ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62f13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagc 355 |||| |||| ||||| |||| |||||||| ||||||||| |||||||||||||||||||| Sbjct: 1089 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagcttcagc 1030 Query: 356 gtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaat 415 ||||||| |||||| ||||| |||||||| || |||| ||||| |||||||||||||| Sbjct: 1029 gtagtctggagccccaaaaactgcagaacctgcgacaatggcatttgcgccagcttcaat 970 Query: 416 gaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcactcc 475 ||||||||||||||||| || | || ||||| |||||||||||||||||||||||||| Sbjct: 969 aaccttgtaggcatttttcggaccaacaccaccatcaacctcaatccaggggttcactcc 910 Query: 476 cttctcttcgcataattttctcaaatcagcaattttctttacttgact 523 ||||||| | ||||| |||||| || |||||||||||||||||||| Sbjct: 909 cttctctgcacataaccttctcagttctgcaattttctttacttgact 862
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 182 bits (92), Expect = 8e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 293 ggatcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttc 352 ||||| |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| Sbjct: 924 ggatcctcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttc 865 Query: 353 agcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttc 412 || |||||| |||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 864 tgcatagtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttc 805 Query: 413 aatgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcac 472 ||||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| || Sbjct: 804 aatgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttac 745 Query: 473 tcccttctcttcgcataattttctcaaatcagcaattttctttacttg 520 |||||||||| | |||||| ||||||| || ||||| ||||| ||||| Sbjct: 744 tcccttctctgcacataatcttctcaactctgcaatcttcttcacttg 697
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 182 bits (92), Expect = 8e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 293 ggatcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttc 352 ||||| |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| Sbjct: 880 ggatcctcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttc 821 Query: 353 agcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttc 412 || |||||| |||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 820 tgcatagtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttc 761 Query: 413 aatgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcac 472 ||||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| || Sbjct: 760 aatgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttac 701 Query: 473 tcccttctcttcgcataattttctcaaatcagcaattttctttacttg 520 |||||||||| | |||||| ||||||| || ||||| ||||| ||||| Sbjct: 700 tcccttctctgcacataatcttctcaactctgcaatcttcttcacttg 653
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 182 bits (92), Expect = 8e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 293 ggatcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttc 352 ||||| |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| Sbjct: 913 ggatcctcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttc 854 Query: 353 agcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttc 412 || |||||| |||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 853 tgcatagtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttc 794 Query: 413 aatgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcac 472 ||||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| || Sbjct: 793 aatgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttac 734 Query: 473 tcccttctcttcgcataattttctcaaatcagcaattttctttacttg 520 |||||||||| | |||||| ||||||| || ||||| ||||| ||||| Sbjct: 733 tcccttctctgcacataatcttctcaactctgcaatcttcttcacttg 686
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 182 bits (92), Expect = 8e-43 Identities = 194/228 (85%) Strand = Plus / Minus Query: 293 ggatcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttc 352 ||||| |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| Sbjct: 896 ggatcctcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttc 837 Query: 353 agcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttc 412 || |||||| |||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 836 tgcatagtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttc 777 Query: 413 aatgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcac 472 ||||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| || Sbjct: 776 aatgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttac 717 Query: 473 tcccttctcttcgcataattttctcaaatcagcaattttctttacttg 520 |||||||||| | |||||| ||||||| || ||||| ||||| ||||| Sbjct: 716 tcccttctctgcacataatcttctcaactctgcaatcttcttcacttg 669
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 178 bits (90), Expect = 1e-41 Identities = 165/190 (86%) Strand = Plus / Minus Query: 293 ggatcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttc 352 ||||| |||||||| ||| || |||||||||||||||||||| ||||| ||||||||||| Sbjct: 924 ggatcctcatgctggtacagccacaggtcttttgctggtcttgattcccttgatagcttc 865 Query: 353 agcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttc 412 || |||||| |||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 864 tgcatagtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttc 805 Query: 413 aatgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcac 472 ||||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| || Sbjct: 804 aatgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttac 745 Query: 473 tcccttctct 482 |||||||||| Sbjct: 744 tcccttctct 735
