No.
Definition
Score (bits)
E Value
1 dbj|AB063580.1| Hordeum vulgare mRNA for tonoplast ABC transport...
735
0.0
2 ref|XM_469804.1| Oryza sativa (japonica cultivar-group), mRNA
573
e-160
3 dbj|AK066049.1| Oryza sativa (japonica cultivar-group) cDNA clon...
573
e-160
4 gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ...
347
2e-92
5 gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge...
313
3e-82
6 gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
214
2e-52
7 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
196
5e-47
8 gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom...
196
5e-47
9 gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome...
196
5e-47
10 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
196
5e-47
11 gb|BT013080.1| Lycopersicon esculentum clone 114337R, mRNA sequence
84
5e-13
12 ref|NM_123266.3| Arabidopsis thaliana ATTAP2; ATPase, coupled to...
80
9e-12
13 gb|AY078410.1| Arabidopsis thaliana transporter associated with ...
80
9e-12
14 dbj|AB016892.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
52
0.002
15 ref|NM_102048.1| Arabidopsis thaliana unknown protein AT1G21990 ...
42
1.9
16 emb|CR855393.22| Zebrafish DNA sequence from clone DKEY-201L21 i...
42
1.9
17 gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complet...
42
1.9
18 emb|AL954323.5| Zebrafish DNA sequence from clone CH211-285C6 in...
42
1.9
19 gb|AF288462.1|AF288462 Chloroflexus aurantiacus AbcB (abcB) gene...
42
1.9
20 gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana...
42
1.9
21 gb|AC069252.4|AC069252 Genomic sequence for Arabidopsis thaliana...
42
1.9
22 emb|BX465187.7| Zebrafish DNA sequence from clone DKEYP-6C7 in l...
42
1.9
23 emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in l...
42
1.9
24 gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome...
40
7.4
25 gb|AF202009.1| Uncultured human oral bacterium A18 16S ribosomal...
40
7.4
26 ref|XM_844861.1| PREDICTED: Canis familiaris similar to splicing...
40
7.4
27 gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete...
40
7.4
28 gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequ...
40
7.4
29 gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome...
40
7.4
30 emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chr...
40
7.4
31 ref|XM_783518.1| PREDICTED: Strongylocentrotus purpuratus hypoth...
40
7.4
32 emb|Z99122.2|BSUB0019 Bacillus subtilis complete genome (section...
40
7.4
33 emb|Z92952.1|BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N...
40
7.4
34 emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g...
40
7.4
35 gb|AF424783.1| Staphylococcus aureus phage phi 13, complete genome
40
7.4
36 emb|BX276081.12| Zebrafish DNA sequence from clone CH211-270G19 ...
40
7.4
37 gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co...
40
7.4
38 gb|AY244781.1| Gemella bergeri 16S ribosomal RNA gene, partial s...
40
7.4
39 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.4
40 dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com...
40
7.4
41 dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic D...
40
7.4
42 gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq...
40
7.4
43 emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on ch...
40
7.4
44 dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone...
40
7.4
45 emb|Y13363.1|GSPY13363 Gemella sp. 16S rRNA gene (strain 1754-94)
40
7.4
46 emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chro...
40
7.4
47 dbj|AB009866.2| Bacteriophage phi PVL proviral DNA, complete seq...
