ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4l10 | 604 | AV910488 | not_full | ref|XM_463993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 | 45 | not_full | CHEB2_XANOR (Q5GYV8) Chemotaxis response regulator protein-glutamate methylesterase 2 (EC 3.1.1.61) Length = 358 | 8 | -- | --- | - | -- | --- | - |
| baak4l09 | 643 | AV910487 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 43 | not_full | LIPB_PROMA (Q7VDH8) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 224 | 2 | -- | --- | - | -- | --- | - |
| baak4l08 | 541 | AV910486 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4l05 | 535 | AV910485 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 268 | -- | --- | - | -- | --- | - |
| baak4l04 | 491 | AV910484 | not_full | ref|XM_475650.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2319 | 58 | not_full | F26L_CHICK (Q91348) 6PF-2-K/Fru-2,6-P2ASE liver isozyme [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] Length = 470 | 89 | -- | --- | - | -- | --- | - |
| baak4l03 | 614 | AV910483 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4l02 | 595 | AV910482 | not_full | gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 | 161 | not_full | S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subunit isoform B Length = 475 | 64 | -- | --- | - | -- | --- | - |
| baak4l01 | 573 | AV910481 | full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 372 | full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 20 | -- | --- | - | -- | --- | - |
| baak4k24 | 417 | AV910480 | not_full | gb|AY103602.1| Zea mays PCO093211 mRNA sequence Length = 1490 | 378 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 256 | -- | --- | - | -- | --- | - |
| baak4k22 | 511 | AV910479 | not_full | dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full insert sequence Length = 1930 | 28 | not_full | YLIF_ECOLI (P75801) Hypothetical membrane protein yliF Length = 442 | 3 | -- | --- | - | -- | --- | - |
| baak4k20 | 657 | AV910478 | not_full | gb|AY107251.1| Zea mays PCO120698 mRNA sequence Length = 1033 | 87 | not_full | EXT2_BOVIN (O77783) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL) (Multiple exostoses protein 2 homolog) Lengt | 91 | -- | --- | - | -- | --- | - |
| baak4k18 | 492 | AV910477 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4k17 | 629 | AV910476 | not_full | ref|XM_472941.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 | 89 | not_full | ADA1A_BOVIN (P18130) Alpha-1A adrenergic receptor (Alpha 1A-adrenoceptor) (Alpha 1A-adrenoreceptor) (Alpha-1C adrenergic receptor) Length = 466 | 4 | -- | --- | - | -- | --- | - |
| baak4k16 | 547 | AV910475 | not_full | gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 | 43 | not_full | ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core protein A1-A) (PEN repeat clone P9) Length = 365 | 9 | -- | --- | - | -- | --- | - |
| baak4k15 | 442 | AV910474 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4k13 | 541 | AV910473 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 27 | not_full | ALG2_MOUSE (Q9DBE8) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-) (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) Length = 415 | 36 | -- | --- | - | -- | --- | - |
| baak4k12 | 297 | AV910472 | not_full | gb|AC114045.5| Rattus norvegicus 20 BAC CH230-187J1 (ChildrenNULLs Hospital Oakland Research Institute) complete sequence Length = 211095 | 22 | not_full | GEF1_SCHPO (Q09763) Rho guanine nucleotide exchange factor gef1 Length = 753 | 4 | -- | --- | - | -- | --- | - |
| baak4k11 | 520 | AV910471 | not_full | emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 | 201 | not_full | PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 | 32 | -- | --- | - | -- | --- | - |
| baak4k10 | 555 | AV910470 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 58 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 53 | -- | --- | - | -- | --- | - |
| baak4k09 | 514 | AV910469 | not_full | dbj|AK067202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D17, full insert sequence Length = 2800 | 28 | not_full | Y531_METJA (Q57951) Hypothetical protein MJ0531 Length = 170 | 126 | -- | --- | - | -- | --- | - |
| baak4k08 | 537 | AV910468 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4k07 | 260 | AV910467 | not_full | emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl-ACP synthase Length = 2380 | 265 | not_full | ADA21_MOUSE (Q9JI76) ADAM 21 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 21) (ADAM 31) Length = 729 | 3 | -- | --- | - | -- | --- | - |
| baak4k06 | 542 | AV910466 | not_full | dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full insert sequence Length = 2059 | 161 | not_full | BGLS_TRIRP (P26204) Non-cyanogenic beta-glucosidase precursor (EC 3.2.1.21) Length = 493 | 68 | -- | --- | - | -- | --- | - |
| baak4k05 | 659 | AV910465 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4k04 | 561 | AV910464 | not_full | gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 | 500 | not_full | G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 | 246 | -- | --- | - | -- | --- | - |
| baak4k03 | 448 | AV910463 | not_full | gb|AY107801.1| Zea mays PCO105307 mRNA sequence Length = 1115 | 37 | not_full | YRKF_BACSU (P54433) UPF0033 protein yrkF Length = 185 | 11 | -- | --- | - | -- | --- | - |
| baak4k01 | 479 | AV910462 | not_full | gb|AY077702.1| Triticum aestivum temperature stress-induced lipocalin (Tatil) mRNA, complete cds Length = 856 | 52 | not_full | BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor Length = 177 | 9 | -- | --- | - | -- | --- | - |
