ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB063580.1| Hordeum vulgare mRNA for tonoplast ABC transport... 735 0.0
2ref|XM_469804.1| Oryza sativa (japonica cultivar-group), mRNA 573 e-160
3dbj|AK066049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 573 e-160
4gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 347 2e-92
5gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 313 3e-82
6gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 214 2e-52
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 196 5e-47
8gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom... 196 5e-47
9gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome... 196 5e-47
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 196 5e-47
11gb|BT013080.1| Lycopersicon esculentum clone 114337R, mRNA sequence 84 5e-13
12ref|NM_123266.3| Arabidopsis thaliana ATTAP2; ATPase, coupled to... 80 9e-12
13gb|AY078410.1| Arabidopsis thaliana transporter associated with ... 80 9e-12
14dbj|AB016892.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
15ref|NM_102048.1| Arabidopsis thaliana unknown protein AT1G21990 ... 42 1.9
16emb|CR855393.22| Zebrafish DNA sequence from clone DKEY-201L21 i... 42 1.9
17gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complet... 42 1.9
18emb|AL954323.5| Zebrafish DNA sequence from clone CH211-285C6 in... 42 1.9
19gb|AF288462.1|AF288462 Chloroflexus aurantiacus AbcB (abcB) gene... 42 1.9
20gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana... 42 1.9
21gb|AC069252.4|AC069252 Genomic sequence for Arabidopsis thaliana... 42 1.9
22emb|BX465187.7| Zebrafish DNA sequence from clone DKEYP-6C7 in l... 42 1.9
23emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in l... 42 1.9
24gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
25gb|AF202009.1| Uncultured human oral bacterium A18 16S ribosomal... 40 7.4
26ref|XM_844861.1| PREDICTED: Canis familiaris similar to splicing... 40 7.4
27gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete... 40 7.4
28gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequ... 40 7.4
29gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome... 40 7.4
30emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chr... 40 7.4
31ref|XM_783518.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.4
32emb|Z99122.2|BSUB0019 Bacillus subtilis complete genome (section... 40 7.4
33emb|Z92952.1|BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N... 40 7.4
34emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 7.4
35gb|AF424783.1| Staphylococcus aureus phage phi 13, complete genome 40 7.4
36emb|BX276081.12| Zebrafish DNA sequence from clone CH211-270G19 ... 40 7.4
37gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 7.4
38gb|AY244781.1| Gemella bergeri 16S ribosomal RNA gene, partial s... 40 7.4
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
40dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 7.4
41dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
42gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq... 40 7.4
43emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on ch... 40 7.4
44dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.4
45emb|Y13363.1|GSPY13363 Gemella sp. 16S rRNA gene (strain 1754-94) 40 7.4
46emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chro... 40 7.4
47dbj|AB009866.2| Bacteriophage phi PVL proviral DNA, complete seq... 40 7.4

>dbj|AB063580.1| Hordeum vulgare mRNA for tonoplast ABC transporter IDI7, complete
           cds
          Length = 2216

 Score =  735 bits (371), Expect = 0.0
 Identities = 500/543 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
           ||||||||||||||| | ||||| |||||||| |||||||| ||||||||||| ||||| 
Sbjct: 424 gctcttcgggcatgggtgttcaactctgctagcgagagagttgttgctcgactgagacat 483

                                                                       
Query: 62  gacttgttcagtcatctcataaaccaggaaatagcattttttgacgtgactagaacagga 121
           ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 484 gacttgttcagtcatctcataaaccaggagatagcattttttgatgtgaccagaacaggg 543

                                                                       
Query: 122 gagctcttaagcaggctttctgaagatacccaaattataaagaatgctgcaacaacaaac 181
           |||||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 544 gagctcttgagcaggctttctgaagatactcaaatcataaagaatgctgctacgacaaac 603

                                                                       
Query: 182 ctttcagaagcactgcgtaatctgactaccacagctattggtcttggcttcatgttttca 241
           ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 604 ctttctgaagcgctgcgtaatctgactaccacggctattggtcttggcttcatgttctca 663

                                                                       
Query: 242 acttcatggaagctgacattgttggcacttgtaattgttccagtgatatcagttgctgtg 301
           |||||||||||||| ||||||||| |||||| ||| ||||| |||||||| | ||  |||
Sbjct: 664 acttcatggaagctaacattgttgtcacttgcaatcgttccggtgatatcggctgtcgtg 723

                                                                       
Query: 302 cgtaaatttgggcgttttcttcgtgagctttcacatcagacacaagctgcggctgctgta 361
           |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 724 cgtaaattcgggcgttttcttcgtgagctttcacatcagacacaagctgcggcagctgtt 783

                                                                       
Query: 362 gcttcatccatagctgaggaatcttttggtgccattcgcacagtaagagcctttgctcag 421
           |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 784 gcttcatccatagccgaggaatcctttggtgccatccgcacggtaagagcctttgctcag 843

