ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189952.1| Oryza sativa (japonica cultivar-group), predic... 511 e-142
2dbj|AK112102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
3dbj|AK111958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
4dbj|AK098948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 309 5e-81
6dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 309 5e-81
7gb|BT023972.1| Zea mays clone EL01N0401B01 mRNA sequence 262 1e-66
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
9dbj|AK111511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
11emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa... 80 9e-12
12gb|BT018914.1| Zea mays clone EL01T0403G12.d mRNA sequence 76 1e-10
13gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
15dbj|AK112047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
16dbj|AK110345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
18ref|NM_121660.3| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN ... 58 3e-05
19ref|NM_203061.1| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN ... 58 3e-05
20ref|NM_180710.2| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN ... 58 3e-05
21emb|BX831982.1|CNS09ZQQ Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
22emb|BX831193.1|CNS09ZH5 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
23emb|BX830990.1|CNS09ZHS Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
24gb|AY084634.1| Arabidopsis thaliana clone 113763 mRNA, complete ... 58 3e-05
25dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 3e-05
26gb|AF138872.1|AF138872 Arabidopsis thaliana zinc finger protein ... 58 3e-05
27gb|AY105977.1| Zea mays PCO089407 mRNA sequence 56 1e-04
28gb|BC019429.1| Mus musculus cDNA clone MGC:30371 IMAGE:5149920, ... 54 5e-04
29gb|AF160977.1|AF160977 Pisum sativum zinc finger protein mRNA, c... 52 0.002
30ref|NM_111151.3| Arabidopsis thaliana ZFN1 (ZINC FINGER PROTEIN ... 50 0.008
31gb|BT014160.1| Lycopersicon esculentum clone 133280F, mRNA sequence 50 0.008
32gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC... 50 0.008
33emb|BX822532.1|CNS0A63L Arabidopsis thaliana Full-length cDNA Co... 50 0.008
34emb|BX825278.1|CNS0A55A Arabidopsis thaliana Full-length cDNA Co... 50 0.008
35emb|BX831370.1|CNS09ZFA Arabidopsis thaliana Full-length cDNA Co... 50 0.008
36gb|AF138743.1|AF138743 Arabidopsis thaliana zinc finger protein ... 50 0.008
37gb|BC004640.1| Mus musculus WW domain containing transcription r... 42 2.0
38gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, comp... 42 2.0
39gb|BC014727.1| Mus musculus WW domain containing transcription r... 42 2.0
40emb|AJ299430.1|MMU299430 Mus musculus mRNA for transcriptional c... 42 2.0
41gb|AY128342.1| Arabidopsis thaliana zinc finger protein 3 (At5g1... 42 2.0
42dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 42 2.0
43dbj|AK142720.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 42 2.0
44dbj|AK142299.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 42 2.0
45dbj|AK009983.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 2.0
46gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome... 42 2.0
47dbj|AK011504.1| Mus musculus 10 days embryo whole body cDNA, RIK... 42 2.0
48ref|NM_133784.2| Mus musculus WW domain containing transcription... 42 2.0
49emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 ... 42 2.0
50emb|AL662922.10| Mouse DNA sequence from clone RP23-195K1 on chr... 42 2.0
51emb|Z68323.2|HSN13G6 Human DNA sequence from clone LL22NC03-13G6... 40 7.7
52ref|XM_505106.1| Yarrowia lipolytica CLIB122, YALI0F07084g predi... 40 7.7
53gb|AC107918.5| Homo sapiens chromosome 8, clone RP11-481A20, com... 40 7.7
54gb|AC106847.3| Homo sapiens chromosome 8, clone CTD-2333A6, comp... 40 7.7
55emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 i... 40 7.7
56gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosom... 40 7.7
57gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Can... 40 7.7
58emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, ... 40 7.7
59emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 7.7
60gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 7.7
61emb|AL671999.6| Mouse DNA sequence from clone RP23-149D11 on chr... 40 7.7
62gb|CP000035.1| Shigella dysenteriae Sd197 plasmid pSD1_197, comp... 40 7.7
63gb|J03311.1|ECOSTET E. coli estA4 gene encoding a methanol solub... 40 7.7
64emb|AL840628.3| Mouse DNA sequence from clone RP23-311O2 on chro... 40 7.7 
>ref|NM_189952.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1263

 Score =  511 bits (258), Expect = e-142
 Identities = 466/534 (87%), Gaps = 1/534 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
            ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 547  ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 605

                                                                        
Query: 61   aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
             | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 606  gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 665

                                                                        
Query: 121  gaactcatatcctgggcaaatggtacctgtttcatctcctgagagtcgactacagtctcc 180
            |||||||||| |||| |||||| | |||||||||||| ||||||||||||| ||||| ||
Sbjct: 666  gaactcatatactggccaaatgatgcctgtttcatcttctgagagtcgactgcagtcccc 725

                                                                        
Query: 181  aggagctcaacaatactatggaacttctcgacaaggtgaaggcagtgcaggaaatcaggg 240
            ||| |||||||||  ||||||||||||||  |||| ||| | ||||||||| ||||||||
Sbjct: 726  aggggctcaacaaacctatggaacttctcagcaagttgatgccagtgcaggcaatcaggg 785

                                                                        
Query: 241  aatgcaatcaccctacagatccagttcatttcctgtacctcagtatgcactgcagagaga 300
            ||||   |||||||||||||| ||||||| |||||||||||| || ||| ||||||||||
Sbjct: 786  aatgttgtcaccctacagatctagttcatatcctgtacctcaatacgcattgcagagaga 845

