ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466592.1| Oryza sativa (japonica cultivar-group), mRNA 129 1e-26
2dbj|AK111593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
3gb|BT018272.1| Zea mays clone EL01T0203D07.c mRNA sequence 66 2e-07
4gb|AY104058.1| Zea mays PCO060872 mRNA sequence 64 6e-07
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
7dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
8gb|BT009574.1| Triticum aestivum clone wre1n.pk0029.c4:fis, full... 44 0.59
9gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence 44 0.59
10emb|AL772366.7| Mouse DNA sequence from clone RP23-171C7 on chro... 44 0.59
11gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complet... 42 2.3
12gb|AC117398.3| Homo sapiens 3 BAC RP11-715A9 (Roswell Park Cance... 42 2.3
13gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 ... 42 2.3
14emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chr... 42 2.3
15emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chro... 42 2.3
16ref|NM_106123.3| Arabidopsis thaliana DNA binding / transcriptio... 40 9.3
17gb|AY693646.1| Ocimum basilicum alpha-zingiberene synthase (ZIS)... 40 9.3
18gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, co... 40 9.3
19gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p1... 40 9.3
20gb|AY368685.1| Mus musculus sperm-specific sodium proton exchang... 40 9.3
21gb|AC112998.15| Mus musculus chromosome 3, clone RP23-147E7, com... 40 9.3
22emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chr... 40 9.3
23emb|X90387.1|ATCY13GEN A.thaliana DNA for cY13 gene 40 9.3
24gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, compl... 40 9.3
25gb|AF317621.1|AF317621 Lymantria dispar cadherin-related midgut ... 40 9.3
26gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, compl... 40 9.3
27gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, c... 40 9.3
28gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, c... 40 9.3
29emb|BX815387.1|CNS0AEM7 Arabidopsis thaliana Full-length cDNA Co... 40 9.3
30emb|BX817587.1|CNS0AE6D Arabidopsis thaliana Full-length cDNA Co... 40 9.3
31gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map... 40 9.3
32gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M... 40 9.3
33gb|AC084577.1|CBRG39O05 Caenorhabditis briggsae cosmid G39O05, c... 40 9.3
34gb|AC139718.1| Homo sapiens BAC clone RP11-269F21 from 4, comple... 40 9.3
35gb|AC105208.15| Homo sapiens chromosome 17, clone CTD-3226O14, c... 40 9.3
36gb|AC173833.2| Pan troglodytes chromosome X clone CH251-45A9 map... 40 9.3
37gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, c... 40 9.3
38dbj|AK115212.1| Ciona intestinalis cDNA, clone:cieg039k11, full ... 40 9.3
39ref|NM_198106.1| Mus musculus solute carrier family 9, isoform 1... 40 9.3
40emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chro... 40 9.3 
>ref|XM_466592.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3118

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 467  gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttcatcatgcgcc 526
            |||||||||| || || || |||| ||||||||||||||||||| ||||| | | |||||
Sbjct: 2477 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttcttgaagcgcc 2418

                                                                        
Query: 527  tgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtggtg 586
            ||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||| 
Sbjct: 2417 tgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagaggta 2358

                                                                        
Query: 587  cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 646
             ||| |  ||||||||||| ||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct: 2357 gttcgcgaaaccattcatgattcaaggcatcttctgctgatatacgcttctcagggtcat 2298

                                             
Query: 647  acgtcagcattctgtttagcaggtcaaatccag 679
            | ||||| | ||| |||||||| ||||||||||
Sbjct: 2297 atgtcagtaatctatttagcagatcaaatccag 2265



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                         
Query: 129  tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 173
            ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 2786 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 2744
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>dbj|AK111593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093F08, full
            insert sequence
          Length = 3116

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 467  gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttcatcatgcgcc 526
            |||||||||| || || || |||| ||||||||||||||||||| ||||| | | |||||
Sbjct: 2477 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttcttgaagcgcc 2418

