Clone Name | rbags9i03 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_188621.1| Oryza sativa (japonica cultivar-group), Ozsa8224 predicted mRNA Length = 603 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Minus Query: 345 caccaatgaccacctggaagatggcggagttgggggagaccatggtgaaggaggactgga 404 |||| |||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||| Sbjct: 454 caccgatgatcacctggaagacggcggagctgggggagaccatggcgaaggaggactgga 395 Query: 405 cgccgccggacttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagg 464 | ||| ||| | ||| ||||| | ||||||| |||||| |||||||||| ||||||| Sbjct: 394 ccccggcggccgagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagg 335 Query: 465 gggtggcggcggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccgg 524 |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| Sbjct: 334 gggtggcggcggaggcctcgagctcgcccttgagctgcttggccgtccactcctcgccgg 275 Query: 525 agtcgcggcacacgaaggtgaagacgcccatg 556 || ||||||||||||||| ||||||||||| Sbjct: 274 agctccggcacacgaaggtgtagacgcccatg 243 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 196 ctaatcaaagagggagaagccaaggtcgt 224 |||||||||||||||||| |||||||||| Sbjct: 603 ctaatcaaagagggagaatccaaggtcgt 575
>dbj|AK107453.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-C07, full insert sequence Length = 717 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Minus Query: 345 caccaatgaccacctggaagatggcggagttgggggagaccatggtgaaggaggactgga 404 |||| |||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||| Sbjct: 277 caccgatgatcacctggaagacggcggagctgggggagaccatggcgaaggaggactgga 218 Query: 405 cgccgccggacttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagg 464 | ||| ||| | ||| ||||| | ||||||| |||||| |||||||||| ||||||| Sbjct: 217 ccccggcggccgagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagg 158 Query: 465 gggtggcggcggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccgg 524 |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| Sbjct: 157 gggtggcggcggaggcctcgagctcgcccttgagctgcttggccgtccactcctcgccgg 98 Query: 525 agtcgcggcacacgaaggtgaagacgcccatg 556 || ||||||||||||||| ||||||||||| Sbjct: 97 agctccggcacacgaaggtgtagacgcccatg 66 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 194 atctaatcaaagagggagaagccaaggtcgt 224 |||||||||||||||||||| |||||||||| Sbjct: 428 atctaatcaaagagggagaatccaaggtcgt 398
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 356 acctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccggac 415 |||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||| ||| | Sbjct: 7278973 acctggaagacggcggagctgggggagaccatggcgaaggaggactggaccccggcggcc 7279032 Query: 416 ttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggcg 475 ||| ||||| | ||||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 7279033 gagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagggggtggcggcg 7279092 Query: 476 gaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggcac 535 ||||||||||||||||||||| |||||||||||| |||||| |||||||| |||||| Sbjct: 7279093 gaggcctcgagctcgcccttgagctgcttggccgtccactcctcgccggagctccggcac 7279152 Query: 536 acgaaggtgaagacgcccatg 556 ||||||||| ||||||||||| Sbjct: 7279153 acgaaggtgtagacgcccatg 7279173 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 194 atctaatcaaagagggagaagccaaggtcgt 224 |||||||||||||||||||| |||||||||| Sbjct: 7278019 atctaatcaaagagggagaatccaaggtcgt 7278049 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 42940798 cggaccagcagaggcaccac 42940779
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 208 bits (105), Expect = 1e-50 Identities = 177/201 (88%) Strand = Plus / Plus Query: 356 acctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccggac 415 |||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||| ||| | Sbjct: 80403 acctggaagacggcggagctgggggagaccatggcgaaggaggactggaccccggcggcc 80462 Query: 416 ttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggcg 475 ||| ||||| | ||||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 80463 gagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagggggtggcggcg 80522 Query: 476 gaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggcac 535 ||||||||||||||||||||| |||||||||||| |||||| |||||||| |||||| Sbjct: 80523 gaggcctcgagctcgcccttgagctgcttggccgtccactcctcgccggagctccggcac 80582 Query: 536 acgaaggtgaagacgcccatg 556 ||||||||| ||||||||||| Sbjct: 80583 acgaaggtgtagacgcccatg 80603 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 194 atctaatcaaagagggagaagccaaggtcgt 224 |||||||||||||||||||| |||||||||| Sbjct: 79449 atctaatcaaagagggagaatccaaggtcgt 79479
>dbj|AK121229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M16, full insert sequence Length = 642 Score = 206 bits (104), Expect = 6e-50 Identities = 185/212 (87%) Strand = Plus / Minus Query: 345 caccaatgaccacctggaagatggcggagttgggggagaccatggtgaaggaggactgga 404 ||||||||| ||||||||||| ||||||| |||| |||||||||| |||||||||||||| Sbjct: 279 caccaatgatcacctggaagacggcggagctgggcgagaccatggagaaggaggactgga 220 Query: 405 cgccgccggacttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagg 464 | ||| ||| | ||| ||||| | ||||||| |||||| |||||||||| ||||||| Sbjct: 219 ctccggcggccgagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagg 160 Query: 465 gggtggcggcggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccgg 524 ||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||| Sbjct: 159 gggtggcggcggaggcctccagctcgcccttgagctgcttggccgtccactcgtcgccgg 100 Query: 525 agtcgcggcacacgaaggtgaagacgcccatg 556 || ||||||||||||||| | ||||||||| Sbjct: 99 agctccggcacacgaaggtgtacacgcccatg 68 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/67 (86%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 263 gccttgggggcctcagcagcagctccacctgatgcagcggcaccagcagcggcaccacca 322 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 361 gccttgggggcctcggcagcagctccaccgga---ggcggcaccagcagcagcacctcca 305 Query: 323 ccgatcg 329 || |||| Sbjct: 304 ccaatcg 298