                                                                        
Query: 301  gaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagactggaga 360
            |||||||||||||||||||||||||||||| |||||   ||||||||| |||||||||||
Sbjct: 846  gaatgtatttcctgagagacctgatcaaccagaatgtcaatactacatgaagactggaga 905

                                                                        
Query: 361  ctgtaaatttggtgcagtttgcaaattccatcatccccgtgtgcgttcacagcctccccc 420
            ||||||||||||||| || ||||| |||||||||||||| ||||| |||  |||| | ||
Sbjct: 906  ctgtaaatttggtgcggtgtgcaagttccatcatccccgggtgcgatcaatgcctactcc 965

                                                                        
Query: 421  agactgtatcttgagcccaatgggtcttccattacgcccaggggaggagctctgcaagtt 480
            ||| ||| ||||||| ||| ||||||||||| |||| || || || || || ||||||||
Sbjct: 966  agattgtgtcttgagtccagtgggtcttccactacgtccgggagaagaactgtgcaagtt 1025

                                                                  
Query: 481  ctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccatcc 534
            ||| ||||||||||||||||||||||| ||||  || ||||| || ||||||||
Sbjct: 1026 ctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccatcc 1079
to top
>dbj|AK112102.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-B05, full
           insert sequence
          Length = 1733

 Score =  511 bits (258), Expect = e-142
 Identities = 466/534 (87%), Gaps = 1/534 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
           ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 431 ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 489

                                                                       
Query: 61  aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
            | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 490 gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 549

                                                                       
Query: 121 gaactcatatcctgggcaaatggtacctgtttcatctcctgagagtcgactacagtctcc 180
           |||||||||| |||| |||||| | |||||||||||| ||||||||||||| ||||| ||
Sbjct: 550 gaactcatatactggccaaatgatgcctgtttcatcttctgagagtcgactgcagtcccc 609

                                                                       
Query: 181 aggagctcaacaatactatggaacttctcgacaaggtgaaggcagtgcaggaaatcaggg 240
           ||| |||||||||  ||||||||||||||  |||| ||| | ||||||||| ||||||||
Sbjct: 610 aggggctcaacaaacctatggaacttctcagcaagttgatgccagtgcaggcaatcaggg 669

                                                                       
Query: 241 aatgcaatcaccctacagatccagttcatttcctgtacctcagtatgcactgcagagaga 300
           ||||   |||||||||||||| ||||||| |||||||||||| || ||| ||||||||||
Sbjct: 670 aatgttgtcaccctacagatctagttcatatcctgtacctcaatacgcattgcagagaga 729

                                                                       
Query: 301 gaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagactggaga 360
           |||||||||||||||||||||||||||||| |||||   ||||||||| |||||||||||
Sbjct: 730 gaatgtatttcctgagagacctgatcaaccagaatgtcaatactacatgaagactggaga 789

                                                                       
Query: 361 ctgtaaatttggtgcagtttgcaaattccatcatccccgtgtgcgttcacagcctccccc 420
           ||||||||||||||| || ||||| |||||||||||||| ||||| |||  |||| | ||
Sbjct: 790 ctgtaaatttggtgcggtgtgcaagttccatcatccccgggtgcgatcaatgcctactcc 849

                                                                       
Query: 421 agactgtatcttgagcccaatgggtcttccattacgcccaggggaggagctctgcaagtt 480
           ||| ||| ||||||| ||| ||||||||||| |||| || || || || || ||||||||
Sbjct: 850 agattgtgtcttgagtccagtgggtcttccactacgtccgggagaagaactgtgcaagtt 909

                                                                 
Query: 481 ctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccatcc 534
           ||| ||||||||||||||||||||||| ||||  || ||||| || ||||||||
Sbjct: 910 ctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccatcc 963
to top
>dbj|AK111958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A08, full
           insert sequence
          Length = 903

 Score =  511 bits (258), Expect = e-142
 Identities = 466/534 (87%), Gaps = 1/534 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
           ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 77  ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 135

                                                                       
Query: 61  aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
            | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 136 gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 195

                                                                       
Query: 121 gaactcatatcctgggcaaatggtacctgtttcatctcctgagagtcgactacagtctcc 180
           |||||||||| |||| |||||| | |||||||||||| ||||||||||||| ||||| ||
Sbjct: 196 gaactcatatactggccaaatgatgcctgtttcatcttctgagagtcgactgcagtcccc 255

                                                                       
Query: 181 aggagctcaacaatactatggaacttctcgacaaggtgaaggcagtgcaggaaatcaggg 240
           ||| |||||||||  ||||||||||||||  |||| ||| | ||||||||| ||||||||
Sbjct: 256 aggggctcaacaaacctatggaacttctcagcaagttgatgccagtgcaggcaatcaggg 315

                                                                       
Query: 241 aatgcaatcaccctacagatccagttcatttcctgtacctcagtatgcactgcagagaga 300
           ||||   |||||||||||||| ||||||| |||||||||||| || ||| ||||||||||
Sbjct: 316 aatgttgtcaccctacagatctagttcatatcctgtacctcaatacgcattgcagagaga 375

                                                                       
Query: 301 gaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagactggaga 360
           |||||||||||||||||||||||||||||| |||||   ||||||||| |||||||||||
Sbjct: 376 gaatgtatttcctgagagacctgatcaaccagaatgtcaatactacatgaagactggaga 435

                                                                       
Query: 361 ctgtaaatttggtgcagtttgcaaattccatcatccccgtgtgcgttcacagcctccccc 420
           ||||||||||||||| || ||||| |||||||||||||| ||||| |||  |||| | ||
Sbjct: 436 ctgtaaatttggtgcggtgtgcaagttccatcatccccgggtgcgatcaatgcctactcc 495