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 111 bits (56), Expect = 2e-21 Identities = 170/208 (81%) Strand = Plus / Minus Query: 316 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 375 ||||||||||||| | || || ||||| ||||||||||| || |||||||| || || | Sbjct: 852 caggtcttttgctagctttgatcccttttatagcttcagcataatctttagctccaaata 793 Query: 376 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttag 435 | |||||||||||||| || ||||| || ||||| ||||| |||||||| |||||| | Sbjct: 792 cagcagaaccagcaactagtgcattagctccagcctcaatcaccttgtaagcatttgctg 733 Query: 436 ggctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttc 495 || | || ||||| || || |||||||| || || || |||||||| |||| ||| ||| Sbjct: 732 gggtaaccccaccatcgacttcaatccatggattgacacccttctccacgcacaatcttc 673 Query: 496 tcaaatcagcaattttctttacttgact 523 |||| ||||||||||||||||| ||||| Sbjct: 672 tcaactcagcaattttctttacgtgact 645
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 321 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 380 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 789 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 730 Query: 381 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttagggctg 440 |||||||| || | |||||| || ||||| |||||||||||||| |||||| || | Sbjct: 729 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 670 Query: 441 actccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 500 |||||||| || ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 669 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 610 Query: 501 tcagcaattttctttacttg 520 || | |||||||| ||||| Sbjct: 609 tctgagattttcttgacttg 590
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 321 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 380 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 933 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 874 Query: 381 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttagggctg 440 |||||||| || | |||||| || ||||| |||||||||||||| |||||| || | Sbjct: 873 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 814 Query: 441 actccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 500 |||||||| || ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 813 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 754 Query: 501 tcagcaattttctttacttg 520 || | |||||||| ||||| Sbjct: 753 tctgagattttcttgacttg 734
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 321 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 380 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 898 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 839 Query: 381 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttagggctg 440 |||||||| || | |||||| || ||||| |||||||||||||| |||||| || | Sbjct: 838 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 779 Query: 441 actccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 500 |||||||| || ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 778 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 719 Query: 501 tcagcaattttctttacttg 520 || | |||||||| ||||| Sbjct: 718 tctgagattttcttgacttg 699
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 321 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 380 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 890 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 831 Query: 381 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttagggctg 440 |||||||| || | |||||| || ||||| |||||||||||||| |||||| || | Sbjct: 830 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 771 Query: 441 actccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 500 |||||||| || ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 770 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 711 Query: 501 tcagcaattttctttacttg 520 || | |||||||| ||||| Sbjct: 710 tctgagattttcttgacttg 691
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1068 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1009 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| |||||||||||||| ||||| || Sbjct: 1008 gctgatccagccactagagcatttgctccagcctcaatgaccttgtacgcattcgctgga 949 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 948 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 889 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 888 aagtccgagattttctttacttg 866
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 932 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 873 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || |||||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 872 gctgaaccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 813 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 812 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 753 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 752 aagtccgagattttctttacttg 730
