ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro... 345 3e-95
2ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protei... 248 9e-66
3ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing prot... 209 4e-54
4ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing prot... 167 1e-41
5ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro... 159 5e-39
6ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro... 159 7e-39
7ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro... 146 5e-35
8ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing pro... 132 9e-31
9ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing pro... 129 4e-30
10ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-conta... 125 1e-28
11ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing pro... 115 7e-26
12ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing pro... 108 1e-23
13ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing prot... 94 4e-19
14PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region p... 41 0.002
15PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region p... 41 0.002
16MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4) 41 0.003
17MKRN2_MOUSE (Q9ERV1) Makorin-2 40 0.006
18MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62) 40 0.006
19MKRN2_BRARE (Q9DFG8) Makorin-2 39 0.014
20ZFS1_SCHPO (P47979) Zinc-finger protein zfs1 37 0.030
21PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region pro... 37 0.030
22LEE1_YEAST (Q02799) Zinc finger protein LEE1 37 0.039
23PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region pro... 37 0.039
24SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7... 35 0.11
25CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity fa... 35 0.11
26DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (... 35 0.15
27PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region p... 35 0.15
28PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu... 35 0.20
29PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu... 35 0.20
30SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7... 35 0.20
31CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2 35 0.20
32PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula... 34 0.26
33LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1 34 0.26
34MKRN1_MOUSE (Q9QXP6) Makorin-1 34 0.33
35NUM1_YEAST (Q00402) Nuclear migration protein NUM1 34 0.33
36TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ... 34 0.33
37TIS1_DROME (P47980) Protein TIS11 (dTIS11) 33 0.44
38TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 3... 33 0.44
39TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 3... 33 0.44
40TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein) 33 0.44
41ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing pro... 33 0.57
42PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula... 33 0.57
43R3HD2_MOUSE (Q80TM6) R3H domain-containing protein 2 33 0.57
44PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu... 33 0.57
45PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu... 33 0.57
46MEX6_CAEEL (Q09436) Zinc finger protein mex-6 33 0.57
47TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36)... 33 0.74
48TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (E... 33 0.74
49TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein) 33 0.74
50TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) ... 33 0.74
51PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu... 33 0.74
52ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens... 33 0.74
53TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 3... 33 0.74
54DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (... 33 0.74
55U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliar... 33 0.74
56TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3... 33 0.74
57MKRN1_MACEU (Q9TT91) Makorin-1 33 0.74
58CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24 32 0.97
59MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127) 32 0.97
60MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5 32 0.97
61ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing pro... 32 0.97
62CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein) 32 1.3
63CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro... 32 1.7
64CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro... 32 1.7
65CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24 32 1.7
66CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity fa... 31 2.2
67MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61) 31 2.2
68SCP3_SCHPO (P41000) Protein scp3 31 2.2
69ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing pro... 31 2.2
70RN113_CAEEL (O17917) Putative RING finger protein 113 homolog 31 2.2
71YTH1_YEAST (Q06102) Protein YTH1 31 2.2
72MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF... 31 2.8
73U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar... 31 2.8
74U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliar... 31 2.8
75U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliar... 31 2.8
76B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-li... 30 3.7
77DDX20_MOUSE (Q9JJY4) Probable ATP-dependent RNA helicase DDX20 (... 30 3.7
78GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... 30 3.7
79R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger prote... 30 3.7
80ZN183_BOVIN (Q67ER4) Zinc finger protein 183 30 3.7
81R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger prote... 30 3.7
82CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24 30 3.7
83PACC_ASPNG (Q00203) pH-response transcription factor pacC/RIM101 30 3.7
84CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24 30 4.8
85YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III 30 4.8
86ADAM9_MOUSE (Q61072) ADAM 9 precursor (EC 3.4.24.-) (A disintegr... 30 4.8
87GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW21... 30 6.3
88MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C... 30 6.3
89CTH1_YEAST (P47976) Zinc finger protein CTH1 30 6.3
90CWC2_LEPMC (Q6T412) Pre-mRNA-splicing factor CWC2 30 6.3
91PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (P... 30 6.3
92OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 30 6.3
93ZYX_HUMAN (Q15942) Zyxin (Zyxin-2) 29 8.2
94GRHL3_HUMAN (Q8TE85) Grainyhead-like protein 3 homolog (Sister o... 29 8.2
95SSXT_MOUSE (Q62280) SSXT protein (SYT protein) (Synovial sarcoma... 29 8.2
96SECB_PELUB (Q4FNS8) Protein-export protein secB 29 8.2
97K0853_HUMAN (Q5T200) Protein KIAA0853 29 8.2
98TSNA1_HUMAN (Q96NA8) t-SNARE domain-containing protein 1 29 8.2
99ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing pro... 29 8.2
100SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB) (He... 29 8.2
101MINK1_MOUSE (Q9JM52) Misshapen-like kinase 1 (EC 2.7.11.1) (Mito... 29 8.2 
>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score =  345 bits (885), Expect(2) = 3e-95
 Identities = 159/180 (88%), Positives = 167/180 (92%), Gaps = 1/180 (0%)
 Frame = +2

Query: 32  GSFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSR 211
           GSFIPSPRWQ+PSNY PMIVPQGLVQVPSWNSY GQM+PVSS ESRLQSPGAQQ YGTS+
Sbjct: 237 GSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQ 296

Query: 212 QGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFH 391
           Q + SAGNQGM SPYRSSS+PVPQYALQRENVFPERPDQPEC YY+KTGDCKFGAVCKFH
Sbjct: 297 QVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFH 356

Query: 392 HPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP-MAAPMGVYAYG 568
           HPRVRS P PDC+LSP+GLPLRPGEELCKFYSRYGICKFG NCKFDHP MA PMGVYAYG
Sbjct: 357 HPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYG 416



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 41/76 (53%), Positives = 51/76 (67%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  QPEC YY+KTG CKFG  CKFHHPR ++       L+ +G PLRP E+ C +Y 
Sbjct: 122 YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYL 181

Query: 488 RYGICKFGVNCKFDHP 535
           + G CK+G  CKF HP
Sbjct: 182 KTGQCKYGNTCKFHHP 197



 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 32/76 (42%), Positives = 47/76 (61%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  +P+C YY++TG C+FG  C+F+HP+ R+       +     P R G+  C++Y 
Sbjct: 77  YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYYL 135

Query: 488 RYGICKFGVNCKFDHP 535
           + G CKFG  CKF HP
Sbjct: 136 KTGTCKFGPTCKFHHP 151



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP 460
           +P RP + EC YY+KTG CK+G  CKFHHP +      + + S  G P+ P
Sbjct: 168 YPLRPSEKECAYYLKTGQCKYGNTCKFHHPELF-----NAMASSRGSPIYP 213



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +2

Query: 431 LSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
           + P   P R GE  C +Y R G+C+FG++C+F+HP
Sbjct: 72  MQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 106



 Score = 23.5 bits (49), Expect(2) = 3e-95
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 1   GTMASWTYPXRFFHSKP 51
           GTMASW +P   F   P
Sbjct: 227 GTMASWAFPRGSFIPSP 243
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>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
          Length = 417

 Score =  248 bits (633), Expect = 9e-66
 Identities = 116/178 (65%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
 Frame = +2

Query: 35  SFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQ 214
           S++PSPRWQ PS+Y P+I+PQG+V VP W++Y GQM      ES  Q+    Q YGTS Q
Sbjct: 187 SYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQM----GSESPQQTMRNDQTYGTSHQ 242

Query: 215 GE-GSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFH 391
           GE  +AG QG  S YRS S PV  YALQR+N+FPERPDQPEC +Y+KTGDCKFGAVC+FH
Sbjct: 243 GELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFH 302

Query: 392 HPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAY 565
           HPR R  P PDC+LSP+GLPLRPGE LC FYSRYGICKFG +CKFDH    PMG++ Y
Sbjct: 303 HPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDH----PMGIFTY 356



 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 43/81 (53%), Positives = 52/81 (64%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           FPER  QPEC YY+KTG CKFGA C+FHHP+ ++       L+ +G PLRP E    +Y 
Sbjct: 72  FPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYL 131

Query: 488 RYGICKFGVNCKFDHPMAAPM 550
           R G CKFG  CKF HP  + M
Sbjct: 132 RTGQCKFGNTCKFHHPQPSNM 152



 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
 Frame = +2

Query: 275 VPQYALQRENV----------FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPD 424
           +PQ A+ + N+          +PE P +P+C YYI+TG C+FGA C+F+HP  R      
Sbjct: 6   IPQEAMWQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAT 65