                                                                       
Query: 421 agactgtatcttgagcccaatgggtcttccattacgcccaggggaggagctctgcaagtt 480
           ||| ||| ||||||| ||| ||||||||||| |||| || || || || || ||||||||
Sbjct: 496 agattgtgtcttgagtccagtgggtcttccactacgtccgggagaagaactgtgcaagtt 555

                                                                 
Query: 481 ctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccatcc 534
           ||| ||||||||||||||||||||||| ||||  || ||||| || ||||||||
Sbjct: 556 ctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccatcc 609
to top
>dbj|AK098948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050D10, full
            insert sequence
          Length = 1656

 Score =  511 bits (258), Expect = e-142
 Identities = 466/534 (87%), Gaps = 1/534 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
            ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 830  ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 888

                                                                        
Query: 61   aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
             | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 889  gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 948

                                                                        
Query: 121  gaactcatatcctgggcaaatggtacctgtttcatctcctgagagtcgactacagtctcc 180
            |||||||||| |||| |||||| | |||||||||||| ||||||||||||| ||||| ||
Sbjct: 949  gaactcatatactggccaaatgatgcctgtttcatcttctgagagtcgactgcagtcccc 1008

                                                                        
Query: 181  aggagctcaacaatactatggaacttctcgacaaggtgaaggcagtgcaggaaatcaggg 240
            ||| |||||||||  ||||||||||||||  |||| ||| | ||||||||| ||||||||
Sbjct: 1009 aggggctcaacaaacctatggaacttctcagcaagttgatgccagtgcaggcaatcaggg 1068

                                                                        
Query: 241  aatgcaatcaccctacagatccagttcatttcctgtacctcagtatgcactgcagagaga 300
            ||||   |||||||||||||| ||||||| |||||||||||| || ||| ||||||||||
Sbjct: 1069 aatgttgtcaccctacagatctagttcatatcctgtacctcaatacgcattgcagagaga 1128

                                                                        
Query: 301  gaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagactggaga 360
            |||||||||||||||||||||||||||||| |||||   ||||||||| |||||||||||
Sbjct: 1129 gaatgtatttcctgagagacctgatcaaccagaatgtcaatactacatgaagactggaga 1188

                                                                        
Query: 361  ctgtaaatttggtgcagtttgcaaattccatcatccccgtgtgcgttcacagcctccccc 420
            ||||||||||||||| || ||||| |||||||||||||| ||||| |||  |||| | ||
Sbjct: 1189 ctgtaaatttggtgcggtgtgcaagttccatcatccccgggtgcgatcaatgcctactcc 1248

                                                                        
Query: 421  agactgtatcttgagcccaatgggtcttccattacgcccaggggaggagctctgcaagtt 480
            ||| ||| ||||||| ||| ||||||||||| |||| || || || || || ||||||||
Sbjct: 1249 agattgtgtcttgagtccagtgggtcttccactacgtccgggagaagaactgtgcaagtt 1308

                                                                  
Query: 481  ctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccatcc 534
            ||| ||||||||||||||||||||||| ||||  || ||||| || ||||||||
Sbjct: 1309 ctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccatcc 1362
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  309 bits (156), Expect = 5e-81
 Identities = 279/320 (87%)
 Strand = Plus / Minus

                                                                            
Query: 137      caaatggtacctgtttcatctcctgagagtcgactacagtctccaggagctcaacaatac 196
                |||||| | |||||||||||| ||||||||||||| ||||| ||||| |||||||||  |
Sbjct: 40000971 caaatgatgcctgtttcatcttctgagagtcgactgcagtccccaggggctcaacaaacc 40000912

                                                                            
Query: 197      tatggaacttctcgacaaggtgaaggcagtgcaggaaatcagggaatgcaatcaccctac 256
                |||||||||||||  |||| ||| | ||||||||| ||||||||||||   |||||||||
Sbjct: 40000911 tatggaacttctcagcaagttgatgccagtgcaggcaatcagggaatgttgtcaccctac 40000852

                                                                            
Query: 257      agatccagttcatttcctgtacctcagtatgcactgcagagagagaatgtatttcctgag 316
                ||||| ||||||| |||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 40000851 agatctagttcatatcctgtacctcaatacgcattgcagagagagaatgtatttcctgag 40000792

                                                                            
Query: 317      agacctgatcaaccggaatgcatatactacataaagactggagactgtaaatttggtgca 376
                |||||||||||||| |||||   ||||||||| |||||||||||||||||||||||||| 
Sbjct: 40000791 agacctgatcaaccagaatgtcaatactacatgaagactggagactgtaaatttggtgcg 40000732

                                                                            
Query: 377      gtttgcaaattccatcatccccgtgtgcgttcacagcctcccccagactgtatcttgagc 436
                || ||||| |||||||||||||| ||||| |||  |||| | ||||| ||| ||||||| 
Sbjct: 40000731 gtgtgcaagttccatcatccccgggtgcgatcaatgcctactccagattgtgtcttgagt 40000672

                                    
Query: 437      ccaatgggtcttccattacg 456
                ||| ||||||||||| ||||
Sbjct: 40000671 ccagtgggtcttccactacg 40000652



 Score =  155 bits (78), Expect = 2e-34
 Identities = 118/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
                ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 40001855 ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 40001797

                                                                            
Query: 61       aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
                 | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 40001796 gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 40001737

                          
Query: 121      gaactcatat 130
                ||||||||||
Sbjct: 40001736 gaactcatat 40001727



