ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase 1362 0.0
2gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence 555 e-155
3gb|AY104014.1| Zea mays PCO103489 mRNA sequence 539 e-150
4ref|XM_479446.1| Oryza sativa (japonica cultivar-group), mRNA 484 e-133
5dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
6dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
7emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene 438 e-119
8gb|AF358766.1| Oryza sativa clone Osl369 xylose isomerase mRNA, ... 216 8e-53
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
10dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
11ref|NM_180872.1| Arabidopsis thaliana xylose isomerase AT5G57655... 76 2e-10
12ref|NM_125147.3| Arabidopsis thaliana xylose isomerase AT5G57655... 76 2e-10
13gb|AY136469.1| Arabidopsis thaliana expressed protein; supported... 76 2e-10
14dbj|AK221134.1| Arabidopsis thaliana mRNA for xylose isomerase, ... 76 2e-10
15gb|BT006607.1| Arabidopsis thaliana At5g57655 mRNA, complete cds 76 2e-10
16emb|BX833713.1|CNS09Z3Y Arabidopsis thaliana Full-length cDNA Co... 76 2e-10
17gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete ... 76 2e-10
18emb|BX834102.1|CNS0A1T5 Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
19gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete ... 72 3e-09
20dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 72 3e-09
21emb|BX831279.1|CNS09ZCJ Arabidopsis thaliana Full-length cDNA Co... 68 4e-08
22gb|AC124959.11| Medicago truncatula clone mth2-23l11, complete s... 48 0.040
23gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se... 48 0.040
24gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, com... 42 2.5
25gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete se... 42 2.5
26gb|AF027207.2|AF027207 Homo sapiens chromosome 21 clone cosmid D... 42 2.5
27dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.5
28emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 42 2.5
29emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 42 2.5
30gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome... 40 9.8
31gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, com... 40 9.8
32gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome ... 40 9.8
33gb|BC041267.1| Xenopus laevis actin related protein 2/3 complex,... 40 9.8
34ref|XM_784544.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.8
35emb|CR936947.2| Medicago truncatula chromosome 5 clone mte1-85h1... 40 9.8
36emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on ch... 40 9.8
37gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Canc... 40 9.8
38dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, c... 40 9.8
39gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.8
40gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswel... 40 9.8
41dbj|AB224978.1| Aspergillus oryzae cDNA, contig sequence: AoEST1829 40 9.8
42dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 9.8
43dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 9.8
44gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell P... 40 9.8
45gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, comple... 40 9.8
46gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-12... 40 9.8
47gb|AC145068.8| Mus musculus chromosome 8, clone RP23-197G5, comp... 40 9.8
48gb|AC007034.4|AC007034 Homo sapiens BAC clone RP11-99M1 from Y, ... 40 9.8
49gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Sys... 40 9.8
50emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o1... 40 9.8
51gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48... 40 9.8
52gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, co... 40 9.8
53emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chr... 40 9.8 
>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase
          Length = 1710

 Score = 1362 bits (687), Expect = 0.0
 Identities = 708/715 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 1645

                                                                        
Query: 62   gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagcga 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1644 gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagtga 1585

                                                                        
Query: 122  cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 1525

                                                                        
Query: 182  cgccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaac 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 cgccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaac 1465

                                                                        
Query: 242  ggttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagc 301
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1464 ggttggctcgccccactccaaggccttcttttctagcgtttcaaagtcgcccttcccagc 1405

                                                                        
Query: 302  ctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtc 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 ctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtc 1345

                                                                        
Query: 362  cagggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccat 421
            ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1344 cagggaaccatcctcaatcagcttgacaacattgcggcggccgcgggccatggtgtccat 1285

                                                                        
Query: 422  cccagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggc 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 cccagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggc 1225

                                                                        
Query: 482  atcaaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaa 541
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 gtaaaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaa 1165

                                                                        
Query: 542  ggtagcttctgaaatgtctgtaaggaactcatccgtgtcccaaccaacttgtggatcacc 601
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1164 ggtagcttctgaaatgtctgtaaggaactcatccgtgtcccaaccaacctgtggatcacc 1105

                                                                        
Query: 602  agtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatg 661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 agtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatg 1045

                                                                   
Query: 662  gcagctatgtccagagagagtagcatggttgcactcaacatttatcttgaattcc 716
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 gcagctatgtccagagagagtagcatggttgcactcaacatttatcttgaattcc 990
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>gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence
          Length = 1548