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 965 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 906 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 905 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 846 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 845 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 786 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 785 aagtccgagattttctttacttg 763
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 1036 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 977 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 976 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 917 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 916 aagtccgagattttctttacttg 894
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 827 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 768 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 767 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 708 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 707 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 648 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 647 aagtccgagattttctttacttg 625
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 959 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 900 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 899 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 840 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 839 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 780 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 779 aagtccgagattttctttacttg 757
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 996 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 937 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 936 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 877 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 876 aagtccgagattttctttacttg 854
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1067 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1008 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 1007 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 948 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 947 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 888 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 887 aagtccgagattttctttacttg 865
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 1036 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 977 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 |||| ||||| ||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 976 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 917 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 916 aagtccgagattttctttacttg 894
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 87.7 bits (44), Expect = 3e-14 Identities = 149/184 (80%) Strand = Plus / Minus Query: 316 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 375 |||| |||||||| ||||| || ||||| ||||||||||| || || ||| || || | Sbjct: 974 caggccttttgcttgtcttgatccctttaatagcttcagcataatcaggagctccaaaga 915 Query: 376 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttag 435 | |||||||| || || | ||||| || || ||||||||||||||||| |||||||| | Sbjct: 914 cagcagaacctgctaccaaggcattggctccggcttcaatgaccttgtaagcatttttgg 855 Query: 436 ggctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttc 495 | | |||||||| ||||| |||||||| ||||| ||||||||||| | |||| ||||| Sbjct: 854 gaccaactccaccatcaacttcaatccaagggtttactcccttctcagcacatatttttc 795 Query: 496 tcaa 499 |||| Sbjct: 794 tcaa 791
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 87.7 bits (44), Expect = 3e-14 Identities = 149/184 (80%) Strand = Plus / Minus Query: 316 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 375 |||| |||||||| ||||| || ||||| ||||||||||| || || ||| || || | Sbjct: 828 caggccttttgctcgtcttgatccctttaatagcttcagcataatcaggagctccaaaga 769 Query: 376 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttag 435 | ||||||||||| || | ||||| || |||||||||||||||||||| |||||||| | Sbjct: 768 cagcagaaccagctaccaaggcattggctccagcttcaatgaccttgtaagcatttttgg 709 Query: 436 ggctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttc 495 | | |||||||| ||||| |||||||| ||||| | |||| |||| |||| | ||||| Sbjct: 708 gaccaactccaccatcaacttcaatccaagggtttaatcccctctcagcgcagatttttc 649 Query: 496 tcaa 499 |||| Sbjct: 648 tcaa 645
>emb|BX832443.1|CNS0A0ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| |||||||| |||||||||||| ||||| || |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcgtcggcgtagtccttagcgccaaataca 997 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatt 430 || || ||||| || |||||||| |||||||| |||||||| ||||| ||||| Sbjct: 996 gcggatccagccacgagagcatttgcgccagcgtcaatgacgttgtacgcatt 944
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1111 ggtcgtttgcgggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1052 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatt 430 || || ||||| || |||||||| |||||||| ||||||||| |||| ||||| Sbjct: 1051 gctgatccagcgacgagagcatttgcgccagcgtcaatgaccgtgtacgcatt 999