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 473      tgcaagttctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccat 532
                ||||||||||| ||||||||||||||||||||||| ||||  || ||||| || ||||||
Sbjct: 40000157 tgcaagttctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccat 40000098

                  
Query: 533      cc 534
                ||
Sbjct: 40000097 cc 40000096
to top
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413C03
          Length = 162161

 Score =  309 bits (156), Expect = 5e-81
 Identities = 279/320 (87%)
 Strand = Plus / Minus

                                                                         
Query: 137   caaatggtacctgtttcatctcctgagagtcgactacagtctccaggagctcaacaatac 196
             |||||| | |||||||||||| ||||||||||||| ||||| ||||| |||||||||  |
Sbjct: 92422 caaatgatgcctgtttcatcttctgagagtcgactgcagtccccaggggctcaacaaacc 92363

                                                                         
Query: 197   tatggaacttctcgacaaggtgaaggcagtgcaggaaatcagggaatgcaatcaccctac 256
             |||||||||||||  |||| ||| | ||||||||| ||||||||||||   |||||||||
Sbjct: 92362 tatggaacttctcagcaagttgatgccagtgcaggcaatcagggaatgttgtcaccctac 92303

                                                                         
Query: 257   agatccagttcatttcctgtacctcagtatgcactgcagagagagaatgtatttcctgag 316
             ||||| ||||||| |||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 92302 agatctagttcatatcctgtacctcaatacgcattgcagagagagaatgtatttcctgag 92243

                                                                         
Query: 317   agacctgatcaaccggaatgcatatactacataaagactggagactgtaaatttggtgca 376
             |||||||||||||| |||||   ||||||||| |||||||||||||||||||||||||| 
Sbjct: 92242 agacctgatcaaccagaatgtcaatactacatgaagactggagactgtaaatttggtgcg 92183

                                                                         
Query: 377   gtttgcaaattccatcatccccgtgtgcgttcacagcctcccccagactgtatcttgagc 436
             || ||||| |||||||||||||| ||||| |||  |||| | ||||| ||| ||||||| 
Sbjct: 92182 gtgtgcaagttccatcatccccgggtgcgatcaatgcctactccagattgtgtcttgagt 92123

                                 
Query: 437   ccaatgggtcttccattacg 456
             ||| ||||||||||| ||||
Sbjct: 92122 ccagtgggtcttccactacg 92103



 Score =  155 bits (78), Expect = 2e-34
 Identities = 118/130 (90%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     ggaacaatggcaagttggacttatccaagnaggttctttcattccaagccctagatggca 60
             ||||||||||| || ||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 93306 ggaacaatggctagctgggcttttccaag-aggttcttttattccaagccctagatggca 93248

                                                                         
Query: 61    aagtccttcaaactatacaccgatgattgtaccgcagggtcttgttcaagtaccaagctg 120
              | ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 93247 gaatccctcaaattatgcaccgatgattgtaccgcaaggtcttgttcaagtaccaagctg 93188

                       
Query: 121   gaactcatat 130
             ||||||||||
Sbjct: 93187 gaactcatat 93178



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 473   tgcaagttctactctcgctatggcatctgcaagtttggcgtaaactgcaagttcgaccat 532
             ||||||||||| ||||||||||||||||||||||| ||||  || ||||| || ||||||
Sbjct: 91608 tgcaagttctattctcgctatggcatctgcaagttcggcgcgaattgcaaatttgaccat 91549

               
Query: 533   cc 534
             ||
Sbjct: 91548 cc 91547
to top
>gb|BT023972.1| Zea mays clone EL01N0401B01 mRNA sequence
          Length = 1490

 Score =  262 bits (132), Expect = 1e-66
 Identities = 270/316 (85%)
 Strand = Plus / Plus

                                                                        
Query: 197  tatggaacttctcgacaaggtgaaggcagtgcaggaaatcagggaatgcaatcaccctac 256
            ||||||| ||| | |||||| ||||  ||| |||||||||||||||||| ||||||||||
Sbjct: 947  tatggaagttcacaacaaggcgaagctagtacaggaaatcagggaatgctatcaccctac 1006

                                                                        
Query: 257  agatccagttcatttcctgtacctcagtatgcactgcagagagagaatgtatttcctgag 316
            ||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1007 agatctagttcgtttcctgtgcctcaatatgcgctgcagagagagaatgtatttcctgag 1066

                                                                        
Query: 317  agacctgatcaaccggaatgcatatactacataaagactggagactgtaaatttggtgca 376
            ||||||||| |||| ||||||  ||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 1067 agacctgatgaaccagaatgccaatattacatgaagacaggagattgtaaattcggtgca 1126

                                                                        
Query: 377  gtttgcaaattccatcatccccgtgtgcgttcacagcctcccccagactgtatcttgagc 436
            || ||||| |||||||||||||| ||| | |||| ||| || ||||| ||| |||| || 
Sbjct: 1127 gtgtgcaagttccatcatccccgggtgagatcactgccccctccagattgtgtcttaagt 1186

                                                                        
Query: 437  ccaatgggtcttccattacgcccaggggaggagctctgcaagttctactctcgctatggc 496
            ||||||||||||||  |||| ||||| || || || ||||| ||||| ||||| || |||
Sbjct: 1187 ccaatgggtcttcccctacgtccaggtgaagaactgtgcaaattctattctcgttacggc 1246

                            
Query: 497  atctgcaagtttggcg 512
            ||||||||||| ||||
Sbjct: 1247 atctgcaagttcggcg 1262