 Score =  555 bits (280), Expect = e-155
 Identities = 454/512 (88%)
 Strand = Plus / Minus

                                                                        
Query: 201  tggaacagcatctcagccaattcctgtttgcccgatggaacggttggctcgccccactcc 260
            |||||||| ||||| |||| |||||||||||| |||| ||| || ||||| |||||||| 
Sbjct: 1260 tggaacagaatctccgccagttcctgtttgccggatgcaacagtgggctcaccccactct 1201

                                                                        
Query: 261  aagaccttcttttctagcgtttcaaagtcgcccttcccagcctcgatcatggcaccaatc 320
            |  ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||
Sbjct: 1200 agaaccttcttttctagcgtctcaaagtctcctttcccagcctcgatcaaggcaccaatc 1141

                                                                        
Query: 321  tcagtgtcaaagctctggtagcgtttgcgtacaagctcgtccagggaaccatcctcaatc 380
            ||| | |||||||||||||| || ||||| ||||| || || ||||||||||||||||||
Sbjct: 1140 tcactatcaaagctctggtaccgcttgcggacaagatcatctagggaaccatcctcaatc 1081

                                                                        
Query: 381  agcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatatgggcaata 440
            ||||||||||| || || ||||| || |||| ||||||||| || ||||||||||||| |
Sbjct: 1080 agcttggcaacgttacgaaggccacgtgccagggtgtccattccggagatatgggcaaga 1021

                                                                        
Query: 441  aacaggtcctcaacatcagtactctccctccgcaatttggcatcaaagttgaagccacca 500
            |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1020 aacatgtcctcaacatcagtactttccctccgcaatttggcatcaaagttgaaaccacca 961

                                                                        
Query: 501  ggcgcaagtccatcattcttaactacacttgacataatcaaggtagcttctgaaatgtct 560
            || ||||||||| |||||||||||||||||||||||| ||| ||||| |||| |||||||
Sbjct: 960  ggtgcaagtccaccattcttaactacacttgacataaccaaagtagcctctgcaatgtct 901

                                                                        
Query: 561  gtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatgttt 620
            || | ||||| ||| ||||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 900  gtcatgaactgatctgtgtcccaaccaacttgaggatcaccagtgtttgcatcgatattt 841

                                                                        
Query: 621  ccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagagaga 680
            ||||||| | ||||||| ||||||||||| |  || ||||||||||| |||||||| |||
Sbjct: 840  ccaagaaggccattaatccgtgcagtctccaattcatgatggcagctgtgtccagataga 781

                                            
Query: 681  gtagcatggttgcactcaacatttatcttgaa 712
            ||||||||||||||||||||||| ||||||||
Sbjct: 780  gtagcatggttgcactcaacattaatcttgaa 749
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>gb|AY104014.1| Zea mays PCO103489 mRNA sequence
          Length = 2135

 Score =  539 bits (272), Expect = e-150
 Identities = 452/512 (88%)
 Strand = Plus / Minus

                                                                        
Query: 201  tggaacagcatctcagccaattcctgtttgcccgatggaacggttggctcgccccactcc 260
            |||||||| ||||| |||| |||||||||||| |||| ||| || ||||| |||||||| 
Sbjct: 1838 tggaacagaatctccgccagttcctgtttgccggatgcaacagtgggctcaccccactct 1779

                                                                        
Query: 261  aagaccttcttttctagcgtttcaaagtcgcccttcccagcctcgatcatggcaccaatc 320
            |  ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||
Sbjct: 1778 agaaccttcttttctagcgtctcaaagtctcctttcccagcctcgatcaaggcaccaatc 1719

                                                                        
Query: 321  tcagtgtcaaagctctggtagcgtttgcgtacaagctcgtccagggaaccatcctcaatc 380
            ||| | |||||||||||||| || ||||| ||||| || || |||||||||||| |||||
Sbjct: 1718 tcactatcaaagctctggtaccgcttgcggacaagatcatctagggaaccatccccaatc 1659

                                                                        
Query: 381  agcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatatgggcaata 440
            ||||||||||| || |||||||| || |||| ||||||||| || ||||||||||||| |
Sbjct: 1658 agcttggcaacgttacggaggccacgtgccagggtgtccattccggagatatgggcaaga 1599

                                                                        
Query: 441  aacaggtcctcaacatcagtactctccctccgcaatttggcatcaaagttgaagccacca 500
            |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1598 aacatgtcctcaacatcagtactttccctccgcaatttggcatcaaagttgaaaccacca 1539