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 77.8 bits (39), Expect = 3e-11 Identities = 162/203 (79%) Strand = Plus / Minus Query: 318 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 377 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgcaggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 378 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttaggg 437 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 996 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 937 Query: 438 ctgactccaccgtcaacctcaatccaggggttcactcccttctcttcgcataattttctc 497 | || ||||| ||||| ||||| || ||||| |||||||||||| | || | ||| ||| Sbjct: 936 gtcacaccaccatcaacttcaattcatgggtttactcccttctctgcacacattttcctc 877 Query: 498 aaatcagcaattttctttacttg 520 || || | |||||||||||||| Sbjct: 876 aagtccgagattttctttacttg 854
>emb|X96878.1|CRPPEGENE C.reinhardtii mRNA for pentose-5-phosphate 3-epimerase Length = 820 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 444 ccaccgtcaacctcaatccaggggttcactcccttctc 481 ||||||||||||||||||||||||||||| |||||||| Sbjct: 286 ccaccgtcaacctcaatccaggggttcacgcccttctc 249
>dbj|AP004930.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093a, complete sequence Length = 42990 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 475 ccttctcttcgcataattttctcaaatcagcaattttctttacttgact 523 |||||||| |||||||| ||||||| |||| |||||||||||||||||| Sbjct: 3528 ccttctctgcgcataatcttctcaagtcagaaattttctttacttgact 3480
>gb|AY513905.1| Zea mays subsp. parviglumis voucher PI331786 RFLP marker csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377719.1| Zea mays subsp. mays clone B73 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377714.1| Zea mays subsp. mays clone Mo24W anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377712.1| Zea mays subsp. mays clone Ky21 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377711.1| Zea mays subsp. mays clone W153R anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377710.1| Zea mays subsp. mays clone SIN2 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377709.1| Zea mays subsp. mays clone SAN329 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377708.1| Zea mays subsp. mays clone APC13 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377706.1| Zea mays subsp. mays clone PI213793 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377699.1| Zea mays subsp. mays clone GUA131 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377698.1| Zea mays subsp. mays clone OAX68 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377695.1| Zea mays subsp. mays clone CHI349 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 296 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 415 tgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcactc 474 ||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| |||| Sbjct: 3698293 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 3698234 Query: 475 cct 477 ||| Sbjct: 3698233 cct 3698231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 365 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 420 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 3698462 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 3698407 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gtgatacaacgtatggcttg 204 |||||||||||||||||||| Sbjct: 35475891 gtgatacaacgtatggcttg 35475910
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 415 tgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcactc 474 ||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| |||| Sbjct: 83084 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 83143 Query: 475 cct 477 ||| Sbjct: 83144 cct 83146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 365 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 420 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 82915 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 82970
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 415 tgaccttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcactc 474 ||||||||||||| ||||| || | |||||||| |||||||||||||| ||||| |||| Sbjct: 3698404 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 3698345 Query: 475 cct 477 ||| Sbjct: 3698344 cct 3698342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 365 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 420 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 3698573 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 3698518 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gtgatacaacgtatggcttg 204 |||||||||||||||||||| Sbjct: 35565963 gtgatacaacgtatggcttg 35565982