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 192 bits (97), Expect = 9e-46 Identities = 175/201 (87%) Strand = Plus / Plus Query: 356 acctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccggac 415 |||||||||| ||||||| |||| |||||||||| ||||||||||||||| ||| ||| | Sbjct: 29012785 acctggaagacggcggagctgggcgagaccatggagaaggaggactggactccggcggcc 29012844 Query: 416 ttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggcg 475 ||| ||||| | ||||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 29012845 gagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagggggtggcggcg 29012904 Query: 476 gaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggcac 535 |||||||| |||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 29012905 gaggcctccagctcgcccttgagctgcttggccgtccactcgtcgccggagctccggcac 29012964 Query: 536 acgaaggtgaagacgcccatg 556 ||||||||| | ||||||||| Sbjct: 29012965 acgaaggtgtacacgcccatg 29012985 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/67 (86%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 263 gccttgggggcctcagcagcagctccacctgatgcagcggcaccagcagcggcaccacca 322 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 29011777 gccttgggggcctcggcagcagctccaccgga---ggcggcaccagcagcagcacctcca 29011833 Query: 323 ccgatcg 329 || |||| Sbjct: 29011834 ccaatcg 29011840 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cagcagcggcaccaccaccg 325 |||||||||||||||||||| Sbjct: 24847757 cagcagcggcaccaccaccg 24847738
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 192 bits (97), Expect = 9e-46 Identities = 175/201 (87%) Strand = Plus / Plus Query: 356 acctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccggac 415 |||||||||| ||||||| |||| |||||||||| ||||||||||||||| ||| ||| | Sbjct: 27772 acctggaagacggcggagctgggcgagaccatggagaaggaggactggactccggcggcc 27831 Query: 416 ttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggcg 475 ||| ||||| | ||||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 27832 gagtcggcggcggacgcggcggcgacgaggcggcgctgcagctcgtagggggtggcggcg 27891 Query: 476 gaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggcac 535 |||||||| |||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 27892 gaggcctccagctcgcccttgagctgcttggccgtccactcgtcgccggagctccggcac 27951 Query: 536 acgaaggtgaagacgcccatg 556 ||||||||| | ||||||||| Sbjct: 27952 acgaaggtgtacacgcccatg 27972 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/67 (86%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 263 gccttgggggcctcagcagcagctccacctgatgcagcggcaccagcagcggcaccacca 322 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 26764 gccttgggggcctcggcagcagctccaccgga---ggcggcaccagcagcagcacctcca 26820 Query: 323 ccgatcg 329 || |||| Sbjct: 26821 ccaatcg 26827
>gb|AY023195.1| Oryza sativa microsatellite MRG5520 containing (GCG)X9, closest to marker C955, genomic sequence Length = 227 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 459 cgtagggggtggcggcggaggcctcgagctcgcccttgtgctgcttggccgaccactcgg 518 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 1 cgtagggggtggcggcggaggcctcgagctcgcccttgagctgcttggccgtccactcct 60 Query: 519 cgccggagtcgcggcacacgaaggtgaagacgcccatg 556 |||||||| ||||||||||||||| ||||||||||| Sbjct: 61 cgccggagctccggcacacgaaggtgtagacgcccatg 98
>gb|BT016372.1| Zea mays clone Contig205 mRNA sequence Length = 576 Score = 115 bits (58), Expect = 2e-22 Identities = 166/202 (82%) Strand = Plus / Minus Query: 355 cacctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccgga 414 ||||||||| | ||||||| |||||| |||||||| |||||| |||||||||||| || Sbjct: 223 cacctggaacacggcggagctgggggtgaccatggagaaggacgactggacgccgtaggc 164 Query: 415 cttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggc 474 ||| | ||| ||||||| | |||||| |||||||||| ||||| ||||| ||||| Sbjct: 163 agagtcggccgcggaggcggcagcgacgaggcggcgctgcagctcgtatggggtagcggc 104 Query: 475 ggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggca 534 ||| ||||||| |||||| |||||||||||| | ||||||| ||||| || |||||| Sbjct: 103 ggaagcctcgatctcgccggagtgctgcttggcggtccactcgccgccgttgttgcggca 44 Query: 535 cacgaaggtgaagacgcccatg 556 ||| |||||| ||||||||||| Sbjct: 43 cacaaaggtgtagacgcccatg 22
>gb|AY106007.1| Zea mays PCO073423 mRNA sequence Length = 775 Score = 115 bits (58), Expect = 2e-22 Identities = 166/202 (82%) Strand = Plus / Minus Query: 355 cacctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccgga 414 ||||||||| | ||||||| |||||| |||||||| |||||| |||||||||||| || Sbjct: 281 cacctggaacacggcggagctgggggtgaccatggagaaggacgactggacgccgtaggc 222 Query: 415 cttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggc 474 ||| | ||| ||||||| | |||||| |||||||||| ||||| ||||| ||||| Sbjct: 221 agagtcggccgcggaggcggcagcgacgaggcggcgctgcagctcgtatggggtagcggc 162 Query: 475 ggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggca 534 ||| ||||||| |||||| |||||||||||| | ||||||| ||||| || |||||| Sbjct: 161 ggaagcctcgatctcgccggagtgctgcttggcggtccactcgccgccgttgttgcggca 102 Query: 535 cacgaaggtgaagacgcccatg 556 ||| |||||| ||||||||||| Sbjct: 101 cacaaaggtgtagacgcccatg 80