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                       
Query: 34  ttctttcattccaagccctagatggcaaagtccttcaaactatacaccgatgattgtacc 93
           |||||| || ||||||||||| ||||||||||||||||| ||| | ||||||||||||||
Sbjct: 814 ttcttttataccaagccctaggtggcaaagtccttcaaattatgcgccgatgattgtacc 873

                                                     
Query: 94  gcagggtcttgttcaagtaccaagctggaactcatatcctgg 135
            ||||| ||||||||| | || |||||||| |||||| ||||
Sbjct: 874 tcagggccttgttcaaatgccgagctggaattcatatactgg 915
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 306      tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
                ||||||||||||||||||||||||| || ||   || |||||| || |||||||||||||
Sbjct: 12245181 tatttcctgagagacctgatcaaccagagtgtcaattctacatgaaaactggagactgta 12245240

                                            
Query: 366      aatttggtgcagtttgcaaattccatca 393
                | |||||||| |||||||| || |||||
Sbjct: 12245241 agtttggtgctgtttgcaagtttcatca 12245268
to top
>dbj|AK111511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J05, full
            insert sequence
          Length = 2128

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                        
Query: 306  tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
            ||||||||||||||||||||||||| || ||   || |||||| || |||||||||||||
Sbjct: 1123 tatttcctgagagacctgatcaaccagagtgtcaattctacatgaaaactggagactgta 1182

                                        
Query: 366  aatttggtgcagtttgcaaattccatca 393
            | |||||||| |||||||| || |||||
Sbjct: 1183 agtttggtgctgtttgcaagtttcatca 1210
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 306      tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
                ||||||||||||||||||||||||| || ||   || |||||| || |||||||||||||
Sbjct: 12199551 tatttcctgagagacctgatcaaccagagtgtcaattctacatgaaaactggagactgta 12199610

                                            
Query: 366      aatttggtgcagtttgcaaattccatca 393
                | |||||||| |||||||| || |||||
Sbjct: 12199611 agtttggtgctgtttgcaagtttcatca 12199638
to top
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159296

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 306   tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
             ||||||||||||||||||||||||| || ||   || |||||| || |||||||||||||
Sbjct: 52136 tatttcctgagagacctgatcaaccagagtgtcaattctacatgaaaactggagactgta 52077

                                         
Query: 366   aatttggtgcagtttgcaaattccatca 393
             | |||||||| |||||||| || |||||
Sbjct: 52076 agtttggtgctgtttgcaagtttcatca 52049
to top
>gb|BT018914.1| Zea mays clone EL01T0403G12.d mRNA sequence
          Length = 1963

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                        
Query: 284  tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
            |||||| | ||||| |||||| ||||||| ||||||||||| ||||| |||||    | |
Sbjct: 1064 tatgcagtacagagggagaatttatttccagagagacctgaccaacctgaatgtcagttc 1123

                                                                  
Query: 344  tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatccc 397
            || || ||||| ||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1124 tatatgaagaccggagactgtaagtttggtgctgtatgcaagttccatcatccc 1177
to top
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                         
Query: 306   tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
             ||||||| ||| ||||||| ||||| ||||||   | ||| || |||||||| |||||||
Sbjct: 78187 tatttccagagcgacctgaccaaccagaatgccagttctatatgaagactggggactgta 78128

                                             
Query: 366   aatttggtgcagtttgcaaattccatcatccc 397
             | |||||||| || ||||| ||||||||||||
Sbjct: 78127 agtttggtgctgtatgcaagttccatcatccc 78096



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 479   ttctactctcgctatggcatctgcaagtttgg 510
             ||||| ||||||||||||||||||||||||||
Sbjct: 77107 ttctattctcgctatggcatctgcaagtttgg 77076
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                            
Query: 306      tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
                ||||||| ||| ||||||| ||||| ||||||   | ||| || |||||||| |||||||
Sbjct: 15668506 tatttccagagcgacctgaccaaccagaatgccagttctatatgaagactggggactgta 15668447

                                                
Query: 366      aatttggtgcagtttgcaaattccatcatccc 397
                | |||||||| || ||||| ||||||||||||
Sbjct: 15668446 agtttggtgctgtatgcaagttccatcatccc 15668415



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 479      ttctactctcgctatggcatctgcaagtttgg 510
                ||||| ||||||||||||||||||||||||||
Sbjct: 15667426 ttctattctcgctatggcatctgcaagtttgg 15667395
to top
>dbj|AK112047.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F12, full
           insert sequence
          Length = 1043

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 306 tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
           ||||||| ||| ||||||| ||||| ||||||   | ||| || |||||||| |||||||
Sbjct: 71  tatttccagagcgacctgaccaaccagaatgccagttctatatgaagactggggactgta 130

                                           
Query: 366 aatttggtgcagtttgcaaattccatcatccc 397
           | |||||||| || ||||| ||||||||||||
Sbjct: 131 agtttggtgctgtatgcaagttccatcatccc 162



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 479 ttctactctcgctatggcatctgcaagtttgg 510
           ||||| ||||||||||||||||||||||||||
Sbjct: 244 ttctattctcgctatggcatctgcaagtttgg 275
to top
>dbj|AK110345.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G05, full
            insert sequence
          Length = 2873

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                        
Query: 306  tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
            ||||||| ||| ||||||| ||||| ||||||   | ||| || |||||||| |||||||
Sbjct: 1113 tatttccagagcgacctgaccaaccagaatgccagttctatatgaagactggggactgta 1172

                                            
Query: 366  aatttggtgcagtttgcaaattccatcatccc 397
            | |||||||| || ||||| ||||||||||||
Sbjct: 1173 agtttggtgctgtatgcaagttccatcatccc 1204



