Clone Name | rbags9i16 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 Score = 1237 bits (624), Expect = 0.0 Identities = 667/676 (98%), Gaps = 4/676 (0%) Strand = Plus / Minus Query: 1 aatgtaacatggtagataggagaattattcc-gagaattacataggataacaaaagtcac 59 |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| Sbjct: 764 aatgtaacatggtagatatgagaattattccagagaattacataggataactaaagtcac 705 Query: 60 ttgatctattcgattttgacaactagactcctttgtttgaccatggtaatagaatgttca 119 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 704 ttgatctattcgattttgacaaccagactcctttgtttgaccatggtaatagaatgttca 645 Query: 120 tgtctcattgcgtctgccctacaagagtaagttcccc-atacatagtcctattcgatttg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 644 tgtctcattgcgtctgccctacaagagtaagttcccctatacatagtcctattcgatttg 585 Query: 179 gtaactgggcgaacttgctgcgccgagctgcctacagatcactatcagcgacatcctcgt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gtaactgggcgaacttgctgcgccgagctgcctacagatcactatcagcgacatcctcgt 525 Query: 239 ctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatgagagttg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 ctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatgagagttg 465 Query: 299 ctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagggatct 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 ctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagggatct 405 Query: 359 tcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcctttgatca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcctttgatca 345 Query: 419 cttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaatcaaaaa 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 cttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaatcaaaaa 285 Query: 479 ctgttccatcggtaagtgttccacgggtagtgaactttaactctgtctcctttgtgagcc 538 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 284 ctgttccatcggtaagtgttccac-ggtagtgaactttaactctgtctcctttgtgagcc 226 Query: 539 gagatgctgcacgattctggcttgtacttgacgccgatctggagcgccggacacgtcgcc 598 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 225 gagatgctgcacgattctggcttgtacttgacgccgatctggagtgcc-gacacgtcgcc 167 Query: 599 ggacttcttggcggaggcgacgagcaggagcgcggcggcgacgaccagcaggcagagaag 658 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 166 ggacttcttggcggaggcgacgagcaggagcgcggcggccacgaccagcaggcagagaag 107 Query: 659 aagccccggcttcgcc 674 |||||||||||||||| Sbjct: 106 aagccccggcttcgcc 91
>dbj|AK063115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D12, full insert sequence Length = 683 Score = 383 bits (193), Expect = e-103 Identities = 339/385 (88%), Gaps = 2/385 (0%) Strand = Plus / Minus Query: 232 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 291 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 485 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 426 Query: 292 agagttgctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaa 351 ||||| ||||| || || ||||| || ||||| || ||| | || || |||||||||||| Sbjct: 425 agagtcgctccaccagggatggtcggcggtgacccttgagcaccataaccgagctttgaa 366 Query: 352 gggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcct 411 ||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| ||| Sbjct: 365 gggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccctgatcccaccct 306 Query: 412 ttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaa 471 ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 305 ttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagctagaa 246 Query: 472 tcaaaaactgttccatcggtaagtgttccacgggtagtgaactttaactctgtctccttt 531 |||||| |||||||||| |||||| |||||| |||||||||||||||||||||| ||||| Sbjct: 245 tcaaaatctgttccatcagtaagttttccac-ggtagtgaactttaactctgtcgccttt 187 Query: 532 gtgagccgagatgctgcacgattctggcttgtacttgacgccgatctggagcgccggaca 591 |||||| |||||||| ||||||||||||| ||||||||||||||||||| || | || Sbjct: 186 gtgagcttgaatgctgcaggattctggcttgtgcttgacgccgatctggagctcc-gtca 128 Query: 592 cgtcgccggacttcttggcggaggc 616 |||||||||| |||||||||||||| Sbjct: 127 cgtcgccggatttcttggcggaggc 103
>gb|AY105607.1| Zea mays PCO107138 mRNA sequence Length = 808 Score = 333 bits (168), Expect = 4e-88 Identities = 356/416 (85%), Gaps = 2/416 (0%) Strand = Plus / Minus Query: 259 ccattgactgcgacaagctctgtgtcgaatatgagagttgctccgcctggaatggtaggt 318 |||||||| ||||||||||| ||||| |||||||| |||||||| || ||||| |||||| Sbjct: 508 ccattgacagcgacaagctccgtgtcaaatatgagggttgctccaccaggaatagtaggt 449 Query: 319 ggtgatccctgatccccgtagccgagctttgaagggatcttcagcttcctcttctcacca 378 || || || ||| ||| ||||| |||||||| |||||||||| ||||| ||| |||||| Sbjct: 448 ggcgagccttgaggcccatagccaagctttgatgggatcttcaacttccgcttttcacca 389 Query: 379 atgcacatgcccaaaattccctgatcccatcctttgatcacttgaccagtgcccaattca 438 | |||||| |||| | |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 388 acgcacattcccaggagaccctgatcccatcctttgatcacttgtccagtgcccaattca 329 Query: 439 aattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgtt 498 |||||||| |||||||| ||||||||||| ||||||||||| |||||||| |||||| || Sbjct: 328 aattcaatcgggtcacctctttcatagcttgaatcaaaaaccgttccatcagtaagtttt 269 Query: 499 ccacgggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctgg 558 |||| |||||||||||||||| |||| ||||||||||| |||||||| ||||| || Sbjct: 268 ccac-ggtagtgaactttaaccttgtcacctttgtgagcttgaatgctgcatgattccgg 210 Query: 559 cttgtacttgacgccgatctggagcgccggacacgtcgccggacttcttggcggaggcga 618 ||||||||||||||||||||||||| || |||||||| ||||| |||||||| | ||||| Sbjct: 209 cttgtacttgacgccgatctggagctcc-gacacgtccccggatttcttggccgtggcga 151 Query: 619 cgagcaggagcgcggcggcgacgaccagcaggcagagaagaagccccggcttcgcc 674 ||| || |||||| |||| ||| || | |||||||||||| |||||||||| Sbjct: 150 cgattagcggcgcggaggcggcgagtaggaaacagagaagaagctgcggcttcgcc 95