>gb|U62751.1|ZMU62751 Zea mays acidic ribosomal protein P3a (rpp3a) mRNA, complete cds Length = 812 Score = 107 bits (54), Expect = 4e-20 Identities = 165/202 (81%) Strand = Plus / Minus Query: 355 cacctggaagatggcggagttgggggagaccatggtgaaggaggactggacgccgccgga 414 ||||||||| | ||||||| |||||| |||||||| |||||| |||||||||||| | Sbjct: 348 cacctggaacacggcggagctgggggtgaccatggagaaggacgactggacgccgtagcg 289 Query: 415 cttgtcctcggcgcaggcggcggagacgagctggcgctgcaggtcgtagggggtggcggc 474 ||| | ||| ||||||| | |||||| |||||||||| ||||| ||||| ||||| Sbjct: 288 agagtcggccgcggaggcggcagcgacgaggcggcgctgcagctcgtatggggtagcggc 229 Query: 475 ggaggcctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggca 534 ||| ||||||| |||||| |||||||||||| | ||||||| ||||| || |||||| Sbjct: 228 ggaagcctcgatctcgccggagtgctgcttggcggtccactcgccgccgttgttgcggca 169 Query: 535 cacgaaggtgaagacgcccatg 556 ||| |||||| ||||||||||| Sbjct: 168 cacaaaggtgtagacgcccatg 147
>dbj|AK106757.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D08, full insert sequence Length = 1031 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 480 cctcgagctcgcccttgtgctgcttggccgaccactcggcgccggagtcgcggcacacga 539 ||||||||||||||||| |||||||||||| |||||| |||||||| |||||||||| Sbjct: 130 cctcgagctcgcccttgagctgcttggccgtccactcctcgccggagctccggcacacga 71 Query: 540 aggtgaagacgcccatg 556 ||||| ||||||||||| Sbjct: 70 aggtgtagacgcccatg 54
>ref|NM_185037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2175 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 466 ggtggcggcggaggcctcgagctcgcc 492 ||||||||||||||||||||||||||| Sbjct: 771 ggtggcggcggaggcctcgagctcgcc 745
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 466 ggtggcggcggaggcctcgagctcgcc 492 ||||||||||||||||||||||||||| Sbjct: 33056918 ggtggcggcggaggcctcgagctcgcc 33056892 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 ctcagcagcagctccacctga 294 ||||||||||||||||||||| Sbjct: 34783018 ctcagcagcagctccacctga 34783038
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 466 ggtggcggcggaggcctcgagctcgcc 492 ||||||||||||||||||||||||||| Sbjct: 33147428 ggtggcggcggaggcctcgagctcgcc 33147402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 ctcagcagcagctccacctga 294 ||||||||||||||||||||| Sbjct: 34873090 ctcagcagcagctccacctga 34873110
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 466 ggtggcggcggaggcctcgagctcgcc 492 ||||||||||||||||||||||||||| Sbjct: 66390 ggtggcggcggaggcctcgagctcgcc 66416
>dbj|AK064790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C06, full insert sequence Length = 2309 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 466 ggtggcggcggaggcctcgagctcgcc 492 ||||||||||||||||||||||||||| Sbjct: 781 ggtggcggcggaggcctcgagctcgcc 755
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 411 cggacttgtcctcggcgcaggcg 433 ||||||||||||||||||||||| Sbjct: 2172586 cggacttgtcctcggcgcaggcg 2172564
>gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, complete sequence Length = 201687 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 4 tgacaaaaactataaactggtaa 26 ||||||||||||||||||||||| Sbjct: 141085 tgacaaaaactataaactggtaa 141107
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 297 cagcggcaccagcagcggcacc 318 |||||||||||||||||||||| Sbjct: 1050868 cagcggcaccagcagcggcacc 1050889
>ref|XM_838265.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1182) partial mRNA Length = 1017 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 297 cagcggcaccagcagcggcacc 318 |||||||||||||||||||||| Sbjct: 42 cagcggcaccagcagcggcacc 63
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggtggcggcggaggcctcgagctcg 490 ||||| |||||||||||||||||||| Sbjct: 5368623 gggtgccggcggaggcctcgagctcg 5368598
>emb|X85180.1|CHRPP1 C.herbarum mRNA for ribosomal protein P1 Length = 595 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggcaccaccaccg 325 |||||||||||| |||||||| |||||||| Sbjct: 312 gcagcggcaccaccagcggcagcaccaccg 283
>ref|XM_470327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 ctcagcagcagctccacctga 294 ||||||||||||||||||||| Sbjct: 2133 ctcagcagcagctccacctga 2153
>ref|XM_506907.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0096I06.18 patrial mRNA Length = 4167 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 ctcagcagcagctccacctga 294 ||||||||||||||||||||| Sbjct: 2133 ctcagcagcagctccacctga 2153
>gb|AF143273.1| Vitis vinifera microsatellite ssrVvUCH25 sequence Length = 92 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggcaccaccacc 324 ||||||||||||||||| |||||| |||| Sbjct: 45 gcagcggcaccagcagcagcaccagcacc 17
>gb|AY350713.1| Capsella rubella clone BAC Cr33L6, complete sequence Length = 74492 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 |||||||||||||||||||| ||||||| Sbjct: 22669 gcagctccacctgatgcagctccaccagc 22697
>gb|AY558358.1| Saccharomyces cerevisiae clone FLH111364.01X YKL153W gene, complete cds Length = 510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 68 gcagcggcaccagcagcggca 88
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 ctcagcagcagctccacctga 294 ||||||||||||||||||||| Sbjct: 79632 ctcagcagcagctccacctga 79612
>emb|CR658828.2|CNS0F7BM Tetraodon nigroviridis full-length cDNA Length = 986 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 gcagcggcaccagcagcggcaccaccacc 324 ||||| ||||||||||| ||||||||||| Sbjct: 226 gcagcagcaccagcagcagcaccaccacc 254