Query: 425 CILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
             +     P R G+  C++Y + G CKFG  C+F HP
Sbjct: 66  ARMKG-EFPERLGQPECQYYLKTGTCKFGATCRFHHP 101
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>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
          Length = 397

 Score =  209 bits (532), Expect = 4e-54
 Identities = 104/173 (60%), Positives = 119/173 (68%), Gaps = 5/173 (2%)
 Frame = +2

Query: 35  SFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQ 214
           SFI SPRWQ PS+Y  +I+PQG+V V  WN Y GQ+  VS         G  Q Y   +Q
Sbjct: 180 SFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSP-----SGTGNDQNYRNLQQ 234

Query: 215 GE---GSAGNQGMQSPYR-SSSFPVP-QYALQRENVFPERPDQPECIYYIKTGDCKFGAV 379
            E     + +QG  S Y   SS P+   YAL RENVFPERP QPEC +Y+KTGDCKFG V
Sbjct: 235 NETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTV 294

Query: 380 CKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           CKFHHPR R  PPPDC+LS +GLPLRPGE LC FY+RYGICKFG +CKFDHPM
Sbjct: 295 CKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 42/80 (52%), Positives = 51/80 (63%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  QPEC YY+KTG CKFG  CKFHHPR ++       L+ +G PLR  E  C ++ 
Sbjct: 82  YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 141

Query: 488 RYGICKFGVNCKFDHPMAAP 547
           R G CKFG  CKF+HP   P
Sbjct: 142 RTGHCKFGGTCKFNHPQPQP 161



 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL----PLRPGEELC 475
           +PERP +P+C YYI+TG C+FG+ C+F+HPR R     + +++   +    P R G+  C
Sbjct: 37  YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDR-----ELVIATARMRGEYPERIGQPEC 91

Query: 476 KFYSRYGICKFGVNCKFDHP 535
           ++Y + G CKFGV CKF HP
Sbjct: 92  EYYLKTGTCKFGVTCKFHHP 111
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>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score =  167 bits (424), Expect = 1e-41
 Identities = 79/124 (63%), Positives = 89/124 (71%)
 Frame = +2

Query: 167 RLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYY 346
           RLQ P      G +   +G   + G  S    +S P+  YAL RENVFPERP QPEC +Y
Sbjct: 201 RLQDPS-----GFASGSQGGLFSSGFHS---GNSVPLGFYALPRENVFPERPGQPECQFY 252

Query: 347 IKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKF 526
           +KTGDCKFG VCKFHHPR R  PPPDC+LS +GLPLRPGE LC FYSRYGICKFG +CKF
Sbjct: 253 MKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKF 312

Query: 527 DHPM 538
           DHPM
Sbjct: 313 DHPM 316



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  QPEC +Y+KTG CKFG  CKFHHPR ++       ++ +  PLRP E+ C ++ 
Sbjct: 84  YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143

Query: 488 RYGICKFGVNCKFDHP 535
           R G CKFG  CKF+HP
Sbjct: 144 RIGQCKFGGTCKFNHP 159



 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  +P+C YYI+TG C+FG+ C+F+HP  R        +     P R G+  C+FY 
Sbjct: 39  YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYL 97

Query: 488 RYGICKFGVNCKFDHP 535
           + G CKFGV CKF HP
Sbjct: 98  KTGTCKFGVTCKFHHP 113



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 16/34 (47%), Positives = 26/34 (76%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRS 409
           +P RP++ +C Y+++ G CKFG  CKF+HP+ +S
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQS 163
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>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score =  159 bits (402), Expect = 5e-39
 Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 2/179 (1%)
 Frame = +2

Query: 8   WQVGL--IQXGSFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSP 181
           WQ+G   +  GSF+         +Y PM++P  +V +  WN Y   +  V+S     Q+ 
Sbjct: 203 WQMGRPPVLPGSFLSG-------SYPPMMLPSTVVPMQGWNPYISPVNQVASAGGH-QTV 254

Query: 182 GAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGD 361
            A  +YG S QG  +A   G Q    SSS  +P  + ++E  FP RP QPEC YY+KTG 
Sbjct: 255 QAGPFYGLSHQGPSAAVTYGSQYAPLSSS-TMPSSSSKQEPAFPARPGQPECQYYLKTGS 313

Query: 362 CKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           CKFG+ CK+HHP+  + P  +C+LSP+GLPLRPG + C +Y+++G CKFG  CKFDHPM
Sbjct: 314 CKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPM 372



 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PERP QP C YY+K G CKFG+ CK+ HPR  S      +L+  G PLR GE+ C +Y 
Sbjct: 98  YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA--VMLNSSGYPLRSGEKDCTYYV 155

Query: 488 RYGICKFGVNCKFDHP 535
           + G CKFG  CKF HP
Sbjct: 156 KTGHCKFGSTCKFHHP 171



 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
 Frame = +2

Query: 311 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMG-------LPLRPGEE 469
           PERP + +C+YY++TG C +G  C+++HPR R+      +L+  G        P RPG+ 
Sbjct: 49  PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAA---AVLNGGGKTTHSAEYPERPGQP 105

Query: 470 LCKFYSRYGICKFGVNCKFDHP 535
           +C++Y + G CKFG NCK+DHP
Sbjct: 106 VCEYYMKNGTCKFGSNCKYDHP 127



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = +2

Query: 281 QYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRV 403
           Q  +   + +P R  + +C YY+KTG CKFG+ CKFHHP +
Sbjct: 133 QAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEI 173



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +2

Query: 446 LPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
           LP RPGE  C +Y R G C +G NC+++HP
Sbjct: 48  LPERPGEADCVYYLRTGACGYGENCRYNHP 77
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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score =  159 bits (401), Expect = 7e-39
 Identities = 78/156 (50%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
 Frame = +2

Query: 74  YTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYG-TSRQGEGSAGNQGMQS 250
           Y PM++  G+V +P W+ Y       S+P S   SPGAQ   G TS  G     +     
Sbjct: 214 YGPMLLTPGVVPIPGWSPY-------SAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSL 266

Query: 251 PYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCI 430
           P    S   P   +Q+E  FPERP +PEC YY+KTGDCKFG  CKFHHPR R  P  +C+
Sbjct: 267 PGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCV 326

Query: 431 LSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           LSP+GLPLRPG + C FY + G CKFG  CKFDHPM
Sbjct: 327 LSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 362



 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 47/128 (36%), Positives = 66/128 (51%)
 Frame = +2

Query: 161 ESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECI 340
           +S  + PGA       R G    GN+   +  R  +    +  ++    +PER  +P C 
Sbjct: 40  DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASV--EATVRATGQYPERFGEPPCQ 97

Query: 341 YYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNC 520
           +Y+KTG CKFGA CKFHHP+          L+  G P+R G+  C +Y + G CKFG+ C
Sbjct: 98  FYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITC 157

Query: 521 KFDHPMAA 544
           KF HP  A
Sbjct: 158 KFHHPQPA 165
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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score =  146 bits (368), Expect = 5e-35
 Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
 Frame = +2

Query: 8   WQVGL--IQXGSFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSP 181
           WQ+G   +  GS+IP        +YTPM++  G++ +  W+ YP  + PV S  ++ Q+ 
Sbjct: 211 WQMGRPPVVPGSYIPG-------SYTPMMLSSGMIPLQGWSPYPASVNPVVSGGAQ-QNV 262

Query: 182 GAQQYYGTSRQGEGSA-GNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTG 358
            A   YG    G  S     G   PY SS+        Q+E+ FPERP QP+C YY++TG
Sbjct: 263 QAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNN--QQEHGFPERPGQPDCQYYMRTG 320

Query: 359 DCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           DCKFGA CK+HHPR  S P    +++ + LPLRPG + C +Y++ G C++GV CK+DHPM
Sbjct: 321 DCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 39/76 (51%), Positives = 49/76 (64%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PER  QP C YY+KTG CKFG  CK+HHP+      P  +L+  G P+R GE+ C +Y 
Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP-VMLNNSGFPIRLGEKECSYYM 163