40
7.4
>gb|AY013246.1 | Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
Length = 102433
Score = 347 bits (175), Expect = 2e-92
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76578 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 76637
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76638 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 76697
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76698 actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 76752
Score = 238 bits (120), Expect = 2e-59
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 261 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77561 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 77620
Query: 321 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77621 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 77680
Score = 236 bits (119), Expect = 6e-59
Identities = 161/175 (92%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 86152 caggagatagcattttttgatgtgaccagaacaggggagctcttgagcaggctttctgaa 86211
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 86212 gatactcaaatcataaagaatgctgctacgacaaacctttctgaagcgctgcgtaatctg 86271
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
|||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 86272 actaccacggctattggtcttggcttcatgttctcaacttcatggaagctaacat 86326
Score = 224 bits (113), Expect = 2e-55
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77861 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 77920
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77921 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 77973
Score = 174 bits (88), Expect = 2e-40
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 2 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76394 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 76453
Query: 62 gacttgttcagtcatctcataaaccagg 89
||||||||||||||||||||||||||||
Sbjct: 76454 gacttgttcagtcatctcataaaccagg 76481
Score = 168 bits (85), Expect = 1e-38
Identities = 106/113 (93%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 86719 aggaatcctttggtgccatccgcacggtaagagcctttgctcaggagcctcatgagattt 86778
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
|||||||| | ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 86779 cacgatatagtggaaaagtaaacgagacactgaaactcggtctcaagcaagct 86831
Score = 143 bits (72), Expect = 7e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 261 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
||||| |||||| ||| ||||| |||||||| | || ||||||||||| ||||||||||
Sbjct: 86413 tgttgtcacttgcaatcgttccggtgatatcggctgtcgtgcgtaaattcgggcgttttc 86472
Query: 321 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 86473 ttcgtgagctttcacatcagacacaagctgcggcagctgttgcttcatccatagccgagg 86532
Score = 119 bits (60), Expect = 1e-23
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 2 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
||||||||||||||| | ||||| |||||||| |||||||| ||||||||||| |||||
Sbjct: 85942 gctcttcgggcatgggtgttcaactctgctagcgagagagttgttgctcgactgagacat 86001
Query: 62 gacttgttcagtcatctcataaaccagg 89
||||||||||||||||||||||||||||
Sbjct: 86002 gacttgttcagtcatctcataaaccagg 86029
Score = 107 bits (54), Expect = 4e-20
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78045 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 78098
Score = 83.8 bits (42), Expect = 5e-13
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 86916 aaagtcgttggcctattttccggagggcttaatgctgcatcaaccctgtcggtt 86969
>gb|AF459639.1 | Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
Length = 215241
Score = 313 bits (158), Expect = 3e-82
Identities = 167/170 (98%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189555 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 189614
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 189615 gatacccaaattataaagaatgccgctacaacaaacctttcagaagcactgcgtaatctg 189674
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaagct 255
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 189675 actaccacagctattggtcttggctttatgttttcaacttcatggaagct 189724
Score = 238 bits (120), Expect = 2e-59
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 261 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190069 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 190128
Query: 321 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190129 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 190188
Score = 228 bits (115), Expect = 2e-56
Identities = 160/175 (91%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 202393 caggagatagcattttttgatgtgaccagaacaggggagctcttaagcaggctttctgaa 202452
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
|| |||||||| ||||||||||| || || ||||||||||| ||||| ||||| ||||||
Sbjct: 202453 gacacccaaatcataaagaatgccgctacgacaaacctttcggaagcgctgcgcaatctg 202512
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
|||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 202513 actaccacggctattggtcttggcttcatgttctcaacttcatggaagctaacat 202567
Score = 216 bits (109), Expect = 6e-53
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 190373 aggaatcttttggtgccattcgcacagtaagagcctttgctcaagagcctcatgagattt 190432
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190433 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 190485
Score = 176 bits (89), Expect = 5e-41
Identities = 107/113 (94%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202950 aggaatcctttggtgccatccgcacggtaagagcctttgctcaggagcctcatgagattt 203009
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