>emb|Z26877.1|SCDCHR11 S.cerevisiae (S288C) 36.2kb DNA fragment from chromosome 11 Length = 36272 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 27760 gcagcggcaccagcagcggca 27780
>emb|X76208.1|DMTMII D. melanogaster TmII gene for tropomyosin II Length = 15112 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 ||||||||| ||||||||||||| ||||| Sbjct: 14054 gcagctccagctgatgcagcggctccagc 14082
>emb|X06408.1|SCGPM Yeast GPM gene for phosphoglycerate mutase (EC 5.4.2.1) Length = 1154 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 974 gcagcggcaccagcagcggca 954
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 accacctggaagatggcggag 373 ||||||||||||||||||||| Sbjct: 21060 accacctggaagatggcggag 21080
>ref|NM_206495.1| Drosophila melanogaster Tropomyosin 1 CG4898-RK, transcript variant K (Tm1), mRNA Length = 1645 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 ||||||||| ||||||||||||| ||||| Sbjct: 1493 gcagctccagctgatgcagcggctccagc 1521
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tgcagcggcaccagcagcggc 315 ||||||||||||||||||||| Sbjct: 8205636 tgcagcggcaccagcagcggc 8205616
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 ||||||||| ||||||||||||| ||||| Sbjct: 66030 gcagctccagctgatgcagcggctccagc 66058
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 gcggcggagacgagctggcgc 451 ||||||||||||||||||||| Sbjct: 8923763 gcggcggagacgagctggcgc 8923783
>dbj|AP005687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0019B22 Length = 137457 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tgcagcggcaccagcagcggc 315 ||||||||||||||||||||| Sbjct: 129061 tgcagcggcaccagcagcggc 129041
>dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450F09 Length = 148752 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tgcagcggcaccagcagcggc 315 ||||||||||||||||||||| Sbjct: 29558 tgcagcggcaccagcagcggc 29538
>ref|XM_307376.2| Anopheles gambiae str. PEST ENSANGP00000013737 (ENSANGG00000011248), partial mRNA Length = 3474 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 cggcaccagcagcggcaccaccacc 324 ||||||||||||| ||||||||||| Sbjct: 3376 cggcaccagcagcagcaccaccacc 3352
>emb|X58789.1|SCGPM1 S.cerevisiae gene for phosphoglycerate mutase Length = 2432 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 1472 gcagcggcaccagcagcggca 1452
>emb|Z28152.1|SCYKL153W S.cerevisiae chromosome XI reading frame ORF YKL153w Length = 2581 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 1332 gcagcggcaccagcagcggca 1352
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 ||||||||| ||||||||||||| ||||| Sbjct: 110462 gcagctccagctgatgcagcggctccagc 110490
>gb|DQ332621.1| Synthetic construct Saccharomyces cerevisiae clone FLH201438.01X GPM1 gene, complete sequence Length = 744 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggca 316 ||||||||||||||||||||| Sbjct: 719 gcagcggcaccagcagcggca 699
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 gcaccagcagcggcaccacca 322 ||||||||||||||||||||| Sbjct: 2770366 gcaccagcagcggcaccacca 2770386
>gb|K02621.1|DROTRO12 D.melanogaster tropomyosin gene isoform 33 (9C), exon 10C Length = 797 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gcagctccacctgatgcagcggcaccagc 309 ||||||||| ||||||||||||| ||||| Sbjct: 645 gcagctccagctgatgcagcggctccagc 673
>ref|NM_125111.3| Arabidopsis thaliana structural constituent of ribosome AT5G57290 mRNA, complete cds Length = 643 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 274 caccaccaatgaccaccacgaagacggcggag 243
>ref|NM_001005872.1| Rattus norvegicus HIV-1 tat interactive protein, homolog (human) (Htatip), mRNA Length = 1975 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 1 ggaagatggcggaggtgggggaga 24
>ref|NM_189473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 1037 cggaccagcagaggcaccac 1018
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 150519 gcaccagcggcggcaccaccaccg 150542
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 9706 gcaccagcggcggcaccaccaccg 9729
>ref|XM_581934.2| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 1 (LOC505619), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 65 ggaagatggcggaggtgggggaga 88
>ref|XM_882546.1| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 8 (LOC505619), mRNA Length = 1865 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 67 ggaagatggcggaggtgggggaga 90
>ref|XM_882535.1| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 7 (LOC505619), mRNA Length = 1700 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 67 ggaagatggcggaggtgggggaga 90
>ref|XM_882530.1| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 6 (LOC505619), mRNA Length = 1862 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 67 ggaagatggcggaggtgggggaga 90
>ref|XM_882522.1| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 5 (LOC505619), mRNA Length = 883 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 67 ggaagatggcggaggtgggggaga 90
>ref|XM_882514.1| PREDICTED: Bos taurus similar to HIV-1 tat interactive protein, homolog, transcript variant 4 (LOC505619), mRNA Length = 1989 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 67 ggaagatggcggaggtgggggaga 90
>gb|BT025594.1| Arabidopsis thaliana At5g57290 mRNA, complete cds Length = 363 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 214 caccaccaatgaccaccacgaagacggcggag 183
>gb|BC064912.1| Homo sapiens HIV-1 Tat interacting protein, 60kDa, transcript variant 2, mRNA (cDNA clone MGC:70769 IMAGE:6067575), complete cds Length = 1985 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 2 ggaagatggcggaggtgggggaga 25
