Clone Name | rbags9i18 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_470257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 2115 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 2063
>gb|BT018844.1| Zea mays clone EL01N0554B10.d mRNA sequence Length = 2441 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 535 tgctgtttgggccacctttgccgcgtagg 563 ||||| ||||||||||||||||||||||| Sbjct: 1961 tgctgcttgggccacctttgccgcgtagg 1933
>gb|BT016816.1| Zea mays clone Contig649 mRNA sequence Length = 1830 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 535 tgctgtttgggccacctttgccgcgtagg 563 ||||| ||||||||||||||||||||||| Sbjct: 1317 tgctgcttgggccacctttgccgcgtagg 1289
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 3108402 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 3108454 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aggggcggctttctctgccg 605 |||||||||||||||||||| Sbjct: 8815955 aggggcggctttctctgccg 8815974
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 31415 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 31467
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 3108513 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 3108565 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aggggcggctttctctgccg 605 |||||||||||||||||||| Sbjct: 8813790 aggggcggctttctctgccg 8813809
>dbj|AK119641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F09, full insert sequence Length = 2166 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 1763 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 1711
>dbj|AK111578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075E22, full insert sequence Length = 2862 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 2352 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 2300
>dbj|AK111489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A14, full insert sequence Length = 2762 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 2300 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 2248
>dbj|AK103405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D05, full insert sequence Length = 1271 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 928 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 876
>dbj|AK062076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F04, full insert sequence Length = 1771 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 523 cttctcggccgctgctgtttgggccacctttgccgcgtaggtaacggctggag 575 |||||| | ||||||||||||||| ||||| || || ||||||||| |||||| Sbjct: 1264 cttctcagtcgctgctgtttgggcgaccttcgctgcataggtaacgactggag 1212
>emb|BX035467.1|CNS08ZJ3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA6DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 595 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 513 ccgcaggcttcttctcggccgctgctg 539 |||| |||||||||||||||||||||| Sbjct: 381 ccgccggcttcttctcggccgctgctg 407
>emb|BX066712.1|CNS09NN0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50AE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 804 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 701 ggcttcttctcggccgctgctg 722
>emb|BX058217.1|CNS09H31 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC38BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 848 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 349 ggcttcttctcggccgctgctg 370
>emb|BX055758.1|CNS09F6Q Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC34CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 820 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 366 ggcttcttctcggccgctgctg 387
>emb|BX050629.1|CNS09B89 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27AH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 491 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 343 ggcttcttctcggccgctgctg 364
>emb|BX048891.1|CNS099VZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 582 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 352 ggcttcttctcggccgctgctg 373
>emb|BX048575.1|CNS099N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 692 ggcttcttctcggccgctgctg 671
>emb|BX047759.1|CNS0990J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC22BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 333 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 154 ggcttcttctcggccgctgctg 175
>emb|BX047713.1|CNS098Z9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC22BE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 354 ggcttcttctcggccgctgctg 375
>emb|BX039669.1|CNS092RT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 765 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 377 ggcttcttctcggccgctgctg 398
>emb|BX037240.1|CNS090WC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 759 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 377 ggcttcttctcggccgctgctg 398
>emb|BX036580.1|CNS090E0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA8CD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 541 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 199 ggcttcttctcggccgctgctg 220
>emb|BX036124.1|CNS0901C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 367 ggcttcttctcggccgctgctg 388
>emb|BX029509.1|CNS08UXL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 879 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 356 ggcttcttctcggccgctgctg 377
>emb|BX028945.1|CNS08UHX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 469 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 368 ggcttcttctcggccgctgctg 389
>emb|BX028103.1|CNS08TUJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 459 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 361 ggcttcttctcggccgctgctg 382
>emb|BX027649.1|CNS08THX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 289 ggcttcttctcggccgctgctg 310