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 409 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 468 |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 54865 cctttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagcta 54924 Query: 469 gaatcaaaaactgttccatcggtaagtgttcc 500 ||||||||| |||||||||| |||||| |||| Sbjct: 54925 gaatcaaaatctgttccatcagtaagttttcc 54956 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 340 ccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccc 399 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| Sbjct: 54688 ccgagctttgaagggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccc 54747 Query: 400 tgatccca 407 |||||||| Sbjct: 54748 tgatccca 54755 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 504 ggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctggcttgt 563 |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 55062 ggtagtgaactttaactctgtcgcctttgtgagcttgaatgctgcaggattctggcttgt 55121 Score = 63.9 bits (32), Expect = 6e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 565 cttgacgccgatctggagcgccggacacgtcgccggacttcttggcggaggc 616 ||||||||||||||||||| ||| |||||||||||| |||||||||||||| Sbjct: 56406 cttgacgccgatctggagctccgt-cacgtcgccggatttcttggcggaggc 56456 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 232 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 291 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 54350 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 54409 Query: 292 agagttgctccgcctg 307 ||||| ||||| |||| Sbjct: 54410 agagtcgctccacctg 54425
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 409 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 468 |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 19124452 cctttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagcta 19124511 Query: 469 gaatcaaaaactgttccatcggtaagtgttcc 500 ||||||||| |||||||||| |||||| |||| Sbjct: 19124512 gaatcaaaatctgttccatcagtaagttttcc 19124543 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 340 ccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccc 399 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| Sbjct: 19124275 ccgagctttgaagggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccc 19124334 Query: 400 tgatccca 407 |||||||| Sbjct: 19124335 tgatccca 19124342 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 504 ggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctggcttgt 563 |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 19124649 ggtagtgaactttaactctgtcgcctttgtgagcttgaatgctgcaggattctggcttgt 19124708 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 232 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 291 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 19123937 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 19123996 Query: 292 agagttgctccgcctg 307 ||||| ||||| |||| Sbjct: 19123997 agagtcgctccacctg 19124012 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 608 ggcggaggcgacgagcaggagcgcggcggcgac 640 ||||| ||||||||| ||||| ||||||||||| Sbjct: 16876533 ggcggcggcgacgaggaggagggcggcggcgac 16876501
>gb|U52045.1|VFU52045 Vicia faba immunophilin precursor (FKBP15) mRNA, complete cds Length = 750 Score = 87.7 bits (44), Expect = 4e-14 Identities = 128/156 (82%) Strand = Plus / Minus Query: 271 acaagctctgtgtcgaatatgagagttgctccgcctggaatggtaggtggtgatccctga 330 |||||||| ||||| ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 484 acaagctcagtgtcaaatataagtgttgcaccacctggaatagttggtggggaaccctgc 425 Query: 331 tccccgtagccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgccc 390 || || ||||| || |||| ||||| ||||| || | ||||||||||| ||||| ||| Sbjct: 424 tctccatagccaagttttgctgggattttcagttttcgcttctcaccaagacacattccc 365 Query: 391 aaaattccctgatcccatcctttgatcacttgacca 426 || | ||| || |||||||||||||||||||||||| Sbjct: 364 aataatccttggtcccatcctttgatcacttgacca 329
>ref|NM_189935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 61.9 bits (31), Expect = 3e-06 Identities = 141/174 (81%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 438 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgt 497 |||||||| |||||||| || ||||||||||||||||| |||| |||||| || |||| Sbjct: 216 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatcagtgagtga 157 Query: 498 tccacgggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctg 557 |||| | || || ||||| | | |||||||||||||||| | | |||| || |||| Sbjct: 156 cccac-gataatgcactttgattttgtctcctttgtgagcttgcagggtgcatgactctg 98 Query: 558 gcttgtacttgacgccgatctggagcgccg-gacacgtcgccggacttcttggc 610 |||||||||| || |||||||| ||| ||| |||| || |||||||||||||| Sbjct: 97 gcttgtacttcacaccgatctgaagctccgtgaca--tctccggacttcttggc 46
