ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags9j06 | 679 | AV920173 | not_full | ref|XM_466592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3118 | 40 | not_full | CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 2) (CDK11) Length = 780 | 349 | -- | --- | - | -- | --- | - |
| rbags9j05 | 99 | AV834283 | not_full | ref|NM_115855.2| Arabidopsis thaliana ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor AT3G59920 (ATGDI2) mRNA, complete cds Length = 1683 | 5 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9j04 | 656 | AV920172 | not_full | dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 | 313 | not_full | RS4_MAIZE (O22424) 40S ribosomal protein S4 Length = 265 | 57 | -- | --- | - | -- | --- | - |
| rbags9j03 | 564 | AV920171 | not_full | ref|NM_191424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3327 | 51 | not_full | UBP21_SCHPO (Q9UTT1) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21) (Ubiquitin-specific processing protease 21) (Deubiquitinating enzyme 21) Length = 1129 | 5 | -- | --- | - | -- | --- | - |
| rbags9j01 | 659 | AV920170 | not_full | gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 | 413 | not_full | UBC11_ARATH (P35134) Ubiquitin-conjugating enzyme E2-17 kDa 11 (EC 6.3.2.19) (Ubiquitin-protein ligase 11) (Ubiquitin carrier protein 11) Length = 148 | 197 | -- | --- | - | -- | --- | - |
| rbags9i24 | 617 | AV920169 | not_full | dbj|AK098870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A22, full insert sequence Length = 1728 | 68 | not_full | F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein FAM10A1) Length = 368 | 10 | -- | --- | - | -- | --- | - |
| rbags9i23 | 642 | AV920168 | not_full | ref|XM_469473.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1636 | 85 | not_full | VO01_VACCV (Q80HX1) Protein O1 Length = 666 | 1 | -- | --- | - | -- | --- | - |
| rbags9i22 | 243 | AV920167 | not_full | gb|AF542191.1| Triticum aestivum ribosomal protein S8-like mRNA, complete sequence Length = 806 | 216 | not_full | RS8_ORYSA (P49199) 40S ribosomal protein S8 Length = 220 | 23 | -- | --- | - | -- | --- | - |
| rbags9i21 | 58 | AV834282 | not_full | gb|BT016329.1| Zea mays clone Contig162 mRNA sequence Length = 1199 | 14 | not_full | NUHM_ARATH (O22769) NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 255 | 1 | -- | --- | - | -- | --- | - |
| rbags9i20 | 524 | AV834281 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 32 | not_full | SYC_VIBF1 (Q5E4F1) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase) (CysRS) Length = 461 | 6 | -- | --- | - | -- | --- | - |
| rbags9i18 | 698 | AV920166 | not_full | ref|XM_470257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 | 78 | not_full | CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC 2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) Length = 1490 | 2 | -- | --- | - | -- | --- | - |
| rbags9i16 | 677 | AV920165 | not_full | emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 | 141 | not_full | FKB21_ARATH (Q38935) FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-1) Length = 153 | 199 | -- | --- | - | -- | --- | - |
| rbags9i15 | 675 | AV834280 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | ATPA_WHEAT (P12112) ATP synthase alpha chain (EC 3.6.3.14) (ATP synthase F1 sector alpha subunit) Length = 504 | 238 | -- | --- | - | -- | --- | - |
| rbags9i14 | 686 | AV920164 | not_full | dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 | 106 | not_full | UBE2N_RAT (Q9EQX9) Ubiquitin-conjugating enzyme E2 N (EC 6.3.2.19) (Ubiquitin-protein ligase N) (Ubiquitin carrier protein N) (Bendless-like ubiquitin-conjugating enzyme) Length = 152 | 180 | -- | --- | - | -- | --- | - |
| rbags9i11 | 749 | AV920163 | not_full | gb|BT009359.1| Triticum aestivum clone wlm96.pk025.c3:fis, full insert mRNA sequence Length = 1308 | 82 | not_full | COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 | 70 | -- | --- | - | -- | --- | - |
| rbags9i08 | 547 | AV920162 | not_full | gb|AY846821.1| Triticum aestivum ribosomal protein L10A mRNA, complete cds Length = 788 | 500 | not_full | R10AB_ARATH (P59230) 60S ribosomal protein L10a-2 Length = 216 | 75 | -- | --- | - | -- | --- | - |
| rbags9i07 | 561 | AV920161 | not_full | gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 | 96 | not_full | Y1773_SYNY3 (P73623) Hypothetical protein sll1773 Length = 232 | 4 | -- | --- | - | -- | --- | - |
