ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62f20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478639.1| Oryza sativa (japonica cultivar-group), mRNA 347 2e-92
2dbj|AK065606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 345 9e-92
4dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D... 345 9e-92
5ref|XM_386009.1| Gibberella zeae PH-1 chromosome 3 predicted pro... 46 0.11
6gb|AF320250.2|AF320250 Lactobacillus delbrueckii YmdA (ymdA) gen... 46 0.11
7gb|AY691215.1| Butyrivibrio crossotus 60 kDa chaperonin (cpn60) ... 44 0.45
8gb|AF437103.1| Uncultured pig faeces bacterium clone 010_C09 60 ... 44 0.45
9ref|XM_755381.1| Ustilago maydis 521 hypothetical protein (UM043... 44 0.45
10emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome;... 44 0.45
11emb|AJ635428.1| Cucumis sativus mRNA for putative translation re... 44 0.45
12dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.45
13gb|BC039700.1| Mus musculus myosin ID, mRNA (cDNA clone IMAGE:36... 42 1.8
14gb|AY691242.1| Clostridium xylanolyticum 60 kDa chaperonin (cpn6... 42 1.8
15gb|AF437240.1| Uncultured pig faeces bacterium clone 018_F11 60 ... 42 1.8
16gb|AF437214.1| Uncultured pig faeces bacterium clone 017_D11 60 ... 42 1.8
17gb|AF437170.1| Uncultured pig faeces bacterium clone 014_D08 60 ... 42 1.8
18gb|AF437163.1| Uncultured pig faeces bacterium clone 014_B04 60 ... 42 1.8
19gb|AF437125.1| Uncultured pig faeces bacterium clone 011_B05 60 ... 42 1.8
20gb|AF437094.1| Uncultured pig faeces bacterium clone 009_G05 60 ... 42 1.8
21gb|AF437064.1| Uncultured pig faeces bacterium clone 007_H12 60 ... 42 1.8
22gb|AF437041.1| Uncultured pig faeces bacterium clone 006_G04 60 ... 42 1.8
23gb|AF437031.1| Uncultured pig faeces bacterium clone 006_E01 60 ... 42 1.8
24gb|AF437006.1| Uncultured pig faeces bacterium clone 005_E06 60 ... 42 1.8
25gb|AF436999.1| Uncultured pig faeces bacterium clone 005_D02 60 ... 42 1.8
26gb|AF436964.1| Uncultured pig faeces bacterium clone 003_D06 60 ... 42 1.8
27gb|AF436915.1| Uncultured pig faeces bacterium clone 001_H02 60 ... 42 1.8
28gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome... 42 1.8
29emb|CR688129.2|CNS0FTWT Tetraodon nigroviridis full-length cDNA 42 1.8
30emb|CR683748.1|CNS0FQJ4 Tetraodon nigroviridis full-length cDNA 42 1.8
31emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chr... 42 1.8
32dbj|AK148112.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 42 1.8
33gb|BC034071.1| Mus musculus myosin ID, mRNA (cDNA clone IMAGE:42... 42 1.8
34gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 7.0
35gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosom... 40 7.0
36gb|AY691311.1| Clostridium cellulolyticum 60 kDa chaperonin (cpn... 40 7.0
37gb|AY691269.1| Oxobacter pfennigii 60 kDa chaperonin (cpn60) gen... 40 7.0
38gb|AY691227.1| Clostridium cellobioparum 60 kDa chaperonin (cpn6... 40 7.0
39gb|AY691223.1| Clostridium aerotolerans 60 kDa chaperonin (cpn60... 40 7.0
40gb|AF437261.1| Uncultured pig faeces bacterium clone P40-0009 60... 40 7.0
41gb|AF436943.1| Uncultured pig faeces bacterium clone 002_G03 60 ... 40 7.0
42gb|DQ106218.1| Uncultured bacterium clone ce1_cl71_cn1 60 kDa ch... 40 7.0
43gb|DQ106203.1| Uncultured bacterium clone ce1_cl56_cn1 60 kDa ch... 40 7.0
44gb|DQ106033.1| Uncultured bacterium clone ce0_cl0_sn44 60 kDa ch... 40 7.0
45gb|AY277971.1| Takifugu rubripes transcription factor Sox6a (Sox... 40 7.0
46gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, comple... 40 7.0
47gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, com... 40 7.0
48gb|DQ099905.1| Brachyspira hyodysenteriae strain ATCC 27164 60 k... 40 7.0
49emb|AL031589.10|HS11O7 Human DNA sequence from clone RP6-11O7 on... 40 7.0
50emb|Z68137.1|CTGROESEL C.thermocellum groES and groEL genes 40 7.0
51emb|X15646.1|SPSTR Spirulina platensis str operon containing the... 40 7.0
52emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen... 40 7.0
53gb|DQ345639.1| Uncultured bacterium clone Red_10 16S ribosomal R... 40 7.0
54dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
55emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chrom... 40 7.0
56emb|AJ416662.1|GPR416662 Uncultured gamma proteobacterium partia... 40 7.0
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0 
>ref|XM_478639.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1749