                                                                        
Query: 527  tgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtggtg 586
            ||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||| 
Sbjct: 2417 tgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagaggta 2358

                                                                        
Query: 587  cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 646
             ||| |  ||||||||||| ||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct: 2357 gttcgcgaaaccattcatgattcaaggcatcttctgctgatatacgcttctcagggtcat 2298

                                             
Query: 647  acgtcagcattctgtttagcaggtcaaatccag 679
            | ||||| | ||| |||||||| ||||||||||
Sbjct: 2297 atgtcagtaatctatttagcagatcaaatccag 2265



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                         
Query: 129  tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 173
            ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 2786 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 2744
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>gb|BT018272.1| Zea mays clone EL01T0203D07.c mRNA sequence
          Length = 1477

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 587 cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 646
           |||||| |||||| ||||||||||| |||||  | || ||||||||| | ||||||||||
Sbjct: 911 cttcacggaaccactcatggttcaaggcatcagcagcagatatgcgcttctcagggtcat 852

                                            
Query: 647 acgtcagcattctgtttagcaggtcaaatccag 679
           | | |||||  || |||||||||||||| ||||
Sbjct: 851 atgccagcaacctatttagcaggtcaaacccag 819
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>gb|AY104058.1| Zea mays PCO060872 mRNA sequence
          Length = 1566

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgcctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagt 582
           ||||||||  |||||||||||| | | |||||||||||  | ||| |||| | ||| || 
Sbjct: 761 cgcctgtcaagttcattaagagcagggaatgttggcatgaagtcctttgatttaggcaga 702

                                                                       
Query: 583 ggtgcttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcaggg 642
           ||  ||||| |||||||||  || || |  ||||| ||||||||||||||| | ||||||
Sbjct: 701 ggaacttcagagaaccatttgtgcttaagagcatcgtctgctgatatgcgcttatcaggg 642

                               
Query: 643 tcatacgtcagcattctgtt 662
           ||||| ||||||| ||||||
Sbjct: 641 tcataagtcagcagtctgtt 622



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 465 cagttctttcatgcgctgctcctccataggatcagggctcttca 508
           |||||||||||  || ||||| |||| ||||||||| |||||||
Sbjct: 819 cagttctttcaaacgttgctcttccagaggatcaggactcttca 776
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 467      gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 516
                |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 23584688 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 23584639



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                            
Query: 525      cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 584
                ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 23584534 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 23584475

                                                             
Query: 585      tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 629
                |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 23584474 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 23584430



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 637      tcagggtcatacgtcagcattctgtttagcaggtcaaatccag 679
                ||||||||||| ||||| | ||| |||||||| ||||||||||
Sbjct: 23584343 tcagggtcatatgtcagtaatctatttagcagatcaaatccag 23584301



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                             
Query: 129      tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 173
                ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 23584997 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 23584955
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 467    gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 516
              |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 150371 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 150322



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                          
Query: 525    cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 584
              ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 150217 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 150158

                                                           
Query: 585    tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 629
              |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 150157 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 150113



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 637    tcagggtcatacgtcagcattctgtttagcaggtcaaatccag 679
              ||||||||||| ||||| | ||| |||||||| ||||||||||
Sbjct: 150026 tcagggtcatatgtcagtaatctatttagcagatcaaatccag 149984



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                           
Query: 129    tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 173
              ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 150680 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 150638
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>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1669_F01
          Length = 140019

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 467   gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 516
             |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 25788 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 25739



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                         
Query: 525   cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 584
             ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 25634 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 25575

                                                          
Query: 585   tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 629
             |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 25574 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 25530



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 637   tcagggtcatacgtcagcattctgtttagcaggtcaaatccag 679
             ||||||||||| ||||| | ||| |||||||| ||||||||||
Sbjct: 25443 tcagggtcatatgtcagtaatctatttagcagatcaaatccag 25401



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                          
Query: 129   tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 173
             ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 26097 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 26055
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>gb|BT009574.1| Triticum aestivum clone wre1n.pk0029.c4:fis, full insert mRNA
           sequence
          Length = 1180