Query: 488 RYGICKFGVNCKFDHP 535
           + G CKFG  CKF HP
Sbjct: 164 KTGQCKFGTTCKFHHP 179



 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = +2

Query: 152 SSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQP 331
           +SP++ L+ P  +   G    G G  G     +  R                 PERP + 
Sbjct: 20  ASPDTGLEGPMWRMGLGGGGGGGGGGGGGDGDAAGR----------------LPERPGEE 63

Query: 332 ECIYYIKTGDCKFGAVCKFHHPRVRSQPP---PDCILSPMGLPLRPGEELCKFYSRYGIC 502
           +C+YY++TG C FG  C+++HPR R            + +  P R G+ +C++Y + G C
Sbjct: 64  DCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTC 123

Query: 503 KFGVNCKFDHP 535
           KFG NCK+ HP
Sbjct: 124 KFGTNCKYHHP 134



 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 24/48 (50%), Positives = 27/48 (56%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLP 451
           FP R  + EC YY+KTG CKFG  CKFHHP     P    I  P+  P
Sbjct: 150 FPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSP 197
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>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score =  132 bits (331), Expect = 9e-31
 Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
 Frame = +2

Query: 11  QVGLIQXG-SFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGA 187
           Q GL+    SF+     QSP    PM++P G+V    WN Y   +  + SP ++  S G+
Sbjct: 189 QYGLVLTRPSFLTGSYLQSPYG-PPMVLPPGMVPYSGWNPYQASLSAMPSPGTQ-PSIGS 246

Query: 188 QQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCK 367
              YG +     +    G      SS+             FP+RPDQPEC Y+++TGDCK
Sbjct: 247 SSIYGLTPLSPSATAYTGTYQSVPSSN--------STSKEFPQRPDQPECQYFMRTGDCK 298

Query: 368 FGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAP 547
           FG+ C++HHP     P    +LS +GLPLRPG   C  ++++GICKFG  CKFDH M++ 
Sbjct: 299 FGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSS 358

Query: 548 M 550
           +
Sbjct: 359 L 359



 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +2

Query: 311 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVR----SQPPPDCILSPMGLPLRPGEELCK 478
           PER   P C ++++TG CKFGA CK+HHPR      S  P    LS +G PLRPGE+ C 
Sbjct: 73  PERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVS--LSYLGYPLRPGEKECS 130

Query: 479 FYSRYGICKFGVNCKFDHPM 538
           +Y R G CKFG+ C+F+HP+
Sbjct: 131 YYLRTGQCKFGLTCRFNHPV 150



 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           +PERPD+P+CIYY++TG C +G+ C+F+HPR R             LP R G  +C+ + 
Sbjct: 26  YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFM 85

Query: 488 RYGICKFGVNCKFDHP 535
           R G CKFG +CK+ HP
Sbjct: 86  RTGTCKFGASCKYHHP 101



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHP-RVRSQPPP 421
           +P RP + EC YY++TG CKFG  C+F+HP  +  Q PP
Sbjct: 120 YPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPP 158
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>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 465

 Score =  129 bits (325), Expect = 4e-30
 Identities = 65/168 (38%), Positives = 91/168 (54%)
 Frame = +2

Query: 41  IPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGE 220
           +P    QSP  Y  M++P G+V    WN Y   +  + SP ++  S G    YG +    
Sbjct: 218 LPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQ-PSMGTSSVYGITPLSP 276

Query: 221 GSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPR 400
            +   Q         S P       +E  FP+RP+QPEC Y+++TGDCKFG  C+FHHP 
Sbjct: 277 SAPAYQ---------SGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHP- 326

Query: 401 VRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAA 544
           + +  P    LS +GLPLRPG   C  ++++GICKFG  CKFDH + +
Sbjct: 327 MEAASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGS 374



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRV--RSQPPPDCILSPMGLPLRPGEELCKF 481
           FPER  QP C ++++TG CKFGA CK+HHPR            L+ MG PLRPGE+ C +
Sbjct: 94  FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSY 153

Query: 482 YSRYGICKFGVNCKFDHPMAAPMGVYA 562
           + R G CKFG  C++ HP+  P GV A
Sbjct: 154 FMRTGQCKFGSTCRYHHPV--PPGVQA 178



 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 35/76 (46%), Positives = 50/76 (65%)
 Frame = +2

Query: 308 FPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYS 487
           FPERPD+P+CIYY++TG C +G+ C+F+HPR R+             P R G+ +C+ + 
Sbjct: 48  FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFM 107

Query: 488 RYGICKFGVNCKFDHP 535
           R G CKFG +CK+ HP
Sbjct: 108 RTGTCKFGASCKYHHP 123
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>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
           ZFN-like 6
          Length = 448

 Score =  125 bits (313), Expect = 1e-28
 Identities = 77/191 (40%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
 Frame = +2

Query: 23  IQXGSFIP-------SPRWQSPS--NYTPMIVPQGLVQV-------PSWNSYPGQMVPVS 154
           +  G+F P       S  W SP   N T   +P  L Q        P WN Y      V 
Sbjct: 249 VSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQAS---VY 305

Query: 155 SPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPE 334
           S E  + SP       T      SA    + S YR    P  +        FPERPDQPE
Sbjct: 306 SSERGVFSPST-----TYLMNNSSAETSMLLSQYRHQ-MPAEE--------FPERPDQPE 351

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGV 514
           C YY+KTGDCKF   CK+HHP+ R    P   L+  GLPLRP + +C +YSRYGICKFG 
Sbjct: 352 CSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGP 411

Query: 515 NCKFDHPMAAP 547
            C+FDH +  P
Sbjct: 412 ACRFDHSVQPP 422



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = +2

Query: 281 QYALQRENVFPERPDQP------ECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPM 442
           ++ + R+N   E+ D        +C YY +TG CK+G  C+F+H   +S       L+ +
Sbjct: 140 KFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFL 199

Query: 443 GLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMG 553
           GLPLRPGE  C +Y R G CK+G  CKF+HP    +G
Sbjct: 200 GLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIG 236



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 449 PLRPGEELCKFYSRYGICKFGVNCKFDHPMA 541
           P+RPG E C FY R G CKFG +CKF+HP+A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
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>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
          Length = 435

 Score =  115 bits (289), Expect = 7e-26
 Identities = 61/138 (44%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
 Frame = +2

Query: 143 VPVSSPESRLQSPGAQQY--------YGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQR 298
           +P   P SR  +P A  +        Y   R     +  Q   S   +SSF   Q+ +  
Sbjct: 269 IPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSV 328

Query: 299 ENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCK 478
           E  FPERPDQPEC YY+KTGDCKF   CK+HHP+ R         +  GLPLRP + +C 
Sbjct: 329 EE-FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCT 387

Query: 479 FYSRYGICKFGVNCKFDH 532
            YSRYGICKFG  C+FDH
Sbjct: 388 HYSRYGICKFGPACRFDH 405



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 38/80 (47%), Positives = 50/80 (62%)
 Frame = +2

Query: 314 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRY 493
           E P   EC YY +TG CK+G  C+F H +  + P     L+ +GLP+RPGE+ C FY R 
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206

Query: 494 GICKFGVNCKFDHPMAAPMG 553
           G CKFG +CKF+HP    +G
Sbjct: 207 GSCKFGSDCKFNHPDPTAIG 226



 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +2

Query: 440 MGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           M  P+RP  E C FY R G CK+G +CKF+HP+
Sbjct: 96  MVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPV 128



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +2

Query: 311 PERPDQPECIYYIKTGDCKFGAVCKFHHP 397
           P RP + EC +Y++ G CKFG+ CKF+HP
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHP 220



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 449 PLRPGEELCKFYSRYGICKFGVNCKFDHP 535
           P RP +  C +Y + G CKF   CK+ HP
Sbjct: 332 PERPDQPECTYYLKTGDCKFKYKCKYHHP 360
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>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score =  108 bits (269), Expect = 1e-23
 Identities = 60/176 (34%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
 Frame = +2

Query: 17  GLIQXGSFIPSPRWQSPSNYTPMIVP--QGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQ 190
           GL    ++   PR Q P +Y P++V   QG +    W  Y                  + 
Sbjct: 186 GLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMA---------------ASN 230

Query: 191 QYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKF 370
             Y    Q            PY S S      A+       E  DQPEC +++ TG CK+
Sbjct: 231 SMYNVKNQ------------PYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKY 278

Query: 371 GAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           G  CK+ HP VR   PP  +++P  LP RPG+  C  +  YG CKFG NCKFDHPM
Sbjct: 279 GDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334



