ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9h17 |
|---|---|
| Clone Library Name | barley_pub |
>YHEB_CHLVI (P56160) Hypothetical 28.2 kDa protein in hemB 3'region| Length = 261 Score = 45.4 bits (106), Expect = 2e-04 Identities = 17/47 (36%), Positives = 31/47 (65%) Frame = -3 Query: 457 DCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNK 317 DCY + L+ASG ++ V+ + P+D +++P++E AGG D+ G + Sbjct: 185 DCYGHMLVASGRAEVAVDKIMSPWDCAAVIPIVEEAGGCCFDYRGRQ 231
>SUHB_THEMA (O33832) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 256 Score = 31.6 bits (70), Expect(2) = 0.21 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = -3 Query: 478 KVPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNK 317 ++ + G A + +G VD V + P+D + + +++ AGG +TD+ G + Sbjct: 170 RIRILGSAALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKE 223 Score = 22.3 bits (46), Expect(2) = 0.21 Identities = 9/30 (30%), Positives = 14/30 (46%) Frame = -2 Query: 674 MGIIDQPILRERWVGVDGKKTTLNGQEISV 585 +G++ P L E +G NG+ I V Sbjct: 108 LGVVHAPALNETLYAEEGSGAFFNGERIRV 137
>IMP3_LYCES (P54928) Inositol monophosphatase 3 (EC 3.1.3.25) (IMPase 3) (IMP| 3) (Inositol-1(or 4)-monophosphatase 3) Length = 268 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = -2 Query: 674 MGIIDQPILRERWVGVDGKKTTLNGQEISVRPCNVLSQAYL 552 +G++ PI+ E + G+DGK LNG+ I V + L +A L Sbjct: 120 VGVVYNPIIDELFTGIDGKGAFLNGKPIKVSSQSELVKALL 160
>SUHB_SALTY (P58537) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 267 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 A +A+G VD E GL+P+DF + ++ AGG ++D+ G Sbjct: 193 AYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTG 232
>SUHB_ECOLI (P0ADG4) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 267 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 A +A+G VD E GL+P+DF + ++ AGG ++D+ G Sbjct: 193 AYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTG 232
>SUHB_ECOL6 (P0ADG5) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 267 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 A +A+G VD E GL+P+DF + ++ AGG ++D+ G Sbjct: 193 AYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTG 232
>SUHB_ECO57 (P0ADG6) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 267 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 A +A+G VD E GL+P+DF + ++ AGG ++D+ G Sbjct: 193 AYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTG 232
>IMPA2_RAT (Q8CIN7) Inositol monophosphatase 2 (EC 3.1.3.25) (IMPase 2) (IMP| 2) (Inositol-1(or 4)-monophosphatase 2) (Myo-inositol monophosphatase A2) Length = 290 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/73 (32%), Positives = 30/73 (41%) Frame = -3 Query: 475 VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNKLHWPVSS 296 V + G A LASG D + GL +D + +I AGG + D G L Sbjct: 203 VRVIGSSTLALCYLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDL---- 258 Query: 295 ESRPTSFNVVAAG 257 S VVAAG Sbjct: 259 ----MSCRVVAAG 267
>IMPA2_MOUSE (Q91UZ5) Inositol monophosphatase 2 (EC 3.1.3.25) (IMPase 2) (IMP| 2) (Inositol-1(or 4)-monophosphatase 2) (Myo-inositol monophosphatase A2) Length = 290 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/73 (32%), Positives = 30/73 (41%) Frame = -3 Query: 475 VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNKLHWPVSS 296 V + G A LASG D + GL +D + +I AGG + D G L Sbjct: 203 VRVIGSSTLALCYLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDL---- 258 Query: 295 ESRPTSFNVVAAG 257 S VVAAG Sbjct: 259 ----MSCRVVAAG 267