| rbags9i06 | 716 | AV920160 | not_full | emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase Length = 1710 | 53 | not_full | XYLA_HORVU (Q40082) Xylose isomerase (EC 5.3.1.5) Length = 479 | 68 | -- | --- | - | -- | --- | - |
| rbags9i05 | 759 | AV920159 | not_full | gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 | 70 | not_full | ITA7_MOUSE (Q61738) Integrin alpha-7 precursor [Contains: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain] Length = 1179 | 10 | -- | --- | - | -- | --- | - |
| rbags9i04 | 245 | AV920158 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 131 | not_full | RS23_SPOFR (Q962Q7) 40S ribosomal protein S23 Length = 143 | 28 | -- | --- | - | -- | --- | - |
| rbags9i03 | 563 | AV920157 | not_full | ref|NM_188621.1| Oryza sativa (japonica cultivar-group), Ozsa8224 predicted mRNA Length = 603 | 156 | not_full | RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) Length = 119 | 5 | -- | --- | - | -- | --- | - |
| rbags9i02 | 585 | AV920156 | not_full | gb|BT009285.1| Triticum aestivum clone wlm0.pk0010.f6:fis, full insert mRNA sequence Length = 1418 | 38 | not_full | YHEB_CHLVI (P56160) Hypothetical 28.2 kDa protein in hemB 3NULLregion Length = 261 | 17 | -- | --- | - | -- | --- | - |
| rbags9i01 | 699 | AV920155 | not_full | dbj|AK099198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115B14, full insert sequence Length = 1057 | 50 | not_full | SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP) Length = 381 | 15 | -- | --- | - | -- | --- | - |
| rbags9h24 | 721 | AV920154 | not_full | gb|AY107912.1| Zea mays PCO105578 mRNA sequence Length = 749 | 159 | not_full | CYB5_ORYSA (P49100) Cytochrome b5 Length = 137 | 91 | -- | --- | - | -- | --- | - |
| rbags9h22 | 629 | AV920153 | not_full | dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G06, full insert sequence Length = 1392 | 60 | not_full | SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylase (EC 1.-.-.-) (IPC-B hydroxylase) Length = 384 | 10 | -- | --- | - | -- | --- | - |
| rbags9h21 | 519 | AV920152 | not_full | ref|XM_473060.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 459 | 463 | not_full | RL23A_TOBAC (Q07761) 60S ribosomal protein L23a (L25) Length = 154 | 52 | -- | --- | - | -- | --- | - |
| rbags9h19 | 541 | AV920151 | not_full | ref|XM_476895.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 | 500 | not_full | RS15_PICMA (O65059) 40S ribosomal protein S15 Length = 151 | 280 | -- | --- | - | -- | --- | - |
| rbags9h18 | 670 | AV920150 | not_full | gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds Length = 686 | 61 | not_full | RL6_MESCR (P34091) 60S ribosomal protein L6 (YL16-like) Length = 234 | 39 | -- | --- | - | -- | --- | - |
| rbags9h17 | 678 | AV920149 | not_full | gb|BT009285.1| Triticum aestivum clone wlm0.pk0010.f6:fis, full insert mRNA sequence Length = 1418 | 50 | not_full | YHEB_CHLVI (P56160) Hypothetical 28.2 kDa protein in hemB 3NULLregion Length = 261 | 25 | -- | --- | - | -- | --- | - |
| rbags9h16 | 654 | AV920148 | not_full | ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 | 265 | not_full | TIP12_ORYSA (Q94CS9) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein 1.2) (OsTIP1.2) Length = 252 | 183 | -- | --- | - | -- | --- | - |
| rbags9h15 | 729 | AV920147 | not_full | gb|BT008915.1| Triticum aestivum clone wpa1c.pk004.i4:fis, full insert mRNA sequence Length = 2453 | 155 | not_full | ACSL1_HUMAN (P33121) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase 1) (Long-chain fatty acid CoA ligase 2) (Long-chain acyl-CoA synthetase 2) (LACS 2) (Acyl-CoA synthetase 1) (ACS1) (Pa | 30 | -- | --- | - | -- | --- | - |
| rbags9h14 | 611 | AV920146 | not_full | dbj|AK101024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D19, full insert sequence Length = 2454 | 37 | not_full | MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) Length = 601 | 77 | -- | --- | - | -- | --- | - |
| rbags9h13 | 659 | AV920145 | not_full | ref|XM_470280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 | 63 | not_full | ENC1_MOUSE (O35709) Ectoderm-neural cortex 1 protein (ENC-1) Length = 589 | 68 | -- | --- | - | -- | --- | - |