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 479  ttctactctcgctatggcatctgcaagtttgg 510
            ||||| ||||||||||||||||||||||||||
Sbjct: 1286 ttctattctcgctatggcatctgcaagtttgg 1317
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                            
Query: 306      tatttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgta 365
                ||||||| ||| ||||||| ||||| ||||||   | ||| || |||||||| |||||||
Sbjct: 15755883 tatttccagagcgacctgaccaaccagaatgccagttctatatgaagactggggactgta 15755824

                                                
Query: 366      aatttggtgcagtttgcaaattccatcatccc 397
                | |||||||| || ||||| ||||||||||||
Sbjct: 15755823 agtttggtgctgtatgcaagttccatcatccc 15755792



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 479      ttctactctcgctatggcatctgcaagtttgg 510
                ||||| ||||||||||||||||||||||||||
Sbjct: 15754803 ttctattctcgctatggcatctgcaagtttgg 15754772
to top
>ref|NM_121660.3| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid
           binding AT5G16540 (ZFN3) transcript variant AT5G16540.2
           mRNA, complete cds
          Length = 1330

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 296 agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
           |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 816 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 875

                                                    
Query: 356 ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 876 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 916



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 977  gttctattctcggtatgggatctgcaagtttgg 1009
to top
>ref|NM_203061.1| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid
            binding AT5G16540 (ZFN3) transcript variant AT5G16540.3
            mRNA, complete cds
          Length = 1559

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 296  agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
            |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 1017 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 1076

                                                     
Query: 356  ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 1077 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 1117



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1199 gttctattctcggtatgggatctgcaagtttgg 1231
to top
>ref|NM_180710.2| Arabidopsis thaliana ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid
            binding AT5G16540 (ZFN3) transcript variant AT5G16540.1
            mRNA, complete cds
          Length = 1497

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 296  agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
            |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 955  agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 1014

                                                     
Query: 356  ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 1015 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 1055



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1137 gttctattctcggtatgggatctgcaagtttgg 1169
to top
>emb|BX831982.1|CNS09ZQQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH43ZE12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1515

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 296  agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
            |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 1017 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 1076

                                                     
Query: 356  ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 1077 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 1117



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1199 gttctattctcggtatgggatctgcaagtttgg 1231
to top
>emb|BX831193.1|CNS09ZH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS67ZB08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1334

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 296 agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
           |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 834 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 893

                                                    
Query: 356 ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 894 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 934



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1016 gttctattctcggtatgggatctgcaagtttgg 1048
to top
>emb|BX830990.1|CNS09ZHS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS46ZE06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 296 agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
           |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 846 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 905

                                                    
Query: 356 ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 906 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 946



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1028 gttctattctcggtatgggatctgcaagtttgg 1060
to top
>gb|AY084634.1| Arabidopsis thaliana clone 113763 mRNA, complete sequence
          Length = 1406

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 296 agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
           |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 863 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 922

                                                    
Query: 356 ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 923 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 963



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1045 gttctattctcggtatgggatctgcaagtttgg 1077
to top
>dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4
          Length = 82001

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 296   agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
             |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 71241 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 71300

                                                      
Query: 356   ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
             ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 71301 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 71341



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 478   gttctactctcgctatggcatctgcaagtttgg 510
             |||||| ||||| ||||| ||||||||||||||
Sbjct: 71506 gttctattctcggtatgggatctgcaagtttgg 71538
to top
>gb|AF138872.1|AF138872 Arabidopsis thaliana zinc finger protein 3 (ZFN3) mRNA, complete
           cds
          Length = 1238

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 296 agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
           |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 706 agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 765

                                                    
Query: 356 ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| || ||||||||  |||| |||||||| ||||||||
Sbjct: 766 ggagattgcaaatttggaacagtctgcaaatttcatcatcc 806



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 478 gttctactctcgctatggcatctgcaagtttgg 510
           |||||| ||||| ||||| ||||||||||||||
Sbjct: 867 gttctattctcggtatgggatctgcaagtttgg 899
to top
>gb|AY105977.1| Zea mays PCO089407 mRNA sequence
          Length = 769

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 350 aagactggagactgtaaatttggtgcagtttgcaaattccatcatccc 397
           ||||| ||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 62  aagaccggagactgtaagtttggtgctgtatgcaagttccatcatccc 109
to top
>gb|BC019429.1| Mus musculus cDNA clone MGC:30371 IMAGE:5149920, complete cds
          Length = 1878

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 350 aagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||||||| | ||||||||||| ||||  |||||||||||||||||
Sbjct: 837 aagactggaaaatgtaaatttggcgcagcatgcaaattccatcatcc 883
to top
>gb|AF160977.1|AF160977 Pisum sativum zinc finger protein mRNA, complete cds
          Length = 1931

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 308  tttcctgagagacctgatcaaccggaatgcatatactacataaagactggagactgtaaa 367
            ||||| |||||||||||||| || ||||||  || |||||| ||||| ||||| || || 
Sbjct: 1122 tttccagagagacctgatcagcccgaatgccaattctacatgaagaccggagattgcaag 1181

                          
Query: 368  tttggtgcagtttg 381
            || |||||||||||
Sbjct: 1182 ttcggtgcagtttg 1195
to top
>ref|NM_111151.3| Arabidopsis thaliana ZFN1 (ZINC FINGER PROTEIN 1); nucleic acid
            binding AT3G02830 (ZFN1) mRNA, complete cds
          Length = 1658