 Score =  347 bits (175), Expect = 2e-92
 Identities = 282/318 (88%)
 Strand = Plus / Minus

                                                                        
Query: 196  tcacttggcgccttgctcctcggcagcagcagagagcttgtactggaggtaggctttgat 255
            ||||||| ||| ||||||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 1505 tcacttgacgctttgctcctcagcagcggcagagagcttgtacttgaggtaggctctgat 1446

                                                                        
Query: 256  gaagggatccagctcgccatccatcacaccgctgatgtccgacgtttcacacgccgtccg 315
            |||||  ||||||||||| ||||| || ||| ||||||||||||| || || || || ||
Sbjct: 1445 gaaggtgtccagctcgccgtccatgacgccggtgatgtccgacgtctcgcaggcggtgcg 1386

                                                                        
Query: 316  aacgtccttgacgagcttgtaggggtggaagacatagttgcgtatctgttgcccccactc 375
             |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 1385 gacgtccttgacgagcttgtaggggtggaagacgtagttgcggatctgctgcccccactc 1326

                                                                        
Query: 376  tgccttcaccgcgtcaccacggatctgcttgatctccgacgcacgctgctcctcggcgat 435
             |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1325 cgccttcaccgcgtcgccgcggatctgcttgatctccgacgcccgctgctcctcggcgat 1266

                                                                        
Query: 436  caccagaagctttgccttcagccgtcttagggcctttatcttgttagctagctgactcct 495
            |||||| ||||| ||||||||||| || ||||||||||||||||| || | ||| |||||
Sbjct: 1265 caccagcagcttcgccttcagccggctcagggcctttatcttgttggccaactggctcct 1206

                              
Query: 496  ctcctntgcacaacgaac 513
            ||||| ||  ||||||||
Sbjct: 1205 ctcctctgtgcaacgaac 1188
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>dbj|AK065606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034A05, full
            insert sequence
          Length = 1749

 Score =  347 bits (175), Expect = 2e-92
 Identities = 282/318 (88%)
 Strand = Plus / Minus

                                                                        
Query: 196  tcacttggcgccttgctcctcggcagcagcagagagcttgtactggaggtaggctttgat 255
            ||||||| ||| ||||||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 1505 tcacttgacgctttgctcctcagcagcggcagagagcttgtacttgaggtaggctctgat 1446

                                                                        
Query: 256  gaagggatccagctcgccatccatcacaccgctgatgtccgacgtttcacacgccgtccg 315
            |||||  ||||||||||| ||||| || ||| ||||||||||||| || || || || ||
Sbjct: 1445 gaaggtgtccagctcgccgtccatgacgccggtgatgtccgacgtctcgcaggcggtgcg 1386