| rbags9h10 | 471 | AV834279 | not_full | ref|XM_466770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2261 | 34 | not_full | PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) Length = 518 | 43 | -- | --- | - | -- | --- | - |
| rbags9h08 | 706 | AV920144 | not_full | dbj|AK071413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092I05, full insert sequence Length = 1568 | 61 | not_full | CSN4_ARATH (Q8L5U0) COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4) Length = 397 | 36 | -- | --- | - | -- | --- | - |
| rbags9h04 | 614 | AV920143 | not_full | gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 | 500 | not_full | CYPH_MAIZE (P21569) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 172 | 206 | -- | --- | - | -- | --- | - |
| rbags9h03 | 613 | AV920142 | not_full | gb|DQ314285.1| Hordeum vulgare cultivar Moscovskiy 121 Na+,K+/H+ exchanger mRNA, partial cds Length = 1790 | 81 | not_full | EUTC_PSEAE (Q9HX02) Ethanolamine ammonia-lyase light chain (EC 4.3.1.7) (Ethanolamine ammonia-lyase small subunit) Length = 273 | 3 | -- | --- | - | -- | --- | - |
| rbags9h02 | 694 | AV920141 | not_full | dbj|AK102430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093H13, full insert sequence Length = 2402 | 28 | not_full | FLII_DROME (Q24020) Protein flightless-1 (Flightless-I) Length = 1256 | 172 | -- | --- | - | -- | --- | - |
| rbags9h01 | 589 | AV920140 | not_full | gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 | 58 | not_full | CCDC4_HUMAN (Q6ZU67) Coiled-coil domain-containing protein 4 Length = 530 | 14 | -- | --- | - | -- | --- | - |
| rbags9g24 | 619 | AV920139 | not_full | dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 | 59 | not_full | RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protein type 3 Length = 1333 | 9 | -- | --- | - | -- | --- | - |
| rbags9g22 | 605 | AV834278 | not_full | gb|BT008978.1| Triticum aestivum clone wdk2c.pk005.h13:fis, full insert mRNA sequence Length = 702 | 500 | not_full | SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) Length = 602 | 500 | -- | --- | - | -- | --- | - |
| rbags9g21 | 601 | AV920138 | not_full | emb|X15232.1|TAPGKCYT Wheat mRNA for cytosolic phosphoglycerate kinase (EC 2.7.2.3) Length = 1473 | 211 | not_full | PGKY_WHEAT (P12783) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) Length = 401 | 263 | -- | --- | - | -- | --- | - |
| rbags9g20 | 581 | AV920137 | not_full | gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full insert mRNA sequence Length = 788 | 105 | not_full | GSTF3_MAIZE (P04907) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST class-phi) Length = 221 | 61 | -- | --- | - | -- | --- | - |
| rbags9g17 | 665 | AV920136 | not_full | emb|AJ277210.1|ASA277210 Avena sativa mRNA for chlorophyll synthase (chlG gene) Length = 1428 | 23 | not_full | MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS) (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 560 | 1 | -- | --- | - | -- | --- | - |
| rbags9g15 | 677 | AV834277 | not_full | gb|U76747.1|TAU76747 Triticum aestivum Tap mRNA, partial cds Length = 621 | 44 | not_full | TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12) Length = 1992 | 59 | -- | --- | - | -- | --- | - |
| rbags9g14 | 559 | AV920135 | not_full | emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 | 199 | not_full | NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3) (CW20) (CW-20) (CW-19) Length = 118 | 82 | -- | --- | - | -- | --- | - |
| rbags9g13 | 697 | AV920134 | not_full | dbj|AK071001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J15, full insert sequence Length = 1443 | 97 | not_full | MUC1_YEAST (P08640) Mucin-like protein 1 precursor Length = 1367 | 25 | -- | --- | - | -- | --- | - |
| rbags9g12 | 669 | AV920133 | not_full | gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 | 79 | not_full | ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 581 | 17 | -- | --- | - | -- | --- | - |
| rbags9g09 | 677 | AV920132 | not_full | gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds Length = 983 | 77 | not_full | COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 | 46 | -- | --- | - | -- | --- | - |
| rbags9g08 | 712 | AV920131 | not_full | ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 | 86 | not_full | RS12_HORVU (Q9XHS0) 40S ribosomal protein S12 Length = 143 | 80 | -- | --- | - | -- | --- | - |