                                                                        
Query: 501  ggcgcaagtccatcattcttaactacacttgacataatcaaggtagcttctgaaatgtct 560
            || ||||||||| |||||||||||||||||||||||| ||| ||||| |||| |||||||
Sbjct: 1538 ggtgcaagtccaccattcttaactacacttgacataaccaaagtagcctctgcaatgtct 1479

                                                                        
Query: 561  gtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatgttt 620
            || | ||||| ||| ||||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 1478 gtcatgaactgatctgtgtcccaaccaacttgaggatcaccagtgtttgcatcgatattt 1419

                                                                        
Query: 621  ccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagagaga 680
            ||||| |   ||||||| ||||||||||| |  || ||||||||||| |||||||| |||
Sbjct: 1418 ccaagcagcccattaatccgtgcagtctccaattcatgatggcagctgtgtccagataga 1359

                                            
Query: 681  gtagcatggttgcactcaacatttatcttgaa 712
            ||||||||||||||||||||||| ||||||||
Sbjct: 1358 gtagcatggttgcactcaacattaatcttgaa 1327
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>ref|XM_479446.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1760

 Score =  484 bits (244), Expect = e-133
 Identities = 460/532 (86%)
 Strand = Plus / Minus

                                                                        
Query: 184  ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 243
            ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 1550 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 1491

                                                                        
Query: 244  ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 303
            | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 1490 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 1431

                                                                        
Query: 304  cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 363
            | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 1430 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 1371

                                                                        
Query: 364  gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 423
            ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 1370 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 1311

                                                                        
Query: 424  cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 483
            | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1310 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 1251

                                                                        
Query: 484  caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 543
            |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 1250 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 1191

                                                                        
Query: 544  tagcttctgaaatgtctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccag 603
            |||| |||||||| ||||||||||||| ||| ||||||||||| |  || ||||||||||
Sbjct: 1190 tagcctctgaaatatctgtaaggaactgatcggtgtcccaaccgatctggggatcaccag 1131

                                                                        
Query: 604  tgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggc 663
            |||| |||||||| || ||||| |   ||||||| | ||||||||||||||| || ||||
Sbjct: 1130 tgttggcatcaatattcccaagcagaccattaattcttgcagtctcaagctcatggtggc 1071

                                                                
Query: 664  agctatgtccagagagagtagcatggttgcactcaacatttatcttgaattc 715
            ||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1070 agctatgtccagatagagtagcgtggttgcattcaacatttatcttgaattc 1019
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>dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F02, full
           insert sequence
          Length = 1177

 Score =  484 bits (244), Expect = e-133
 Identities = 460/532 (86%)
 Strand = Plus / Minus

                                                                       
Query: 184 ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 243
           ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 960 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 901

                                                                       
Query: 244 ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 303
           | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 900 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 841

                                                                       
Query: 304 cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 363
           | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 840 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 781

                                                                       
Query: 364 gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 423
           ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 780 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 721

                                                                       
Query: 424 cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 483
           | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 720 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 661

                                                                       
Query: 484 caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 543
           |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 660 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 601

                                                                       
Query: 544 tagcttctgaaatgtctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccag 603
           |||| |||||||| ||||||||||||| ||| ||||||||||| |  || ||||||||||
Sbjct: 600 tagcctctgaaatatctgtaaggaactgatcggtgtcccaaccgatctggggatcaccag 541

                                                                       
Query: 604 tgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggc 663
           |||| |||||||| || ||||| |   ||||||| | ||||||||||||||| || ||||
Sbjct: 540 tgttggcatcaatattcccaagcagaccattaattcttgcagtctcaagctcatggtggc 481

                                                               
Query: 664 agctatgtccagagagagtagcatggttgcactcaacatttatcttgaattc 715
           ||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 480 agctatgtccagatagagtagcgtggttgcattcaacatttatcttgaattc 429
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>dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E09, full
            insert sequence
          Length = 1760

 Score =  484 bits (244), Expect = e-133
 Identities = 460/532 (86%)
 Strand = Plus / Minus

                                                                        
Query: 184  ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 243
            ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 1550 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 1491

                                                                        
Query: 244  ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 303
            | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 1490 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 1431

                                                                        
Query: 304  cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 363
            | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 1430 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 1371

                                                                        
Query: 364  gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 423
            ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 1370 gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 1311

                                                                        
Query: 424  cagagatatgggcaataaacaggtcctcaacatcagtactctccctccgcaatttggcat 483
            | || ||||| || | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1310 ccgatatatgagccagaaacatgtcctcaacatcagtactctccctcctcaatttggcat 1251