>emb|BX027278.1|CNS08T7M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 361 ggcttcttctcggccgctgctg 382
>emb|BX026134.1|CNS08SBU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 651 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 281 ggcttcttctcggccgctgctg 302
>emb|BX020909.1|CNS08OAP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 711 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 332 ggcttcttctcggccgctgctg 353
>emb|BX019905.1|CNS08NIT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA3BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1030 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 370 ggcttcttctcggccgctgctg 391
>emb|BX017103.1|CNS08LCZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25CG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 574 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 353 ggcttcttctcggccgctgctg 374
>emb|BX016863.1|CNS08L6B Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 657 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 304 ggcttcttctcggccgctgctg 325
>emb|BX010707.1|CNS08GFB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA17AG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 749 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 350 ggcttcttctcggccgctgctg 371
>emb|BX010159.1|CNS08G03 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 369 ggcttcttctcggccgctgctg 390
>emb|BX010158.1|CNS08G02 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 731 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 669 ggcttcttctcggccgctgctg 648
>emb|BX009177.1|CNS08F8T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA14DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 368 ggcttcttctcggccgctgctg 389
>emb|BX007586.1|CNS08E0M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgctg 539 |||||||||||||||||||||| Sbjct: 362 ggcttcttctcggccgctgctg 383
>gb|AY596616.1| Saccharum officinarum clone SCCCCL3005B06, complete sequence Length = 2129 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 tgctgtttgggccacctttgc 555 ||||||||||||||||||||| Sbjct: 1655 tgctgtttgggccacctttgc 1635
>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence Length = 236274 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 ctttctctgccggaaccttca 614 ||||||||||||||||||||| Sbjct: 107700 ctttctctgccggaaccttca 107720
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 659 ttgatggcatcctgttgtttc 679 ||||||||||||||||||||| Sbjct: 94318 ttgatggcatcctgttgtttc 94298
>ref|XM_695555.1| PREDICTED: Danio rerio similar to Farnesyl-diphosphate farnesyltransferase (Squalene synthetase) (SQS) (SS) (FPP:FPP farnesyltransferase) (LOC571911), partial mRNA Length = 752 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 ctggaggaccagcagcagggg 590 ||||||||||||||||||||| Sbjct: 292 ctggaggaccagcagcagggg 312
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cggctggaggaccagcagcag 587 ||||||||||||||||||||| Sbjct: 616609 cggctggaggaccagcagcag 616629
>ref|NM_208906.1| Eremothecium gossypii ACR151Wp (ACR151W), mRNA Length = 2649 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cggctggaggaccagcagcag 587 ||||||||||||||||||||| Sbjct: 265 cggctggaggaccagcagcag 285
>gb|AY007505.3| Streptococcus mitis phage SM1,complete genome Length = 34692 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ggagacttcggcttcccatt 660 |||||||||||||||||||| Sbjct: 12036 ggagacttcggcttcccatt 12017
>gb|AY430810.1| Neodiprion sertifer nucleopolyhdrovirus, complete genome Length = 86462 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cattacgtttgttcctcatg 427 |||||||||||||||||||| Sbjct: 10531 cattacgtttgttcctcatg 10550
>gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosome Y, complete sequence Length = 149994 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 acaagagaaaaaggaggagc 314 |||||||||||||||||||| Sbjct: 104706 acaagagaaaaaggaggagc 104725
>gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosome 6, complete sequence Length = 185099 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 catggctagctgggaggatc 443 |||||||||||||||||||| Sbjct: 129909 catggctagctgggaggatc 129928
>emb|Z93397.1|CEZC482 Caenorhabditis elegans Cosmid ZC482, complete sequence Length = 36302 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tttccttttctctttttctg 214 |||||||||||||||||||| Sbjct: 35437 tttccttttctctttttctg 35418
>gb|AC074193.6| Homo sapiens BAC clone RP11-611P20 from 7, complete sequence Length = 44380 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaacagggatgatgatagta 286 |||||||||||||||||||| Sbjct: 33833 aaacagggatgatgatagta 33814
>gb|AC079809.4| Homo sapiens BAC clone RP11-958M14 from 7, complete sequence Length = 102918 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 caagagaaaaaggaggagctaggggaac 323 ||||| |||||||||||| ||||||||| Sbjct: 100575 caagaaaaaaaggaggaggtaggggaac 100548
>emb|AL139241.11| Human DNA sequence from clone RP11-34A14 on chromosome 10 Contains the 3' end of gene FLJ37160, the LOXL4 gene for lysyl oxidase-like 4, a novel gene and a CpG island, complete sequence Length = 188192 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tttccttttctctttttctg 214 |||||||||||||||||||| Sbjct: 19096 tttccttttctctttttctg 19077
>emb|AL049176.3|HS141H5 Human DNA sequence from clone RP6-141H5 on chromosome Xq22.1-23 Contains the 3' end of the gene for a likely ortholog of mouse neuralin 1 (NRLN1), complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tgtcttgccacaggtttcct 200 |||||||||||||||||||| Sbjct: 42276 tgtcttgccacaggtttcct 42257