>ref|XM_324452.1| Neurospora crassa OR74A predicted protein (NCU05096.1) partial mRNA Length = 1290 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 922 caccagcagcggcaccacca 903
>ref|XM_951989.1| Neurospora crassa OR74A hypothetical protein (NCU05096.1) partial mRNA Length = 1290 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 922 caccagcagcggcaccacca 903
>gb|BC034255.1| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2, mRNA (cDNA clone MGC:7093 IMAGE:3157491), complete cds Length = 2525 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgggggcctcagcagcagct 286 |||||||||||||||||||| Sbjct: 728 tgggggcctcagcagcagct 709
>ref|XM_717187.1| Candida albicans SC5314 hypothetical protein (CaO19_12423), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 gcggcaccagcagcggcaccacca 322 |||| ||||||||||||||||||| Sbjct: 1592 gcggtaccagcagcggcaccacca 1615
>ref|XM_713003.1| Candida albicans SC5314 hypothetical protein (CaO19_5760), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggcacca 319 ||||||| |||||||||||||||| Sbjct: 554 gcagcggtaccagcagcggcacca 531
>ref|XM_712937.1| Candida albicans SC5314 hypothetical protein (CaO19_13183), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 gcagcggcaccagcagcggcacca 319 ||||||| |||||||||||||||| Sbjct: 554 gcagcggtaccagcagcggcacca 531
>ref|XM_676434.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8257.2), mRNA Length = 1494 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gcggcaccagcagcggcaccacca 322 ||||||||| |||||||||||||| Sbjct: 1127 gcggcaccaccagcggcaccacca 1104
>ref|XM_992308.1| PREDICTED: Mus musculus hypothetical protein LOC672273 (LOC672273), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 639 caccagcagcggcaccacca 620 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 558 caccagcagcggcaccacca 539
>ref|XM_979177.1| PREDICTED: Mus musculus hypothetical protein LOC665748 (LOC665748), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 375 caccagcagcggcaccacca 394 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 294 caccagcagcggcaccacca 313
>ref|XM_858603.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 22 (LOC484692), mRNA Length = 3217 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 981 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 1024
>ref|XM_858585.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 21 (LOC484692), mRNA Length = 3096 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 860 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 903
>ref|XM_858560.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 20 (LOC484692), mRNA Length = 3054 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 818 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 861
>ref|XM_858542.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 19 (LOC484692), mRNA Length = 2931 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 698 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 741
>ref|XM_858520.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 18 (LOC484692), mRNA Length = 2699 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 463 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 506
>ref|XM_858494.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 17 (LOC484692), mRNA Length = 2788 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 552 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 595
>ref|XM_846251.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 2 (LOC484692), mRNA Length = 2863 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 627 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 670
>ref|XM_858449.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 16 (LOC484692), mRNA Length = 3063 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 827 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 870
>ref|XM_858425.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 15 (LOC484692), mRNA Length = 2767 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 531 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 574
>ref|XM_858407.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 14 (LOC484692), mRNA Length = 2705 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 469 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 512
>ref|XM_858391.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 13 (LOC484692), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 824 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 867
>ref|XM_858370.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 12 (LOC484692), mRNA Length = 3048 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 812 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 855
>ref|XM_858341.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 11 (LOC484692), mRNA Length = 3048 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 812 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 855
>ref|XM_858321.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 10 (LOC484692), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 824 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 867
>ref|XM_858302.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 9 (LOC484692), mRNA Length = 2482 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 249 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 292