                                                                        
Query: 484  caaagttgaagccaccaggcgcaagtccatcattcttaactacacttgacataatcaagg 543
            |||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||| |
Sbjct: 1250 caaagttgaatccaccaggtgcaagcccaccattcttaaccacacttgacataaccaaag 1191

                                                                        
Query: 544  tagcttctgaaatgtctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccag 603
            |||| |||||||| ||||||||||||| ||| ||||||||||| |  || ||||||||||
Sbjct: 1190 tagcctctgaaatatctgtaaggaactgatcggtgtcccaaccgatctggggatcaccag 1131

                                                                        
Query: 604  tgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggc 663
            |||| |||||||| || ||||| |   ||||||| | ||||||||||||||| || ||||
Sbjct: 1130 tgttggcatcaatattcccaagcagaccattaattcttgcagtctcaagctcatggtggc 1071

                                                                
Query: 664  agctatgtccagagagagtagcatggttgcactcaacatttatcttgaattc 715
            ||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1070 agctatgtccagatagagtagcgtggttgcattcaacatttatcttgaattc 1019
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>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score =  438 bits (221), Expect = e-119
 Identities = 224/225 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 aattccgtgttgaagaacgagtttaattttgatataaggttacattattttcagctccac 4408

                                                                        
Query: 62   gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagcga 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4407 gcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgcctgtagtga 4348

                                                                        
Query: 122  cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 cgaggacggctgggcgttccaaggtcgcgctcttgcttttttattcctagaaccgtgggc 4288

                                                         
Query: 182  cgccatctacagagcggattggaacagcatctcagccaattcctg 226
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 cgccatctacagagcggattggaacagcatctcagccaattcctg 4243



 Score =  184 bits (93), Expect = 3e-43
 Identities = 99/101 (98%)
 Strand = Plus / Minus

                                                                        
Query: 373  cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 432
            |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3818 cctcaatcagcttgacaacattgcggcggccgcgggccatggtgtccatcccagagatat 3759

                                                     
Query: 433  gggcaataaacaggtcctcaacatcagtactctccctccgc 473
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 gggcaataaacaggtcctcaacatcagtactctccctccgc 3718



 Score =  159 bits (80), Expect = 2e-35
 Identities = 83/84 (98%)
 Strand = Plus / Minus

                                                                        
Query: 584  accaacttgtggatcaccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgc 643
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 accaacctgtggatcaccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgc 3242

                                    
Query: 644  agtctcaagctcgtgatggcagct 667
            ||||||||||||||||||||||||
Sbjct: 3241 agtctcaagctcgtgatggcagct 3218



 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                        
Query: 223  cctgtttgcccgatggaacggttggctcgccccactccaagaccttcttttctagcgttt 282
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4135 cctgtttgcccgatggaacggttggctcgccccactccaaggccttcttttctagcgttt 4076

                                 
Query: 283  caaagtcgcccttcccagcct 303
            |||||||||||||||||||||
Sbjct: 4075 caaagtcgcccttcccagcct 4055



 Score =  149 bits (75), Expect = 1e-32
 Identities = 75/75 (100%)
 Strand = Plus / Minus

                                                                        
Query: 301  cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3976 cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 3917

                           
Query: 361  ccagggaaccatcct 375
            |||||||||||||||
Sbjct: 3916 ccagggaaccatcct 3902



 Score =  145 bits (73), Expect = 2e-31
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                        
Query: 514  cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3462 cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 3403

                         
Query: 574  ccgtgtcccaacc 586
            |||||||||||||
Sbjct: 3402 ccgtgtcccaacc 3390



 Score =  101 bits (51), Expect = 3e-18
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                               
Query: 666  ctatgtccagagagagtagcatggttgcactcaacatttatcttgaattcc 716
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3133 ctatgtccagagagagtagcatggttgcactcaacatttatcttgaattcc 3083



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 473  caatttggcatcaaagttgaagccaccaggcgcaagtccatc 514
            ||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 3629 caatttggcgtaaaagttgaagccaccaggcgcaagtccatc 3588
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>gb|AF358766.1| Oryza sativa clone Osl369 xylose isomerase mRNA, partial cds
          Length = 415

 Score =  216 bits (109), Expect = 8e-53
 Identities = 235/277 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 ccatctacagagcggattggaacagcatctcagccaattcctgtttgcccgatggaacgg 243
           ||||||| ||||| | ||||||||| |||||||||| |||||| ||||| ||||||||  
Sbjct: 277 ccatctatagagcagcttggaacagaatctcagccagttcctgcttgccagatggaacaa 218