>gb|AY513910.1| Zea luxurians voucher G-5 RFLP marker csu1171 Length = 414 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513909.1| Zea mays subsp. mexicana voucher PI566673 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513908.1| Zea mays subsp. mexicana voucher 11066 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513907.1| Zea luxurians voucher PI311282 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513904.1| Zea mays subsp. parviglumis voucher PI331783 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513903.1| Zea mays subsp. parviglumis voucher 967 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513902.1| Zea mays subsp. parviglumis voucher Site4 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513901.1| Zea mays subsp. parviglumis voucher Site3 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513900.1| Zea mays subsp. parviglumis voucher PI566691 RFLP marker csu1171 Length = 467 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513898.1| Zea mays subsp. parviglumis voucher PI384062 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513897.1| Zea mays subsp. parviglumis voucher PI331789 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513896.1| Zea mays subsp. mexicana voucher s.n.2 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513895.1| Zea mays subsp. mexicana voucher 5630 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513894.1| Zea mays subsp. mexicana voucher 28620 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513893.1| Zea mays subsp. mexicana voucher PI566685 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513892.1| Zea mays subsp. mexicana voucher PI566682 RFLP marker csu1171 Length = 432 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513891.1| Zea mays subsp. mexicana voucher PI566681 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513890.1| Zea mays subsp. mexicana voucher PI566680 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513888.1| Zea luxurians voucher 30900 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513887.1| Zea luxurians voucher G-38 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513886.1| Zea luxurians voucher G-36 RFLP marker csu1171 Length = 466 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513885.1| Zea luxurians voucher G-42 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513884.1| Zea luxurians voucher 2440 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377720.1| Tripsacum dactyloides clone T. anonymous genomic RFLP marker Csu1171 Length = 467 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 164 atgcagctacagctagaggtctttggctggtcttgattcctttgatagct 115
>gb|AF377718.1| Zea mays subsp. mays clone Tx601 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377717.1| Zea mays subsp. mays clone T8 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377716.1| Zea mays subsp. mays clone OH43 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377715.1| Zea mays subsp. mays clone NC258 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377713.1| Zea mays subsp. mays clone Mo17 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377707.1| Zea mays subsp. mays clone CHH160 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377705.1| Zea mays subsp. mays clone VEN453 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377704.1| Zea mays subsp. mays clone OAX70 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377703.1| Zea mays subsp. mays clone MAG450 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377702.1| Zea mays subsp. mays clone YUC7 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377700.1| Zea mays subsp. mays clone PUE32 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377697.1| Zea mays subsp. mays clone URGII anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377696.1| Zea mays subsp. mays clone MEX48 anonymous genomic RFLP marker Csu1171 Length = 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 417 accttgtaggcatttttagggctgactccaccgtcaacctcaatccaggggttcactccc 476 |||||||| |||||||| || ||||||||||||| || |||||||| ||||||| |||| Sbjct: 90240 accttgtaagcatttttcggagtgactccaccgtcgacttcaatccatgggttcagtccc 90181 Query: 477 t 477 | Sbjct: 90180 t 90180 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 349 cttcagcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccag 408 ||||||||||||||||||| || || || || || ||||| || | |||||| || |||| Sbjct: 90389 cttcagcgtagtctttagctccaaatacagctgatccagccactaaagcatttgctccag 90330 Query: 409 cttcaatgacctt 421 | ||||| ||||| Sbjct: 90329 cctcaataacctt 90317
>gb|AY513906.1| Zea luxurians voucher 30919 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AY513899.1| Zea mays subsp. parviglumis voucher PI384070 RFLP marker csu1171 Length = 469 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| ||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctaggggtctttggctggtctttattcctttgatagct 118
>gb|AY513889.1| Zea mays subsp. mexicana voucher PI566677 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AF377701.1| Zea mays subsp. mays clone GUA14 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 301 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 350 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence Length = 194641 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 taaaacaaaaaaggggagatgt 266 |||||||||||||||||||||| Sbjct: 178606 taaaacaaaaaaggggagatgt 178627
>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence Length = 208036 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 taaaacaaaaaaggggagatgt 266 |||||||||||||||||||||| Sbjct: 5800 taaaacaaaaaaggggagatgt 5821