>dbj|AK103859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148P20, full insert sequence Length = 713 Score = 61.9 bits (31), Expect = 3e-06 Identities = 141/174 (81%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 438 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgt 497 |||||||| |||||||| || ||||||||||||||||| |||| |||||| || |||| Sbjct: 275 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatcagtgagtga 216 Query: 498 tccacgggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctg 557 |||| | || || ||||| | | |||||||||||||||| | | |||| || |||| Sbjct: 215 cccac-gataatgcactttgattttgtctcctttgtgagcttgcagggtgcatgactctg 157 Query: 558 gcttgtacttgacgccgatctggagcgccg-gacacgtcgccggacttcttggc 610 |||||||||| || |||||||| ||| ||| |||| || |||||||||||||| Sbjct: 156 gcttgtacttcacaccgatctgaagctccgtgaca--tctccggacttcttggc 105
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 409 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 468 |||||||||||||||||| || | ||||| |||||||||| | |||||| ||||| Sbjct: 18582 cctttgatcacttgaccaccaccaagctcaaaatcaattgggttatttctttcaaagcta 18523 Query: 469 gaatcaaaaactgttccatcggtaagtgttcc 500 ||||| ||||| ||||||||||| ||| |||| Sbjct: 18522 gaatcgaaaacagttccatcggtgagttttcc 18491 Score = 48.1 bits (24), Expect = 0.038 Identities = 87/108 (80%) Strand = Plus / Minus Query: 304 cctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagggatcttcagc 363 |||||||| || ||||| || ||||| || ||||||||||| |||| || || ||||| Sbjct: 19873 cctggaatagtgggtggggaaccctgctctccgtagccgagttttgctggtattttcagt 19814 Query: 364 ttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcct 411 || | ||||||||||| ||||| ||||| | ||| || ||||||||| Sbjct: 19813 tttcgcttctcaccaagacacattcccaataatccttggtcccatcct 19766
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 438 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatc 488 |||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 39908240 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatc 39908290 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaatgttcatgtctcattg 129 |||||||||||||||||||| Sbjct: 3559354 agaatgttcatgtctcattg 3559373
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 438 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatc 488 |||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 88948 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatc 88998
>ref|NM_124234.2| Arabidopsis thaliana FKBP15-2; FK506 binding / peptidyl-prolyl cis-trans isomerase AT5G48580 (FKBP15-2) mRNA, complete cds Length = 740 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 302 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 243 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 242 tcaaaactcgaatcgaatacagttccatcagtaagt 207
>ref|NM_113428.2| Arabidopsis thaliana FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase AT3G25220 (FKBP15-1) mRNA, complete cds Length = 684 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 357 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 298 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | || |||||||| || |||||||| Sbjct: 297 ctctcaaaacttgaatcaaagacagttccatc 266
>ref|XM_367309.1| Magnaporthe grisea 70-15 hypothetical protein (MG07234.4) partial mRNA Length = 603 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 365 tcctcttctcaccaatgcacatgcccaaaattccctgatcccatcctttgatcact 420 |||||||||| |||||||||||| |||| | ||| |||||||| || || |||||| Sbjct: 328 tcctcttctcgccaatgcacatgtccaacaatccttgatcccagcccttaatcact 273
>gb|BT012057.1| Arabidopsis thaliana At3g25220 mRNA sequence Length = 387 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 209 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 150 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | || |||||||| || |||||||| Sbjct: 149 ctctcaaaacttgaatcaaagacagttccatc 118
>gb|AY059146.1| Arabidopsis thaliana putative peptidyl-prolyl cis-trans isomerase (At5g48580) mRNA, complete cds Length = 523 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 281 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 222 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 221 tcaaaactcgaatcgaatacagttccatcagtaagt 186
>gb|AF370159.1| Arabidopsis thaliana putative peptidyl-prolyl cis-trans isomerase (At5g48580) mRNA, complete cds Length = 708 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 299 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 240 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 239 tcaaaactcgaatcgaatacagttccatcagtaagt 204
>gb|AY128760.1| Arabidopsis thaliana immunophilin (At3g25220) mRNA, complete cds Length = 519 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 284 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 225 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | || |||||||| || |||||||| Sbjct: 224 ctctcaaaacttgaatcaaagacagttccatc 193
>gb|AY062776.1| Arabidopsis thaliana immunophilin (At3g25220; MJL12.17) mRNA, complete cds Length = 639 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 312 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 253 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | || |||||||| || |||||||| Sbjct: 252 ctctcaaaacttgaatcaaagacagttccatc 221