                                                                        
Query: 316  aacgtccttgacgagcttgtaggggtggaagacatagttgcgtatctgttgcccccactc 375
             |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 1385 gacgtccttgacgagcttgtaggggtggaagacgtagttgcggatctgctgcccccactc 1326

                                                                        
Query: 376  tgccttcaccgcgtcaccacggatctgcttgatctccgacgcacgctgctcctcggcgat 435
             |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1325 cgccttcaccgcgtcgccgcggatctgcttgatctccgacgcccgctgctcctcggcgat 1266

                                                                        
Query: 436  caccagaagctttgccttcagccgtcttagggcctttatcttgttagctagctgactcct 495
            |||||| ||||| ||||||||||| || ||||||||||||||||| || | ||| |||||
Sbjct: 1265 caccagcagcttcgccttcagccggctcagggcctttatcttgttggccaactggctcct 1206

                              
Query: 496  ctcctntgcacaacgaac 513
            ||||| ||  ||||||||
Sbjct: 1205 ctcctctgtgcaacgaac 1188
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  345 bits (174), Expect = 9e-92
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                            
Query: 196      tcacttggcgccttgctcctcggcagcagcagagagcttgtactggaggtaggctttgat 255
                ||||||| ||| ||||||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 21614891 tcacttgacgctttgctcctcagcagcggcagagagcttgtacttgaggtaggctctgat 21614950

                                                                            
Query: 256      gaagggatccagctcgccatccatcacaccgctgatgtccgacgtttcacacgccgtccg 315
                |||||  ||||||||||| ||||| || ||| ||||||||||||| || || || || ||
Sbjct: 21614951 gaaggtgtccagctcgccgtccatgacgccggtgatgtccgacgtctcgcaggcggtgcg 21615010

                                                                            
Query: 316      aacgtccttgacgagcttgtaggggtggaagacatagttgcgtatctgttgcccccactc 375
                 |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 21615011 gacgtccttgacgagcttgtaggggtggaagacgtagttgcggatctgctgcccccactc 21615070

                                                                            
Query: 376      tgccttcaccgcgtcaccacggatctgcttgatctccgacgcacgctgctcctcggcgat 435
                 |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21615071 cgccttcaccgcgtcgccgcggatctgcttgatctccgacgcccgctgctcctcggcgat 21615130

                                                                            
Query: 436      caccagaagctttgccttcagccgtcttagggcctttatcttgttagctagctgactcct 495
                |||||| ||||| ||||||||||| || ||||||||||||||||| || | ||| |||||
Sbjct: 21615131 caccagcagcttcgccttcagccggctcagggcctttatcttgttggccaactggctcct 21615190

                         
Query: 496      ctcctntgc 504
                ||||| |||
Sbjct: 21615191 ctcctctgc 21615199
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>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1612_A04
          Length = 124833

 Score =  345 bits (174), Expect = 9e-92
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                         
Query: 196   tcacttggcgccttgctcctcggcagcagcagagagcttgtactggaggtaggctttgat 255
             ||||||| ||| ||||||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 45347 tcacttgacgctttgctcctcagcagcggcagagagcttgtacttgaggtaggctctgat 45406

                                                                         
Query: 256   gaagggatccagctcgccatccatcacaccgctgatgtccgacgtttcacacgccgtccg 315
             |||||  ||||||||||| ||||| || ||| ||||||||||||| || || || || ||
Sbjct: 45407 gaaggtgtccagctcgccgtccatgacgccggtgatgtccgacgtctcgcaggcggtgcg 45466

                                                                         
Query: 316   aacgtccttgacgagcttgtaggggtggaagacatagttgcgtatctgttgcccccactc 375
              |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 45467 gacgtccttgacgagcttgtaggggtggaagacgtagttgcggatctgctgcccccactc 45526

                                                                         
Query: 376   tgccttcaccgcgtcaccacggatctgcttgatctccgacgcacgctgctcctcggcgat 435
              |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 45527 cgccttcaccgcgtcgccgcggatctgcttgatctccgacgcccgctgctcctcggcgat 45586