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 aaccacaacaatggtaaaacaa 252 |||||||||||||||||||||| Sbjct: 1911836 aaccacaacaatggtaaaacaa 1911857
>gb|AC074270.25|AC074270 Homo sapiens 12 BAC RP11-84G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 140597 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 caaaaaaggggagatgttacac 271 |||||||||||||||||||||| Sbjct: 112789 caaaaaaggggagatgttacac 112810
>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence Length = 166122 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 aaccacaacaatggtaaaacaa 252 |||||||||||||||||||||| Sbjct: 137846 aaccacaacaatggtaaaacaa 137867
>emb|AL672245.6| Mouse DNA sequence from clone RP23-43K8 on chromosome X, complete sequence Length = 235666 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 gtaaaacaaaaaaggggagatg 265 |||||||||||||||||||||| Sbjct: 224724 gtaaaacaaaaaaggggagatg 224703
>gb|AC154609.2| Mus musculus BAC clone RP23-334N13 from 16, complete sequence Length = 202556 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 taaaacaaaaaaggggagatgt 266 |||||||||||||||||||||| Sbjct: 36677 taaaacaaaaaaggggagatgt 36656
>gb|AC139241.4| Mus musculus BAC clone RP24-79L4 from 3, complete sequence Length = 200361 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 taaaacaaaaaaggggagatgt 266 |||||||||||||||||||||| Sbjct: 87863 taaaacaaaaaaggggagatgt 87842
>gb|AF044909.1|AF044909 Macropus eugenii X Wallabia bicolor endogenous retroviral element KERV-1 sequence Length = 1873 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 aaaacaaaaaaggggagatgtt 267 |||||||||||||||||||||| Sbjct: 1328 aaaacaaaaaaggggagatgtt 1349
>emb|AL590619.9| Mouse DNA sequence from clone RP23-357B4 on chromosome 8, complete sequence Length = 198540 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 taaaacaaaaaaggggagatgt 266 |||||||||||||||||||||| Sbjct: 165534 taaaacaaaaaaggggagatgt 165555
>gb|AE017132.1| Yersinia pestis biovar Medievalis str. 91001 section 6 of 16 of the complete genome Length = 290155 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 tatgtagtgcaaatagtacaa 93 ||||||||||||||||||||| Sbjct: 193910 tatgtagtgcaaatagtacaa 193930
>gb|AC110381.5| Mus musculus BAC clone RP24-198I16 from chromosome 10, complete sequence Length = 166554 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 atgatggtgatctctgtgata 190 ||||||||||||||||||||| Sbjct: 6279 atgatggtgatctctgtgata 6299
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 tatgtagtgcaaatagtacaa 93 ||||||||||||||||||||| Sbjct: 2824793 tatgtagtgcaaatagtacaa 2824773
>gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199258 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 atgatggtgatctctgtgata 190 ||||||||||||||||||||| Sbjct: 17097 atgatggtgatctctgtgata 17077
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 tatgtagtgcaaatagtacaa 93 ||||||||||||||||||||| Sbjct: 1973815 tatgtagtgcaaatagtacaa 1973835
>emb|AJ414150.1| Yersinia pestis strain CO92 complete genome; segment 10/20 Length = 335050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 tatgtagtgcaaatagtacaa 93 ||||||||||||||||||||| Sbjct: 58964 tatgtagtgcaaatagtacaa 58984
>gb|AC021148.8| Homo sapiens BAC clone RP11-472B18 from 4, complete sequence Length = 124102 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 246 aaaacaaaaaaggggagatgttaca 270 |||||||||| |||||||||||||| Sbjct: 105516 aaaacaaaaatggggagatgttaca 105492
>gb|AC093532.2| Homo sapiens chromosome 5 clone RP11-407N4, complete sequence Length = 182564 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 ttttgctggtcttaattcctttgat 346 |||||||||||||| |||||||||| Sbjct: 99511 ttttgctggtcttacttcctttgat 99535
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctgatgatggtgatctctg 185 ||||||||||||||||||||| Sbjct: 20939 atctgatgatggtgatctctg 20959
>gb|AC116553.2| Homo sapiens chromosome 16 clone RP11-43P5, complete sequence Length = 173692 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 aaaacaaaaaaggggagatgt 266 ||||||||||||||||||||| Sbjct: 131609 aaaacaaaaaaggggagatgt 131589 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 aaaacaaaaaaggggagatgt 266 ||||||||||||||||||||| Sbjct: 128562 aaaacaaaaaaggggagatgt 128582
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 caacgcaaaccacaacaatgg 244 ||||||||||||||||||||| Sbjct: 1400253 caacgcaaaccacaacaatgg 1400233
>gb|AC026108.29| Homo sapiens 12 BAC RP11-438H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77790 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 322 ttttgctggtcttaattcctttgatagcttcag 354 ||||| || |||||||||||||||||| ||||| Sbjct: 16082 ttttgatgctcttaattcctttgatagattcag 16050 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 tcttaattcctttgatagcttcag 354 |||||||||||||||||| ||||| Sbjct: 15941 tcttaattcctttgatagattcag 15918
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 318 ggtcttttgctggtcttaattcctttgatagct 350 |||| |||||||| |||||||||||| |||||| Sbjct: 54662 ggtcgtttgctggccttaattccttttatagct 54694
>gb|AC006975.2|AC006975 Homo sapiens PAC clone RP5-1026B21 from X, complete sequence Length = 146410 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 467 gttcactcccttctcttcgcataattttc 495 |||||||| ||||||| |||||||||||| Sbjct: 80199 gttcactctcttctctacgcataattttc 80227