>emb|BX833996.1|CNS0A0IF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZC04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 634 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 252 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 193 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 192 tcaaaactcgaatcgaatacagttccatcagtaagt 157
>gb|AY085294.1| Arabidopsis thaliana clone 143222 mRNA, complete sequence Length = 672 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 302 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 243 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 242 tcaaaactcgaatcgaatacagttccatcagtaagt 207
>gb|U52047.1|ATU52047 Arabidopsis thaliana immunophilin (FKBP15-2) mRNA, complete cds Length = 662 Score = 48.1 bits (24), Expect = 0.038 Identities = 78/96 (81%) Strand = Plus / Minus Query: 400 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 459 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 285 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 226 Query: 460 tcatagctagaatcaaaaactgttccatcggtaagt 495 ||| | || ||||| || || |||||||| |||||| Sbjct: 225 tcaaaactcgaatcgaatacagttccatcagtaagt 190
>gb|U52046.1|ATU52046 Arabidopsis thaliana immunophilin (FKBP15-1) mRNA, complete cds Length = 618 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 287 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 228 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | || |||||||| || |||||||| Sbjct: 227 ctctcaaaacttgaatcaaagacagttccatc 196
>ref|XM_478685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcgacg 641 ||||||||||||||||||||||| Sbjct: 34 cgagcaggagcgcggcggcgacg 12
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 619 cgagcaggagcgcggcggcgacg 641 ||||||||||||||||||||||| Sbjct: 22204841 cgagcaggagcgcggcggcgacg 22204863 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 611 ggaggcgacgagcaggagcgcggcggcgacgac 643 |||||||||||||| | ||||||||||||||| Sbjct: 24427108 ggaggcgacgagcacggccgcggcggcgacgac 24427076 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 615 gcgacgagcaggagcgcggcggcga 639 |||||||| |||||||||||||||| Sbjct: 21067799 gcgacgaggaggagcgcggcggcga 21067775
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 619 cgagcaggagcgcggcggcgacg 641 ||||||||||||||||||||||| Sbjct: 10087 cgagcaggagcgcggcggcgacg 10109
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 628 gcgcggcggcgacgaccagcag 649 |||||||||||||||||||||| Sbjct: 40550 gcgcggcggcgacgaccagcag 40571
>ref|NM_022600.1| Rattus norvegicus adenylate cyclase 5 (Adcy5), mRNA Length = 4847 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 745 gcaggagcgcggcggcgacgac 766
>ref|NM_183357.1| Homo sapiens adenylate cyclase 5 (ADCY5), mRNA Length = 3842 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 309 gcaggagcgcggcggcgacgac 330
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcgacgacca 645 ||||||||||||||||||||| |||| Sbjct: 18623 gagcaggagcgcggcggcgaccacca 18598
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 610 cggaggcgacgagcaggagcgcggcggcga 639 ||||||||||||||| ||||||| |||||| Sbjct: 1786225 cggaggcgacgagcacgagcgcgccggcga 1786254
>ref|XM_580301.2| PREDICTED: Bos taurus similar to adenylate cyclase 5 (LOC538432), mRNA Length = 1701 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 849 gcaggagcgcggcggcgacgac 870
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 gcgcggcggcgacgaccagcag 649 |||||||||||||||||||||| Sbjct: 77132 gcgcggcggcgacgaccagcag 77111
>emb|Z29371.1|OCMRADCYV O.cuniculus mRNA for adenylyl cyclase type V Length = 4995 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 903 gcaggagcgcggcggcgacgac 924
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcgac 640 |||||||||||||||||||||| Sbjct: 230625 cgagcaggagcgcggcggcgac 230604
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159902 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 94944 gcaggagcgcggcggcgacgac 94923
>dbj|AB227133.1| Aspergillus oryzae cDNA, contig sequence: AoEST3996 Length = 569 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 369 cttctcaccaatgcacatgcccaaaattccctgatcccatcc 410 |||||||||||||||||| |||||| |||| ||||||||| Sbjct: 366 cttctcaccaatgcacatatccaaaagaccctcatcccatcc 325
>tpg|BK000371.1| TPA: TPA_exp: Homo sapiens adenylyl cyclase type V (ADCY5) mRNA, partial cds Length = 1134 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 309 gcaggagcgcggcggcgacgac 330
>emb|AL112386.1|CNS01A22 Botrytis cinerea strain T4 cDNA library Length = 900 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 aacatggtagataggagaatta 27 |||||||||||||||||||||| Sbjct: 577 aacatggtagataggagaatta 556
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcgacgacca 645 ||||||||||||||||||||| |||| Sbjct: 26736684 gagcaggagcgcggcggcgaccacca 26736659
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 634 cggcgacgaccagcaggcagag 655 |||||||||||||||||||||| Sbjct: 2456278 cggcgacgaccagcaggcagag 2456257
>dbj|AK102925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D17, full insert sequence Length = 1474 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcgacgacca 645 ||||||||||||||||||||| |||| Sbjct: 98 gagcaggagcgcggcggcgaccacca 73
