>gb|AY111490.1| Zea mays CL44711_1 mRNA sequence
          Length = 637

 Score =  141 bits (71), Expect = 3e-30
 Identities = 112/126 (88%)
 Strand = Plus / Plus

                                                                       
Query: 406 tttgtgataccatgagtaacgatgaaaactcggtaccacaaactatggtgtgactgagtg 465
           ||||||||| |||||| |||||||| ||||  ||||||  || |||||||||||||||||
Sbjct: 411 tttgtgataacatgagcaacgatgagaactgtgtaccagcaattatggtgtgactgagtg 470

                                                                       
Query: 466 gatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggtt 525
           |||||||||||||||||||||||||||  ||||| |||| ||||||| || |||||||||
Sbjct: 471 gatgggctgcacaggaaagcaccctttgggataaaggaacaaacttgtttcctgcaggtt 530

                 
Query: 526 gatttt 531
           ||||||
Sbjct: 531 gatttt 536

>ref|XM_466484.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2085

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 465  ggatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggt 524
            ||||| |||||||||||||  || || | |||| | |||||||||||| || ||||||||
Sbjct: 1512 ggatgtgctgcacaggaaacaactctctgagatgaaggaataaacttgtttgctgcaggt 1453

             
Query: 525  t 525
            |
Sbjct: 1452 t 1452

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                            
Query: 465      ggatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggt 524
                ||||| |||||||||||||  || || | |||| | |||||||||||| || ||||||||
Sbjct: 22892212 ggatgtgctgcacaggaaacaactctctgagatgaaggaataaacttgtttgctgcaggt 22892271

                 
Query: 525      t 525
                |
Sbjct: 22892272 t 22892272

>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 465   ggatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggt 524
             ||||| |||||||||||||  || || | |||| | |||||||||||| || ||||||||
Sbjct: 12014 ggatgtgctgcacaggaaacaactctctgagatgaaggaataaacttgtttgctgcaggt 12073

              
Query: 525   t 525
             |
Sbjct: 12074 t 12074

>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0006O15
          Length = 139723

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 465    ggatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggt 524
              ||||| |||||||||||||  || || | |||| | |||||||||||| || ||||||||
Sbjct: 125550 ggatgtgctgcacaggaaacaactctctgagatgaaggaataaacttgtttgctgcaggt 125609

               
Query: 525    t 525
              |
Sbjct: 125610 t 125610

>dbj|AK102016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080F08, full
            insert sequence
          Length = 2085

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 465  ggatgggctgcacaggaaagcaccctttcagataagggaataaacttgntttctgcaggt 524
            ||||| |||||||||||||  || || | |||| | |||||||||||| || ||||||||
Sbjct: 1512 ggatgtgctgcacaggaaacaactctctgagatgaaggaataaacttgtttgctgcaggt 1453

             
Query: 525  t 525
            |
Sbjct: 1452 t 1452

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 72      acaaacagtaaattacaagcg 92
               |||||||||||||||||||||
Sbjct: 2445510 acaaacagtaaattacaagcg 2445490

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 72      acaaacagtaaattacaagcg 92
               |||||||||||||||||||||
Sbjct: 2445620 acaaacagtaaattacaagcg 2445600

>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
             complete sequence
          Length = 106057

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    acaaacagtaaattacaagcg 92
             |||||||||||||||||||||
Sbjct: 18006 acaaacagtaaattacaagcg 17986

>emb|AL591388.9| Zebrafish DNA sequence from clone BUSM1-255P14 in linkage group 7,
            complete sequence
          Length = 97239

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 49   agaggacagcactttctgaaa 69
            |||||||||||||||||||||
Sbjct: 8024 agaggacagcactttctgaaa 8044

>gb|DQ017631.1| Danio rerio TR2 mRNA, partial cds
          Length = 1740

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 gataccatgagtaacgatga 430
           ||||||||||||||||||||
Sbjct: 856 gataccatgagtaacgatga 875

>ref|NM_001020622.1| Danio rerio zgc:110672 (zgc:110672), mRNA
          Length = 2397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  gataccatgagtaacgatga 430
            ||||||||||||||||||||
Sbjct: 1097 gataccatgagtaacgatga 1116

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      ctgaaacaacaaacagtaaa 83
               ||||||||||||||||||||
Sbjct: 4935727 ctgaaacaacaaacagtaaa 4935708

>gb|BC095365.1| Danio rerio zgc:110672, mRNA (cDNA clone MGC:110672 IMAGE:7165974),
            complete cds
          Length = 2397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  gataccatgagtaacgatga 430
            ||||||||||||||||||||
Sbjct: 1097 gataccatgagtaacgatga 1116

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 265     tcgctattacgtgcaggacgtcca 288
               |||||||||||||||| |||||||
Sbjct: 1168650 tcgctattacgtgcagcacgtcca 1168673

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      ctgaaacaacaaacagtaaa 83
               ||||||||||||||||||||
Sbjct: 5002270 ctgaaacaacaaacagtaaa 5002251

>gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, complete sequence
          Length = 183178

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    gccttcaagtccaacacttgaaag 144
              ||||| ||||||||||||||||||
Sbjct: 105562 gcctttaagtccaacacttgaaag 105585

>emb|BX640593.8| Zebrafish DNA sequence from clone DKEY-183C16 in linkage group 4,
             complete sequence
          Length = 218192

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   gataccatgagtaacgatga 430
             ||||||||||||||||||||
Sbjct: 45864 gataccatgagtaacgatga 45883

>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence
          Length = 126085

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   ccaacacttgaaagaacaag 150
             ||||||||||||||||||||
Sbjct: 58471 ccaacacttgaaagaacaag 58452

>emb|CR936437.14| Zebrafish DNA sequence from clone CH211-197I23 in linkage group 3,
             complete sequence
          Length = 96056

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    agaggacagcactttctgaa 68
             ||||||||||||||||||||
Sbjct: 34043 agaggacagcactttctgaa 34062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,007,658
Number of Sequences: 3902068
Number of extensions: 4007658
Number of successful extensions: 72125
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72004
Number of HSP's gapped (non-prelim): 121
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)