|||||||| ||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 203010 cacgatatagcggaaaagtaaatgagacactgaaacttggtctcaagcaagct 203062
Score = 159 bits (80), Expect = 1e-35
Identities = 110/120 (91%)
Strand = Plus / Plus
Query: 261 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
||||| |||||| ||||||||| |||||||| | || ||||||||||| ||||||||||
Sbjct: 202644 tgttgtcacttgcaattgttccggtgatatcggctgtcgtgcgtaaattcgggcgttttc 202703
Query: 321 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 202704 ttcgtgagctttcacatcagacacaagctgcagctgctgttgcttcatccatagctgagg 202763
Score = 159 bits (80), Expect = 1e-35
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 2 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189389 gctctccgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 189448
Query: 62 gacttgttcagtcatctcataaaccagg 89
|||||||||||||||||| |||||||||
Sbjct: 189449 gacttgttcagtcatctcgtaaaccagg 189476
Score = 127 bits (64), Expect = 4e-26
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
||||||||||||||| | |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 202191 gctcttcgggcatgggtgttcaattctgctagcgagagagttgttgctcgactaagacat 202250
Query: 62 gacttgttcagtcatctcataaaccagg 89
||||||||||||||||||||||||||||
Sbjct: 202251 gacttgttcagtcatctcataaaccagg 202278
Score = 107 bits (54), Expect = 4e-20
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190557 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 190610
Score = 87.7 bits (44), Expect = 4e-14
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 493 agttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203140 agttgttggcctattttccggagggcttaatgctgcatcaaccctgtcggtt 203191
>gb|AF503433.1 | Sorghum bicolor BAC 170F8, complete sequence
Length = 142376
Score = 214 bits (108), Expect = 2e-52
Identities = 153/168 (91%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 38512 caggaaatagcgttttttgatgtgactagaacaggagagctcttaagcaggctttctgaa 38571
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||| || || |||||||||||||| ||||| || || ||||| |||||||| |||||
Sbjct: 38572 gatacacagataataaagaatgctgctacaaccaatctatcagaggcactgcgcaatctc 38631
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaag 253
||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 38632 actactacagctattggtcttggttttatgttttcaacttcatggaag 38679
Score = 176 bits (89), Expect = 5e-41
Identities = 110/117 (94%)
Strand = Plus / Plus
Query: 264 tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
|||||||||||||||| ||||| ||||||||||||||||| |||||||| || |||||||
Sbjct: 38903 tggcacttgtaattgtcccagttatatcagttgctgtgcgcaaatttggacgctttcttc 38962
Query: 324 gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 38963 gtgagctttcacatcagacacaagctgctgcagctgtagcttcatccatagctgagg 39019
Score = 129 bits (65), Expect = 1e-26
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 ggctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagaca 60
|||||||||||||||||||||||||||||||||||||||||| || |||||||| || |
Sbjct: 38341 ggctcttcgggcatggctattcaattctgctagtgagagagtagtcgctcgactaaggaa 38400
Query: 61 ggacttgttcagtcatctcataaaccagg 89
||||||||| |||||||||||||||||||
Sbjct: 38401 ggacttgtttagtcatctcataaaccagg 38429
Score = 113 bits (57), Expect = 6e-22
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
||||||| ||||||||||| || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 39210 aggaatcctttggtgccatccgtacagtaagatcctttgctcaggaatctcatgagattt 39269
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
|||| ||||| |||||||| | |||||||| || ||||||||||| ||||||
Sbjct: 39270 cacgctatggtggaaaagttgaggagacacttaaacttggtctcaaacaagct 39322
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtc 540
||||||||||| | |||||||||||||||||||| || |||||| ||||
Sbjct: 39401 aaagttgttggcttgttttctggagggcttaatgcagcgtcaaccttgtc 39450
>gb|AC120509.3 | Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
sequence
Length = 122496
Score = 196 bits (99), Expect = 5e-47
Identities = 150/167 (89%)
Strand = Plus / Minus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
|||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 95491 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 95432
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| |
Sbjct: 95431 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 95372
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
||||| || ||||||||||||| || |||||| |||||||||||||
Sbjct: 95371 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 95325
Score = 137 bits (69), Expect = 4e-29
Identities = 105/117 (89%)
Strand = Plus / Minus
Query: 264 tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 95063 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 95004
Query: 324 gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
|||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 95003 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 94947
Score = 107 bits (54), Expect = 4e-20
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 5 cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 95667 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 95608
Query: 65 ttgttcagtcatct 78
||||| ||||||||
Sbjct: 95607 ttgtttagtcatct 95594
Score = 105 bits (53), Expect = 1e-19
Identities = 98/113 (86%)
Strand = Plus / Minus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
|||||||||||||||||||||||||||||||| | |||||||||||| |||||| | |
Sbjct: 94747 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 94688
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
||||||||| | |||||| | ||||||||||| || |||||||||||||||
Sbjct: 94687 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 94635