                                                                       
Query: 244 ttggctcgccccactccaagaccttcttttctagcgtttcaaagtcgcccttcccagcct 303
           | || || ||||||||||  |||||||| ||||| || || ||||| || ||||||||||
Sbjct: 217 tgggttcaccccactccagaaccttcttctctagtgtctcgaagtctcctttcccagcct 158

                                                                       
Query: 304 cgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgtcca 363
           | |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 157 caatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcatcca 98

                                                                       
Query: 364 gggaaccatcctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcc 423
           ||||||||||||| ||||||||| ||||||| || ||||||||||| | ||||||||| |
Sbjct: 97  gggaaccatcctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattc 38

                                                
Query: 424 cagagatatgggcaataaacaggtcctcaacatcagt 460
           | || ||||| || | ||||| |||||||||||||||
Sbjct: 37  ccgatatatgagccagaaacatgtcctcaacatcagt 1
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                            
Query: 373      cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 432
                |||| ||||||||| ||||||| || ||||||||||| | ||||||||| || || ||||
Sbjct: 28219467 cctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattcccgatatat 28219526

                                                       
Query: 433      gggcaataaacaggtcctcaacatcagtactctccctcc 471
                | || | ||||| ||||||||||||||||||||||||||
Sbjct: 28219527 gagccagaaacatgtcctcaacatcagtactctccctcc 28219565



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 514      cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 573
                |||||||||| ||||||||||||| ||| ||||| |||||||| ||||||||||||| ||
Sbjct: 28219801 cattcttaaccacacttgacataaccaaagtagcctctgaaatatctgtaaggaactgat 28219860

                             
Query: 574      ccgtgtcccaacc 586
                | |||||||||||
Sbjct: 28219861 cggtgtcccaacc 28219873



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 301      cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 360
                |||| |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| |
Sbjct: 28219317 cctcaatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcat 28219376

                               
Query: 361      ccagggaaccatcct 375
                |||||||||||||||
Sbjct: 28219377 ccagggaaccatcct 28219391



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 666      ctatgtccagagagagtagcatggttgcactcaacatttatcttgaattc 715
                ||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 28220143 ctatgtccagatagagtagcgtggttgcattcaacatttatcttgaattc 28220192



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 594      ggatcaccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagc 653
                |||||||||||||| |||||||| || ||||| |   ||||||| | |||||||||||||
Sbjct: 28219995 ggatcaccagtgttggcatcaatattcccaagcagaccattaattcttgcagtctcaagc 28220054

                              
Query: 654      tcgtgatggcagct 667
                || || ||||||||
Sbjct: 28220055 tcatggtggcagct 28220068



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 473      caatttggcatcaaagttgaagccaccaggcgcaag 508
                ||||||||||||||||||||| |||||||| |||||
Sbjct: 28219667 caatttggcatcaaagttgaatccaccaggtgcaag 28219702
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>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                         
Query: 373   cctcaatcagcttggcaacattgcggaggccgcgggccatggtgtccatcccagagatat 432
             |||| ||||||||| ||||||| || ||||||||||| | ||||||||| || || ||||
Sbjct: 75012 cctcgatcagcttgacaacattccgaaggccgcgggctagggtgtccattcccgatatat 75071

                                                    
Query: 433   gggcaataaacaggtcctcaacatcagtactctccctcc 471
             | || | ||||| ||||||||||||||||||||||||||
Sbjct: 75072 gagccagaaacatgtcctcaacatcagtactctccctcc 75110



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 514   cattcttaactacacttgacataatcaaggtagcttctgaaatgtctgtaaggaactcat 573
             |||||||||| ||||||||||||| ||| ||||| |||||||| ||||||||||||| ||
Sbjct: 75346 cattcttaaccacacttgacataaccaaagtagcctctgaaatatctgtaaggaactgat 75405

                          
Query: 574   ccgtgtcccaacc 586
             | |||||||||||
Sbjct: 75406 cggtgtcccaacc 75418



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 301   cctcgatcatggcaccaatctcagtgtcaaagctctggtagcgtttgcgtacaagctcgt 360
             |||| |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||| |
Sbjct: 74862 cctcaatcaaggcaccgatctcactatcaaaactctggtagcgcttgcgaacaagctcat 74921

                            
Query: 361   ccagggaaccatcct 375
             |||||||||||||||
Sbjct: 74922 ccagggaaccatcct 74936