                                                                       
Query: 422 gagcctcatgagatttcacgatatggcggaaaagtaaacgagacactgaagcttggtctc 481
           |||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||
Sbjct: 844 gagcctcatgagatttcacgatatagtggaaaagtaaacgagacactgaaactcggtctc 903

                                                                       
Query: 482 aagcaagctaaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcg 541
           |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 904 aagcaagctaaagtcgttggcctattttccggagggcttaatgctgcatcaaccctgtcg 963

              
Query: 542 gtt 544
           |||
Sbjct: 964 gtt 966



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>ref|XM_469804.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2288

 Score =  573 bits (289), Expect = e-160
 Identities = 472/533 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
           |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 434 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 493

                                                                       
Query: 65  ttgttcagtcatctcataaaccaggaaatagcattttttgacgtgactagaacaggagag 124
           ||||| ||||||||  |||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 494 ttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagag 553

                                                                       
Query: 125 ctcttaagcaggctttctgaagatacccaaattataaagaatgctgcaacaacaaacctt 184
           || ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 554 ctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctt 613

                                                                       
Query: 185 tcagaagcactgcgtaatctgactaccacagctattggtcttggcttcatgttttcaact 244
           ||||||||| |||| ||| | ||||| ||  ||||||||||||| || |||||| |||||
Sbjct: 614 tcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaact 673

                                                                       
Query: 245 tcatggaagctgacattgttggcacttgtaattgttccagtgatatcagttgctgtgcgt 304
           ||||||||  | |||||| ||||||||||||||||||| || |||||| |||||||||| 
Sbjct: 674 tcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgc 733

                                                                       
Query: 305 aaatttgggcgttttcttcgtgagctttcacatcagacacaagctgcggctgctgtagct 364
           |||||||| || ||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 734 aaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgct 793

                                                                       
Query: 365 tcatccatagctgaggaatcttttggtgccattcgcacagtaagagcctttgctcaggag 424
           ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 794 tcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggag 853

                                                                       
Query: 425 cctcatgagatttcacgatatggcggaaaagtaaacgagacactgaagcttggtctcaag 484
             ||||||  | | ||||||||| |  |||||| | ||||||||||| || |||||||||
Sbjct: 854 agtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaag 913

                                                                
Query: 485 caagctaaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
           |||||||||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 914 caagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 966



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>dbj|AK066049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049O12, full
            insert sequence
          Length = 2346

 Score =  573 bits (289), Expect = e-160
 Identities = 472/533 (88%)
 Strand = Plus / Plus

                                                                        
Query: 5    cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
            |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 488  cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 547

                                                                        
Query: 65   ttgttcagtcatctcataaaccaggaaatagcattttttgacgtgactagaacaggagag 124
            ||||| ||||||||  |||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 548  ttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagag 607

                                                                        
Query: 125  ctcttaagcaggctttctgaagatacccaaattataaagaatgctgcaacaacaaacctt 184
            || ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 608  ctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctt 667

                                                                        
Query: 185  tcagaagcactgcgtaatctgactaccacagctattggtcttggcttcatgttttcaact 244
            ||||||||| |||| ||| | ||||| ||  ||||||||||||| || |||||| |||||
Sbjct: 668  tcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaact 727

                                                                        
Query: 245  tcatggaagctgacattgttggcacttgtaattgttccagtgatatcagttgctgtgcgt 304
            ||||||||  | |||||| ||||||||||||||||||| || |||||| |||||||||| 
Sbjct: 728  tcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgc 787

                                                                        
Query: 305  aaatttgggcgttttcttcgtgagctttcacatcagacacaagctgcggctgctgtagct 364
            |||||||| || ||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 788  aaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgct 847

                                                                        
Query: 365  tcatccatagctgaggaatcttttggtgccattcgcacagtaagagcctttgctcaggag 424
            ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 848  tcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggag 907

                                                                        
Query: 425  cctcatgagatttcacgatatggcggaaaagtaaacgagacactgaagcttggtctcaag 484
              ||||||  | | ||||||||| |  |||||| | ||||||||||| || |||||||||
Sbjct: 908  agtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaag 967

                                                                 
Query: 485  caagctaaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
            |||||||||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 968  caagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 1020



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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score =  347 bits (175), Expect = 2e-92
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                         
Query: 86    caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76578 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 76637

                                                                         
Query: 146   gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76638 gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 76697

                                                                    
Query: 206   actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76698 actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 76752



 Score =  238 bits (120), Expect = 2e-59
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                         
Query: 261   tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77561 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 77620

                                                                         
Query: 321   ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77621 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 77680



 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Plus

                                                                         
Query: 86    caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
             ||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 86152 caggagatagcattttttgatgtgaccagaacaggggagctcttgagcaggctttctgaa 86211

                                                                         
Query: 146   gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
             ||||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 86212 gatactcaaatcataaagaatgctgctacgacaaacctttctgaagcgctgcgtaatctg 86271