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
||||||||||| | |||||||||||||| ||||| |||||||||||
Sbjct: 94560 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 94514
>gb|AY013245.2 | Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial
sequence
Length = 65547
Score = 196 bits (99), Expect = 5e-47
Identities = 150/167 (89%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
|||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 25588 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 25647
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| |
Sbjct: 25648 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 25707
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
||||| || ||||||||||||| || |||||| |||||||||||||
Sbjct: 25708 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 25754
Score = 137 bits (69), Expect = 4e-29
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 264 tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 26016 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 26075
Query: 324 gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
|||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 26076 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 26132
Score = 107 bits (54), Expect = 4e-20
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 5 cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 25412 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 25471
Query: 65 ttgttcagtcatct 78
||||| ||||||||
Sbjct: 25472 ttgtttagtcatct 25485
Score = 105 bits (53), Expect = 1e-19
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
|||||||||||||||||||||||||||||||| | |||||||||||| |||||| | |
Sbjct: 26332 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 26391
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
||||||||| | |||||| | ||||||||||| || |||||||||||||||
Sbjct: 26392 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 26444
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
||||||||||| | |||||||||||||| ||||| |||||||||||
Sbjct: 26519 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 26565
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 196 bits (99), Expect = 5e-47
Identities = 150/167 (89%)
Strand = Plus / Plus
Query: 86 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
|||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 30938122 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 30938181
Query: 146 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| |
Sbjct: 30938182 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 30938241
Query: 206 actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
||||| || ||||||||||||| || |||||| |||||||||||||
Sbjct: 30938242 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 30938288
Score = 137 bits (69), Expect = 4e-29
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 264 tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 30938550 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 30938609
Query: 324 gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
|||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 30938610 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 30938666
Score = 107 bits (54), Expect = 4e-20
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 5 cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 30937946 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 30938005
Query: 65 ttgttcagtcatct 78
||||| ||||||||
Sbjct: 30938006 ttgtttagtcatct 30938019
Score = 105 bits (53), Expect = 1e-19
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 378 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
|||||||||||||||||||||||||||||||| | |||||||||||| |||||| | |
Sbjct: 30938866 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 30938925
Query: 438 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
||||||||| | |||||| | ||||||||||| || |||||||||||||||
Sbjct: 30938926 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 30938978
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 491 aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
||||||||||| | |||||||||||||| ||||| |||||||||||
Sbjct: 30939053 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 30939099
>gb|AF288462.1 |AF288462 Chloroflexus aurantiacus AbcB (abcB) gene, partial cds; AbcA (abcA),
PufB (pufB), PufA (pufA), PufC (pufC), BchGa (bchG), and
BchP (bchP) genes, complete cds; and unknown gene
Length = 8375
Score = 42.1 bits (21), Expect = 1.9
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 395 attcgcacagtaagagcctttgctcagga 423
||||||||||| | |||||||||||||||
Sbjct: 1948 attcgcacagtgaaagcctttgctcagga 1920
>emb|Z92952.1 |BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] genes
Length = 14047
Score = 40.1 bits (20), Expect = 7.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 234 tgttttcaacttcatggaagctga 257
|||||||||||| |||||||||||
Sbjct: 2674 tgttttcaacttaatggaagctga 2697
>dbj|AB009866.2 | Bacteriophage phi PVL proviral DNA, complete sequence
Length = 41401
Score = 40.1 bits (20), Expect = 7.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 339 agacacaagctgcggctgct 358
||||||||||||||||||||
Sbjct: 9200 agacacaagctgcggctgct 9219
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,705,675
Number of Sequences: 3902068
Number of extensions: 4705675
Number of successful extensions: 100259
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99996
Number of HSP's gapped (non-prelim): 261
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)