>ref|XM_858252.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 7 (LOC484692), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 698 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 741
>ref|XM_858236.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 6 (LOC484692), mRNA Length = 2742 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 698 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 741
>ref|XM_541807.2| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 1 (LOC484692), mRNA Length = 1823 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 698 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 741
>ref|XM_858196.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 5 (LOC484692), mRNA Length = 2671 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 627 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 670
>ref|XM_858152.1| PREDICTED: Canis familiaris similar to Forkhead box protein P1, transcript variant 3 (LOC484692), mRNA Length = 2782 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 275 tcagcagcagctccacctgatgcagcggcaccagcagcggcacc 318 |||||||||||||| || |||||||| || ||||||| ||||| Sbjct: 546 tcagcagcagctcctccagatgcagcagctacagcagcagcacc 589
>ref|XM_861275.1| PREDICTED: Canis familiaris similar to HIV-1 Tat interactive protein, 60kDa isoform 3, transcript variant 9 (LOC483728), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 20 ggaagatggcggaggtgggggaga 43
>ref|XM_861222.1| PREDICTED: Canis familiaris similar to HIV-1 Tat interactive protein, 60kDa isoform 3, transcript variant 6 (LOC483728), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 20 ggaagatggcggaggtgggggaga 43
>ref|XM_861204.1| PREDICTED: Canis familiaris similar to HIV-1 Tat interactive protein, 60kDa isoform 3, transcript variant 5 (LOC483728), mRNA Length = 891 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 20 ggaagatggcggaggtgggggaga 43
>ref|XM_861188.1| PREDICTED: Canis familiaris similar to HIV-1 Tat interactive protein, 60kDa isoform 3, transcript variant 4 (LOC483728), mRNA Length = 818 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 20 ggaagatggcggaggtgggggaga 43
>ref|XM_861157.1| PREDICTED: Canis familiaris similar to HIV-1 Tat interactive protein, 60kDa isoform 3, transcript variant 2 (LOC483728), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 23 ggaagatggcggaggtgggggaga 46
>gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome 3, complete sequence Length = 193517 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 acataaccaaatcctcacatgaac 87 ||||| |||||||||||||||||| Sbjct: 134203 acatagccaaatcctcacatgaac 134226
>gb|DQ334063.1| Drosophila miranda CG10990 gene, partial cds Length = 1011 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cagcagcggcaccaccaccg 325 |||||||||||||||||||| Sbjct: 205 cagcagcggcaccaccaccg 186
>gb|BC110675.1| Mus musculus HIV-1 tat interactive protein, homolog (human), mRNA (cDNA clone MGC:117972 IMAGE:4011689), complete cds Length = 2350 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 2 ggaagatggcggaggtgggggaga 25
>gb|AY341842.1| Oryza sativa (japonica cultivar-group) WRKY1 mRNA, complete cds Length = 1414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 1104 cggaccagcagaggcaccac 1085
>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the 3' end of a novel gene (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634), the GOLPH2 gene for golgi phosphoprotein 2 (GP73), a novel pseudogene and a CpG island, complete sequence Length = 160115 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tgcagaataacataaccaaa 74 |||||||||||||||||||| Sbjct: 15710 tgcagaataacataaccaaa 15729
>emb|BX049326.1|CNS09A82 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25AH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 agcggcaccagcagcggcaccaccaccg 325 ||||||| ||||||| |||||||||||| Sbjct: 98 agcggcagcagcagcagcaccaccaccg 125
>emb|BX033989.1|CNS08YE1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 747 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 agcggcaccagcagcggcaccaccaccg 325 ||||||| ||||||| |||||||||||| Sbjct: 86 agcggcagcagcagcagcaccaccaccg 113
>gb|BC093032.1| Homo sapiens HIV-1 Tat interacting protein, 60kDa, transcript variant 3, mRNA (cDNA clone MGC:110937 IMAGE:30335942), complete cds Length = 1857 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 29 ggaagatggcggaggtgggggaga 52
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10 Length = 99967 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 34775 caccagcagcggcaccacca 34756
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 tcgtagggggtggcggcggaggcc 481 |||| ||||||||||||||||||| Sbjct: 217237 tcgtcgggggtggcggcggaggcc 217214
>emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on chromosome 11 Contains the gene for nuclear DNA binding protein C1d and a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, complete sequence Length = 232869 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 223327 caccagcagcggcaccacca 223346 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 223246 caccagcagcggcaccacca 223265
>emb|CR858684.1| Pongo pygmaeus mRNA; cDNA DKFZp468N0313 (from clone DKFZp468N0313) Length = 1846 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 18 ggaagatggcggaggtgggggaga 41
>emb|CR623846.1| full-length cDNA clone CS0DG004YG04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1816 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 26 ggaagatggcggaggtgggggaga 49