                                                                    
Query: 206   actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
             |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 86272 actaccacggctattggtcttggcttcatgttctcaacttcatggaagctaacat 86326



 Score =  224 bits (113), Expect = 2e-55
 Identities = 113/113 (100%)
 Strand = Plus / Plus

                                                                         
Query: 378   aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77861 aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 77920

                                                                  
Query: 438   cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
             |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77921 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 77973



 Score =  174 bits (88), Expect = 2e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                         
Query: 2     gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76394 gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 76453

                                         
Query: 62    gacttgttcagtcatctcataaaccagg 89
             ||||||||||||||||||||||||||||
Sbjct: 76454 gacttgttcagtcatctcataaaccagg 76481



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                         
Query: 378   aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
             ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 86719 aggaatcctttggtgccatccgcacggtaagagcctttgctcaggagcctcatgagattt 86778

                                                                  
Query: 438   cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
             |||||||| | ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 86779 cacgatatagtggaaaagtaaacgagacactgaaactcggtctcaagcaagct 86831



 Score =  143 bits (72), Expect = 7e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                         
Query: 261   tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
             ||||| |||||| ||| ||||| |||||||| | ||  ||||||||||| ||||||||||
Sbjct: 86413 tgttgtcacttgcaatcgttccggtgatatcggctgtcgtgcgtaaattcgggcgttttc 86472

                                                                         
Query: 321   ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
             |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 86473 ttcgtgagctttcacatcagacacaagctgcggcagctgttgcttcatccatagccgagg 86532



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                         
Query: 2     gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
             ||||||||||||||| | ||||| |||||||| |||||||| ||||||||||| ||||| 
Sbjct: 85942 gctcttcgggcatgggtgttcaactctgctagcgagagagttgttgctcgactgagacat 86001

                                         
Query: 62    gacttgttcagtcatctcataaaccagg 89
             ||||||||||||||||||||||||||||
Sbjct: 86002 gacttgttcagtcatctcataaaccagg 86029



 Score =  107 bits (54), Expect = 4e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                   
Query: 491   aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78045 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 78098



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                   
Query: 491   aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
             ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 86916 aaagtcgttggcctattttccggagggcttaatgctgcatcaaccctgtcggtt 86969



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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score =  313 bits (158), Expect = 3e-82
 Identities = 167/170 (98%)
 Strand = Plus / Plus

                                                                          
Query: 86     caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189555 caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 189614

                                                                          
Query: 146    gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
              ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 189615 gatacccaaattataaagaatgccgctacaacaaacctttcagaagcactgcgtaatctg 189674

                                                                
Query: 206    actaccacagctattggtcttggcttcatgttttcaacttcatggaagct 255
              |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 189675 actaccacagctattggtcttggctttatgttttcaacttcatggaagct 189724



 Score =  238 bits (120), Expect = 2e-59
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                          
Query: 261    tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190069 tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 190128

                                                                          
Query: 321    ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190129 ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 190188



 Score =  228 bits (115), Expect = 2e-56
 Identities = 160/175 (91%)
 Strand = Plus / Plus

                                                                          
Query: 86     caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
              ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 202393 caggagatagcattttttgatgtgaccagaacaggggagctcttaagcaggctttctgaa 202452

                                                                          
Query: 146    gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
              || |||||||| ||||||||||| || || ||||||||||| ||||| ||||| ||||||
Sbjct: 202453 gacacccaaatcataaagaatgccgctacgacaaacctttcggaagcgctgcgcaatctg 202512

                                                                     
Query: 206    actaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacat 260
              |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 202513 actaccacggctattggtcttggcttcatgttctcaacttcatggaagctaacat 202567



 Score =  216 bits (109), Expect = 6e-53
 Identities = 112/113 (99%)
 Strand = Plus / Plus

                                                                          
Query: 378    aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 190373 aggaatcttttggtgccattcgcacagtaagagcctttgctcaagagcctcatgagattt 190432

                                                                   
Query: 438    cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
              |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190433 cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 190485



 Score =  176 bits (89), Expect = 5e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                          
Query: 378    aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
              ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202950 aggaatcctttggtgccatccgcacggtaagagcctttgctcaggagcctcatgagattt 203009

                                                                   
Query: 438    cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
              |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 203010 cacgatatagcggaaaagtaaatgagacactgaaacttggtctcaagcaagct 203062



 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                          
Query: 261    tgttggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttc 320
              ||||| |||||| ||||||||| |||||||| | ||  ||||||||||| ||||||||||
Sbjct: 202644 tgttgtcacttgcaattgttccggtgatatcggctgtcgtgcgtaaattcgggcgttttc 202703

                                                                          
Query: 321    ttcgtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
              ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 202704 ttcgtgagctttcacatcagacacaagctgcagctgctgttgcttcatccatagctgagg 202763



 Score =  159 bits (80), Expect = 1e-35
 Identities = 86/88 (97%)
 Strand = Plus / Plus