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 tcagcaattttctttacttga 521 ||||||||||||||||||||| Sbjct: 144844 tcagcaattttctttacttga 144824
>gb|AC106785.3| Homo sapiens chromosome 16 clone RP11-352B15, complete sequence Length = 177461 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 aaaacaaaaaaggggagatgt 266 ||||||||||||||||||||| Sbjct: 132167 aaaacaaaaaaggggagatgt 132147 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 aaaacaaaaaaggggagatgt 266 ||||||||||||||||||||| Sbjct: 129120 aaaacaaaaaaggggagatgt 129140
>ref|NM_125444.2| Arabidopsis thaliana transferase AT5G60510 mRNA, complete cds Length = 1550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gcaacgcaaaccacaacaat 242 |||||||||||||||||||| Sbjct: 556 gcaacgcaaaccacaacaat 537
>gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome 6, complete sequence Length = 243690 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aaacaaaaaaggggagatgt 266 |||||||||||||||||||| Sbjct: 197271 aaacaaaaaaggggagatgt 197290
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cagaaccagcaacaagagca 398 |||||||||||||||||||| Sbjct: 5857 cagaaccagcaacaagagca 5876
>emb|BX957252.12| Zebrafish DNA sequence from clone CH211-106J21, complete sequence Length = 177496 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gggagatgttacacagtgta 277 |||||||||||||||||||| Sbjct: 133961 gggagatgttacacagtgta 133980
>emb|CR788248.24| Zebrafish DNA sequence from clone CH211-112B1 in linkage group 1, complete sequence Length = 87741 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ctcaaatcagcaattttctt 514 |||||||||||||||||||| Sbjct: 25467 ctcaaatcagcaattttctt 25448
>ref|XM_720329.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05025) partial mRNA Length = 120 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 aaaaggaaaatatatttctt 146 |||||||||||||||||||| Sbjct: 83 aaaaggaaaatatatttctt 102
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 cgcagaaccagcaacaagag 396 |||||||||||||||||||| Sbjct: 2961180 cgcagaaccagcaacaagag 2961199
>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23, complete sequence Length = 220945 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ctcaaatcagcaattttctt 514 |||||||||||||||||||| Sbjct: 172979 ctcaaatcagcaattttctt 172998
>gb|AC145208.1| Homo sapiens chromosome 17, clone XXfos-85405H6, complete sequence Length = 37556 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tggtaaaacaaaaaagggga 261 |||||||||||||||||||| Sbjct: 12189 tggtaaaacaaaaaagggga 12170
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 9106 caaaccacaacaatggtaaa 9087
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 101865 caaaccacaacaatggtaaa 101846
>gb|AC092829.4| Homo sapiens 12 BAC RP11-165P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116783 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggaaaaggaaaatatatttc 144 |||||||||||||||||||| Sbjct: 24951 ggaaaaggaaaatatatttc 24932
>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164078 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 caaatcagcaattttctttacttg 520 ||||||||||||||| |||||||| Sbjct: 112291 caaatcagcaattttgtttacttg 112268
>gb|AC015766.9| Homo sapiens chromosome 18, clone RP11-1P16, complete sequence Length = 153781 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 aaaggaaaatatatttcttcgctg 151 |||||||||||| ||||||||||| Sbjct: 15923 aaaggaaaatatttttcttcgctg 15946
>gb|AC087506.7| Homo sapiens chromosome 18, clone RP11-726O24, complete sequence Length = 169753 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 aaaggaaaatatatttcttcgctg 151 |||||||||||| ||||||||||| Sbjct: 142482 aaaggaaaatatttttcttcgctg 142505
>ref|XM_677933.1| PREDICTED: Danio rerio hypothetical protein LOC555433 (LOC555433), mRNA Length = 2460 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 atctgatgatggtgatctctgtga 188 ||||| |||||||||||||||||| Sbjct: 328 atctgctgatggtgatctctgtga 305
>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone BACR34C17, complete sequence Length = 167447 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 actggaaaaggaaaatatat 141 |||||||||||||||||||| Sbjct: 155905 actggaaaaggaaaatatat 155886
>gb|AC022174.6| Homo sapiens chromosome 18, clone RP11-489I20, complete sequence Length = 162881 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 aaaggaaaatatatttcttcgctg 151 |||||||||||| ||||||||||| Sbjct: 140610 aaaggaaaatatttttcttcgctg 140633
>gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone BACR13F14, complete sequence Length = 198244 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 actggaaaaggaaaatatat 141 |||||||||||||||||||| Sbjct: 145562 actggaaaaggaaaatatat 145581
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 20039202 caaaccacaacaatggtaaa 20039183
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 26350156 caaaccacaacaatggtaaa 26350137
>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone BACR46G10, complete sequence Length = 165158 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 actggaaaaggaaaatatat 141 |||||||||||||||||||| Sbjct: 117334 actggaaaaggaaaatatat 117315