>DPNPM_ARATH (Q9M0Y6) Putative PAP-specific phosphatase, mitochondrial precursor| (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) Length = 397 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Frame = -3 Query: 445 YALLASGFVDLVV-----ESGLKPYDFLSLVPVIEGAGGSITDWEGNKLHWPVSSESRPT 281 Y ++ASG + + + +K +D + + AGG +TDWEG++++ R Sbjct: 309 YLMVASGRASVFLLRAKTQRTIKSWDHAVGIICVHEAGGKVTDWEGDEINLEEDQSERRL 368 Query: 280 SFNV--VAAGDSRVHGQ 236 F V + +H Q Sbjct: 369 IFPAGGVVVSNGSLHNQ 385
>SUHB_RHILO (Q98F59) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 266 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = -3 Query: 535 PHLFEGDAEDAFIRVRDKVK----VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLV 368 PHL G + + +R+ + V G A +A+G +D E+GL +D + + Sbjct: 160 PHLGRGHHGNFLVELRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGL 219 Query: 367 PVIEGAGGSITDWEGNK 317 +I AGG ++D +G + Sbjct: 220 LLIREAGGFVSDMDGGQ 236
>SYFB_BDEBA (Q6MMJ1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 813 Score = 31.2 bits (69), Expect = 3.0 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = -2 Query: 668 IIDQPILRERWVGVDGKKTTLNGQEISVRPCN 573 I+D+ + E+++ +DG + LNG E+++R N Sbjct: 282 IVDRAVAGEKFITLDGTEIALNGAELTIRDVN 313
>MATK_KOEPA (Q646P3) Maturase K (Intron maturase)| Length = 512 Score = 31.2 bits (69), Expect = 3.0 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = -3 Query: 190 SCSFKRLQLLFIYPIKLSLYAS------LVGKASCSRCTLYSMMISDFLLCVMNSPYVLR 29 S S KRL L I LS+YA+ +G + LYS MIS+ ++ P+ LR Sbjct: 55 SLSMKRLSTLLYQQIHLSIYANDSNPNQFIGHNN----NLYSQMISEGFAVIVEIPFSLR 110 Query: 28 YSS 20 +S Sbjct: 111 LAS 113
>IMPA2_HUMAN (O14732) Inositol monophosphatase 2 (EC 3.1.3.25) (IMPase 2) (IMP| 2) (Inositol-1(or 4)-monophosphatase 2) (Myo-inositol monophosphatase A2) Length = 288 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 475 VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNKL 314 V + G A LASG D + GL +D + +I AGG + D G L Sbjct: 201 VRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPL 254
>SUHB_XYLFA (Q9PAM0) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 275 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNKLHWPVSSESRPTSFNVVA 263 A +A G D E+G+K +D + + ++ AGG + D++G P + P S +VA Sbjct: 192 AYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADA--PRMDDKGPESCQLVA 249 Query: 262 AGDSRVH 242 H Sbjct: 250 GNIKVAH 256
>SUHB_XYLFT (Q87BG1) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 275 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -3 Query: 442 ALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEGNKLHWPVSSESRPTSFNVVA 263 A +A G D E+G+K +D + + ++ AGG + D++G P + P S ++A Sbjct: 192 AYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADA--PRMDDKGPESCQLIA 249 Query: 262 AGDSRVH 242 H Sbjct: 250 GNIKVAH 256
>SUHB_NEIMB (Q9JZ07) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 261 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 436 LASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 +A+G D E LKP+D + +++ AGG +TD G Sbjct: 195 VATGRFDGFFEFNLKPWDIAAGALIVQEAGGIVTDMSG 232
