ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags9j04 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 238 bits (607), Expect = 1e-62 Identities = 117/141 (82%), Positives = 122/141 (86%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIK+DLETNKIVDFIKF Sbjct: 116 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKF 175 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D VIKNREKHKG+FETIHVED+ GHQFATR+GNVFTIGKG KPW Sbjct: 176 DVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPW 235 Query: 295 VSLPKGKGIKLTIIEEQRKRD 233 VSLPKGKGIKL+IIEEQRKRD Sbjct: 236 VSLPKGKGIKLSIIEEQRKRD 256
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 231 bits (589), Expect = 1e-60 Identities = 111/140 (79%), Positives = 122/140 (87%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DE++KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKF Sbjct: 116 DEESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKF 175 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D VIKNREKHKG+FET+H++D+QGH+FATRLGNVFT+GKGTKPW Sbjct: 176 DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPW 235 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VSLPKGKGIKLTIIE+ RKR Sbjct: 236 VSLPKGKGIKLTIIEDARKR 255
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 230 bits (587), Expect = 2e-60 Identities = 112/140 (80%), Positives = 120/140 (85%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DE++KFKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLETNKI DFIKF Sbjct: 112 DEESKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKF 171 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D VIKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPW Sbjct: 172 DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPW 231 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VSLPKGKGIKLTI+EE +KR Sbjct: 232 VSLPKGKGIKLTILEEAKKR 251
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 227 bits (578), Expect = 3e-59 Identities = 110/140 (78%), Positives = 119/140 (85%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DE+AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKIV+FIKF Sbjct: 116 DEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKF 175 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D VIKNREKHKG+FETIH++D+ GH+FATRLGNV+TIGKGTKPW Sbjct: 176 DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPW 235 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VSLPKGKGIKLTIIEE RKR Sbjct: 236 VSLPKGKGIKLTIIEEARKR 255
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 224 bits (572), Expect = 1e-58 Identities = 111/139 (79%), Positives = 118/139 (84%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 ++ KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFD Sbjct: 117 DETKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VIKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPWV Sbjct: 177 VGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWV 236 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLPK KGIKL+IIEE RKR Sbjct: 237 SLPKRKGIKLSIIEEARKR 255
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 179 bits (455), Expect = 5e-45 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 179 bits (453), Expect = 8e-45 Identities = 85/139 (61%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 179 bits (453), Expect = 8e-45 Identities = 85/139 (61%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 177 bits (449), Expect = 2e-44 Identities = 83/140 (59%), Positives = 104/140 (74%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 +E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DL+T KI DFIKF Sbjct: 115 NEEAKYKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKF 174 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 + VI NREKH G+F+ +HV+D+ G+ FATRL N+F IGKG KPW Sbjct: 175 ETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPW 234 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VSLP+GKG++LTI EE+ KR Sbjct: 235 VSLPRGKGVRLTIAEERDKR 254
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 177 bits (448), Expect = 3e-44 Identities = 85/139 (61%), Positives = 101/139 (72%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR G K IP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 176 bits (446), Expect = 5e-44 Identities = 83/139 (59%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + KGIP+L T+D RTIRYPDPLIK NDT++++LET KI DFIKFD Sbjct: 116 EEAKYKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+ Sbjct: 176 TGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 174 bits (440), Expect = 3e-43 Identities = 80/140 (57%), Positives = 104/140 (74%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 +E+AK+KLCKV+ + G KGIP+L T+D RTIRYPDP+IKANDT+++DLET KI +FIKF Sbjct: 115 NEEAKYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKF 174 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D VI NRE+H G+F+ +HV+D+ G+ FATRL N+F IGKG K W Sbjct: 175 DTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAW 234 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VS+P+GKGI+LTI EE+ KR Sbjct: 235 VSIPRGKGIRLTIAEERDKR 254