                                                                          
Query: 2      gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189389 gctctccgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 189448

                                          
Query: 62     gacttgttcagtcatctcataaaccagg 89
              |||||||||||||||||| |||||||||
Sbjct: 189449 gacttgttcagtcatctcgtaaaccagg 189476



 Score =  127 bits (64), Expect = 4e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                          
Query: 2      gctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacag 61
              ||||||||||||||| | |||||||||||||| |||||||| ||||||||||| ||||| 
Sbjct: 202191 gctcttcgggcatgggtgttcaattctgctagcgagagagttgttgctcgactaagacat 202250

                                          
Query: 62     gacttgttcagtcatctcataaaccagg 89
              ||||||||||||||||||||||||||||
Sbjct: 202251 gacttgttcagtcatctcataaaccagg 202278



 Score =  107 bits (54), Expect = 4e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                    
Query: 491    aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190557 aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 190610



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 493    agttgttggactattttctggagggcttaatgctgcatcaaccctgtcggtt 544
              ||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203140 agttgttggcctattttccggagggcttaatgctgcatcaaccctgtcggtt 203191



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>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score =  214 bits (108), Expect = 2e-52
 Identities = 153/168 (91%)
 Strand = Plus / Plus

                                                                         
Query: 86    caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
             ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 38512 caggaaatagcgttttttgatgtgactagaacaggagagctcttaagcaggctttctgaa 38571

                                                                         
Query: 146   gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
             ||||| || || |||||||||||||| ||||| || || ||||| |||||||| ||||| 
Sbjct: 38572 gatacacagataataaagaatgctgctacaaccaatctatcagaggcactgcgcaatctc 38631

                                                             
Query: 206   actaccacagctattggtcttggcttcatgttttcaacttcatggaag 253
             ||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 38632 actactacagctattggtcttggttttatgttttcaacttcatggaag 38679



 Score =  176 bits (89), Expect = 5e-41
 Identities = 110/117 (94%)
 Strand = Plus / Plus

                                                                         
Query: 264   tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
             |||||||||||||||| ||||| ||||||||||||||||| |||||||| || |||||||
Sbjct: 38903 tggcacttgtaattgtcccagttatatcagttgctgtgcgcaaatttggacgctttcttc 38962

                                                                      
Query: 324   gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
             |||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 38963 gtgagctttcacatcagacacaagctgctgcagctgtagcttcatccatagctgagg 39019



 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggctcttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagaca 60
             |||||||||||||||||||||||||||||||||||||||||| || |||||||| ||  |
Sbjct: 38341 ggctcttcgggcatggctattcaattctgctagtgagagagtagtcgctcgactaaggaa 38400

                                          
Query: 61    ggacttgttcagtcatctcataaaccagg 89
             ||||||||| |||||||||||||||||||
Sbjct: 38401 ggacttgtttagtcatctcataaaccagg 38429



 Score =  113 bits (57), Expect = 6e-22
 Identities = 99/113 (87%)
 Strand = Plus / Plus

                                                                         
Query: 378   aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
             ||||||| ||||||||||| || ||||||||| |||||||||||||  ||||||||||||
Sbjct: 39210 aggaatcctttggtgccatccgtacagtaagatcctttgctcaggaatctcatgagattt 39269

                                                                  
Query: 438   cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
             |||| ||||| ||||||||  | |||||||| || ||||||||||| ||||||
Sbjct: 39270 cacgctatggtggaaaagttgaggagacacttaaacttggtctcaaacaagct 39322



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 491   aaagttgttggactattttctggagggcttaatgctgcatcaaccctgtc 540
             |||||||||||  | |||||||||||||||||||| || |||||| ||||
Sbjct: 39401 aaagttgttggcttgttttctggagggcttaatgcagcgtcaaccttgtc 39450



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Plus

                                                                            
Query: 86       caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
                |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 30847599 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 30847658

                                                                            
Query: 146      gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
                ||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | 
Sbjct: 30847659 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 30847718

                                                               
Query: 206      actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
                ||||| ||  ||||||||||||| || |||||| |||||||||||||
Sbjct: 30847719 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 30847765



 Score =  137 bits (69), Expect = 4e-29
 Identities = 105/117 (89%)
 Strand = Plus / Plus

                                                                            
Query: 264      tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
                ||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 30848027 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 30848086

                                                                         
Query: 324      gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
                |||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 30848087 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 30848143



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 5        cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
                |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 30847423 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 30847482

                              
Query: 65       ttgttcagtcatct 78
                ||||| ||||||||
Sbjct: 30847483 ttgtttagtcatct 30847496



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                            
Query: 378      aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
                |||||||||||||||||||||||||||||||| | ||||||||||||  ||||||  | |
Sbjct: 30848343 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 30848402

                                                                     
Query: 438      cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
                 ||||||||| |  |||||| | ||||||||||| || |||||||||||||||
Sbjct: 30848403 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 30848455