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 666   ctatgtccagagagagtagcatggttgcactcaacatttatcttgaattc 715
             ||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 75688 ctatgtccagatagagtagcgtggttgcattcaacatttatcttgaattc 75737



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 594   ggatcaccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagc 653
             |||||||||||||| |||||||| || ||||| |   ||||||| | |||||||||||||
Sbjct: 75540 ggatcaccagtgttggcatcaatattcccaagcagaccattaattcttgcagtctcaagc 75599

                           
Query: 654   tcgtgatggcagct 667
             || || ||||||||
Sbjct: 75600 tcatggtggcagct 75613



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 473   caatttggcatcaaagttgaagccaccaggcgcaag 508
             ||||||||||||||||||||| |||||||| |||||
Sbjct: 75212 caatttggcatcaaagttgaatccaccaggtgcaag 75247
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>ref|NM_180872.1| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant
            AT5G57655.1 mRNA, complete cds
          Length = 1863

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 1295 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 1236

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1235 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 1176

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 1175 agcgtggcatggttacactcaa 1154
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>ref|NM_125147.3| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant
            AT5G57655.2 mRNA, complete cds
          Length = 1902

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 1333 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 1274

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1273 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 1214

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 1213 agcgtggcatggttacactcaa 1192
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>gb|AY136469.1| Arabidopsis thaliana expressed protein; supported by full length
            cDNA: Ceres: 122798 (At5g57655) mRNA, complete cds
          Length = 1823

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 1331 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 1272

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1271 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 1212

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 1211 agcgtggcatggttacactcaa 1190
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>dbj|AK221134.1| Arabidopsis thaliana mRNA for xylose isomerase, partial cds, clone:
           RAFL22-92-O10
          Length = 886

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                       
Query: 558 tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
           |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 333 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 274

                                                                       
Query: 618 tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
           || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 273 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 214

                                 
Query: 678 agagtagcatggttgcactcaa 699
           || || |||||||| |||||||
Sbjct: 213 agcgtggcatggttacactcaa 192
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>gb|BT006607.1| Arabidopsis thaliana At5g57655 mRNA, complete cds
          Length = 1434

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 1064 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 1005

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1004 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 945

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 944  agcgtggcatggttacactcaa 923
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>emb|BX833713.1|CNS09Z3Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL72ZD05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 966

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                       
Query: 558 tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
           |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 469 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 410

                                                                       
Query: 618 tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
           || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 409 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 350

                                 
Query: 678 agagtagcatggttgcactcaa 699
           || || |||||||| |||||||
Sbjct: 349 agcgtggcatggttacactcaa 328
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>gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete sequence
          Length = 1838

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||||||||||||||||
Sbjct: 1295 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtgtttgcatcaatg 1236

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1235 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 1176

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 1175 agcgtggcatggttacactcaa 1154
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>emb|BX834102.1|CNS0A1T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL9ZA09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1087

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 600 ccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtga 659
           |||||||||||||||||||| ||||| |   ||||||| | |||||| ||||||||||||
Sbjct: 565 ccagtgtttgcatcaatgttgccaagtaaaccattaattcttgcagtttcaagctcgtga 506

                                                   
Query: 660 tggcagctatgtccagagagagtagcatggttgcactcaa 699
           || ||  | || |||||||| || |||||||| |||||||
Sbjct: 505 tgacaagtgtgaccagagagcgtggcatggttacactcaa 466
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>gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete sequence
          Length = 1649

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 600  ccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtga 659
            |||||||||||||||||||| ||||| |   ||||||| | |||||| ||||||||||||
Sbjct: 1039 ccagtgtttgcatcaatgttgccaagtaaaccattaattcttgcagtttcaagctcgtga 980

                                                    
Query: 660  tggcagctatgtccagagagagtagcatggttgcactcaa 699
            || ||  | || |||||||| || |||||||| |||||||
Sbjct: 979  tgacaagtgtgaccagagagcgtggcatggttacactcaa 940
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>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                         
Query: 600   ccagtgtttgcatcaatgtttccaagaatgtcattaatgcgtgcagtctcaagctcgtga 659
             |||||||||||||||||||| ||||| |   ||||||| | |||||| ||||||||||||
Sbjct: 79896 ccagtgtttgcatcaatgttgccaagtaaaccattaattcttgcagtttcaagctcgtga 79837