                                                                         
Query: 436   caccagaagctttgccttcagccgtcttagggcctttatcttgttagctagctgactcct 495
             |||||| ||||| ||||||||||| || ||||||||||||||||| || | ||| |||||
Sbjct: 45587 caccagcagcttcgccttcagccggctcagggcctttatcttgttggccaactggctcct 45646

                      
Query: 496   ctcctntgc 504
             ||||| |||
Sbjct: 45647 ctcctctgc 45655
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>ref|XM_386009.1| Gibberella zeae PH-1 chromosome 3 predicted protein (FG05833.1)
           partial mRNA
          Length = 1017

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 358 tatctgttgcccccactctgccttcac 384
           |||||||||||||||| ||||||||||
Sbjct: 486 tatctgttgcccccaccctgccttcac 460
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>gb|AF320250.2|AF320250 Lactobacillus delbrueckii YmdA (ymdA) gene, partial cds; RgpG (rgpG),
            YvyE (yvyE), ComF1 (comF1), ComF3 (comF3), YvyD (yvyD),
            SecA (secA), RF2 (rf2), MP1 (mp1), HprK (hprK), LGT
            (lgt), GpsA (gpsA), TrxB (trxB), and UvrB (uvrB) genes,
            complete cds; and UvrA (uvrA) gene, partial cds
          Length = 16561

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 237  actggaggtaggctttgatgaagggatccagctcgccatccatcacaccgc 287
            |||| |||||||| | |||||||||||||||||  || |||||||| ||||
Sbjct: 9151 actgcaggtaggcgtagatgaagggatccagcttcccgtccatcaccccgc 9101
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>gb|AY691215.1| Butyrivibrio crossotus 60 kDa chaperonin (cpn60) gene, partial cds
          Length = 552

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 83  agcctctgtaaaactgcataccttca 108
           ||||||||| ||||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttca 294
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>gb|AF437103.1| Uncultured pig faeces bacterium clone 010_C09 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 83  agcctctgtaaaactgcataccttca 108
           ||||||||| ||||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttca 294
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>ref|XM_755381.1| Ustilago maydis 521 hypothetical protein (UM04327.1) partial mRNA
          Length = 3279

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 205  gccttgctcctcggcagcagca 226
            ||||||||||||||||||||||
Sbjct: 3125 gccttgctcctcggcagcagca 3104
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>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7
          Length = 318136

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 334   gtaggggtggaagacatagttgcgtatctg 363
             |||||| ||||||||||||||||| |||||
Sbjct: 80131 gtagggatggaagacatagttgcggatctg 80102



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 416   gcacgctgctcctcggcgatcacca 440
             ||||||||||||| |||||||||||
Sbjct: 80049 gcacgctgctcctgggcgatcacca 80025
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>emb|AJ635428.1| Cucumis sativus mRNA for putative translation releasing factor 2 (rf2
            gene)
          Length = 1533

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 242  aggtaggctttgatgaagggatccagctcgccatccat 279
            ||||| |||||||||||||| ||||  |||||||||||
Sbjct: 1332 aggtaagctttgatgaagggctccaattcgccatccat 1295
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 253    gatgaagggatccagctcgccatccatcac 282
              ||||||||||||||||||||| || |||||
Sbjct: 159562 gatgaagggatccagctcgccgtcgatcac 159533
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>gb|BC039700.1| Mus musculus myosin ID, mRNA (cDNA clone IMAGE:3661639)
          Length = 4470