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 465 cagttctttcatgcgctgctcctccataggatcagggctcttcata 510
           |||||||||||  || |||||||| | ||||||||| |||||||||
Sbjct: 456 cagttctttcaaccgttgctcctctagaggatcaggactcttcata 501
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>gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence
          Length = 89724

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 573   ctgaggaagtggtgcttcacag 594
             ||||||||||||||||||||||
Sbjct: 76449 ctgaggaagtggtgcttcacag 76428
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>emb|AL772366.7| Mouse DNA sequence from clone RP23-171C7 on chromosome 2, complete
              sequence
          Length = 167389

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 520    atgcgcctgtcttgttcattaa 541
              ||||||||||||||||||||||
Sbjct: 105416 atgcgcctgtcttgttcattaa 105395
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>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence
          Length = 152607

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 644   catacgtcagcattctgttta 664
             |||||||||||||||||||||
Sbjct: 63401 catacgtcagcattctgttta 63381
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>gb|AC117398.3| Homo sapiens 3 BAC RP11-715A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109182

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   aggtaagagttcattgtgaccagaa 199
             ||||||||||||| |||||||||||
Sbjct: 78094 aggtaagagttcagtgtgaccagaa 78118
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>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete
             sequence
          Length = 298703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 644   catacgtcagcattctgttta 664
             |||||||||||||||||||||
Sbjct: 65778 catacgtcagcattctgttta 65798
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>emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chromosome 6, complete
             sequence
          Length = 121656

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    atagctgtgaataggccagac 102
             |||||||||||||||||||||
Sbjct: 79353 atagctgtgaataggccagac 79333
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>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete
              sequence
          Length = 221723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    aagtgaaatagtgcctagcat 242
              |||||||||||||||||||||
Sbjct: 108911 aagtgaaatagtgcctagcat 108891
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>ref|NM_106123.3| Arabidopsis thaliana DNA binding / transcription factor AT1G74650
            mRNA, complete cds
          Length = 1517

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   actttatagtactttacata 49
            ||||||||||||||||||||
Sbjct: 1499 actttatagtactttacata 1480
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>gb|AY693646.1| Ocimum basilicum alpha-zingiberene synthase (ZIS) mRNA, complete cds
          Length = 1626

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 316  cagacaccaagaagaaaatg 335
            ||||||||||||||||||||
Sbjct: 1568 cagacaccaagaagaaaatg 1587
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>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence
          Length = 214111

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gctgctcctccataggatca 498
             ||||||||||||||||||||
Sbjct: 91513 gctgctcctccataggatca 91532
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>gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p11.4, complete sequence
          Length = 128427

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   actgaggaagtggtgcttca 591
             ||||||||||||||||||||
Sbjct: 64717 actgaggaagtggtgcttca 64736
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>gb|AY368685.1| Mus musculus sperm-specific sodium proton exchanger mRNA, complete
           cds
          Length = 3867

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 agacaccaagaagaaaatgccctt 340
           ||||||||||||||||| ||||||
Sbjct: 92  agacaccaagaagaaaaggccctt 115
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>gb|AC112998.15| Mus musculus chromosome 3, clone RP23-147E7, complete sequence
          Length = 203273

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tcggtatgtgaaactggtgt 76
             ||||||||||||||||||||
Sbjct: 56584 tcggtatgtgaaactggtgt 56565
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>emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 62109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   tgagatatttgcacaccttacaat 143
             ||||||||||||||||| ||||||
Sbjct: 18826 tgagatatttgcacaccatacaat 18803
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>emb|X90387.1|ATCY13GEN A.thaliana DNA for cY13 gene
          Length = 1547

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   actttatagtactttacata 49
            ||||||||||||||||||||
Sbjct: 1514 actttatagtactttacata 1495
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>gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, complete sequence
          Length = 122012