| baak4j24 | 392 | AV910461 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 397 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| baak4j23 | 616 | AV910460 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4j22 | 517 | AV910459 | not_full | gb|AY105920.1| Zea mays PCO073266 mRNA sequence Length = 1079 | 39 | not_full | AROK_ARATH (Q9SJ05) Probable shikimate kinase, chloroplast precursor (EC 2.7.1.71) Length = 292 | 27 | -- | --- | - | -- | --- | - |
| baak4j21 | 513 | AV910458 | not_full | emb|Y12595.1|OSGOG2 O.sativa mRNA for Fd-GOGAT, partial, clone OsGog2 Length = 4120 | 155 | not_full | GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 | 31 | -- | --- | - | -- | --- | - |
| baak4j20 | 570 | AV910457 | not_full | gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, complete sequence Length = 222869 | 321 | not_full | ALG1_YEAST (P16661) Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC 2.4.1.142) (GDP-mannose-dolichol diphosphochitobiose mannosyltransferase) (GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase) (Beta-1,4-mannosyltransferase) (Asparagine-linked gl | 4 | -- | --- | - | -- | --- | - |
| baak4j19 | 544 | AV832519 | not_full | dbj|AB063580.1| Hordeum vulgare mRNA for tonoplast ABC transporter IDI7, complete cds Length = 2216 | 47 | not_full | ABCBA_MOUSE (Q9JI39) ATP-binding cassette sub-family B member 10, mitochondrial precursor (ATP-binding cassette transporter 10) (ABC transporter 10 protein) (ABC-mitochondrial erythroid protein) (ABC-me protein) Length = 715 | 172 | -- | --- | - | -- | --- | - |
| baak4j17 | 569 | AV910456 | not_full | ref|NM_189952.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 | 64 | not_full | ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2 Length = 439 | 101 | -- | --- | - | -- | --- | - |
| baak4j16 | 572 | AV910455 | not_full | gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 | 49 | not_full | THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor Length = 287 | 27 | -- | --- | - | -- | --- | - |
| baak4j14 | 266 | AV910454 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 385 | not_full | CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor (Allergen Api g 3) Length = 264 | 83 | -- | --- | - | -- | --- | - |
| baak4j13 | 188 | AV910453 | not_full | gb|BT001352.1| Drosophila melanogaster AT26615 full insert cDNA Length = 1098 | 72 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4j12 | 270 | AV910452 | not_full | ref|XM_466439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 775 | 45 | not_full | NPT2A_SHEEP (O97704) Sodium-dependent phosphate transport protein 2A (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 L | 3 | -- | --- | - | -- | --- | - |
| baak4j10 | 506 | AV910451 | not_full | gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 | 214 | not_full | IAA30_ORYSA (P0C132) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) Length = 277 | 104 | -- | --- | - | -- | --- | - |
| baak4j09 | 471 | AV910450 | not_full | gb|BT009447.1| Triticum aestivum clone wlmk8.pk0015.h6:fis, full insert mRNA sequence Length = 1206 | 33 | not_full | PUR9_STRSU (Q9F1T4) Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] Length = 51 | 108 | -- | --- | - | -- | --- | - |
| baak4j08 | 352 | AV910449 | not_full | emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV90) Length = 660 | 34 | not_full | ELI9_HORVU (P14897) Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP) Length = 172 | 55 | -- | --- | - | -- | --- | - |
| baak4j06 | 596 | AV910448 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 436 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 166 | -- | --- | - | -- | --- | - |
| baak4j05 | 622 | AV910447 | full | dbj|AK059049.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-E01, full insert sequence Length = 430 | 46 | not_full | GLND_CHRVO (Q7NTY6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 856 | 105 | -- | --- | - | -- | --- | - |
| baak4j04 | 577 | AV910446 | not_full | emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV60) Length = 764 | 72 | not_full | ELI6_HORVU (P14896) Low molecular mass early light-inducible protein HV60, chloroplast precursor (ELIP) Length = 167 | 22 | -- | --- | - | -- | --- | - |
| baak4j03 | 609 | AV910445 | not_full | gb|AY106167.1| Zea mays PCO141571 mRNA sequence Length = 641 | 398 | full | RL44_ARATH (O23290) 60S ribosomal protein L44 Length = 104 | 42 | -- | --- | - | -- | --- | - |
| baak4j02 | 557 | AV910444 | full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 372 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 19 | -- | --- | - | -- | --- | - |
| baak4j01 | 583 | AV910443 | not_full | dbj|AK070358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052K14, full insert sequence Length = 563 | 110 | not_full | CJ070_MOUSE (Q91WS0) Protein C10orf70 homolog Length = 108 | 12 | -- | --- | - | -- | --- | - |
| baak4i24 | 557 | AV910442 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4i23 | 523 | AV910441 | not_full | dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 | 83 | not_full | CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6) Length = 492 | 41 | -- | --- | - | -- | --- | - |
| baak4i21 | 519 | AV910440 | not_full | ref|XM_472925.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 | 62 | not_full | YN8H_YEAST (P53729) Hypothetical 48.1 kDa protein in SEC12-SSK2 intergenic region Length = 429 | 1 | -- | --- | - | -- | --- | - |