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 491      aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
                |||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 30848530 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 30848576



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>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
             sequence
          Length = 122496

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Minus

                                                                         
Query: 86    caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
             |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 95491 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 95432

                                                                         
Query: 146   gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
             ||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | 
Sbjct: 95431 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 95372

                                                            
Query: 206   actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
             ||||| ||  ||||||||||||| || |||||| |||||||||||||
Sbjct: 95371 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 95325



 Score =  137 bits (69), Expect = 4e-29
 Identities = 105/117 (89%)
 Strand = Plus / Minus

                                                                         
Query: 264   tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
             ||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 95063 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 95004

                                                                      
Query: 324   gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
             |||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 95003 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 94947



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                         
Query: 5     cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
             |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 95667 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 95608

                           
Query: 65    ttgttcagtcatct 78
             ||||| ||||||||
Sbjct: 95607 ttgtttagtcatct 95594



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                         
Query: 378   aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
             |||||||||||||||||||||||||||||||| | ||||||||||||  ||||||  | |
Sbjct: 94747 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 94688

                                                                  
Query: 438   cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
              ||||||||| |  |||||| | ||||||||||| || |||||||||||||||
Sbjct: 94687 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 94635



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 491   aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
             |||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 94560 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 94514



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>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial
             sequence
          Length = 65547

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Plus

                                                                         
Query: 86    caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
             |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 25588 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 25647

                                                                         
Query: 146   gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
             ||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | 
Sbjct: 25648 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 25707

                                                            
Query: 206   actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
             ||||| ||  ||||||||||||| || |||||| |||||||||||||
Sbjct: 25708 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 25754



 Score =  137 bits (69), Expect = 4e-29
 Identities = 105/117 (89%)
 Strand = Plus / Plus

                                                                         
Query: 264   tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
             ||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 26016 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 26075

                                                                      
Query: 324   gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
             |||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 26076 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 26132



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                         
Query: 5     cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
             |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 25412 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 25471

                           
Query: 65    ttgttcagtcatct 78
             ||||| ||||||||
Sbjct: 25472 ttgtttagtcatct 25485



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                         
Query: 378   aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
             |||||||||||||||||||||||||||||||| | ||||||||||||  ||||||  | |
Sbjct: 26332 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 26391

                                                                  
Query: 438   cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
              ||||||||| |  |||||| | ||||||||||| || |||||||||||||||
Sbjct: 26392 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 26444



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 491   aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
             |||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 26519 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 26565



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Plus

                                                                            
Query: 86       caggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctgaa 145
                |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 30938122 caggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaa 30938181

                                                                            
Query: 146      gatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatctg 205
                ||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | 
Sbjct: 30938182 gatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatatt 30938241

                                                               
Query: 206      actaccacagctattggtcttggcttcatgttttcaacttcatggaa 252
                ||||| ||  ||||||||||||| || |||||| |||||||||||||
Sbjct: 30938242 actactacgtctattggtcttggttttatgtttgcaacttcatggaa 30938288



 Score =  137 bits (69), Expect = 4e-29
 Identities = 105/117 (89%)
 Strand = Plus / Plus

                                                                            
Query: 264      tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
                ||||||||||||||||||| || |||||| |||||||||| |||||||| || |||||||
Sbjct: 30938550 tggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttc 30938609

                                                                         
Query: 324      gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgagg 380
                |||| ||||||||||||||||| || || |||||||| |||||||||||||| ||||
Sbjct: 30938610 gtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgagg 30938666



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 5        cttcgggcatggctattcaattctgctagtgagagagtcgttgctcgacttagacaggac 64
                |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||
Sbjct: 30937946 cttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggac 30938005

                              
Query: 65       ttgttcagtcatct 78
                ||||| ||||||||
Sbjct: 30938006 ttgtttagtcatct 30938019



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                            
Query: 378      aggaatcttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagattt 437
                |||||||||||||||||||||||||||||||| | ||||||||||||  ||||||  | |
Sbjct: 30938866 aggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtct 30938925

                                                                     
Query: 438      cacgatatggcggaaaagtaaacgagacactgaagcttggtctcaagcaagct 490
                 ||||||||| |  |||||| | ||||||||||| || |||||||||||||||
Sbjct: 30938926 tacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagct 30938978



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 491      aaagttgttggactattttctggagggcttaatgctgcatcaaccct 537
                |||||||||||  | |||||||||||||| ||||| |||||||||||
Sbjct: 30939053 aaagttgttggcatgttttctggagggctcaatgcagcatcaaccct 30939099



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>gb|BT013080.1| Lycopersicon esculentum clone 114337R, mRNA sequence
          Length = 2182

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 279/358 (77%)
 Strand = Plus / Plus

                                                                       
Query: 84  accaggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctg 143
           ||||||| ||||| || || || || ||| |||| || |||||| | || ||||| ||||
Sbjct: 560 accaggagatagctttcttcgatgttactcgaactggggagctcctcagtaggctatctg 619