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 174 bits (440), Expect = 3e-43 Identities = 80/139 (57%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI++FIKFD Sbjct: 116 EEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+ Sbjct: 176 TGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 172 bits (436), Expect = 8e-43 Identities = 79/139 (56%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD Sbjct: 116 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+ Sbjct: 176 TGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LT+ EE+ KR Sbjct: 236 SLPRGKGIRLTVAEERDKR 254
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 171 bits (434), Expect = 1e-42 Identities = 77/139 (55%), Positives = 103/139 (74%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKV+ Q G KG+P+L T+DGRTIRYPDPLI AND++++D+ + KI D+IKFD Sbjct: 117 EEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 + NRE+H G+F+ +H++D+QGH FATRL NVF IGKG KP++ Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYI 236 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLPKGKG+KL+I EE+ KR Sbjct: 237 SLPKGKGVKLSIAEERDKR 255
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 171 bits (434), Expect = 1e-42 Identities = 78/139 (56%), Positives = 102/139 (73%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD Sbjct: 116 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+ Sbjct: 176 TGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LT+ EE+ KR Sbjct: 236 SLPRGKGIRLTVAEERDKR 254
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 171 bits (433), Expect = 2e-42 Identities = 83/139 (59%), Positives = 100/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD Sbjct: 117 EEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 I +RE H G+FE IHV+DA +FATRL NVF IG+ K W+ Sbjct: 177 TSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWI 236 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLPKGKG+KL+I EE+ +R Sbjct: 237 SLPKGKGVKLSITEERDRR 255
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 170 bits (431), Expect = 3e-42 Identities = 83/139 (59%), Positives = 100/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD Sbjct: 117 EEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 I +RE H G+FE IHV+DA +FATRL NVF IG+ K W+ Sbjct: 177 TSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWI 236 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLPKGKG+KL+I EE+ +R Sbjct: 237 SLPKGKGVKLSITEERDRR 255
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 170 bits (431), Expect = 3e-42 Identities = 83/139 (59%), Positives = 100/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD Sbjct: 117 EEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 I +RE H G+FE IHV+DA +FATRL NVF IG+ K W+ Sbjct: 177 TSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWI 236 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLPKGKG+KL+I EE+ +R Sbjct: 237 SLPKGKGVKLSITEERDRR 255
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 170 bits (430), Expect = 4e-42 Identities = 78/139 (56%), Positives = 101/139 (72%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD Sbjct: 116 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+ Sbjct: 176 TGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LT+ E+ KR Sbjct: 236 SLPRGKGIRLTVAAERDKR 254
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 170 bits (430), Expect = 4e-42 Identities = 78/139 (56%), Positives = 101/139 (72%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD Sbjct: 116 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+ Sbjct: 176 TGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LT+ E+ KR Sbjct: 236 SLPRGKGIRLTVAAERDKR 254