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   acaccttacaatgcacaggt 151
             ||||||||||||||||||||
Sbjct: 22672 acaccttacaatgcacaggt 22653
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>gb|AF317621.1|AF317621 Lymantria dispar cadherin-related midgut membrane protein mRNA,
           complete cds
          Length = 5484

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 gaagaaaatgcccttcatat 345
           ||||||||||||||||||||
Sbjct: 939 gaagaaaatgcccttcatat 958
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>gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, complete sequence
          Length = 152147

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    acaccttacaatgcacaggt 151
              ||||||||||||||||||||
Sbjct: 138485 acaccttacaatgcacaggt 138466
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>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    tgaccttggaacacatgcac 377
              ||||||||||||||||||||
Sbjct: 148180 tgaccttggaacacatgcac 148161
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>gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, complete sequence
          Length = 166320

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   tgaccttggaacacatgcac 377
             ||||||||||||||||||||
Sbjct: 32929 tgaccttggaacacatgcac 32910
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>emb|BX815387.1|CNS0AEM7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS56ZG08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   actttatagtactttacata 49
            ||||||||||||||||||||
Sbjct: 1542 actttatagtactttacata 1523
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>emb|BX817587.1|CNS0AE6D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZD10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 561

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  actttatagtactttacata 49
           ||||||||||||||||||||
Sbjct: 543 actttatagtactttacata 524
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>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4,
             complete sequence
          Length = 160565

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   actgaggaagtggtgcttca 591
             ||||||||||||||||||||
Sbjct: 11048 actgaggaagtggtgcttca 11067
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>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete
             sequence
          Length = 134402

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    actttatagtactttacata 49
             ||||||||||||||||||||
Sbjct: 99297 actttatagtactttacata 99278
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>gb|AC084577.1|CBRG39O05 Caenorhabditis briggsae cosmid G39O05, complete sequence
          Length = 38027

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 153   gattagattgtgaccaaaagtaaggtaa 180
             ||||||||| |||| |||||||||||||
Sbjct: 35381 gattagattatgactaaaagtaaggtaa 35354
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>gb|AC139718.1| Homo sapiens BAC clone RP11-269F21 from 4, complete sequence
          Length = 127342

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     attgattgttgtttacaagg 24
             ||||||||||||||||||||
Sbjct: 95696 attgattgttgtttacaagg 95715
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>gb|AC105208.15| Homo sapiens chromosome 17, clone CTD-3226O14, complete sequence
          Length = 65233

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   tgaccttggaacacatgcac 377
             ||||||||||||||||||||
Sbjct: 63929 tgaccttggaacacatgcac 63910
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>gb|AC173833.2| Pan troglodytes chromosome X clone CH251-45A9 map human ortholog p11.4,
              complete sequence
          Length = 162519

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 572    actgaggaagtggtgcttca 591
              ||||||||||||||||||||
Sbjct: 124838 actgaggaagtggtgcttca 124857
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>gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, complete sequence
          Length = 187247

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   agacaccaagaagaaaatgccctt 340
             ||||||||||||||||| ||||||
Sbjct: 93659 agacaccaagaagaaaaggccctt 93636
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>dbj|AK115212.1| Ciona intestinalis cDNA, clone:cieg039k11, full insert sequence
          Length = 2084

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   actttatagtactttacata 49
            ||||||||||||||||||||
Sbjct: 1483 actttatagtactttacata 1464
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>ref|NM_198106.1| Mus musculus solute carrier family 9, isoform 10 (Slc9a10), mRNA
          Length = 3867

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 agacaccaagaagaaaatgccctt 340
           ||||||||||||||||| ||||||
Sbjct: 92  agacaccaagaagaaaaggccctt 115
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>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete
             sequence
          Length = 226854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   ccttggaacacatgcacttccaaa 384
             |||||||||||||||| |||||||
Sbjct: 83263 ccttggaacacatgcagttccaaa 83286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,966,709
Number of Sequences: 3902068
Number of extensions: 5966709
Number of successful extensions: 102560
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102438
Number of HSP's gapped (non-prelim): 117
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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