 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 44/98 (44%), Positives = 60/98 (61%)
 Frame = +2

Query: 275 VPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPL 454
           +PQ     +   PER  QP+C Y++KTG CK+G  CK+HHP+ R+   P  + + +GLP+
Sbjct: 76  LPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPM 134

Query: 455 RPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYG 568
           R GE+ C +Y R G C+FGV CKF HP        AYG
Sbjct: 135 RLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYG 172



 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 449 PLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAY 565
           P RPGE  C+FY R G+C +G +C+++HP   P  V  Y
Sbjct: 45  PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYY 83
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>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
          Length = 453

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 56/168 (33%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = +2

Query: 41  IPSPRWQSPSNYTP-MIVP-QGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQ 214
           IP P+      Y P M+ P QGL+    W +Y     P+ + +++L S            
Sbjct: 197 IPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDS------------ 244

Query: 215 GEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHH 394
                          SSS  V        + F ER    EC +++ TG CK+G  CK+ H
Sbjct: 245 ---------------SSSASVAVTVTSHHHSFSERA---ECRFFMNTGTCKYGDDCKYSH 286

Query: 395 PRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPM 538
           P+ R    P  +L+P+ LP RPG+  C  +  YG CKFG NCKFDH M
Sbjct: 287 PKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSM 334



 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 45/119 (37%), Positives = 65/119 (54%)
 Frame = +2

Query: 179 PGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTG 358
           PG +      R G+   GN      Y      +PQ  +   +  PER  QP+C    +TG
Sbjct: 45  PGERDCQFFLRTGQCGYGNS---CRYNHPLTNLPQGIIYYRDQLPERVGQPDC----ETG 97

Query: 359 DCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
            CK+G  CK+HHP+ R+   P  + + +GLP+R GE+ C +Y + G+C+FGV CKF HP
Sbjct: 98  ACKYGPTCKYHHPKDRNGAGP-VLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = +2

Query: 311 PERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           P R  +  C YY++TG C+FG  CKFHHP   SQP
Sbjct: 127 PMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQP 161



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +2

Query: 449 PLRPGEELCKFYSRYGICKFGVNCKFDHPMA-APMGVYAY 565
           P RPGE  C+F+ R G C +G +C+++HP+   P G+  Y
Sbjct: 42  PDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYY 81
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>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
 Frame = +2

Query: 65  PSNYTPMIVPQGLVQVPSWNSYPGQ--MVPVSSPESRLQSPGAQQYYGTSRQ----GEGS 226
           P +  P+I P   +  P W   P +  + P SSP  R        ++G + +    G G 
Sbjct: 63  PGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGR-------GWWGVNAEPPFPGPGH 115

Query: 227 AG------NQGMQSPYRSSSFPVPQYALQREN---VFPERPDQPECIYYIKTGDCKFGAV 379
            G      ++  ++P R  S+ + +     ++   V  ++ D+P C ++ K G C++  +
Sbjct: 116 GGPTRGSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDL 175

Query: 380 CKFHHPRVRSQP 415
           C F+HP V   P
Sbjct: 176 CAFYHPGVNGPP 187
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>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
 Frame = +2

Query: 65  PSNYTPMIVPQGLVQVPSWNSYPGQ--MVPVSSPESRLQSPGAQQYYGTSRQ----GEGS 226
           P +  P+I P   +  P W   P +  + P SSP  R        ++G + +    G G 
Sbjct: 63  PGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSPYGR-------GWWGVNAEPPFPGPGH 115

Query: 227 AG------NQGMQSPYRSSSFPVPQYALQREN---VFPERPDQPECIYYIKTGDCKFGAV 379
            G      ++  ++P R  S+ + +     ++   V  ++ D+P C ++ K G C++  +
Sbjct: 116 GGPTRGSFHKEQRNPRRLKSWSLIKNTCPPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDL 175

Query: 380 CKFHHPRVRSQP 415
           C F+HP V   P
Sbjct: 176 CAFYHPGVNGPP 187
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>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
          Length = 423

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G C+ G+ C F H    S+P                  +CKFY R G+C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLNNSKP----------------STICKFYQR-GVCA 46

Query: 506 FGVNCKFDH 532
           +G  C++DH
Sbjct: 47  YGERCRYDH 55
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>MKRN2_MOUSE (Q9ERV1) Makorin-2|
          Length = 416

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y + G C 
Sbjct: 5   QVTCRYFMH-GVCREGSQCLFSHDLANSKP----------------STICKYYQK-GYCA 46

Query: 506 FGVNCKFDH--PMAAPMG 553
           +G  C++DH  P AA  G
Sbjct: 47  YGARCRYDHTKPPAAAGG 64
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>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)|
          Length = 416

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y + G C 
Sbjct: 5   QITCRYFMH-GVCREGSQCLFSHDLANSKP----------------STICKYYQK-GYCA 46

Query: 506 FGVNCKFDH--PMAAPMG 553
           +G  C++DH  P AA  G
Sbjct: 47  YGTRCRYDHTRPSAAAGG 64
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>MKRN2_BRARE (Q9DFG8) Makorin-2|
          Length = 414

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G C+ G+ C F H    S+P                  +CK+Y R G C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLTTSKP----------------STICKYYQR-GACA 46

Query: 506 FGVNCKFDH 532
           +G  C++DH
Sbjct: 47  YGDRCRYDH 55
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>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +2

Query: 353 TGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 532
           +G C++G+ C+F H     + PP           +   E C+ +  YG C +G+ C F H
Sbjct: 338 SGTCRYGSKCQFAHGNQELKEPPR--------HPKYKSERCRSFMMYGYCPYGLRCCFLH 389
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>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56) (Fragment)
          Length = 131

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
 Frame = +2

Query: 65  PSNYTPMIVPQGLVQVPSWNSYP--GQMVPVSSPESR-LQSPGAQQYYGTSRQGEGSAG- 232
           P +  PMI P   +  P     P  G + P S P  R      A+  +     G  S G 
Sbjct: 6   PGSRGPMIPPLLSLPPPPRGRGPLRGGLGPRSGPYGRGWWGVNAEPPFPGPGHGGPSRGG 65

Query: 233 -NQGMQSPYRSSSFPVPQYALQREN---VFPERPDQPECIYYIKTGDCKFGAVCKFHHPR 400
            ++  ++P R  S+ + +     ++   V  ++ D+P C ++ K G C++  +C F+HP 
Sbjct: 66  FHKEQRNPRRLKSWSLIKNTCPPKDGPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPG 125

Query: 401 VRSQP 415
               P
Sbjct: 126 ANGPP 130
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>LEE1_YEAST (Q02799) Zinc finger protein LEE1|
          Length = 301

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +2

Query: 344 YIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCK 523
           + K G+C+ G+ C F H        PD I S   LP       CK++++ G CKFG  C 
Sbjct: 95  FFKMGNCQAGSSCPFSH-------SPDIISSANNLP-------CKYFAK-GNCKFGNKCV 139

Query: 524 FDH 532
             H
Sbjct: 140 NAH 142
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>PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 186

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
 Frame = +2

Query: 65  PSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQ----GEGSAG 232
           P +  PMI P  L+ +P      G +     P S   SP  + ++G + +    G G  G
Sbjct: 61  PGSRGPMIPP--LLSLPPPPRGRGHIRGGLGPRS---SPYGRGWWGVNTEPPFPGPGHGG 115

Query: 233 N------QGMQSPYRSSSFPVPQYALQRENVFP---ERPDQPECIYYIKTGDCKFGAVCK 385
                  Q  ++P R  S+ + +     ++  P   ++ D+P C ++ K G C++   C 
Sbjct: 116 PSREIFYQEPRNPRRLKSWSLVKNTYPPKDSPPMMEDKSDRPVCRHFSKKGHCRYEDHCA 175

Query: 386 FHHPRVRSQP 415
           F+HP V   P
Sbjct: 176 FYHPGVNGPP 185



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 41/165 (24%), Positives = 59/165 (35%), Gaps = 13/165 (7%)
 Frame = +2

Query: 80  PMIVPQGLVQVPSWNSYPGQMVPV---SSPESR-------LQSPGAQQYYGTSRQGEG-- 223
           PM  P  L   P  N  PG    V     P SR       L  P   +  G  R G G  
Sbjct: 32  PMGPPSLLGPPPMANGKPGDPKSVFHRGPPGSRGPMIPPLLSLPPPPRGRGHIRGGLGPR 91