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 169 bits (429), Expect = 5e-42 Identities = 78/139 (56%), Positives = 100/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+IK NDT+++DL + KI FIKFD Sbjct: 116 EEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+ Sbjct: 176 TGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 169 bits (428), Expect = 7e-42 Identities = 79/139 (56%), Positives = 99/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI FIKFD Sbjct: 116 EEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 VI NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+ Sbjct: 176 TGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 168 bits (426), Expect = 1e-41 Identities = 78/139 (56%), Positives = 99/139 (71%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI FIKFD Sbjct: 116 EEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFD 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 V+ NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+ Sbjct: 176 TGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWI 235 Query: 292 SLPKGKGIKLTIIEEQRKR 236 SLP+GKGI+LTI EE+ KR Sbjct: 236 SLPRGKGIRLTIAEERDKR 254
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 159 bits (402), Expect = 7e-39 Identities = 77/140 (55%), Positives = 98/140 (70%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DE+A +KL KV+ VQ G+KGIPYL T+DGRTIRYPDPLIK NDT+K+DL T KI F+KF Sbjct: 116 DEEAAYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKF 175 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 + I +RE+H+G F+ +H++DA +QF TRL NVF IG+G K Sbjct: 176 ENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSL 235 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 +SLPKGKGIKL+I EE+ R Sbjct: 236 ISLPKGKGIKLSIAEERDAR 255
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 155 bits (393), Expect = 8e-38 Identities = 73/140 (52%), Positives = 98/140 (70%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 DE+A +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KI DFIKF Sbjct: 115 DEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKF 174 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 D I ++E+H G F+ +H++D+ + F TRL NVF IG+ KP+ Sbjct: 175 DAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPY 234 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 +SLPKGKGIKL+I EE+ +R Sbjct: 235 ISLPKGKGIKLSIAEERDRR 254
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 153 bits (387), Expect = 4e-37 Identities = 78/140 (55%), Positives = 99/140 (70%), Gaps = 1/140 (0%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+A +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI FIKFD Sbjct: 117 EEAVYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFD 176 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIG-KGTKPW 296 VI +REK +G F+ +H++DA + F TRL NVF IG + KPW Sbjct: 177 TGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPW 236 Query: 295 VSLPKGKGIKLTIIEEQRKR 236 VSLPKGKGIKL+I EE+ +R Sbjct: 237 VSLPKGKGIKLSISEERDRR 256
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 142 bits (357), Expect = 1e-33 Identities = 67/136 (49%), Positives = 92/136 (67%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AKFKL +V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E+ KI FI F+ Sbjct: 116 EEAKFKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFE 175 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWV 293 + +REKH G+F+ +HV D GHQFATRL NVF IGK ++ +V Sbjct: 176 VNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFV 235 Query: 292 SLPKGKGIKLTIIEEQ 245 SLP GKG++ + ++E+ Sbjct: 236 SLPAGKGVRRSRVDER 251
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 138 bits (348), Expect = 1e-32 Identities = 69/138 (50%), Positives = 89/138 (64%) Frame = -2 Query: 649 DAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDX 470 +A FKLCKV+SV+ KG+P L T DGRTIRYPDP +K NDTI ++ T KI D +KF+ Sbjct: 117 EADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEP 176 Query: 469 XXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVS 290 +I +RE+ G + IH++D+ GH FATR+ NVF IGKG K VS Sbjct: 177 GNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVS 236 Query: 289 LPKGKGIKLTIIEEQRKR 236 LP G GI+L+I EE+ KR Sbjct: 237 LPTGAGIRLSIAEERDKR 254
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 133 bits (335), Expect = 4e-31 Identities = 78/147 (53%), Positives = 89/147 (60%), Gaps = 12/147 (8%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI------------KANDTIKLD 512 DEDAKFKLCKVRSVQFGQKGIPYLNTY T Y + ++ D +L Sbjct: 116 DEDAKFKLCKVRSVQFGQKGIPYLNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQELR 175 Query: 511 LETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLG 332 L ++ D + + + KG+FETIHVEDA GHQFATRLG Sbjct: 176 LHQGLMLAMCHGDWRRNTAVWCD---------QQQGEAKGSFETIHVEDALGHQFATRLG 226 Query: 331 NVFTIGKGTKPWVSLPKGKGIKLTIIE 251 NVFTIGKG KPWVSLPKGKGIKL+IIE Sbjct: 227 NVFTIGKGNKPWVSLPKGKGIKLSIIE 253 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = -1 Query: 536 GQRHHQARPGDQQDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 390 G+RH+Q R GDQQ+ LHQ HGD W ++ A WCDQ+QGEA G+ Sbjct: 160 GKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 116 bits (291), Expect = 5e-26 Identities = 56/97 (57%), Positives = 68/97 (70%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 98 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 157 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 362 VI NRE+H G+F+ +HV+DA Sbjct: 158 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 116 bits (291), Expect = 5e-26 Identities = 56/97 (57%), Positives = 68/97 (70%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD Sbjct: 98 EEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFD 157 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 362 VI NRE+H G+F+ +HV+DA Sbjct: 158 TGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4E_METTH (O26123) 30S ribosomal protein S4e| Length = 242 Score = 46.6 bits (109), Expect = 7e-05 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKF 476 +E+A FKLCK+ + + G LN +DGR D + D +KL + +I++ I F Sbjct: 117 EENAGFKLCKIVNKTTIKGGRTQLNLHDGRNY-LSDDEFRVGDVVKLSIPEQEILERIPF 175 Query: 475 DXXXXXXXXXXXXXXXXXVIKNREKHKGTF-ETIHVEDAQGHQFATRLGNVFTIGKGTKP 299 + IK + + T +E G F T VF IGK + Sbjct: 176 EKDSLGLVTGGRHTGEIGKIKKINITRSSMPNTAVIETGAGKTFLTLKDYVFVIGK-DES 234 Query: 298 WVSLPKGK 275 +SLP GK Sbjct: 235 VISLPGGK 242
>RS4E_METKA (Q8TW18) 30S ribosomal protein S4e| Length = 260 Score = 40.8 bits (94), Expect = 0.004 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 15/140 (10%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT--IRYPDP------LIKANDTIKLDL--- 509 +E+A+ K+C++++ + + G + +DG+ + DP + D++ L+L Sbjct: 120 EEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEP 179 Query: 508 ---ETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFE-TIHVEDAQGHQFAT 341 E+ K+VD I F+ + + +G E I VE+ +G QF T Sbjct: 180 DSGESWKVVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQT 239 Query: 340 RLGNVFTIGKGTKPWVSLPK 281 G + IGK +P V++ K Sbjct: 240 TKGRLIAIGK-DEPLVTVRK 258
>RS4E_ARCFU (O28366) 30S ribosomal protein S4e| Length = 235 Score = 37.0 bits (84), Expect = 0.052 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 2/124 (1%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 EDA KL K+ + + G LN +DG I + K D+I L + ++VD +KF+ Sbjct: 111 EDADLKLYKITNKTLVRGGKVQLNLFDGTNILGSND-YKTKDSILLRIPEKEVVDHLKFE 169 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGK--GTKP 299 IK+ + + + + + + T VF +GK KP Sbjct: 170 EGALVMITGGTHAGEIGRIKSYKIVRSSAPNLVTVEGEERDITTIEDYVFVVGKKDSDKP 229 Query: 298 WVSL 287 + L Sbjct: 230 VIDL 233
>RS4E_THEAC (Q56230) 30S ribosomal protein S4e| Length = 235 Score = 36.2 bits (82), Expect = 0.088 Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 1/125 (0%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 473 E A KL KVRS L T+DGRT D K D + + KI + IK Sbjct: 111 ERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQ 170 Query: 472 XXXXXXXXXXXXXXXXXVIKNREKHKG-TFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 I E +G + +H ++ F+T +VF IG + Sbjct: 171 PGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSF 226 Query: 295 VSLPK 281 V P+ Sbjct: 227 VLSPE 231
>RS4E_METJA (P54039) 30S ribosomal protein S4e| Length = 244 Score = 35.8 bits (81), Expect = 0.12 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGR--TIRYPDP------LIKANDTIKLDLETNK 497 E+ KLCK+++ + G LN +DGR I+ DP + K DT+ + + + Sbjct: 116 ENPDVKLCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQE 175 Query: 496 IVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTI 317 I I F+ I E+ + + +E+ G +F T VF + Sbjct: 176 IKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFVV 235 Query: 316 G 314 G Sbjct: 236 G 236
>RS4_CHLS6 (Q40941) 40S ribosomal protein S4| Length = 242 Score = 35.4 bits (80), Expect = 0.15 Identities = 27/117 (23%), Positives = 47/117 (40%) Frame = -2 Query: 637 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXX 458 K+CKV + + T D R ++ IK D++ + ++IV +KF+ Sbjct: 122 KICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLC 181 Query: 457 XXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSL 287 VIK K K + IH+E G + + ++ IG+ +SL Sbjct: 182 LITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 34.7 bits (78), Expect = 0.26 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 8/130 (6%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGR--------TIRYPDPLIKANDTIKLDLETNK 497 E KLCK+ + + G LN +DGR ++ + + K D++ + L Sbjct: 116 EKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQA 175 Query: 496 IVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTI 317 +V ++F+ + EK + + +E+ G +F T VF + Sbjct: 176 VVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFIV 235 Query: 316 GKGTKPWVSL 287 G+ +P +S+ Sbjct: 236 GQ-DEPVISM 244