                                                                       
Query: 144 aagatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaatc 203
           |||||||||| || ||||||||||| ||||| || || |||||||| ||  || | ||||
Sbjct: 620 aagatacccagatcataaagaatgccgcaactactaatctttcagaggctttgaggaatc 679

                                                                       
Query: 204 tgactaccacagctattggtcttggcttcatgttttcaacttcatggaagctgacattgt 263
           |  ||||  ||  |||||||||||| || ||||||  ||| ||||||||  | |||||||
Sbjct: 680 ttgctactgcatttattggtcttggatttatgtttcaaacatcatggaaattaacattgt 739

                                                                       
Query: 264 tggcacttgtaattgttccagtgatatcagttgctgtgcgtaaatttgggcgttttcttc 323
           || | || |   |||| ||||| ||||||||||| || || | |||||| || |   | |
Sbjct: 740 tgtcgctagctgttgtaccagtcatatcagttgcagtacgcagatttggtcgctacatgc 799

                                                                       
Query: 324 gtgagctttcacatcagacacaagctgcggctgctgtagcttcatccatagctgaggaat 383
           |||||||||| ||  | || |||||||| || || ||||| || ||||| ||||||||| 
Sbjct: 800 gtgagctttcccacaaaactcaagctgctgcagcagtagcctcgtccattgctgaggaaa 859

                                                                     
Query: 384 cttttggtgccattcgcacagtaagagcctttgctcaggagcctcatgagatttcacg 441
           ||||||| ||||| || ||||| ||| | ||||| |||||   | |||||||||||||
Sbjct: 860 cttttggcgccatacggacagtgagatcatttgcgcaggaagattatgagatttcacg 917



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>ref|NM_123266.3| Arabidopsis thaliana ATTAP2; ATPase, coupled to transmembrane
           movement of substances AT5G39040 (ATTAP2) mRNA, complete
           cds
          Length = 2116

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 151/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 14  tggctattcaattctgctagtgagagagtcgttgctcgacttagacaggacttgttcagt 73
           |||||||| |||||||| ||||| ||||| || |||||||| ||| |||| |||||||| 
Sbjct: 415 tggctatttaattctgccagtgaaagagttgtggctcgactgagaaaggatttgttcaga 474

                                                                       
Query: 74  catctcataaaccaggaaatagcattttttgacgtgactagaacaggagagctcttaagc 133
           || || ||  | |||||||||||||||| ||| || || | ||| ||||| |||||||| 
Sbjct: 475 cacctaatgcatcaggaaatagcattttatgatgtcacaaaaaccggagaactcttaagt 534

                                                                       
Query: 134 aggctttctgaagatacccaaattataaagaatgctgcaacaacaaacctttcagaagca 193
           ||  | || ||||| ||||| || ||||| || ||||| || ||||| ||||| ||||| 
Sbjct: 535 agattatccgaagacacccagatcataaaaaacgctgctactacaaatctttctgaagct 594

                   
Query: 194 ctgcgtaa 201
           || |||||
Sbjct: 595 cttcgtaa 602



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 344 caagctgcggctgctgtagcttcatccatagctgaggaatcttttggtgc 393
           |||||||| |||||||| ||| |||| || ||||||||||||||||||||
Sbjct: 745 caagctgcagctgctgttgctgcatcaattgctgaggaatcttttggtgc 794



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>gb|AY078410.1| Arabidopsis thaliana transporter associated with antigen
           processing-like protein (TAP2) mRNA, complete cds
          Length = 1935

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 151/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 14  tggctattcaattctgctagtgagagagtcgttgctcgacttagacaggacttgttcagt 73
           |||||||| |||||||| ||||| ||||| || |||||||| ||| |||| |||||||| 
Sbjct: 415 tggctatttaattctgccagtgaaagagttgtggctcgactgagaaaggatttgttcaga 474

                                                                       
Query: 74  catctcataaaccaggaaatagcattttttgacgtgactagaacaggagagctcttaagc 133
           || || ||  | |||||||||||||||| ||| || || | ||| ||||| |||||||| 
Sbjct: 475 cacctaatgcatcaggaaatagcattttatgatgtcacaaaaaccggagaactcttaagt 534

                                                                       
Query: 134 aggctttctgaagatacccaaattataaagaatgctgcaacaacaaacctttcagaagca 193
           ||  | || ||||| ||||| || ||||| || ||||| || ||||| ||||| ||||| 
Sbjct: 535 agattatccgaagacacccagatcataaaaaacgctgctactacaaatctttctgaagct 594

                   
Query: 194 ctgcgtaa 201
           || |||||
Sbjct: 595 cttcgtaa 602



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 344 caagctgcggctgctgtagcttcatccatagctgaggaatcttttggtgc 393
           |||||||| |||||||| ||| |||| || ||||||||||||||||||||
Sbjct: 745 caagctgcagctgctgttgctgcatcaattgctgaggaatcttttggtgc 794