>SUHB_NEIMA (Q9JU03) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase)| (Inositol-1-phosphatase) (I-1-Pase) Length = 261 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 436 LASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWEG 323 +A+G D E LKP+D + +++ AGG +TD G Sbjct: 195 VATGRFDGFFEFNLKPWDIAAGALIVQEAGGIVTDMSG 232
>NIFE_AZOVI (P08293) Nitrogenase iron-molybdenum cofactor biosynthesis protein| nifE Length = 474 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -1 Query: 654 NLEREMGWGGWEENYLKWTRNICPSLQCAV 565 N ERE G+GG+ + L+ R++C +L+C V Sbjct: 418 NQEREFGYGGY-DRMLELVRHVCITLECPV 446
>IMP1_LYCES (P54926) Inositol monophosphatase 1 (EC 3.1.3.25) (IMPase 1) (IMP| 1) (Inositol-1(or 4)-monophosphatase 1) Length = 273 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = -2 Query: 674 MGIIDQPILRERWVGVDGKKTTLNGQEISVRPCNVLSQAYL 552 +G++ PI+ E + G++GK LNG+ I V + L ++ L Sbjct: 120 VGVVYDPIIDELFTGINGKGAYLNGKPIKVSSQSELVKSLL 160
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 30.0 bits (66), Expect = 6.7 Identities = 26/111 (23%), Positives = 40/111 (36%) Frame = +3 Query: 186 QEPPXXXXXXXXXXXXXCP*TRESPAATTLKLVGRDSEETGQWSLFPSQSVIEPPAPSIT 365 QEPP + P +TT+ +E + PS ++ AP T Sbjct: 431 QEPPSTTISTRSASTETVTTRSQEPPSTTISTWSASTETSTSSQDSPSTTISTKSAP--T 488 Query: 366 GTSERKSYGFNPDSTTRSTKPEARRA*A*QSQPYNGTFTLSRTRMNASSAS 518 GT +S P +T + PE A + + TLS +A + S Sbjct: 489 GTVTTRSQDL-PSTTISTRSPETETETATTKSQGSPSITLSTRSSSAETVS 538
>SPT51_ARATH (Q9STN3) Putative transcription elongation factor SPT5 homolog 1| Length = 1054 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = +3 Query: 483 LSRTRMNASSASPSKRCGLVVYLQVSLRQHIARTDRYFLSI*GSFLPIHPN 635 +S R N++++S + G V Q+ LRQH T RY + GS P+HP+ Sbjct: 751 VSTCRTNSNNSSYMQLIG--VQYQIMLRQHRLDTSRYSM---GSETPMHPS 796
>HAM1_STRA5 (Q8DY93) HAM1 protein homolog| Length = 324 Score = 30.0 bits (66), Expect = 6.7 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Frame = +2 Query: 392 LQSRFHNKIHKTRSQEGISITITAIQWDFHLVSYTNECIFSISLKEMWTRRISTS--KLA 565 +Q FH ++ T EG+ + + + DF L+++ + I + ++R I + K A Sbjct: 37 IQDVFH-RLLSTLKVEGLQLHVVQMTSDFQLLAFLVDMI-----NQEYSRHIKVTQHKGA 90 Query: 566 TAHCKDGQIFLVHLR*FSSHPPQPISLSRLAD 661 +D Q+FLVHL P + SL + D Sbjct: 91 ILVSEDDQLFLVHL------PKEGTSLEKFFD 116
>HAM1_STRA3 (Q8E3V8) HAM1 protein homolog| Length = 324 Score = 30.0 bits (66), Expect = 6.7 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Frame = +2 Query: 392 LQSRFHNKIHKTRSQEGISITITAIQWDFHLVSYTNECIFSISLKEMWTRRISTS--KLA 565 +Q FH ++ T EG+ + + + DF L+++ + I + ++R I + K A Sbjct: 37 IQDVFH-RLLSTLKVEGLQLHVVQMTSDFQLLAFLVDMI-----NQEYSRHIKVTQHKGA 90 Query: 566 TAHCKDGQIFLVHLR*FSSHPPQPISLSRLAD 661 +D Q+FLVHL P + SL + D Sbjct: 91 ILVSEDDQLFLVHL------PKEGTSLEKFFD 116
>YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8 intergenic| region Length = 1658 Score = 29.6 bits (65), Expect = 8.8 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = +3 Query: 324 PSQSVIEPPAPSITGTSERKSYGFNPDSTTRSTKPEARRA*A*QSQPYNGTFTLSRTRMN 503 PS+SV+E PS+ +++ S N D T K + + + + YN + Sbjct: 1571 PSKSVLEEQKPSMELINDKSSPENNNDEETNREKDKTKAKKKSRKRNYNSRRRKRKITEG 1630 Query: 504 ASSASPSKR 530 +S+AS +KR Sbjct: 1631 SSAASNTKR 1639 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,464,542 Number of Sequences: 219361 Number of extensions: 2124460 Number of successful extensions: 5874 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5866 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