>tpg|BK005020.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 17 (WRKY17) gene, complete cds Length = 1805 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 1621 cggaccagcagaggcaccac 1602
>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence Length = 187701 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 cagcggcaccagcagcggcaccaccacc 324 |||| ||||||||||| ||||||||||| Sbjct: 13661 cagcagcaccagcagcagcaccaccacc 13634
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 ggcggcggagacgagctggcgctg 453 |||| ||||||||||||||||||| Sbjct: 2504850 ggcgacggagacgagctggcgctg 2504827
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccagcagcggcaccaccacc 324 |||||||||||||||||||| Sbjct: 2140230 ccagcagcggcaccaccacc 2140211
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 agcagcagctccacctgatg 296 |||||||||||||||||||| Sbjct: 41170 agcagcagctccacctgatg 41189
>ref|NM_136950.2| Drosophila melanogaster CG8818-RA (CG8818), mRNA Length = 1550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 accagcagcggcaccaccac 323 |||||||||||||||||||| Sbjct: 133 accagcagcggcaccaccac 152
>dbj|AK146352.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730060A18 product:HIV-1 tat interactive protein, homolog (human), full insert sequence Length = 1965 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 18 ggaagatggcggaggtgggggaga 41
>gb|AY060613.1| Drosophila melanogaster GH04007 full length cDNA Length = 1559 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 accagcagcggcaccaccac 323 |||||||||||||||||||| Sbjct: 133 accagcagcggcaccaccac 152
>gb|AF432499.1|AF432499 Oryza sativa cellulose synthase-like protein OsCslA9 gene, complete cds Length = 4884 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cagcagcggcaccaccaccg 325 |||||||||||||||||||| Sbjct: 352 cagcagcggcaccaccaccg 333
>ref|NM_182709.1| Homo sapiens HIV-1 Tat interacting protein, 60kDa (HTATIP), transcript variant 3, mRNA Length = 2075 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 246 ggaagatggcggaggtgggggaga 269
>ref|NM_006388.2| Homo sapiens HIV-1 Tat interacting protein, 60kDa (HTATIP), transcript variant 2, mRNA Length = 2229 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 246 ggaagatggcggaggtgggggaga 269
>gb|AF361470.1| Rhizobium leguminosarum bv. trifolii imp gene locus, complete sequence Length = 33154 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 aggactggacgccgccggacttgt 419 |||||||| ||||||||||||||| Sbjct: 22556 aggactggtcgccgccggacttgt 22533
>dbj|AK050974.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030048H11 product:BA555G22.2 (PIBF1 PROTEIN) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 1383 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 taatcaaagagggagaagcc 216 |||||||||||||||||||| Sbjct: 262 taatcaaagagggagaagcc 281
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 19549807 gcaccagcggcggcaccaccaccg 19549830
>gb|AC007356.8|AC007356 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR24H09, complete sequence Length = 189557 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 accagcagcggcaccaccac 323 |||||||||||||||||||| Sbjct: 92205 accagcagcggcaccaccac 92186
>gb|AC092581.2| Homo sapiens BAC clone RP11-16I14 from 4, complete sequence Length = 162075 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 ataacataaccaaatcctcacatg 84 ||||||||| |||||||||||||| Sbjct: 16555 ataacataatcaaatcctcacatg 16578
>emb|BX832953.1|CNS0A0IA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL25ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 255 caccaccaatgaccaccacgaagacggcggag 224
>emb|BX833759.1|CNS0A0HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 617 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 248 caccaccaatgaccaccacgaagacggcggag 217
>emb|BX841742.1|CNS09YLF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 616 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 247 caccaccaatgaccaccacgaagacggcggag 216
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 41677 cggaccagcagaggcaccac 41658
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 134532 cggaccagcagaggcaccac 134513
>gb|AY088631.1| Arabidopsis thaliana clone 8695 mRNA, complete sequence Length = 587 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 342 caccaccaatgaccacctggaagatggcggag 373 ||||||||||||||||| ||||| ||||||| Sbjct: 274 caccaccaatgaccaccacgaagacggcggag 243
>gb|AF481773.1| Frankia sp. ACoN24d putative sigma 70 transcription factor gene, partial cds Length = 555 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gagacgagctggcgctgcag 456 |||||||||||||||||||| Sbjct: 234 gagacgagctggcgctgcag 215
>gb|AF481769.1| Frankia sp. ACN14a primary sigma 70 transcriptional factor (sigA) gene; and unknown gene Length = 2045 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gagacgagctggcgctgcag 456 |||||||||||||||||||| Sbjct: 1480 gagacgagctggcgctgcag 1461
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence Length = 199716 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 taatcaaagagggagaagcc 216 |||||||||||||||||||| Sbjct: 112184 taatcaaagagggagaagcc 112203
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gggggtggcggcggaggcct 482 |||||||||||||||||||| Sbjct: 996589 gggggtggcggcggaggcct 996608
