>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
 Frame = +1

Query: 136 PSDSNSKLINRQVHLLKPSDASTV*RTSPTFPSNQQQAFQHPVLPHHG----PRIHI*SF 303
           P  + S L N     L  + +++V + S + P    Q   HP    HG    P+      
Sbjct: 342 PHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHPQPSPHPPHRPHGLPQHPQRSPHPA 401

Query: 304 PCSS*HQQLGSPFFPAGSCPNR--QQQQFFQHPVSTHQSP 417
           P    H QL SP  P    P++  Q     QH   THQ+P
Sbjct: 402 PHPQQHSQLQSP-HPQHPSPHQHIQHHPNHQHQTLTHQAP 440

>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated|
           protein 10)
          Length = 1563

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -2

Query: 412 SDVLIPDAGKTAAADGLDKSQLGRRGFPAADARMNKERIRYVYGDRDVAKPDAGRPAAGL 233
           +  ++   GKTA  D +  S + R    + +    K+ +RY+YGD      D+    AG+
Sbjct: 499 TSAVVASGGKTAFHDDMGASNVQRL---SEECNSEKDLLRYIYGDH--KNSDSSSLGAGV 553

Query: 232 KGKWGKYVI 206
            G  G  V+
Sbjct: 554 GGSGGGGVL 562

>Y038_WOLTR (Q5GTP4) UPF0176 protein Wbm0038|
          Length = 269

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -1

Query: 266 KTGCWKACCW-FEGKVGEVRYTVDASEGLRRWTCLFISLELLSDGLKKVAVGQLILFCMS 90
           K G W+  C+ F+ ++  +  ++  S  ++   C+F S ++ +D LK V+ GQ++  C  
Sbjct: 212 KNGNWEGECFVFDDRIA-INSSLAPSNKIK---CIFCSNQVSADELKSVSRGQVV--CSD 265

Query: 89  LNPS 78
            NPS
Sbjct: 266 CNPS 269

>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 17/60 (28%), Positives = 21/60 (35%)
 Frame = -1

Query: 407 CVDTGCWKNCCC*RFGQEPAGKKGLPSC*C*DEQGKD*ICIRGP*CGKTGCWKACCWFEG 228
           C    C+K CCC        G     S  C     +   C   P C ++ C K CC   G
Sbjct: 126 CSQCSCYKPCCC----SSGCGSSCCQSSCCKPSCSQSSCC--KPCCSQSSCCKPCCCSSG 179

>TF3C2_MOUSE (Q8BL74) General transcription factor 3C polypeptide 2|
           (Transcription factor IIIC-beta subunit) (TF3C-beta)
           (TFIIIC 110 kDa subunit) (TFIIIC110)
          Length = 907

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 435 LSSIAFILASKPSGKSGGRTTHGRCGHEGSWPP 533
           +S ++   ASKPSG+ GGRT  G    +   PP
Sbjct: 86  MSKVSNTRASKPSGRRGGRTARGAKRPQQRKPP 118

>PDXH_NEIMB (Q9JYZ5) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 210

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -2

Query: 610 VDNGTCYGCKKPNVGMKHPIDAGKYKGGHDPSWPQRPCVVLPPDLPEGFDAKMKAMEERI 431
           + N      K   VG+KHP+        H P  P     ++ PDL E +  +   + +RI
Sbjct: 143 IPNKAVLVAKAAAVGLKHPL--------HVPRPPHWGGYIVIPDLLEFWQGRPSRLHDRI 194

Query: 430 RYQFQD 413
           +Y+  D
Sbjct: 195 QYRLLD 200

>PDXH_NEIMA (Q9JTZ1) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 210

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -2

Query: 610 VDNGTCYGCKKPNVGMKHPIDAGKYKGGHDPSWPQRPCVVLPPDLPEGFDAKMKAMEERI 431
           + N      K   VG+KHP+        H P  P     ++ PDL E +  +   + +RI
Sbjct: 143 IPNKAVLVAKAAAVGLKHPL--------HVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRI 194

Query: 430 RYQFQD 413
           +Y+  D
Sbjct: 195 QYRLLD 200

>PDXH_NEIG1 (Q5F8V2) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 210

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -2

Query: 610 VDNGTCYGCKKPNVGMKHPIDAGKYKGGHDPSWPQRPCVVLPPDLPEGFDAKMKAMEERI 431
           + N      K   VG+KHP+        H P  P     ++ PDL E +  +   + +RI
Sbjct: 143 IPNKAVLVAKAAAVGLKHPL--------HVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRI 194

Query: 430 RYQFQD 413
           +Y+  D
Sbjct: 195 QYRLLD 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,388,691
Number of Sequences: 219361
Number of extensions: 2360471
Number of successful extensions: 5844
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5813
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)