>RS4E_SULTO (Q975J2) 30S ribosomal protein S4e| Length = 243 Score = 34.3 bits (77), Expect = 0.34 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 8/121 (6%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKAND-----TIKLDLETNKIVD 488 EDAK+K ++ + + G LN DGR I P + + T+K+++ + I+ Sbjct: 112 EDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIK 171 Query: 487 FIKFDXXXXXXXXXXXXXXXXXVIKN---REKHKGTFETIHVEDAQGHQFATRLGNVFTI 317 + VIK + K + + +E G T L NV I Sbjct: 172 SYELSEGKYAIIIGGRNVGLHGVIKTIQYAKYKKRKYSIVTIEQKNGESVQTNLQNVMVI 231 Query: 316 G 314 G Sbjct: 232 G 232
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 33.5 bits (75), Expect = 0.57 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -2 Query: 418 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 278 +K R++H+G ++I+ D GH+F G+VF + KP +S +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 33.1 bits (74), Expect = 0.75 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = +2 Query: 374 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELDGV 529 ++ LK + L+P D H N +VA T H + D+ D+++N V ++ E D + Sbjct: 72 IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127
>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977| Length = 199 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +2 Query: 317 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 406 NG H V + GGKL +G+L D LKGSL +L Sbjct: 36 NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
>RS4E_PYRHO (O59430) 30S ribosomal protein S4e| Length = 243 Score = 31.2 bits (69), Expect = 2.8 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 6/130 (4%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKAND-----TIKLDLETNKIV 491 +E+A K ++R+ + + LN +DG + PL + ++ T+ + + +I+ Sbjct: 117 EEEANIKPLRIRNKRMVKGAKVQLNFHDGTN--HLIPLTEKDNYFTSYTVLMKVPEREIM 174 Query: 490 DFIKFDXXXXXXXXXXXXXXXXXVIKNREKHK-GTFETIHVEDAQGHQFATRLGNVFTIG 314 + + F+ I +K G + + +ED +G F T F +G Sbjct: 175 EVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVG 234 Query: 313 KGTKPWVSLP 284 K KP +SLP Sbjct: 235 K-DKPKISLP 243
>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) Length = 565 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 403 KHKGTFETIHVEDAQGHQFATRLGNV 326 KHKGT+ETI E+ GH+ TR+G V Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
>RS4E_PYRKO (Q5JJG0) 30S ribosomal protein S4e| Length = 243 Score = 30.8 bits (68), Expect = 3.7 Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Frame = -2 Query: 655 DEDAKFKLCKVRSVQFGQKGIPYLNTYDGR----TIRYPDPLIKANDTIKLDLETNKIVD 488 +E+AK K ++ + + + LN +DG ++ D K + T+ + + +IV Sbjct: 117 EEEAKLKPFRINNKRMVKGAKVQLNLHDGSNHLVSLAEKDAY-KTSYTVIMQVPERQIVK 175 Query: 487 FIKFDXXXXXXXXXXXXXXXXXVIKN-REKHKGTFETIHVEDAQGHQFATRLGNVFTIGK 311 + F+ I R+ G + + +ED G F T F IGK Sbjct: 176 VLPFEVGAYVFVTQGKNVARKGKIVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVIGK 235 Query: 310 GTKPWVSLP 284 KP +SLP Sbjct: 236 -DKPEISLP 243
>RS4E_SULAC (O05634) 30S ribosomal protein S4e| Length = 244 Score = 30.4 bits (67), Expect = 4.9 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 11/125 (8%) Frame = -2 Query: 652 EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTI--------RYPDPLIKANDTIKLDLETNK 497 EDAK+K ++ + + G+ LN DGR I +Y P + T+K++L K Sbjct: 112 EDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTL---TTLKIELPEQK 168 Query: 496 IVDFIKFDXXXXXXXXXXXXXXXXXVIKNRE--KHKG-TFETIHVEDAQGHQFATRLGNV 326 I I + K+K + + +E G F T L NV Sbjct: 169 ITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINV 228 Query: 325 FTIGK 311 IG+ Sbjct: 229 MAIGE 233
>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV| Length = 547 Score = 30.0 bits (66), Expect = 6.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 394 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 296 GTF T++VE+ G+ +V G G KPW Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 347 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQV 514 KL LGI VDG+ L + P LD TP + HHD D+++D+ +L V Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,904,446 Number of Sequences: 219361 Number of extensions: 1877701 Number of successful extensions: 5426 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 5182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5388 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