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 ctggcgctgcaggtcgtagg 464 |||||||||||||||||||| Sbjct: 3738362 ctggcgctgcaggtcgtagg 3738381 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 cgcggcacacgaaggtgaagacgc 551 |||||| ||||||||||||||||| Sbjct: 1399454 cgcggcgcacgaaggtgaagacgc 1399431
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cagcagcggcaccaccaccg 325 |||||||||||||||||||| Sbjct: 58840 cagcagcggcaccaccaccg 58821
>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202215 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 agcagcagctccacctgatg 296 |||||||||||||||||||| Sbjct: 101115 agcagcagctccacctgatg 101096
>emb|Z29512.1|ZMLEAMGL3 Z.mays mRNA for group 3 Lea protein MGL3 Length = 1094 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gacgccgccggacttgtcct 422 |||||||||||||||||||| Sbjct: 659 gacgccgccggacttgtcct 640
>dbj|AK110625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B02, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 1082 cggaccagcagaggcaccac 1063
>dbj|AK104635.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D02, full insert sequence Length = 1019 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 164 gcaccagcggcggcaccaccaccg 141
>dbj|AK104172.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B09, full insert sequence Length = 1104 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 237 gcaccagcggcggcaccaccaccg 214
>gb|BC083879.1| Rattus norvegicus HIV-1 tat interactive protein, homolog (human), mRNA (cDNA clone MGC:95167 IMAGE:7130366), complete cds Length = 1975 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 1 ggaagatggcggaggtgggggaga 24
>dbj|AK065418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023J24, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gcaccagcagcggcaccaccaccg 325 |||||||| ||||||||||||||| Sbjct: 238 gcaccagcggcggcaccaccaccg 215
>gb|BC011071.1| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2, mRNA (cDNA clone MGC:18364 IMAGE:3673483), complete cds Length = 2382 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgggggcctcagcagcagct 286 |||||||||||||||||||| Sbjct: 553 tgggggcctcagcagcagct 534
>gb|AY104227.1| Zea mays PCO084365 mRNA sequence Length = 1024 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gacgccgccggacttgtcct 422 |||||||||||||||||||| Sbjct: 571 gacgccgccggacttgtcct 552
>emb|Z73536.1|SCYPL180W S.cerevisiae chromosome XVI reading frame ORF YPL180w Length = 3215 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gaagaagaagatctaatcaa 203 |||||||||||||||||||| Sbjct: 1429 gaagaagaagatctaatcaa 1448
>gb|AE003822.3| Drosophila melanogaster chromosome 2R, section 28 of 73 of the complete sequence Length = 233148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 accagcagcggcaccaccac 323 |||||||||||||||||||| Sbjct: 230216 accagcagcggcaccaccac 230197
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 tgaagaagaagatctaatcaaaga 206 |||||||||| ||||||||||||| Sbjct: 1399994 tgaagaagaaaatctaatcaaaga 1399971
>gb|AC073946.23| Mus musculus strain C57BL/6J chromosome 8 clone rp23-218e4, complete sequence Length = 196558 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cagcggcaccagcagcggcaccaccacc 324 |||| ||||||||||| ||||||||||| Sbjct: 34657 cagcagcaccagcagcagcaccaccacc 34684
>dbj|D26552.1|MZEG3LP Zea mays mRNA for group 3 Lea protein MGL3, complete cds Length = 1094 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gacgccgccggacttgtcct 422 |||||||||||||||||||| Sbjct: 659 gacgccgccggacttgtcct 640
>gb|U20255.1|AHU20255 Aeromonas hydrophila type IV prepilin TapA (tapA) gene, complete cds, pilus biogenesis TapB (tapB) and TapC (tapC) genes, complete cds, and type IV prepilin peptidase/methyltransferase TapD (tapD) gene, complete cds Length = 5489 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagcagcggcaccacca 322 |||||||||||||||||||| Sbjct: 5041 caccagcagcggcaccacca 5022
>gb|AY870605.1| Oryza sativa (japonica cultivar-group) WRKY17 mRNA, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggaccagcagaggcaccac 347 |||||||||||||||||||| Sbjct: 1068 cggaccagcagaggcaccac 1049
>gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, complete sequence Length = 144298 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cagcggcaccagcagcggcaccaccacc 324 |||| ||||||||||| ||||||||||| Sbjct: 141525 cagcagcaccagcagcagcaccaccacc 141552
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gggggtggcggcggaggcct 482 |||||||||||||||||||| Sbjct: 670871 gggggtggcggcggaggcct 670890
>dbj|D28878.1|TTHPOLA Thermus thermophilus polA gene for thermostable DNA polymerase I, complete cds Length = 3221 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gggggtggcggcggaggcct 482 |||||||||||||||||||| Sbjct: 339 gggggtggcggcggaggcct 358
>gb|U74667.1|HSU74667 Human tat interactive protein (TIP60) mRNA, complete cds Length = 2215 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ggaagatggcggagttgggggaga 383 |||||||||||||| ||||||||| Sbjct: 237 ggaagatggcggaggtgggggaga 260
>gb|U05226.1|ZMU05226 Zea mays group 3 Lea protein MGL3 mRNA, complete cds Length = 1094 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gacgccgccggacttgtcct 422 |||||||||||||||||||| Sbjct: 659 gacgccgccggacttgtcct 640 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,535,545 Number of Sequences: 3902068 Number of extensions: 5535545 Number of successful extensions: 116486 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114714 Number of HSP's gapped (non-prelim): 1767 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)