Query: 224 -SAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPR 400
            S   +G         FP P +      +F + P  P  +        K  ++ K     
Sbjct: 92  SSPYGRGWWGVNTEPPFPGPGHGGPSREIFYQEPRNPRRL--------KSWSLVK----- 138

Query: 401 VRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
             + PP D   SP  +  +    +C+ +S+ G C++  +C F HP
Sbjct: 139 -NTYPPKD---SPPMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 179
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>SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
          Length = 3658

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -1

Query: 323  QVSQEIHSLSAVHTEVQEMNWICRVIAFPDFLHCL-----HLVEKFHSIVELLETVVD 165
            + S+ +H  + V+T +QE+N   R I FP+ L CL      L    H +  L+E   D
Sbjct: 2837 EASEAVHLANGVYTSLQELNSNFRQIIFPEALRCLMKGECTLESMLHELDSLIEQTTD 2894
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>CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (NS1 effector
           domain-binding protein 1) (Neb-1) (No arches homolog)
          Length = 269

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = +2

Query: 329 PECIYYIKTGDCKFGAVCKFHH----PRVRSQPPPD---CILSPMGLPLRPGEELCKFYS 487
           PEC +Y K G+C     C F H     +++  P  D   C   P+         +C  Y 
Sbjct: 94  PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYL 152

Query: 488 RYGICKFGVNCKFDHP-MAAPMG 553
             G C  G +CKF HP    PMG
Sbjct: 153 -VGFCPEGPSCKFMHPRFELPMG 174
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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +2

Query: 239 GMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHH 394
           G++  Y ++ F   +     +NV    P+   C +Y+K G+CKFG+ CKF H
Sbjct: 275 GLELDYLTNKFCKSKQKESSKNVRDTSPET--CKFYLK-GNCKFGSKCKFKH 323



 Score = 32.7 bits (73), Expect = 0.74
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           E CKFY + G CKFG  CKF H
Sbjct: 303 ETCKFYLK-GNCKFGSKCKFKH 323
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>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 190

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 314 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           ++ D+P C ++ K G C++   C F+HP V   P
Sbjct: 156 DKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNGPP 189



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 413 PPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHP 535
           PP D   SP  +  +    +C+ +S+ G C++  +C F HP
Sbjct: 146 PPKD---SPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 183
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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 940

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 17/83 (20%), Positives = 33/83 (39%)
 Frame = +2

Query: 173  QSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIK 352
            + P   ++ G    G G  G++G    +                   +  ++P C +++ 
Sbjct: 873  RGPPPHEHRGHDGPGHGGGGHRGHDGGHSHGG---------------DMSNRPVCRHFMM 917

Query: 353  TGDCKFGAVCKFHHPRVRSQPPP 421
             G+C++   C F+HP V   P P
Sbjct: 918  KGNCRYENNCAFYHPGVNGPPLP 940
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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (Phosphatase 1 nuclear targeting subunit) (MHC class I
            region proline-rich protein CAT53) (FB19 protein)
            (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 17/83 (20%), Positives = 33/83 (39%)
 Frame = +2

Query: 173  QSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIK 352
            + P   ++ G    G G  G++G    +                   +  ++P C +++ 
Sbjct: 873  RGPPPHEHRGHDGPGHGGGGHRGHDGGHSHGG---------------DMSNRPVCRHFMM 917

Query: 353  TGDCKFGAVCKFHHPRVRSQPPP 421
             G+C++   C F+HP V   P P
Sbjct: 918  KGNCRYENNCAFYHPGVNGPPLP 940
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>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
            (hSMG-1) (Lambda/iota protein kinase C-interacting
            protein) (Lambda-interacting protein) (61E3.4)
          Length = 3657

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -1

Query: 323  QVSQEIHSLSAVHTEVQEMNWICRVIAFPDFLHCL-----HLVEKFHSIVELLETVVD 165
            + S+ +H  + V+T +QE+N   R I FP+ L CL      L    H +  L+E   D
Sbjct: 2835 EASETVHLANGVYTSLQELNSNFRQIIFPEALRCLMKGEYTLESMLHELDGLIEQTTD 2892
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>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2|
          Length = 1208

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 131 PGQMVPV-SSPESRLQSPGAQQYYGTSRQGE----GSAGNQGMQSPYRSSSFPVPQYALQ 295
           PG + PV SSP S   SP A    G + +GE    GSAG+     P+  SSFP     L 
Sbjct: 462 PGTVPPVPSSPPSSPSSPTALPPSGRATRGEALFGGSAGSSSELEPFSLSSFP----DLM 517

Query: 296 RENVFPERPDQP 331
            E +  E P  P
Sbjct: 518 GELISDEAPGVP 529
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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 925

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 17/83 (20%), Positives = 32/83 (38%)
 Frame = +2

Query: 173  QSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIK 352
            + P   ++ G    G G  G++G    +                   +   +P C +++ 
Sbjct: 858  RGPPPHEHRGHDGPGHGGGGHRGHDGGHNHGG---------------DMSKRPVCRHFMM 902

Query: 353  TGDCKFGAVCKFHHPRVRSQPPP 421
             G+C++   C F+HP V   P P
Sbjct: 903  KGNCRYENNCAFYHPGVNGPPLP 925
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>LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1|
          Length = 676

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/78 (32%), Positives = 30/78 (38%)
 Frame = +2

Query: 41  IPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGE 220
           + SP+W      +P I   GL     W S PG   P+  P         Q    +SR  E
Sbjct: 185 LASPKWGDKPGVSPSI---GLSVGSGWPSSPGSDPPLPKPCGDHPLNHRQLSLSSSRSSE 241

Query: 221 GSAGNQGMQSPYRSSSFP 274
           GS G Q      RSS  P
Sbjct: 242 GSLGGQNSGIGGRSSEKP 259
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>MKRN1_MOUSE (Q9QXP6) Makorin-1|
          Length = 481

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G CK G  C++ H         D   SP G+       +CK++ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYGV-------VCKYFQR-GYCV 99

Query: 506 FGVNCKFDH 532
           +G  C+++H
Sbjct: 100 YGDRCRYEH 108



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 482 YSRYGICKFGVNCKFDHPMA-APMGV 556
           Y  +G+CK G NC++ H ++ +P GV
Sbjct: 63  YFMHGVCKEGDNCRYSHDLSDSPYGV 88
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>NUM1_YEAST (Q00402) Nuclear migration protein NUM1|
          Length = 2748

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +3

Query: 204  LLDKVKAVQEIRECNHPTDPVHFLYLSMHCRERMYFLR-DLINRNAYTT*R--LETVNLV 374
            L+D+++  + IR+CNHPT         M   E  + L   L+++N Y+T R  LE  N+ 
Sbjct: 1776 LVDQIEYDETIRKCNHPT--------RMELEESCHHLNLVLLDQNEYSTLREPLENRNVE 1827

Query: 375  QFANSIIPVCVHSLPQTV 428
               N++  +   ++P T+
Sbjct: 1828 DLINTLSKLNYIAIPNTI 1845
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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 19/136 (13%)
 Frame = +2

Query: 182 GAQQYYGTSRQGEGSAGNQ--GMQSPYRSSSFPV----PQYALQREN---------VFPE 316
           G    YGT ++  G  G      ++ +R  SF       Q+ L  +          +   
Sbjct: 93  GGPTSYGTLKEPSGGGGTALLNKENKFRDRSFSENGDRSQHLLHLQQQQKGGGGSQINST 152

Query: 317 RPDQPECIYYIKTGDCKFGAVCKF----HHPRVRSQPPPDCILSPMGLPLRPGEELCKFY 484
           R     C  + ++G CK+G  C+F    H  R  ++ P            +   ELC+ +
Sbjct: 153 RYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP------------KYKTELCRTF 200

Query: 485 SRYGICKFGVNCKFDH 532
              G C +G  C F H
Sbjct: 201 HTIGFCPYGPRCHFIH 216
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>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
 Frame = +2

Query: 290 LQRENVFPERPDQPE---------CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPM 442
           L+R    P  P QP          C  + + G+CK+G  C+F H            L  +
Sbjct: 117 LERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHE--------LRNV 168