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>dbj|AB016892.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXF12
          Length = 66237

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Plus

                                                                         
Query: 84    accaggaaatagcattttttgacgtgactagaacaggagagctcttaagcaggctttctg 143
             |||||||||||||||||| ||| || || | ||| ||||| |||||||| ||  | || |
Sbjct: 17798 accaggaaatagcattttatgatgtcacaaaaaccggagaactcttaagtagattatccg 17857

                                                                       
Query: 144   aagatacccaaattataaagaatgctgcaacaacaaacctttcagaagcactgcgtaa 201
             |||| ||||| || ||||| || ||||| || ||||| ||||| ||||| || |||||
Sbjct: 17858 aagacacccagatcataaaaaacgctgctactacaaatctttctgaagctcttcgtaa 17915



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>ref|NM_102048.1| Arabidopsis thaliana unknown protein AT1G21990 mRNA, complete cds
          Length = 1398

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  cttagacaggacttgttcagtcatc 77
           |||||||||| ||||||||||||||
Sbjct: 228 cttagacaggccttgttcagtcatc 252



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>emb|CR855393.22| Zebrafish DNA sequence from clone DKEY-201L21 in linkage group 5,
              complete sequence
          Length = 226943

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     caattctgctagtgagagagt 42
              |||||||||||||||||||||
Sbjct: 226293 caattctgctagtgagagagt 226273



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     caattctgctagtgagagagt 42
              |||||||||||||||||||||
Sbjct: 196704 caattctgctagtgagagagt 196684



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>gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complete sequence
          Length = 212177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   cttaagcaggctttctgaaga 147
             |||||||||||||||||||||
Sbjct: 57370 cttaagcaggctttctgaaga 57390



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>emb|AL954323.5| Zebrafish DNA sequence from clone CH211-285C6 in linkage group 20
             Contains two novel genes, the gene for a novel protein
             similar to vertebrate NIMA (never in mitosis gene
             a)-related expressed kinase (NEK1), the gene for a novel
             protein similar to vertebrate NIMA (never in mitosis gene
             a)-related expressed kinase family and three CpG islands,
             complete sequence
          Length = 165873

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    caattctgctagtgagagagt 42
             |||||||||||||||||||||
Sbjct: 14179 caattctgctagtgagagagt 14159



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>gb|AF288462.1|AF288462 Chloroflexus aurantiacus AbcB (abcB) gene, partial cds; AbcA (abcA),
            PufB (pufB), PufA (pufA), PufC (pufC), BchGa (bchG), and
            BchP (bchP) genes, complete cds; and unknown gene
          Length = 8375

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 395  attcgcacagtaagagcctttgctcagga 423
            ||||||||||| | |||||||||||||||
Sbjct: 1948 attcgcacagtgaaagcctttgctcagga 1920



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>gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana BAC T2E6 from chromosome I,
             complete sequence
          Length = 95816

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 491   aaagttgttggactattttct 511
             |||||||||||||||||||||
Sbjct: 49383 aaagttgttggactattttct 49363



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>gb|AC069252.4|AC069252 Genomic sequence for Arabidopsis thaliana BAC F2E2 from chromosome I,
            complete sequence
          Length = 91825

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 53   cttagacaggacttgttcagtcatc 77
            |||||||||| ||||||||||||||
Sbjct: 9251 cttagacaggccttgttcagtcatc 9227



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>emb|BX465187.7| Zebrafish DNA sequence from clone DKEYP-6C7 in linkage group 20,
             complete sequence
          Length = 168640

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 234   tgttttcaacttcatggaagctgacattg 262
             |||||| |||||||||||||| |||||||
Sbjct: 54505 tgtttttaacttcatggaagcagacattg 54477



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>emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in linkage group 16, complete
              sequence
          Length = 226271

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 234    tgttttcaacttcatggaagctgacattg 262
              |||||| |||||||||||||| |||||||
Sbjct: 148924 tgtttttaacttcatggaagcagacattg 148896



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>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 304   taaatttgggcgttttcttcgtgagctt 331
             |||||||| ||||||||||| |||||||
Sbjct: 60602 taaatttgtgcgttttcttcttgagctt 60629



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>gb|AF202009.1| Uncultured human oral bacterium A18 16S ribosomal RNA gene, partial
           sequence
          Length = 996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 cgtgagctttcacatcagac 342
           ||||||||||||||||||||
Sbjct: 83  cgtgagctttcacatcagac 64



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>ref|XM_844861.1| PREDICTED: Canis familiaris similar to splicing coactivator subunit
            SRm300 (LOC607984), mRNA
          Length = 1364

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  gctgcggctgctgtagcttc 366
            ||||||||||||||||||||
Sbjct: 1268 gctgcggctgctgtagcttc 1249



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>gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete sequence
          Length = 115954