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                        
Query: 284  tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
            |||||| ||| ||| || ||||| || || |||||||| |  ||||| ||||||  || |
Sbjct: 1023 tatgcattgccgagggaaaatgtgttcccggagagaccaggacaacccgaatgccaattc 1082

                                                                 
Query: 344  tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| ||||| || ||||| ||||||||  ||||||||||||| || |||||
Sbjct: 1083 tacatgaagacaggtgactgcaaatttggcacagtttgcaaatttcaccatcc 1135
to top
>gb|BT014160.1| Lycopersicon esculentum clone 133280F, mRNA sequence
          Length = 1675

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 344  tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| ||||| |||||||| || |||||||| ||||| | ||||||||||||
Sbjct: 1138 tacatgaagaccggagactgcaagtttggtgctgtttgtagattccatcatcc 1190
to top
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
             complete sequence
          Length = 100559

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                         
Query: 284   tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
             |||||| ||| ||| || ||||| || || |||||||| |  ||||| ||||||  || |
Sbjct: 70890 tatgcattgccgagggaaaatgtgttcccggagagaccaggacaacccgaatgccaattc 70831

                                                                  
Query: 344   tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
             ||||| ||||| || ||||| ||||||||  ||||||||||||| || |||||
Sbjct: 70830 tacatgaagacaggtgactgcaaatttggcacagtttgcaaatttcaccatcc 70778
to top
>emb|BX822532.1|CNS0A63L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB46ZG09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1549

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                        
Query: 284  tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
            |||||| ||| ||| || ||||| || || |||||||| |  ||||| ||||||  || |
Sbjct: 974  tatgcattgccgagggaaaatgtgttcccggagagaccaggacaacccgaatgccaattc 1033

                                                                 
Query: 344  tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| ||||| || ||||| ||||||||  ||||||||||||| || |||||
Sbjct: 1034 tacatgaagacaggtgactgcaaatttggcacagtttgcaaatttcaccatcc 1086
to top
>emb|BX825278.1|CNS0A55A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL26ZB01 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1522

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                        
Query: 284  tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
            |||||| ||| ||| || ||||| || || |||||||| |  ||||| ||||||  || |
Sbjct: 937  tatgcattgccgagggaaaatgtgttcccggagagaccaggacaacccgaatgccaattc 996

                                                                 
Query: 344  tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            ||||| ||||| || ||||| ||||||||  ||||||||||||| || |||||
Sbjct: 997  tacatgaagacaggtgactgcaaatttggcacagtttgcaaatttcaccatcc 1049
to top
>emb|BX831370.1|CNS09ZFA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS83ZD07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1470

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                        
Query: 296  agagagaatgtatttcctgagagacctgatcaaccggaatgcatatactacataaagact 355
            |||||||||||||| || || ||||| |  ||||| ||||||  || |||||| ||||| 
Sbjct: 955  agagagaatgtattcccggaaagaccaggccaacctgaatgccaattctacatgaagaca 1014

                                                     
Query: 356  ggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
            |||||  | ||||||||  |||| |||||||| ||||||||
Sbjct: 1015 ggagatcgcaaatttggaacagtctgcaaatttcatcatcc 1055



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 478  gttctactctcgctatggcatctgcaagtttgg 510
            |||||| ||||| ||||| ||||||||||||||
Sbjct: 1137 gttctattctcggtatgggatctgcaagtttgg 1169
to top
>gb|AF138743.1|AF138743 Arabidopsis thaliana zinc finger protein 1 (zfn1) mRNA, complete
           cds
          Length = 1440

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 91/113 (80%)
 Strand = Plus / Plus

                                                                       
Query: 284 tatgcactgcagagagagaatgtatttcctgagagacctgatcaaccggaatgcatatac 343
           |||||| ||| ||| || ||||| || || |||||||| |  ||||| ||||||  || |
Sbjct: 787 tatgcattgccgagggaaaatgtgttcccggagagaccaggacaacccgaatgccaattc 846

                                                                
Query: 344 tacataaagactggagactgtaaatttggtgcagtttgcaaattccatcatcc 396
           ||||| ||||| || ||||| ||||||||  ||||||||||||| || |||||
Sbjct: 847 tacatgaagacaggtgactgcaaatttggcacagtttgcaaatttcaccatcc 899
to top
>gb|BC004640.1| Mus musculus WW domain containing transcription regulator 1, mRNA
            (cDNA clone MGC:7084 IMAGE:3157246), complete cds
          Length = 1610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1279 gaaggcagtccaggaaatcagggaa 1255
to top
>gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, complete sequence
          Length = 247848

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 218    gaaggcagtgcaggaaatcagggaa 242
              ||||||||| |||||||||||||||
Sbjct: 116800 gaaggcagtccaggaaatcagggaa 116776
to top
>gb|BC014727.1| Mus musculus WW domain containing transcription regulator 1, mRNA
            (cDNA clone MGC:25480 IMAGE:4487316), complete cds
          Length = 1641

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1310 gaaggcagtccaggaaatcagggaa 1286
to top
>emb|AJ299430.1|MMU299430 Mus musculus mRNA for transcriptional coactivator (Taz gene)
          Length = 1882

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1293 gaaggcagtccaggaaatcagggaa 1269
to top
>gb|AY128342.1| Arabidopsis thaliana zinc finger protein 3 (At5g16540) mRNA,
           complete cds
          Length = 409