>emb|AL035461.11|HS967N21 Human DNA sequence from clone RP5-967N21 on chromosome 20p12.3-13 Contains the CHGB gene for chromogranin B (secretogranin 1), a novel pseudogene, the gene for CGI-09 protein (CGI-09), the C20orf154 gene for a novel MCM2/3/5 family member, a pseudogene similar to part of cytochrome c oxidase I, the C20orf155 gene for a novel CDP-alcohol phosphatidyltransferase family member, the 3' end of a novel gene and four CpG islands, complete sequence Length = 139352 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 aggtttccttttctcttttt 211 |||||||||||||||||||| Sbjct: 102619 aggtttccttttctcttttt 102600
>emb|BX013132.1|CNS08IAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 909 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ggcttcttctcggccgctgc 537 |||||||||||||||||||| Sbjct: 377 ggcttcttctcggccgctgc 396
>gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, complete sequence Length = 179246 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 aaacagggatgatgatagta 286 |||||||||||||||||||| Sbjct: 164637 aaacagggatgatgatagta 164656
>gb|AC011355.6| Homo sapiens chromosome 5 clone CTC-354H18, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gtttccttttctctttttct 213 |||||||||||||||||||| Sbjct: 52890 gtttccttttctctttttct 52871
>gb|AC096949.2| Homo sapiens chromosome 1 clone RP4-581O6, complete sequence Length = 106449 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tttccttttctctttttctg 214 |||||||||||||||||||| Sbjct: 94582 tttccttttctctttttctg 94563
>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence Length = 155247 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 acaagagaaaaaggaggagc 314 |||||||||||||||||||| Sbjct: 6323 acaagagaaaaaggaggagc 6342
>gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, complete sequence Length = 164479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaacagggatgatgatagta 286 |||||||||||||||||||| Sbjct: 115439 aaacagggatgatgatagta 115420
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aggggcggctttctctgccg 605 |||||||||||||||||||| Sbjct: 6843 aggggcggctttctctgccg 6862
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aggggcggctttctctgccg 605 |||||||||||||||||||| Sbjct: 59108 aggggcggctttctctgccg 59127
>gb|AC126425.2| Lemur catta, clone -162D1, complete sequence Length = 154718 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tttccttttctctttttctg 214 |||||||||||||||||||| Sbjct: 27273 tttccttttctctttttctg 27254
>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence Length = 155606 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tttccttttctctttttctg 214 |||||||||||||||||||| Sbjct: 90464 tttccttttctctttttctg 90483
>gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complete sequence Length = 159991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 agagaaaaaggaggagctag 317 |||||||||||||||||||| Sbjct: 124092 agagaaaaaggaggagctag 124073
>gb|AC093901.2| Homo sapiens BAC clone RP11-730J4 from 2, complete sequence Length = 161153 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ttccttttctctttttctgc 215 |||||||||||||||||||| Sbjct: 144694 ttccttttctctttttctgc 144675
>gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, complete sequence Length = 190728 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gtttccttttctctttttct 213 |||||||||||||||||||| Sbjct: 22737 gtttccttttctctttttct 22718
>gb|AC151581.2| Pan troglodytes BAC clone RP43-166C19 from chromosome 7, complete sequence Length = 180623 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caagagaaaaaggaggagctaggggaac 323 ||||| |||||||||||| ||||||||| Sbjct: 140763 caagaaaaaaaggaggaggtaggggaac 140790
>gb|AC138070.3| Homo sapiens chromosome 3 clone RP11-263E3, complete sequence Length = 169834 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 aaacagggatgatgatagta 286 |||||||||||||||||||| Sbjct: 17593 aaacagggatgatgatagta 17612
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggcttcttctcggtcaccgc 516 |||||||||||||||||||| Sbjct: 1176320 ggcttcttctcggtcaccgc 1176339
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 tttctctttttctgccgatt 220 |||||||||||||||||||| Sbjct: 74780 tttctctttttctgccgatt 74761
>emb|AL121769.4|CNS01DSD Human chromosome 14 DNA sequence BAC R-299L17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167344 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 aacaagagaaaaaggaggag 313 |||||||||||||||||||| Sbjct: 65335 aacaagagaaaaaggaggag 65354
>dbj|AP002987.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-428C14, complete sequence Length = 166893 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 caggtttccttttctctttt 210 |||||||||||||||||||| Sbjct: 74125 caggtttccttttctctttt 74144
>dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-956A8, complete sequence Length = 114109 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tttagagctaagcaaactga 267 |||||||||||||||||||| Sbjct: 94632 tttagagctaagcaaactga 94651
>dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-640N11, complete sequence Length = 161547 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tttagagctaagcaaactga 267 |||||||||||||||||||| Sbjct: 31460 tttagagctaagcaaactga 31479
>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence Length = 177014 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 agagaaaaaggaggagctag 317 |||||||||||||||||||| Sbjct: 59532 agagaaaaaggaggagctag 59513
>dbj|AP001862.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2060O22, complete sequence Length = 111557 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 agagaaaaaggaggagctag 317 |||||||||||||||||||| Sbjct: 78153 agagaaaaaggaggagctag 78134 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,407,173 Number of Sequences: 3902068 Number of extensions: 5407173 Number of successful extensions: 117388 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117040 Number of HSP's gapped (non-prelim): 348 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)