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tcttggcttcatgttttcaa 242
             ||||||||||||||||||||
Sbjct: 59167 tcttggcttcatgttttcaa 59186



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>gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequence
          Length = 141578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gctgcggctgctgtagcttc 366
              ||||||||||||||||||||
Sbjct: 105810 gctgcggctgctgtagcttc 105791



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>gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome 9, complete sequence
          Length = 221907

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    caaattataaagaatgctgc 171
              ||||||||||||||||||||
Sbjct: 132794 caaattataaagaatgctgc 132813



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>emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chromosome 10 Contains a
             RAB11B, member RAS oncogene family (H-YPT3) pseudogene, 5'
             end of a novel gene (FLJ33990) and one CpG island,
             complete sequence
          Length = 85322

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   tggcttcatgttttcaactt 245
             ||||||||||||||||||||
Sbjct: 82864 tggcttcatgttttcaactt 82845



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>ref|XM_783518.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC583616 (LOC583616), mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 473 cttggtctcaagcaagctaa 492
           ||||||||||||||||||||
Sbjct: 463 cttggtctcaagcaagctaa 482



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>emb|Z99122.2|BSUB0019 Bacillus subtilis complete genome (section 19 of 21): from 3608981 to
              3809670
          Length = 200690

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 234    tgttttcaacttcatggaagctga 257
              |||||||||||| |||||||||||
Sbjct: 123732 tgttttcaacttaatggaagctga 123709



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>emb|Z92952.1|BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] genes
          Length = 14047

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 234  tgttttcaacttcatggaagctga 257
            |||||||||||| |||||||||||
Sbjct: 2674 tgttttcaacttaatggaagctga 2697



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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     agacacaagctgcggctgct 358
               ||||||||||||||||||||
Sbjct: 2042419 agacacaagctgcggctgct 2042400



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>gb|AF424783.1| Staphylococcus aureus phage phi 13, complete genome
          Length = 42722

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   agacacaagctgcggctgct 358
             ||||||||||||||||||||
Sbjct: 26218 agacacaagctgcggctgct 26237



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>emb|BX276081.12| Zebrafish DNA sequence from clone CH211-270G19 in linkage group 10,
              complete sequence
          Length = 130240

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    ctgcggctgctgtagcttcatcca 371
              ||||||||||||| ||||||||||
Sbjct: 112384 ctgcggctgctgtcgcttcatcca 112361



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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     agacacaagctgcggctgct 358
               ||||||||||||||||||||
Sbjct: 2048415 agacacaagctgcggctgct 2048396



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>gb|AY244781.1| Gemella bergeri 16S ribosomal RNA gene, partial sequence
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 cgtgagctttcacatcagac 342
           ||||||||||||||||||||
Sbjct: 415 cgtgagctttcacatcagac 396



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 304      taaatttgggcgttttcttcgtgagctt 331
                |||||||| ||||||||||| |||||||
Sbjct: 21603976 taaatttgtgcgttttcttcttgagctt 21604003



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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     agacacaagctgcggctgct 358
               ||||||||||||||||||||
Sbjct: 2063173 agacacaagctgcggctgct 2063154



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>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1228_C03, complete sequence
          Length = 31468

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 304   taaatttgggcgttttcttcgtgagctt 331
             |||||||| ||||||||||| |||||||
Sbjct: 12300 taaatttgtgcgttttcttcttgagctt 12327



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>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence
          Length = 1332022

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    acgatatggcggaaaagtaa 458
              ||||||||||||||||||||
Sbjct: 322694 acgatatggcggaaaagtaa 322713



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>emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on chromosome 17, complete
              sequence
          Length = 199120

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 226    tggcttcatgttttcaacttcatg 249
              |||||||||||||||| |||||||
Sbjct: 171535 tggcttcatgttttcaccttcatg 171512



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>dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT27F14, TM0387,
             complete sequence
          Length = 96031

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   ctgcaacaacaaacctttcagaag 191
             ||||||||||||||||| ||||||
Sbjct: 64444 ctgcaacaacaaaccttacagaag 64467



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>emb|Y13363.1|GSPY13363 Gemella sp. 16S rRNA gene (strain 1754-94)
          Length = 1508

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 cgtgagctttcacatcagac 342
           ||||||||||||||||||||
Sbjct: 598 cgtgagctttcacatcagac 579



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>emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chromosome 4, complete
             sequence
          Length = 205273

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   acaaacctttcagaagcact 195
             ||||||||||||||||||||
Sbjct: 44917 acaaacctttcagaagcact 44936



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>dbj|AB009866.2| Bacteriophage phi PVL proviral DNA, complete sequence
          Length = 41401

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 339  agacacaagctgcggctgct 358
            ||||||||||||||||||||
Sbjct: 9200 agacacaagctgcggctgct 9219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,705,675
Number of Sequences: 3902068
Number of extensions: 4705675
Number of successful extensions: 100259
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99996
Number of HSP's gapped (non-prelim): 261
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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