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 478 gttctactctcgctatggcatctgcaagtttgg 510
           |||||| ||||| ||||| ||||||||||||||
Sbjct: 49  gttctattctcggtatgggatctgcaagtttgg 81
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 238     gggaatgcaatcaccctacag 258
               |||||||||||||||||||||
Sbjct: 1759044 gggaatgcaatcaccctacag 1759064
to top
>dbj|AK142720.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
            library, clone:D830025K10 product:Transcriptional
            coactivator, full insert sequence
          Length = 4637

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1283 gaaggcagtccaggaaatcagggaa 1259
to top
>dbj|AK142299.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330039A13 product:Transcriptional
            coactivator, full insert sequence
          Length = 4533

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1280 gaaggcagtccaggaaatcagggaa 1256
to top
>dbj|AK009983.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310058J06 product:TRANSCRIPTIONAL
            COACTIVATOR, full insert sequence
          Length = 1861

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1289 gaaggcagtccaggaaatcagggaa 1265
to top
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence
          Length = 202807

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 405    gttcacagcctcccccagactgtat 429
              |||| ||||||||||||||||||||
Sbjct: 128997 gttctcagcctcccccagactgtat 129021
to top
>dbj|AK011504.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610021I22
            product:TRANSCRIPTIONAL COACTIVATOR homolog [Mus
            musculus], full insert sequence
          Length = 1643

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1332 gaaggcagtccaggaaatcagggaa 1308
to top
>ref|NM_133784.2| Mus musculus WW domain containing transcription regulator 1 (Wwtr1),
            mRNA
          Length = 4745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 218  gaaggcagtgcaggaaatcagggaa 242
            ||||||||| |||||||||||||||
Sbjct: 1358 gaaggcagtccaggaaatcagggaa 1334
to top
>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12,
              complete sequence
          Length = 203958

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    atttggtgcagtttgcaaatt 387
              |||||||||||||||||||||
Sbjct: 118761 atttggtgcagtttgcaaatt 118781
to top
>emb|AL662922.10| Mouse DNA sequence from clone RP23-195K1 on chromosome X, complete
             sequence
          Length = 215916

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   gagctcaacaatactatggaa 203
             |||||||||||||||||||||
Sbjct: 89315 gagctcaacaatactatggaa 89295
to top
>emb|Z68323.2|HSN13G6 Human DNA sequence from clone LL22NC03-13G6 on chromosome 22,
            complete sequence
          Length = 31004

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  agagaatgtatttcctgaga 317
            ||||||||||||||||||||
Sbjct: 7463 agagaatgtatttcctgaga 7482
to top
>ref|XM_505106.1| Yarrowia lipolytica CLIB122, YALI0F07084g predicted mRNA
          Length = 6951

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  tccaggagctcaacaatact 197
            ||||||||||||||||||||
Sbjct: 3320 tccaggagctcaacaatact 3339
to top
>gb|AC107918.5| Homo sapiens chromosome 8, clone RP11-481A20, complete sequence
          Length = 150507

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aaggtgaaggcagtgcagga 232
              ||||||||||||||||||||
Sbjct: 107966 aaggtgaaggcagtgcagga 107985
to top
>gb|AC106847.3| Homo sapiens chromosome 8, clone CTD-2333A6, complete sequence
          Length = 135431

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   aaggtgaaggcagtgcagga 232
             ||||||||||||||||||||
Sbjct: 43056 aaggtgaaggcagtgcagga 43037
to top
>emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 in linkage group 3,
            complete sequence
          Length = 202017

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  ctggagactgtaaatttggt 373
            ||||||||||||||||||||
Sbjct: 9978 ctggagactgtaaatttggt 9959
to top
>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence
          Length = 179919

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aaggtgaaggcagtgcagga 232
              ||||||||||||||||||||
Sbjct: 149189 aaggtgaaggcagtgcagga 149208
to top
>gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 198030

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   cactgcagagagagaatgta 307
             ||||||||||||||||||||
Sbjct: 34856 cactgcagagagagaatgta 34875
to top
>emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, complete sequence
          Length = 177281

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ctggagactgtaaatttggt 373
              ||||||||||||||||||||
Sbjct: 162274 ctggagactgtaaatttggt 162293
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     tccaggagctcaacaatact 197
               ||||||||||||||||||||
Sbjct: 1042325 tccaggagctcaacaatact 1042344
to top
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    atggcggccccgatgggggt 555
              ||||||||||||||||||||
Sbjct: 200908 atggcggccccgatgggggt 200889
to top
>emb|AL671999.6| Mouse DNA sequence from clone RP23-149D11 on chromosome 4, complete
              sequence
          Length = 206657

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    agctcaacaatactatggaa 203
              ||||||||||||||||||||
Sbjct: 179106 agctcaacaatactatggaa 179087
to top
>gb|CP000035.1| Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence
          Length = 182726

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   tgtttcatctcctgagagtc 167
             ||||||||||||||||||||
Sbjct: 53488 tgtttcatctcctgagagtc 53469
to top
>gb|J03311.1|ECOSTET E. coli estA4 gene encoding a methanol soluble heat-stable
           enterotoxin (STA4), complete cds
          Length = 962

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 tgtttcatctcctgagagtc 167
           ||||||||||||||||||||
Sbjct: 123 tgtttcatctcctgagagtc 142
to top
>emb|AL840628.3| Mouse DNA sequence from clone RP23-311O2 on chromosome 4, complete
             sequence
          Length = 57876

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   ctcccccagactgtatcttgagcc 437
             |||||||||||||| |||||||||
Sbjct: 10825 ctcccccagactgtgtcttgagcc 10802


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,417,796
Number of Sequences: 3902068
Number of extensions: 4417796
Number of successful extensions: 79750
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79533
Number of HSP's gapped (non-prelim): 212
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top