Query: 443 GLPLRPGEELCKFYSRYGICKFGVNCKFDH 532
               +   E C+ +   G C +G  C F H
Sbjct: 169 HRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 198
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>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGE---ELCKFYSRYGICK 505
           C  + ++G C++GA C+F H            L  +  P R  +   ELC  +   G C 
Sbjct: 107 CRTFSESGRCRYGAKCQFAHG-----------LGELRQPSRHPKYKTELCHKFYLQGRCP 155

Query: 506 FGVNCKFDH----PMAAP 547
           +G  C F H     +AAP
Sbjct: 156 YGSRCHFIHNPSEDLAAP 173



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +2

Query: 395 PRVRSQPPPDCILSPMGLPL---RPGEELCKFYSRYGICKFGVNCKFDH 532
           PR  S+  P    SP   P    R   ELC+ +S  G C++G  C+F H
Sbjct: 79  PRPSSELSPSPT-SPTATPTTSSRYKTELCRTFSESGRCRYGAKCQFAH 126
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>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11) (Growth
           factor-inducible nuclear protein NUP475) (G0/G1 switch
           regulatory protein 24)
          Length = 326

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 413 PPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 532
           P P    +    P R   ELC+ +S  G C++G  C+F H
Sbjct: 89  PSPTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAH 128



 Score = 32.7 bits (73), Expect = 0.74
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
 Frame = +2

Query: 311 PERPDQPECIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCK 478
           P R     C  + ++G C++GA C+F H     R  ++ P            +   ELC 
Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHP------------KYKTELCH 148

Query: 479 FYSRYGICKFGVNCKFDH----PMAAP 547
            +   G C +G  C F H     +AAP
Sbjct: 149 KFYLQGRCPYGSRCHFIHNPSEDLAAP 175
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>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKF----HHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 502
           C  + ++G CK+G  C+F    H  R  ++ P            +   ELC+ +   G C
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRSLTRHP------------KYKTELCRTFHTIGFC 179

Query: 503 KFGVNCKFDH 532
            +G  C F H
Sbjct: 180 PYGPRCHFIH 189



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ +   G CK+G  C+F H
Sbjct: 130 ELCRPFEESGTCKYGEKCQFAH 151
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>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEELCKFYSRY 493
           C Y+++ G C  G  CKF H     +    C     G   +         E  CKFY   
Sbjct: 278 CKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSG 336

Query: 494 GICKFGVNCKFDH 532
             C  G NCKF H
Sbjct: 337 AKCYQGDNCKFSH 349
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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 323 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 421
           ++P C +++  G+C++   C F+HP V   P P
Sbjct: 840 NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 872
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>R3HD2_MOUSE (Q80TM6) R3H domain-containing protein 2|
          Length = 1044

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 12/141 (8%)
 Frame = +2

Query: 65   PSNYTPMIVP-----QGLVQ---VPSWNSY--PGQMVPVSSPESRLQSPGAQQYYGTSRQ 214
            PS   PM+VP     QG +    VP + S   P Q    S     LQ PG++QY     Q
Sbjct: 692  PSFQQPMLVPASQSVQGGLPTGGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQY--QMPQ 749

Query: 215  GEGSAGNQGMQSPYRSSSFPVPQYALQRENV--FPERPDQPECIYYIKTGDCKFGAVCKF 388
                     M   Y   S   P   + + NV   P+ P  P  + +         + CK+
Sbjct: 750  SPSPCSPPQMSQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPSMVQW---------SHCKY 800

Query: 389  HHPRVRSQPPPDCILSPMGLP 451
            +    R Q P D + SP G P
Sbjct: 801  YSVEQRGQKPGD-LYSPDGSP 820
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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 323  DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 421
            ++P C +++  G+C++   C F+HP V   P P
Sbjct: 908  NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 940
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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 323 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 421
           ++P C +++  G+C++   C F+HP V   P P
Sbjct: 856 NRPVCRHFMMKGNCRYENNCAFYHPGVNGPPLP 888
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>MEX6_CAEEL (Q09436) Zinc finger protein mex-6|
          Length = 467

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = +2

Query: 362 CKFGAVCKFHHPRVRSQPPPDCILSPMGLPLR-PGEE----LCKFYSR--YGICKFGVNC 520
           C  GA CKF H            L    +P R P  +    LCK ++R   G+C +G+ C
Sbjct: 289 CALGARCKFAHGLKE--------LRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRC 340

Query: 521 KFDHP 535
           +F HP
Sbjct: 341 EFVHP 345
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>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11)
          Length = 320

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGV 514
           C  Y ++G C++GA C+F H       P +  L       +   ELC  +   G C +G 
Sbjct: 102 CRTYSESGRCRYGAKCQFAH------GPGE--LRQANRHPKYKTELCHKFYLQGRCPYGS 153

Query: 515 NCKFDH 532
            C F H
Sbjct: 154 RCHFIH 159



 Score = 32.3 bits (72), Expect = 0.97
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ YS  G C++G  C+F H
Sbjct: 100 ELCRTYSESGRCRYGAKCQFAH 121
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>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible|
           protein CMG1)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 508
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 509 GVNCKFDH 532
           G  C F H
Sbjct: 170 GPRCHFIH 177



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ +   G CK+G  C+F H
Sbjct: 118 ELCRPFEENGACKYGDKCQFAH 139
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>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)|
          Length = 338

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 508
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 509 GVNCKFDH 532
           G  C F H
Sbjct: 170 GPRCHFIH 177



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ +   G CK+G  C+F H
Sbjct: 118 ELCRPFEENGACKYGDKCQFAH 139
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>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response|
           factor 1) (ERF-1)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPG--EELCKFYSRYGICKF 508
           C  + + G CK+G  C+F H           I     L   P    ELC+ +   G C +
Sbjct: 120 CRPFEENGACKYGDKCQFAHG----------IHELRSLTRHPKYKTELCRTFHTIGFCPY 169

Query: 509 GVNCKFDH 532
           G  C F H
Sbjct: 170 GPRCHFIH 177



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ +   G CK+G  C+F H
Sbjct: 118 ELCRPFEENGACKYGDKCQFAH 139
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>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPP 421
           +P C +++  G+C++   C F+HP +   P P
Sbjct: 788 RPTCRHFMMKGNCRYENNCAFYHPGINGPPLP 819
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>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
            (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 29/99 (29%), Positives = 40/99 (40%)
 Frame = +2

Query: 47   SPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGS 226
            S +   P+  TP   P     +PS  S P    P+SS    + S GAQ        GEG+
Sbjct: 1413 SEKRYDPAQATPPPPP-----LPSQYSQPAP--PLSSSSLHIHSKGAQ--------GEGN 1457

Query: 227  AGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIY 343
            + +   Q+ Y S   P P  +       P R D P+  Y
Sbjct: 1458 SVSLDFQNSYMSKPDPPPSQSKPATFRPPTREDPPQTFY 1496
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>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11)
          Length = 324

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 502
           C  + ++G C++GA C+F H     R  S+ P            +   ELC  +   G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRHP------------KYKTELCHKFYLQGRC 154

Query: 503 KFGVNCKFDH----PMAAP 547
            +G  C F H     +AAP
Sbjct: 155 PYGSRCHFIHNPSEDLAAP 173



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ +S  G C++G  C+F H
Sbjct: 105 ELCRTFSESGRCRYGAKCQFAH 126
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>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1386

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           E+CKFY + G CKFG  C+F H
Sbjct: 303 EICKFYLK-GNCKFGSKCRFKH 323



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 239 GMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPP 418
           G++  Y +S F   +     +NV  +      C +Y+K G+CKFG+ C+F H     + P
Sbjct: 275 GLELEYLTSRFRKSKPKESTKNV--QENSLEICKFYLK-GNCKFGSKCRFKH-----EVP 326

Query: 419 PDCIL 433
           P+ I+
Sbjct: 327 PNQIV 331
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>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1) (SP2)
          Length = 428

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +2

Query: 398 RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNC--KFDHPMAAP 547
           R+   P P     P  L L      C FY++ G C+FG  C  K D P ++P
Sbjct: 143 RIWQNPEP-----PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSP 189



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           +P C +Y KTG C+FG  C   H    S P
Sbjct: 160 RPSCPFYNKTGACRFGNRCSRKHDFPTSSP 189
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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHP----RVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGIC 502
           C  Y ++G C++GA C+F H     R  ++ P            +   ELC  +   G C
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQANRHP------------KYKTELCHKFYLQGRC 148