>gb|M88649.1|DOGADNCYC Canis familiaris adenylyl cyclase type V mRNA, partial cds Length = 4545 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 453 gcaggagcgcggcggcgacgac 474
>gb|M96159.1|RATADCYA Rattus norvegicus adenylyl cyclase type V mRNA, complete cds Length = 4847 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 745 gcaggagcgcggcggcgacgac 766
>gb|M97886.1|DOGADCYC Canis familiaris adenylyl cyclase (truncated form) mRNA, complete cds, Length = 2429 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gcaggagcgcggcggcgacgac 643 |||||||||||||||||||||| Sbjct: 266 gcaggagcgcggcggcgacgac 287
>ref|NM_185884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2088 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 615 gcgacgagcaggagcgcggcggcga 639 |||||||| |||||||||||||||| Sbjct: 53 gcgacgaggaggagcgcggcggcga 29
>ref|XM_513867.1| PREDICTED: Pan troglodytes LOC457376 (LOC457376), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 122 accagcaggcagagaagaagc 142
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence Length = 288050 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 623 caggagcgcggcggcgacgaccagc 647 ||||||||||||| ||||||||||| Sbjct: 168063 caggagcgcggcgacgacgaccagc 168087
>gb|BC004291.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:10881 IMAGE:3621175), complete cds Length = 2950 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 305 accagcaggcagagaagaagc 325
>ref|XM_870499.1| PREDICTED: Bos taurus similar to Synaptotagmin-11 (Synaptotagmin XI) (SytXI) (LOC618177), mRNA Length = 1514 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 343 accagcaggcagagaagaagc 363
>ref|NM_018804.2| Mus musculus synaptotagmin XI (Syt11), mRNA Length = 3510 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 338 accagcaggcagagaagaagc 358
>ref|XM_001005820.1| PREDICTED: Mus musculus similar to synaptotagmin XI (LOC673549), mRNA Length = 879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 101 accagcaggcagagaagaagc 121
>ref|XM_981500.1| PREDICTED: Mus musculus synaptotagmin XI (Syt11), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 101 accagcaggcagagaagaagc 121
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggtaatagaatgttcatgtct 124 ||||||||||||||||||||| Sbjct: 208517 ggtaatagaatgttcatgtct 208537
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggtaatagaatgttcatgtct 124 ||||||||||||||||||||| Sbjct: 4019 ggtaatagaatgttcatgtct 4039
>emb|AL139128.24| Human DNA sequence from clone RP11-101O6 on chromosome 1 Contains the gene for a novel protein (FLJ20203), a proteasome (prosome, macropain) 26S subunit non-ATPase 7 (Mov34 homolog) (PSMD7) pseudogene, the SYT11 gene for synaptotagmin XI. the 3' end of RIT1 Ras-like without CAAX 1 and the 5' end of the gene for a novel protein (FLJ20203), complete sequence Length = 144833 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 104565 accagcaggcagagaagaagc 104585
>gb|AC083845.15| Homo sapiens, clone RP11-459L5, complete sequence Length = 132843 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 tctgccctacaagagtaagttcccc 156 |||||| |||||||||||||||||| Sbjct: 40449 tctgccttacaagagtaagttcccc 40425
>gb|BC039205.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:26698 IMAGE:4819614), complete cds Length = 5103 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 375 accagcaggcagagaagaagc 395
>gb|BC054526.1| Mus musculus synaptotagmin XI, mRNA (cDNA clone MGC:62226 IMAGE:5698412), complete cds Length = 3510 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 338 accagcaggcagagaagaagc 358
>emb|CR749792.1| Homo sapiens mRNA; cDNA DKFZp781D015 (from clone DKFZp781D015) Length = 3505 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 320 accagcaggcagagaagaagc 340
>dbj|AK074931.1| Homo sapiens cDNA FLJ90450 fis, clone NT2RP3001388, highly similar to Synaptotagmin XI (SytXI) Length = 3691 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 317 accagcaggcagagaagaagc 337
>dbj|AK027540.1| Homo sapiens cDNA FLJ14634 fis, clone NT2RP2001081, moderately similar to SYNAPTOTAGMIN IV Length = 2315 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 317 accagcaggcagagaagaagc 337
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 369 cttctcaccaatgcacatgcccaaaattccctgatcccatc 409 |||||||||||||||||| |||||| |||| |||||||| Sbjct: 4024960 cttctcaccaatgcacatatccaaaagaccctcatcccatc 4024920
>dbj|AK133414.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933421O05 product:synaptotagmin 11, full insert sequence Length = 2341 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 824 accagcaggcagagaagaagc 844
>dbj|AK144169.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:G430061N11 product:synaptotagmin 11, full insert sequence Length = 2629 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 315 accagcaggcagagaagaagc 335
>dbj|AK164368.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130075L09 product:synaptotagmin 11, full insert sequence Length = 2661 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 350 accagcaggcagagaagaagc 370
>dbj|AK158745.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230309O16 product:synaptotagmin 11, full insert sequence Length = 2607 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 293 accagcaggcagagaagaagc 313