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tggaaaaggaaaatatattt 143 |||||||||||||||||||| Sbjct: 4577064 tggaaaaggaaaatatattt 4577045
>emb|BX821313.1|CNS0AA43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 433 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ataattttctcaaatcagca 506 |||||||||||||||||||| Sbjct: 410 ataattttctcaaatcagca 391
>gb|AC092453.10| Homo sapiens 12 BAC RP11-130L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160984 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggaaaaggaaaatatatttc 144 |||||||||||||||||||| Sbjct: 22894 ggaaaaggaaaatatatttc 22875
>gb|AC139530.3| Homo sapiens chromosome 17, clone RP13-1032I1, complete sequence Length = 159125 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tggtaaaacaaaaaagggga 261 |||||||||||||||||||| Sbjct: 5128 tggtaaaacaaaaaagggga 5109
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gtgatacaacgtatggcttg 204 |||||||||||||||||||| Sbjct: 11735 gtgatacaacgtatggcttg 11716
>gb|AY087655.1| Arabidopsis thaliana clone 37419 mRNA, complete sequence Length = 1100 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gcaacgcaaaccacaacaat 242 |||||||||||||||||||| Sbjct: 556 gcaacgcaaaccacaacaat 537
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gtgatacaacgtatggcttg 204 |||||||||||||||||||| Sbjct: 8854 gtgatacaacgtatggcttg 8873
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tggaaaaggaaaatatattt 143 |||||||||||||||||||| Sbjct: 42404 tggaaaaggaaaatatattt 42385
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 atctgatgatggtgatctctgtga 188 ||||| |||||||||||||||||| Sbjct: 37242 atctgctgatggtgatctctgtga 37265
>emb|BX005405.11| Zebrafish DNA sequence from clone DKEY-19I22 in linkage group 20, complete sequence Length = 62329 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 acaatggtaaaacaaaaaag 257 |||||||||||||||||||| Sbjct: 4809 acaatggtaaaacaaaaaag 4828
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gcaacgcaaaccacaacaat 242 |||||||||||||||||||| Sbjct: 51717 gcaacgcaaaccacaacaat 51698
>emb|BX470148.15| Zebrafish DNA sequence from clone CH211-198A16 in linkage group 20, complete sequence Length = 64300 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 acaatggtaaaacaaaaaag 257 |||||||||||||||||||| Sbjct: 59492 acaatggtaaaacaaaaaag 59473
>gb|AC124979.8| Mus musculus chromosome 3, clone RP24-117N14, complete sequence Length = 187567 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aaaacaaaaaaggggagatg 265 |||||||||||||||||||| Sbjct: 130432 aaaacaaaaaaggggagatg 130413
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 actggaaaaggaaaatatat 141 |||||||||||||||||||| Sbjct: 306441 actggaaaaggaaaatatat 306422
>gb|AC137757.4| Mus musculus BAC clone RP23-287N15 from chromosome 6, complete sequence Length = 182088 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aaacaaaaaaggggagatgt 266 |||||||||||||||||||| Sbjct: 30001 aaacaaaaaaggggagatgt 30020
>gb|U65072.1|MMU65072 Mus musculus OG-12a homeodomain protein and alternatively spliced OG-12b homeodomain protein gene, partial cds Length = 2931 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aaaacaaaaaaggggagatg 265 |||||||||||||||||||| Sbjct: 862 aaaacaaaaaaggggagatg 843
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 26278325 caaaccacaacaatggtaaa 26278306
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 114140 caaaccacaacaatggtaaa 114121
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 caaaccacaacaatggtaaa 248 |||||||||||||||||||| Sbjct: 64429 caaaccacaacaatggtaaa 64410
>emb|AL845264.18| Mouse DNA sequence from clone RP23-116F18 on chromosome 2, complete sequence Length = 207724 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcaaatagtacaagatatat 100 |||||||||||||||||||| Sbjct: 46145 gcaaatagtacaagatatat 46126
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cagaaccagcaacaagagca 398 |||||||||||||||||||| Sbjct: 35845 cagaaccagcaacaagagca 35826
>emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chromosome 4, complete sequence Length = 189115 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 aaacaaaaaaggggagatgt 266 |||||||||||||||||||| Sbjct: 5963 aaacaaaaaaggggagatgt 5982
>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete sequence Length = 224038 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 aaaaggaaaatatatttctt 146 |||||||||||||||||||| Sbjct: 36068 aaaaggaaaatatatttctt 36087
>emb|AL591884.11| Mouse DNA sequence from clone RP23-183N8 on chromosome 2, complete sequence Length = 204495 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aaacaaaaaaggggagatgt 266 |||||||||||||||||||| Sbjct: 124009 aaacaaaaaaggggagatgt 123990
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12 Length = 153936 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tggaaaaggaaaatatattt 143 |||||||||||||||||||| Sbjct: 52381 tggaaaaggaaaatatattt 52362 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,808,722 Number of Sequences: 3902068 Number of extensions: 5808722 Number of successful extensions: 122528 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121933 Number of HSP's gapped (non-prelim): 579 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