Query: 503 KFGVNCKFDH 532
            +G  C F H
Sbjct: 149 PYGSRCHFIH 158



 Score = 32.3 bits (72), Expect = 0.97
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ELC+ YS  G C++G  C+F H
Sbjct: 99  ELCRTYSESGRCRYGAKCQFAH 120
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>MKRN1_MACEU (Q9TT91) Makorin-1|
          Length = 478

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G CK G  C++ H    SQ                   +C++Y R G C 
Sbjct: 54  QVTCRYFMH-GVCKKGNNCRYSHDLSTSQ----------------SAMVCRYYQR-GCCA 95

Query: 506 FGVNCKFDH 532
           +G  C+++H
Sbjct: 96  YGDRCRYEH 104
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>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24|
          Length = 405

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y + G C FG NCKF H
Sbjct: 225 DVCKDYKQTGFCGFGDNCKFLH 246
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>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)|
          Length = 544

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 28/103 (27%), Positives = 39/103 (37%)
 Frame = +2

Query: 95  QGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFP 274
           +G ++      Y G++VP   PE+ LQSP  ++        E  A   GM  P      P
Sbjct: 218 EGAIEFVPGQPYRGRVVPPHGPEAPLQSPAIER--------EHMAMGMGMPMPV-PMPMP 268

Query: 275 VPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRV 403
           VP          P     P C Y  + G C  G  C + H  +
Sbjct: 269 VP---------MPVPMPLPLCRYAAR-GQCLRGDRCAYPHGEI 301
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>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
          Length = 468

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
 Frame = +2

Query: 269 FPVPQYALQRENVFPERPDQPECIYYIK-TGDCKFGAVCKFHHPRVRSQPPPDCILSPMG 445
           FP+P+   Q+   +  R     C+ +      C  GA CKF H     +       +P  
Sbjct: 258 FPIPETDSQQPPNYKTRL----CMMHASGIKPCDMGARCKFAHGLKELRATD----APAR 309

Query: 446 LPLRPGE-ELCKFYSR--YGICKFGVNCKFDHP 535
            P    + +LCK ++R   G C +G+ C+F HP
Sbjct: 310 YPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHP 342
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>ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing protein 8|
          Length = 291

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
 Frame = +2

Query: 314 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEEL 472
           ER  +  C Y+++   C  G  CKF H     +    C     G   R         E  
Sbjct: 190 ERKGKQICKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYP 248

Query: 473 CKFYSRYGICKFGVNCKFDHPMAAP 547
           CKFY     C  G  CKF H    P
Sbjct: 249 CKFYHTGTKCYQGEYCKFSHAPLTP 273
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>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)|
          Length = 285

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
 Frame = +2

Query: 245 QSPYRSSSFPVPQYALQRENVFPERPDQPECIY-------YIKTGDCKFGAVCKFHHPRV 403
           Q P   +SF   + +  +  V  +  + P+ +Y       +   G C +G+ C+F H   
Sbjct: 138 QKPKNDASFSSEKESSAQPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAHGLG 197

Query: 404 RSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVY 559
             +    C         +P    C  + + G C +G  C F H     + VY
Sbjct: 198 ELKVKKSC----KNFRTKP----CVNWEKLGYCPYGRRCCFKHGDDNDIAVY 241
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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-------PLRPGEELCKFYSRY 493
           C Y+++ G C +G  C F H     +    C     G        P   G+  CK Y   
Sbjct: 396 CKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 454

Query: 494 GICKFGVNCKFDH 532
           G C  G +C F H
Sbjct: 455 GNCINGDDCMFSH 467
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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-------PLRPGEELCKFYSRY 493
           C Y+++ G C +G  C F H     +    C     G        P   G+  CK Y   
Sbjct: 395 CKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 453

Query: 494 GICKFGVNCKFDH 532
           G C  G +C F H
Sbjct: 454 GNCINGDDCMFSH 466
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>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24|
          Length = 355

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 182 GAQQYYGTSR-QGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTG 358
           GA+ Y   +R + +G +     + P R ++       ++  ++   +PD   C  Y +TG
Sbjct: 159 GAKSYASFTRTRDDGCSSKMRSRGPIRQTT------TVRTTSLIDYQPDV--CKDYKETG 210

Query: 359 DCKFGAVCKFHHPR 400
            C FG  CKF H R
Sbjct: 211 YCGFGDTCKFLHDR 224



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG  CKF H
Sbjct: 201 DVCKDYKETGYCGFGDTCKFLH 222
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>CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (Clipper homolog)
           (Clipper/CPSF 30K)
          Length = 211

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEE---LCKFYSRYGICK 505
           C ++++ G CK G  C+F H    ++ P     S  G   R       +C  Y   G C 
Sbjct: 68  CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNYL-VGFCP 125

Query: 506 FGVNCKFDHP-MAAPMG 553
            G +CKF HP    PMG
Sbjct: 126 EGPSCKFMHPRFELPMG 142
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>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)|
          Length = 482

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICK 505
           Q  C Y++  G CK G  C++ H    S                P   +CK++ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSHDLSDS----------------PYSVVCKYFQR-GYCI 99

Query: 506 FGVNCKFDH 532
           +G  C+++H
Sbjct: 100 YGDRCRYEH 108
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>SCP3_SCHPO (P41000) Protein scp3|
          Length = 583

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/93 (25%), Positives = 36/93 (38%)
 Frame = +2

Query: 254 YRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCIL 433
           Y  S F     +L R +  P+      C ++ + G C  G  C F H             
Sbjct: 16  YHLSEFNSEATSLTRPS--PKSLQHVPCKFF-RQGTCTSGKNCIFSHD------------ 60

Query: 434 SPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 532
               L L   + +CK++ + G CKFG  C  +H
Sbjct: 61  ----LELATEKTICKYFQK-GNCKFGSKCALEH 88
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>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1177

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +2

Query: 335 CIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEELCKFYSRY 493
           C Y+++ G C  G  CKF+H     +    C     G   +         E  CKFY   
Sbjct: 276 CKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSG 334

Query: 494 GICKFGVNCKFDH 532
             C  G  CKF H
Sbjct: 335 AKCYQGDKCKFSH 347
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>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog|
          Length = 384

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG +CKF H
Sbjct: 179 DICKDYKETGFCTFGDSCKFVH 200
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>YTH1_YEAST (Q06102) Protein YTH1|
          Length = 208

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
 Frame = +2

Query: 329 PECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGL-PLR---PGEELCK-FYSRY 493
           PEC+++ K G C     C++ H    S+  P C    MG  PL    P   + K F  RY
Sbjct: 93  PECVFFSKNGYCTQSPDCQYLHIDPASK-IPKCENYEMGFCPLGSSCPRRHIKKVFCQRY 151

Query: 494 --GICKFGVN-CKFDHP 535
             G C  G + C  +HP
Sbjct: 152 MTGFCPLGKDECDMEHP 168
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>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
           finger protein 64)
          Length = 485

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 482 YSRYGICKFGVNCKFDHPMA 541
           Y +YGICK G NC++ H ++
Sbjct: 98  YFKYGICKEGDNCRYSHDLS 117
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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 323 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 168 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 198



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 473 CKFYSRYGICKFGVNC--KFDHPMAAP 547
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTSSP 198
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>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1)
          Length = 479

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 323 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 173 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 203



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 473 CKFYSRYGICKFGVNC--KFDHPMAAP 547
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTSSP 203
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>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2)
          Length = 462

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 323 DQPECIYYIKTGDCKFGAVCKFHHPRVRSQP 415
           D+  C +Y KTG C+FG  C   H    S P
Sbjct: 172 DRANCPFYSKTGACRFGDRCSRKHNFPTSSP 202



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 473 CKFYSRYGICKFGVNC--KFDHPMAAP 547
           C FYS+ G C+FG  C  K + P ++P
Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTSSP 202
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>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 224 SAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAV 379
           S G Q  QSP RS S P P+    R +    RP  P   Y ++   C   A+
Sbjct: 190 SVGLQSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSAL 241
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>DDX20_MOUSE (Q9JJY4) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)|
           (DEAD box protein 20) (DEAD box protein DP 103)
           (Component of gems 3) (Gemin-3) (Regulator of
           steroidogenic factor 1) (ROSF-1)
          Length = 825

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +2

Query: 77  TPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPY 256
           TP+  P  L QV + N  P Q+    +PE++++   A+   G +++ + S  N   +S Y
Sbjct: 689 TPVGGPLSLEQVQNGNDTPTQVEYQEAPETQVK---ARHKEGANQRSKQSRRNPARRSSY 745