>dbj|AK164082.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530003N14 product:synaptotagmin 11, full insert sequence Length = 1222 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 315 accagcaggcagagaagaagc 335
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 627 agcgcggcggcgacgaccagc 647 ||||||||||||||||||||| Sbjct: 3100197 agcgcggcggcgacgaccagc 3100177
>gb|AC022468.5|AC022468 Homo sapiens chromosome 15 clone RP11-546B15 map 15q15, complete sequence Length = 183539 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cctttcatagctagaatcaaa 476 ||||||||||||||||||||| Sbjct: 117524 cctttcatagctagaatcaaa 117504
>dbj|D38522.2|HUMORF002 Homo sapiens KIAA0080 mRNA, partial cds Length = 5974 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 344 accagcaggcagagaagaagc 364
>gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, complete sequence Length = 203148 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 tctgccctacaagagtaagttcccc 156 |||||| |||||||||||||||||| Sbjct: 164025 tctgccttacaagagtaagttcccc 164001
>ref|NM_152280.2| Homo sapiens synaptotagmin XI (SYT11), mRNA Length = 5103 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 375 accagcaggcagagaagaagc 395
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 ggcgacgagcaggagcgcggc 634 ||||||||||||||||||||| Sbjct: 1769146 ggcgacgagcaggagcgcggc 1769126
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 615 gcgacgagcaggagcgcggcggcga 639 |||||||| |||||||||||||||| Sbjct: 111098 gcgacgaggaggagcgcggcggcga 111074
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 627 agcgcggcggcgacgaccagc 647 ||||||||||||||||||||| Sbjct: 1767658 agcgcggcggcgacgaccagc 1767638
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 608 ggcggaggcgacgagcaggagcgcggcggcgac 640 ||||| ||||||||| ||||| ||||||||||| Sbjct: 6346 ggcggcggcgacgaggaggagggcggcggcgac 6314
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 608 ggcggaggcgacgagcaggagcgcggcggcgac 640 ||||| ||||||||| ||||| ||||||||||| Sbjct: 74224 ggcggcggcgacgaggaggagggcggcggcgac 74192
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 611 ggaggcgacgagcaggagcgcggcggcgacgac 643 |||||||||||||| | ||||||||||||||| Sbjct: 52975 ggaggcgacgagcacggccgcggcggcgacgac 52943
>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full insert sequence Length = 1738 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 608 ggcggaggcgacgagcaggagcgcggcggcgac 640 ||||| ||||||||| ||||| ||||||||||| Sbjct: 199 ggcggcggcgacgaggaggagggcggcggcgac 167
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 gcgacgagcaggagcgcggcg 635 ||||||||||||||||||||| Sbjct: 2205541 gcgacgagcaggagcgcggcg 2205561
>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full insert sequence Length = 1642 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 608 ggcggaggcgacgagcaggagcgcggcggcgac 640 ||||| ||||||||| ||||| ||||||||||| Sbjct: 144 ggcggcggcgacgaggaggagggcggcggcgac 112
>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence Length = 206439 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 167552 accagcaggcagagaagaagc 167532
>gb|BC013690.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:17226 IMAGE:4179089), complete cds Length = 2378 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 352 accagcaggcagagaagaagc 372
>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence Length = 169326 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 ggtaatagaatgttcatgtct 124 ||||||||||||||||||||| Sbjct: 65876 ggtaatagaatgttcatgtct 65856
>dbj|AB026808.1| Mus musculus mRNA for synaptotagmin XI, complete cds Length = 1293 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 accagcaggcagagaagaagc 662 ||||||||||||||||||||| Sbjct: 122 accagcaggcagagaagaagc 142
>gb|AY423023.1| Danio rerio KIAA1376-like protein mRNA, complete cds Length = 2687 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 catgcccaaaattccctgat 403 |||||||||||||||||||| Sbjct: 1795 catgcccaaaattccctgat 1776
>ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (DDB0204309), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgac 424 |||| ||||||||||||||| ||||||| Sbjct: 341 ccctcatcccatcctttgatgacttgac 314
>ref|XM_483092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cgacgagcaggagcgcggcggcga 639 ||||||| |||||||||||||||| Sbjct: 40 cgacgaggaggagcgcggcggcga 17
>gb|BT017943.1| Zea mays clone EL01N0521C09.c mRNA sequence Length = 1203 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcgacga 642 ||||||||| |||||||||||||| Sbjct: 477 cgagcaggaacgcggcggcgacga 454
>gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete sequence Length = 169680 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ccaatgcacatgcccaaaat 395 |||||||||||||||||||| Sbjct: 91503 ccaatgcacatgcccaaaat 91522
>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence Length = 183048 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ccaatgcacatgcccaaaat 395 |||||||||||||||||||| Sbjct: 43716 ccaatgcacatgcccaaaat 43735
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 acgtcgccggacttcttggc 610 |||||||||||||||||||| Sbjct: 2057448 acgtcgccggacttcttggc 2057467
