacgacgt 225
           ||||||||||||||||||||
Sbjct: 964 gatgaagaagaagacgacgt 945
to top
>gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, complete sequence
          Length = 41337

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ggcgatgaagaagaagacga 222
             ||||||||||||||||||||
Sbjct: 24698 ggcgatgaagaagaagacga 24717
to top
>gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, complete sequence
          Length = 90243

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 204   gcgatgaagaagaagacgacgttgaaga 231
             |||| |||||||||||||||| ||||||
Sbjct: 81483 gcgaagaagaagaagacgacgatgaaga 81456
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 2030031 tgccggggttgatggcggcg 2030050
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>gb|BT002580.1| Arabidopsis thaliana SCARECROW gene regulator (At5g66770) mRNA,
           complete cds
          Length = 2019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gatgaagaagaagacgacgt 225
           ||||||||||||||||||||
Sbjct: 809 gatgaagaagaagacgacgt 790
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>gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decarboxylase-like protein,
             cysteine dioxygenase-like protein, putative histidine
             protein kinase (hpkA), putative serine/threonine protein
             kinase (pknD1), putative histidine protein kinase (espA),
             putative membrane protein (espB), putative
             serine/threonine protein kinase (pknD2), putative serine
             protease DO-like precursor (htrA), and putative response
             regulator genes, complete cds; and unknown genes
          Length = 18424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tgccggggttgatggcggcg 206
             ||||||||||||||||||||
Sbjct: 16398 tgccggggttgatggcggcg 16417
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tgccggggttgatggcggcg 206
               ||||||||||||||||||||
Sbjct: 1258181 tgccggggttgatggcggcg 1258200
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     ccagccgccccacgaacagc 365
               ||||||||||||||||||||
Sbjct: 2345217 ccagccgccccacgaacagc 2345236
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>emb|AJ519722.2|YEN519722 Yersinia enterocolitica partial cryptic plasmid p29930
          Length = 40303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tgccggggttgatggcggcg 206
             ||||||||||||||||||||
Sbjct: 37562 tgccggggttgatggcggcg 37581
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  gatgaagaagaagacgacgt 225
            ||||||||||||||||||||
Sbjct: 4042 gatgaagaagaagacgacgt 4023
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>emb|AJ347753.1|BCE347753 Burkholderia cepacia bcrA gene for multidrug efflux protein
          Length = 1657

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagctgcgccagcgcgccct 297
            ||||||||||||||||||||
Sbjct: 1483 gagctgcgccagcgcgccct 1464
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>ref|XM_310477.2| Anopheles gambiae str. PEST ENSANGP00000019255
           (ENSANGG00000016766), partial mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 gcggctcgatctcgctgatg 257
           ||||||||||||||||||||
Sbjct: 301 gcggctcgatctcgctgatg 282
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ggcgatgaagaagaagacga 222
               ||||||||||||||||||||
Sbjct: 1544717 ggcgatgaagaagaagacga 1544736



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gcgcgtgccggtgccgatct 153
              ||||||||||||||||||||
Sbjct: 452195 gcgcgtgccggtgccgatct 452176
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>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151176

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    cgatgacggccttgtcgagg 461
              ||||||||||||||||||||
Sbjct: 103394 cgatgacggccttgtcgagg 103413
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    tgccggggttgatggcggcg 206
              ||||||||||||||||||||
Sbjct: 935443 tgccggggttgatggcggcg 935462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,905,119
Number of Sequences: 3902068
Number of extensions: 3905119
Number of successful extensions: 90163
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88263
Number of HSP's gapped (non-prelim): 1894
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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