                                                     
Query: 660   tggcagctatgtccagagagagtagcatggttgcactcaa 699
             || ||  | || |||||||| || |||||||| |||||||
Sbjct: 79836 tgacaagtgtgaccagagagcgtggcatggttacactcaa 79797
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>emb|BX831279.1|CNS09ZCJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS74ZE05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1649

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 115/142 (80%)
 Strand = Plus / Minus

                                                                        
Query: 558  tctgtaaggaactcatccgtgtcccaaccaacttgtggatcaccagtgtttgcatcaatg 617
            |||||||| |||| ||| || ||||| |||  ||| | ||| ||||| ||||||||||||
Sbjct: 1152 tctgtaagaaactgatctgtatcccatccagtttgagcatcgccagtatttgcatcaatg 1093

                                                                        
Query: 618  tttccaagaatgtcattaatgcgtgcagtctcaagctcgtgatggcagctatgtccagag 677
            || ||||| |   ||||||| | |||||| |||||||||||||| ||  | || ||||||
Sbjct: 1092 ttgccaagtaaaccattaattcttgcagtttcaagctcgtgatgacaagtgtgaccagag 1033

                                  
Query: 678  agagtagcatggttgcactcaa 699
            || || |||||||| |||||||
Sbjct: 1032 agcgtggcatggttacactcaa 1011
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>gb|AC124959.11| Medicago truncatula clone mth2-23l11, complete sequence
          Length = 125883

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 607   ttgcatcaatgtttccaagaatgt 630
             ||||||||||||||||||||||||
Sbjct: 85952 ttgcatcaatgtttccaagaatgt 85975



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 607   ttgcatcaatgtttccaagaatgt 630
             ||||| ||||||||||||||||||
Sbjct: 65866 ttgcaacaatgtttccaagaatgt 65889
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>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 473   caatttggcatcaaagttgaagccaccaggcgcaagtcca 512
             ||||||||||||||||||||| ||||| || |||| ||||
Sbjct: 85708 caatttggcatcaaagttgaatccacctggtgcaattcca 85747



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 584   accaacttgtggatcaccagtgtttgcatc 613
             ||||||||| ||||||||||| ||||||||
Sbjct: 86055 accaacttgaggatcaccagtatttgcatc 86084



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 672   ccagagagagtagcatggttgcactcaa 699
             ||||| ||||| ||||||||||||||||
Sbjct: 86251 ccagatagagtggcatggttgcactcaa 86278
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>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence
          Length = 154199

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 308   catggcaccaatctcagtgtcaaag 332
             |||||||||| ||||||||||||||
Sbjct: 84035 catggcaccagtctcagtgtcaaag 84011
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>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence
          Length = 118017

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    aacgagtttaattttgatata 37
             |||||||||||||||||||||
Sbjct: 91024 aacgagtttaattttgatata 91004
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>gb|AF027207.2|AF027207 Homo sapiens chromosome 21 clone cosmid D13C2 map 21q22.2, complete
             sequence
          Length = 37773

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 540   aaggtagcttctgaaatgtct 560
             |||||||||||||||||||||
Sbjct: 24914 aaggtagcttctgaaatgtct 24934
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 356     ctcgtccagggaaccatcctc 376
               |||||||||||||||||||||
Sbjct: 1075951 ctcgtccagggaaccatcctc 1075931
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>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 540    aaggtagcttctgaaatgtct 560
              |||||||||||||||||||||
Sbjct: 323737 aaggtagcttctgaaatgtct 323717
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>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 540    aaggtagcttctgaaatgtct 560
              |||||||||||||||||||||
Sbjct: 214340 aaggtagcttctgaaatgtct 214360
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>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 695   ctcaacatttatcttgaatt 714
             ||||||||||||||||||||
Sbjct: 44800 ctcaacatttatcttgaatt 44781
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>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence
          Length = 174522

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 538    tcaaggtagcttctgaaatg 557
              ||||||||||||||||||||
Sbjct: 155564 tcaaggtagcttctgaaatg 155545
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>gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome 8, complete sequence
          Length = 257765

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttctgaaatgtctgtaagga 567
             ||||||||||||||||||||
Sbjct: 47806 ttctgaaatgtctgtaagga 47825
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>gb|BC041267.1| Xenopus laevis actin related protein 2/3 complex, subunit 1A, 41kDa,
            mRNA (cDNA clone MGC:52839 IMAGE:4885217), complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   ttacattattttcagctcca 60
            ||||||||||||||||||||
Sbjct: 1510 ttacattattttcagctcca 1529
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>ref|XM_784544.1| PREDICTED: Strongylocentrotus purpuratus similar to
            Retrovirus-related Pol polyprotein from transposon 297
            (LOC584692), partial mRNA
          Length = 1789