>ref|XM_426415.1| PREDICTED: Gallus gallus similar to SH3 and multiple ankyrin repeat domains 2 isoform 1; cortactin SH3 domain-binding protein; cortactin binding protein 1; GKAP/SAPAP interacting protein (LOC428858), mRNA Length = 10242 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 aactttaactctgtctcctttgtg 534 |||||| ||||||||||||||||| Sbjct: 3540 aacttttactctgtctcctttgtg 3517
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cgacgagcaggagcgcggcggcga 639 |||||| ||||||||||||||||| Sbjct: 676827 cgacgatcaggagcgcggcggcga 676804
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tagaatgttcatgtctcatt 128 |||||||||||||||||||| Sbjct: 55959 tagaatgttcatgtctcatt 55978
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagcttcctcttctcacca 378 |||||||||||||||||||| Sbjct: 60910 tcagcttcctcttctcacca 60891
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 594 tcgccggacttcttggcggaggcg 617 ||||||||||||||| |||||||| Sbjct: 506562 tcgccggacttcttgtcggaggcg 506539
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 agcaggagcgcggcggcgac 640 |||||||||||||||||||| Sbjct: 161992 agcaggagcgcggcggcgac 161973
>gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosome 18, complete sequence Length = 167998 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagcttcctcttctcacca 378 |||||||||||||||||||| Sbjct: 16939 tcagcttcctcttctcacca 16958
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagcttcctcttctcacca 378 |||||||||||||||||||| Sbjct: 45752 tcagcttcctcttctcacca 45771
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tagaatgttcatgtctcatt 128 |||||||||||||||||||| Sbjct: 94431 tagaatgttcatgtctcatt 94450
>gb|AY281354.1| Uncultured Acidobacteria bacterium clone 38c7 genomic sequence Length = 39263 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 614 ggcgacgagcaggagcgcggcggc 637 |||||||||||||||| ||||||| Sbjct: 29046 ggcgacgagcaggagcacggcggc 29023
>emb|CR682331.2|CNS0FPFR Tetraodon nigroviridis full-length cDNA Length = 805 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcga 639 |||||||||||||||||||| Sbjct: 277 gagcaggagcgcggcggcga 258
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 628 gcgcggcggcgacgaccagcaggc 651 ||||||||||| |||||||||||| Sbjct: 417207 gcgcggcggcgtcgaccagcaggc 417184
>emb|AL162853.17| Human DNA sequence from clone RP11-363G2 on chromosome 13 Contains a ribosomal protein L7a (RPL7A) pseudogene, a pseudogene similar to part of inositol hexakisphosphate kinase 1 (IHPK1) (KIAA0263), a novel pseudogene, a novel gene and 2 CpG islands, complete sequence Length = 123693 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gctttgaagggatcttcagc 363 |||||||||||||||||||| Sbjct: 24830 gctttgaagggatcttcagc 24849
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctgtgtcgaatatgagagt 296 |||||||||||||||||||| Sbjct: 63599 tctgtgtcgaatatgagagt 63618
>emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a Length = 1028 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcg 638 |||||||||||||||||||| Sbjct: 107 cgagcaggagcgcggcggcg 88
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 gcaggagcgcggcggcgacg 641 |||||||||||||||||||| Sbjct: 41906 gcaggagcgcggcggcgacg 41887
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 gcaggagcgcggcggcgacg 641 |||||||||||||||||||| Sbjct: 286430 gcaggagcgcggcggcgacg 286411
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cgacgagcaggagcgcggcggcga 639 |||||| ||||||||||||||||| Sbjct: 1995910 cgacgatcaggagcgcggcggcga 1995887
>emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in linkage group 11, complete sequence Length = 144678 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 catgcccaaaattccctgat 403 |||||||||||||||||||| Sbjct: 132909 catgcccaaaattccctgat 132890
>gb|AC123021.9| Homo sapiens 12 BAC RP11-255P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104395 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aattacataggataacaaaa 54 |||||||||||||||||||| Sbjct: 102581 aattacataggataacaaaa 102562
>gb|AC090679.5| Homo sapiens 12 BAC RP11-80O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156596 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aattacataggataacaaaa 54 |||||||||||||||||||| Sbjct: 156377 aattacataggataacaaaa 156396
>gb|AE012415.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 323 of 460 of the complete genome Length = 10220 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 gcggcggcgacgaccagcag 649 |||||||||||||||||||| Sbjct: 10154 gcggcggcgacgaccagcag 10135
>ref|NM_029714.1| Mus musculus RIKEN cDNA 1700067C01 gene (1700067C01Rik), mRNA Length = 4456 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tagaatgttcatgtctcatt 128 |||||||||||||||||||| Sbjct: 4134 tagaatgttcatgtctcatt 4153
>ref|NM_133149.2| Drosophila melanogaster CG8051-RA (CG8051), mRNA Length = 2567 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ccaatgcacatgcccaaaat 395 |||||||||||||||||||| Sbjct: 1964 ccaatgcacatgcccaaaat 1945
>gb|AY069861.1| Drosophila melanogaster SD10554 full length cDNA Length = 2548 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ccaatgcacatgcccaaaat 395 |||||||||||||||||||| Sbjct: 1933 ccaatgcacatgcccaaaat 1914
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 gcggcggcgacgaccagcag 649 |||||||||||||||||||| Sbjct: 1373048 gcggcggcgacgaccagcag 1373067