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  ccggctcaatcagccacagcc 135
            |||||||||||||||||||||
Sbjct: 2314 ccggctcaatcagccacagcc 2334
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>gb|AY691242.1| Clostridium xylanolyticum 60 kDa chaperonin (cpn60) gene, partial
           cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437240.1| Uncultured pig faeces bacterium clone 018_F11 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437214.1| Uncultured pig faeces bacterium clone 017_D11 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437170.1| Uncultured pig faeces bacterium clone 014_D08 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437163.1| Uncultured pig faeces bacterium clone 014_B04 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437125.1| Uncultured pig faeces bacterium clone 011_B05 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437094.1| Uncultured pig faeces bacterium clone 009_G05 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437064.1| Uncultured pig faeces bacterium clone 007_H12 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437041.1| Uncultured pig faeces bacterium clone 006_G04 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437031.1| Uncultured pig faeces bacterium clone 006_E01 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF437006.1| Uncultured pig faeces bacterium clone 005_E06 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF436999.1| Uncultured pig faeces bacterium clone 005_D02 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF436964.1| Uncultured pig faeces bacterium clone 003_D06 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AF436915.1| Uncultured pig faeces bacterium clone 001_H02 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 83  agcctctgtaaaactgcataccttc 107
           ||||||||| |||||||||||||||
Sbjct: 319 agcctctgtcaaactgcataccttc 295
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>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence
          Length = 278583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 155    tcaaaattccatactgctaccttga 179
              ||||||||||| |||||||||||||
Sbjct: 175799 tcaaaattccaaactgctaccttga 175775
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>emb|CR688129.2|CNS0FTWT Tetraodon nigroviridis full-length cDNA
          Length = 1445

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 tcctcggcagcagcagagagc 232
           |||||||||||||||||||||
Sbjct: 764 tcctcggcagcagcagagagc 784
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>emb|CR683748.1|CNS0FQJ4 Tetraodon nigroviridis full-length cDNA
          Length = 1429

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 tcctcggcagcagcagagagc 232
           |||||||||||||||||||||
Sbjct: 759 tcctcggcagcagcagagagc 779
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>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the 3'
              end of the Myo1d gene for myosin ID, two novel genes, the
              Cdk5r gene for cyclin-dependent kinase 5 regulatory subunit
              (p35), the Psmd11 gene for non-ATPase proteasome (prosome,
              macropain) 26S subunit 11, the Zfp207 gene for zinc finger
              protein 207 and the 3' end of the Rhbdl4 gene for rhomboid
              veinlet-like 4 (Drosophila), complete sequence
          Length = 195208

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    ccggctcaatcagccacagcc 135
              |||||||||||||||||||||
Sbjct: 151805 ccggctcaatcagccacagcc 151785
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>dbj|AK148112.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library,
            clone:G370022A17 product:MYO1D protein (Fragment) homolog
            [Homo sapiens], full insert sequence
          Length = 3472

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  ccggctcaatcagccacagcc 135
            |||||||||||||||||||||
Sbjct: 1301 ccggctcaatcagccacagcc 1321
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>gb|BC034071.1| Mus musculus myosin ID, mRNA (cDNA clone IMAGE:4218313), partial cds
          Length = 3371

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  ccggctcaatcagccacagcc 135
            |||||||||||||||||||||
Sbjct: 1162 ccggctcaatcagccacagcc 1182
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 422     tgctcctcggcgatcaccagaagctttgccttcagc 457
               ||||||| |||||||||||| ||||| ||| |||||
Sbjct: 2249339 tgctcctgggcgatcaccagcagcttggccatcagc 2249304
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>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0003P07, complete sequence
          Length = 175116