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   ttattttcagctccacgcag 65
            ||||||||||||||||||||
Sbjct: 1373 ttattttcagctccacgcag 1354
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>emb|CR936947.2| Medicago truncatula chromosome 5 clone mte1-85h10, COMPLETE SEQUENCE
          Length = 136310

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     gaagaacgagtttaattttgatat 36
              |||||| |||||||||||||||||
Sbjct: 131309 gaagaatgagtttaattttgatat 131332
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>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete
             sequence
          Length = 222359

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   tcaccagtgtttgcatcaat 616
             ||||||||||||||||||||
Sbjct: 56506 tcaccagtgtttgcatcaat 56525
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>gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51070

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gctcttgcttttttattcct 169
             ||||||||||||||||||||
Sbjct: 21516 gctcttgcttttttattcct 21535
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>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence
          Length = 188847

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   tcaaggtagcttctgaaatg 557
             ||||||||||||||||||||
Sbjct: 88380 tcaaggtagcttctgaaatg 88399
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 538      tcaaggtagcttctgaaatg 557
                ||||||||||||||||||||
Sbjct: 16981652 tcaaggtagcttctgaaatg 16981633
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>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 167638

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   cagagatatgggcaataaac 443
             ||||||||||||||||||||
Sbjct: 48685 cagagatatgggcaataaac 48666
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>dbj|AB224978.1| Aspergillus oryzae cDNA, contig sequence: AoEST1829
          Length = 605

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 596 atcaccagtgtttgcatcaa 615
           ||||||||||||||||||||
Sbjct: 516 atcaccagtgtttgcatcaa 535
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tgtccatcccagagatatgg 434
              ||||||||||||||||||||
Sbjct: 427085 tgtccatcccagagatatgg 427066
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 596     atcaccagtgtttgcatcaa 615
               ||||||||||||||||||||
Sbjct: 2014248 atcaccagtgtttgcatcaa 2014267
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>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 191134

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 690    ttgcactcaacatttatctt 709
              ||||||||||||||||||||
Sbjct: 122482 ttgcactcaacatttatctt 122463
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>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence
          Length = 159969

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gctcttgcttttttattcct 169
              ||||||||||||||||||||
Sbjct: 112812 gctcttgcttttttattcct 112831
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>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence
          Length = 169313

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   gccatggtgtccatcccaga 427
             ||||||||||||||||||||
Sbjct: 54457 gccatggtgtccatcccaga 54476
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>gb|AC145068.8| Mus musculus chromosome 8, clone RP23-197G5, complete sequence
          Length = 195178

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 684    gcatggttgcactcaacatt 703
              ||||||||||||||||||||
Sbjct: 190819 gcatggttgcactcaacatt 190800
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>gb|AC007034.4|AC007034 Homo sapiens BAC clone RP11-99M1 from Y, complete sequence
          Length = 149198

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    tcaaggtagcttctgaaatg 557
              ||||||||||||||||||||
Sbjct: 133092 tcaaggtagcttctgaaatg 133111
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>gb|AC006584.12|AC006584 Mus musculus  BAC GSMB-407A4 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 160288

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 695   ctcaacatttatcttgaatt 714
             ||||||||||||||||||||
Sbjct: 57877 ctcaacatttatcttgaatt 57896
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>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    gaagaacgagtttaattttgatat 36
             |||||| |||||||||||||||||
Sbjct: 98805 gaagaatgagtttaattttgatat 98782
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>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete
              sequence
          Length = 282116

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    cagagatatgggcaataaac 443
              ||||||||||||||||||||
Sbjct: 244397 cagagatatgggcaataaac 244378
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>gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, complete sequence
          Length = 212270

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 684   gcatggttgcactcaacatt 703
             ||||||||||||||||||||
Sbjct: 40654 gcatggttgcactcaacatt 40635
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>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete
             sequence
          Length = 126095

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   cagccaattcctgtttgccc 233
             ||||||||||||||||||||
Sbjct: 43989 cagccaattcctgtttgccc 44008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,685,849
Number of Sequences: 3902068
Number of extensions: 5685849
Number of successful extensions: 114387
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114130
Number of HSP's gapped (non-prelim): 257
length of query: 716
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 693
effective length of database: 17,143,297,704
effective search space: 11880305308872
effective search space used: 11880305308872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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