>dbj|AK077059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932441M08 product:hypothetical P-loop containing nucleotide triphosphate hydrolases structure containing protein, full insert sequence Length = 4456 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tagaatgttcatgtctcatt 128 |||||||||||||||||||| Sbjct: 4134 tagaatgttcatgtctcatt 4153
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 cgacgagcaggagcgcggcggcga 639 |||||| ||||||||||||||||| Sbjct: 805733 cgacgatcaggagcgcggcggcga 805756
>gb|AC102411.12| Mus musculus chromosome 18, clone RP24-374D7, complete sequence Length = 171918 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagcttcctcttctcacca 378 |||||||||||||||||||| Sbjct: 99903 tcagcttcctcttctcacca 99922
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cgacgagcaggagcgcggcggcga 639 ||||||| |||||||||||||||| Sbjct: 24245574 cgacgaggaggagcgcggcggcga 24245551
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 ||||||||| ||||| |||||||||||| Sbjct: 8843273 ggcgacgaggaggagtgcggcggcgacg 8843300
>gb|AY088043.1| Arabidopsis thaliana clone 40618 mRNA, complete sequence Length = 659 Score = 40.1 bits (20), Expect = 9.3 Identities = 74/92 (80%) Strand = Plus / Minus Query: 397 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 456 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 358 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 299 Query: 457 ctttcatagctagaatcaaaaactgttccatc 488 || ||| | | |||||||| || |||||||| Sbjct: 298 ctctcaaaaattgaatcaaagacagttccatc 267
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcga 639 |||||||||||||||||||| Sbjct: 3033364 gagcaggagcgcggcggcga 3033345
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaatgttcatgtctcattg 129 |||||||||||||||||||| Sbjct: 127422 agaatgttcatgtctcattg 127441
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 ||||||||| ||||| |||||||||||| Sbjct: 48291 ggcgacgaggaggagtgcggcggcgacg 48318
>emb|AJ518187.1|UBA518187 Unidentified bacterium partial 16S rRNA gene, clone Mul2P1-13 Length = 424 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 653 gagaagaagccccggcttcg 672 |||||||||||||||||||| Sbjct: 384 gagaagaagccccggcttcg 403
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cgacgagcaggagcgcggcggcga 639 ||||||| |||||||||||||||| Sbjct: 111913 cgacgaggaggagcgcggcggcga 111890
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 ||||||||| ||||| |||||||||||| Sbjct: 142352 ggcgacgaggaggagtgcggcggcgacg 142379
>dbj|AK103464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129N01, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 ||||||||| ||||| |||||||||||| Sbjct: 76 ggcgacgaggaggagtgcggcggcgacg 49
>dbj|AK101438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039D20, full insert sequence Length = 1222 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 ||||||||| ||||| |||||||||||| Sbjct: 76 ggcgacgaggaggagtgcggcggcgacg 49
>gb|AY104796.1| Zea mays PCO077238 mRNA sequence Length = 1355 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcgacga 642 ||||||||| |||||||||||||| Sbjct: 637 cgagcaggaacgcggcggcgacga 614
>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete sequence Length = 297969 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ccaatgcacatgcccaaaat 395 |||||||||||||||||||| Sbjct: 246825 ccaatgcacatgcccaaaat 246844
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagcttcctcttctcacca 378 |||||||||||||||||||| Sbjct: 10144 tcagcttcctcttctcacca 10125
>gb|AF067971.1|AF067971 Macaca mulatta beta amyloid precursor protein (APP) gene, promoter region and partial cds Length = 6074 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 gagcaggagcgcggcggcga 639 |||||||||||||||||||| Sbjct: 5846 gagcaggagcgcggcggcga 5827
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 614 ggcgacgagcaggagcgcggcggcgacg 641 |||| |||| |||||||||||||||||| Sbjct: 2882904 ggcggcgaggaggagcgcggcggcgacg 2882877
>gb|BC068345.1| Danio rerio arrestin domain containing 2, mRNA (cDNA clone MGC:85652 IMAGE:6805919), complete cds Length = 2522 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 catgcccaaaattccctgat 403 |||||||||||||||||||| Sbjct: 1639 catgcccaaaattccctgat 1620
>ref|NM_199939.1| Danio rerio arrestin domain containing 2 (arrdc2), mRNA Length = 2687 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 catgcccaaaattccctgat 403 |||||||||||||||||||| Sbjct: 1795 catgcccaaaattccctgat 1776
>dbj|AB029934.1| Triticum aestivum Chi 1 mRNA for chitinase 1, complete cds Length = 979 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 cgagcaggagcgcggcggcg 638 |||||||||||||||||||| Sbjct: 125 cgagcaggagcgcggcggcg 106 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,493,761 Number of Sequences: 3902068 Number of extensions: 5493761 Number of successful extensions: 124855 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123047 Number of HSP's gapped (non-prelim): 1794 length of query: 677 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 654 effective length of database: 17,143,297,704 effective search space: 11211716698416 effective search space used: 11211716698416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)