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aaaagcctctgtaaaactgc 99
             ||||||||||||||||||||
Sbjct: 98610 aaaagcctctgtaaaactgc 98591
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>gb|AY691311.1| Clostridium cellulolyticum 60 kDa chaperonin (cpn60) gene, partial
           cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AY691269.1| Oxobacter pfennigii 60 kDa chaperonin (cpn60) gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AY691227.1| Clostridium cellobioparum 60 kDa chaperonin (cpn60) gene, partial
           cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AY691223.1| Clostridium aerotolerans 60 kDa chaperonin (cpn60) gene, partial
           cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AF437261.1| Uncultured pig faeces bacterium clone P40-0009 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AF436943.1| Uncultured pig faeces bacterium clone 002_G03 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|DQ106218.1| Uncultured bacterium clone ce1_cl71_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|DQ106203.1| Uncultured bacterium clone ce1_cl56_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|DQ106033.1| Uncultured bacterium clone ce0_cl0_sn44 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 317 cctctgtcaaactgcataccttca 294
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>gb|AY277971.1| Takifugu rubripes transcription factor Sox6a (Sox6a) gene, complete cds
          Length = 66784

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   ccccactctgccttcaccgc 387
             ||||||||||||||||||||
Sbjct: 23902 ccccactctgccttcaccgc 23883
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>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence
          Length = 160892

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     acaaagactacgacaaccgcaaaa 83
              ||||| ||||||||||||||||||
Sbjct: 110024 acaaaaactacgacaaccgcaaaa 110047
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>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    acaaagactacgacaaccgcaaaa 83
             ||||| ||||||||||||||||||
Sbjct: 41880 acaaaaactacgacaaccgcaaaa 41903
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>gb|DQ099905.1| Brachyspira hyodysenteriae strain ATCC 27164 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 555

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cctctgtaaaactgcataccttca 108
           ||||||| ||||||||||||||||
Sbjct: 320 cctctgtcaaactgcataccttca 297
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>emb|AL031589.10|HS11O7 Human DNA sequence from clone RP6-11O7 on chromosome 22q13.1-13.2,
             complete sequence
          Length = 115932

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttacttggctgtttttcata 34
             ||||||||||||||||||||
Sbjct: 84722 ttacttggctgtttttcata 84741
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>emb|Z68137.1|CTGROESEL C.thermocellum groES and groEL genes
          Length = 2204

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 85   cctctgtaaaactgcataccttca 108
            ||||||| ||||||||||||||||
Sbjct: 1065 cctctgtcaaactgcataccttca 1042
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>emb|X15646.1|SPSTR Spirulina platensis str operon containing the rpsL gene, rpsG gene,
           fus gene and tuf gene for ribosomal protein S12,
           ribosomal protein S7, translation elongation factor EF-G
           and translation elongation factor EF-Tu respectively
          Length = 5273

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 atcagccacagccaacgatg 142
           ||||||||||||||||||||
Sbjct: 253 atcagccacagccaacgatg 272
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>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7
          Length = 344615

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 422    tgctcctcggcgatcaccagaagctttgcctt 453
              ||||||| |||||||||||| ||||| |||||
Sbjct: 124707 tgctcctgggcgatcaccagcagcttggcctt 124676
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>gb|DQ345639.1| Uncultured bacterium clone Red_10 16S ribosomal RNA gene, partial
           sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 cggcagcagcagagagcttg 235
           ||||||||||||||||||||
Sbjct: 32  cggcagcagcagagagcttg 51
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      aaaagcctctgtaaaactgc 99
               ||||||||||||||||||||
Sbjct: 6380580 aaaagcctctgtaaaactgc 6380561
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>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete
             sequence
          Length = 237321

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   actggaggtaggctttgatg 256
             ||||||||||||||||||||
Sbjct: 48103 actggaggtaggctttgatg 48084
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>emb|AJ416662.1|GPR416662 Uncultured gamma proteobacterium partial 16S rRNA gene, clone
           env.S047
          Length = 510

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 cggcagcagcagagagcttg 235
           ||||||||||||||||||||
Sbjct: 60  cggcagcagcagagagcttg 79
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      aaaagcctctgtaaaactgc 99
               ||||||||||||||||||||
Sbjct: 6382566 aaaagcctctgtaaaactgc 6382547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,536,482
Number of Sequences: 3902068
Number of extensions: 3536482
Number of successful extensions: 61231
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61098
Number of HSP's gapped (non-prelim): 133
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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