Query: 257 RSSSFP 274
           R  S P
Sbjct: 746 RVQSEP 751
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>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 128 YPGQMVPVSSPESRLQSPGAQQYYGTSRQ--GEGSAGNQGMQSPYRSS 265
           YPGQ  P    + +    G Q YY TS Q  G+     QG Q  Y +S
Sbjct: 125 YPGQASPQRPGQGQQPGQGQQGYYPTSPQQPGQWQQPEQGQQGYYPTS 172
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>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)|
          Length = 322

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG +CKF H
Sbjct: 194 DICKDYKETGFCGFGDSCKFLH 215
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>ZN183_BOVIN (Q67ER4) Zinc finger protein 183|
          Length = 343

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG +CKF H
Sbjct: 200 DICKDYKETGFCGFGDSCKFLH 221
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>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)|
          Length = 343

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG +CKF H
Sbjct: 200 DICKDYKETGFCGFGDSCKFLH 221
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>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24|
          Length = 332

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 ELCKFYSRYGICKFGVNCKFDH 532
           ++CK Y   G C FG +CKF H
Sbjct: 166 DVCKDYKLTGYCGFGDSCKFSH 187
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>PACC_ASPNG (Q00203) pH-response transcription factor pacC/RIM101|
          Length = 667

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +2

Query: 35  SFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSP 181
           S +P+P   SPS  TP + P    Q     SY     PVS P +   SP
Sbjct: 398 SMMPNPATHSPSTGTPALTPPSSAQ-----SYTSGRSPVSLPSATRVSP 441
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>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24|
          Length = 232

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 22/83 (26%), Positives = 33/83 (39%)
 Frame = +2

Query: 152 SSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQP 331
           SS  + L +P   Q       GE S G               P  +++   +   +PD  
Sbjct: 70  SSTGNALSNPSLDQATTDKSAGEKSVG-----------PIKPPPISIKTTTITDFQPDV- 117

Query: 332 ECIYYIKTGDCKFGAVCKFHHPR 400
            C  +++TG C +G  CKF H R
Sbjct: 118 -CKDFLQTGYCGYGDTCKFLHIR 139



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 410 QPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDH 532
           +PPP  I +      +P  ++CK + + G C +G  CKF H
Sbjct: 99  KPPPISIKTTTITDFQP--DVCKDFLQTGYCGYGDTCKFLH 137
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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/65 (24%), Positives = 24/65 (36%)
 Frame = +2

Query: 344 YIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCK 523
           + + G C  G  C F H     +P                  +CK++ + G CKFG  C 
Sbjct: 49  FFRNGTCTAGENCPFSHSLETERP------------------ICKYFLK-GNCKFGPKCA 89

Query: 524 FDHPM 538
             H +
Sbjct: 90  LSHAL 94
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>ADAM9_MOUSE (Q61072) ADAM 9 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 9)
           (Metalloprotease/disintegrin/cysteine-rich protein 9)
           (Myeloma cell metalloproteinase) (Meltrin gamma)
          Length = 845

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 251 PYRSSSFPVPQYALQRENVFPERPDQPE 334
           P   + FPVP YA ++   FP RP  P+
Sbjct: 793 PGHGNRFPVPTYAAKQPAQFPSRPPPPQ 820
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>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor|
          Length = 838

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
 Frame = +2

Query: 5   QWQVGLIQXGSFIPSPRWQSPSNYTPMIVPQGL-VQVPSWNSYPGQMVPVSSPESRLQS- 178
           Q Q G     S  P+   Q         V QG   Q P     PGQ  P   P S LQS 
Sbjct: 376 QGQPGYYPTSSQQPTQSQQPGQGQQGQQVGQGQQAQQPGQGQQPGQGQPGYYPTSPLQSG 435

Query: 179 PGAQQYYGTSRQ--GEGSAGNQGMQS 250
            G   YY TS Q  G+G    Q  QS
Sbjct: 436 QGQPGYYLTSPQQSGQGQQPGQLQQS 461
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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +2

Query: 365  KFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP 460
            K G V   HHPR    PPP  +  P   P RP
Sbjct: 2519 KAGGVSGTHHPRPGHDPPPTPLPDPRPSPPRP 2550
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>CTH1_YEAST (P47976) Zinc finger protein CTH1|
          Length = 325

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 425 CILSPMGLPLRPGE-----ELCKFYSRYGICKFGVNCKFDH 532
           C  +P+ LP    +     ELC+ ++  G CK+G  C+F H
Sbjct: 189 CRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAH 229
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>CWC2_LEPMC (Q6T412) Pre-mRNA-splicing factor CWC2|
          Length = 421

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 458 PGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVY 559
           PG   C F++R GIC  GV+C++ H +     ++
Sbjct: 127 PGSYFCLFFAR-GICPKGVDCEYLHRLPTVTDIF 159
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>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 26/80 (32%), Positives = 29/80 (36%)
 Frame = +2

Query: 92  PQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSF 271
           PQG  Q P     P    P   P+ R   PG  Q  G   QG    G QG   P      
Sbjct: 118 PQGGPQGPPQPGNPQGPPPQGGPQQRPPQPGKPQ--GPPPQG----GPQGPPQPGNPQG- 170

Query: 272 PVPQYALQRENVFPERPDQP 331
           P PQ   Q+    P +P  P
Sbjct: 171 PPPQGGHQQRPPQPRKPQDP 190
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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
 Frame = +2

Query: 92   PQGLVQVPSWNSY---PGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRS 262
            PQ   Q P +      PGQ  P + P+    +PG     G +  G       G     R 
Sbjct: 1577 PQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQNRM 1636

Query: 263  SSFPVPQYALQRENVFPERPDQ 328
               P  Q   Q++   P+ P Q
Sbjct: 1637 PGMPAQQQQSQQQGGVPQPPPQ 1658
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>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)|
          Length = 572

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 23/86 (26%), Positives = 38/86 (44%)
 Frame = +2

Query: 32  GSFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSR 211
           G   P P W+SPS+  P+  PQ  V  P+ +     + P   P+ ++      Q +  S+
Sbjct: 192 GGTAPLPPWKSPSSSQPL--PQ--VPAPAQSQTQFHVQPQPQPKPQV------QLHVQSQ 241

Query: 212 QGEGSAGNQGMQSPYRSSSFPVPQYA 289
               S  N   + P  SS  P P+++
Sbjct: 242 TQPVSLANTQPRGPPASSPAPAPKFS 267
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>GRHL3_HUMAN (Q8TE85) Grainyhead-like protein 3 homolog (Sister of mammalian|
           grainyhead) (Transcription factor CP2-like 4)
          Length = 626

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 302 NVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCI 430
           N   E+   PE   Y     CK G     H PR+   PPPDC+
Sbjct: 542 NAISEKYGFPEENIYKVYKKCKRGETSLLH-PRLSRHPPPDCL 583
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>SSXT_MOUSE (Q62280) SSXT protein (SYT protein) (Synovial sarcoma-associated|
           Ss18-alpha)
          Length = 418

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
 Frame = +2

Query: 44  PSPRWQSP----SNYTPMIVPQGLV-QVPSWNSYPGQ--MVPVSSPESR--LQSPGAQQY 196
           PS ++  P     +Y     P GL+ QV   +   GQ  M P   P+     Q  G + Y
Sbjct: 211 PSQQYNMPPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDY 270

Query: 197 YGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPE----RPDQPECIYYIKTGDC 364
           YG      G    +GM   Y         Y  Q+ + +PE    RP +    +Y + G+ 
Sbjct: 271 YGDQYSHGGQGPPEGMNQQYYPDGH--NDYGYQQPS-YPEQGYDRPYEDSSQHYYEGGNS 327

Query: 365 KFG 373
           ++G
Sbjct: 328 QYG 330
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>SECB_PELUB (Q4FNS8) Protein-export protein secB|
          Length = 140

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 293 AVHTEVQEMNWICRVIAFPDFLHCLHLVEKFHSIVELLETVVDSQEMKQV 144
           AV   + E+N I R    P+ L   H    + SIV++ E V D +EM+++
Sbjct: 45  AVKNGIIEVNTILRFSDQPEILKKAHFEITYTSIVKVDEKVSDKKEMEKI 94
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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 326 QPECIYYIKTGDCKFGAVCKFHH 394
           + +C  ++KTG+C +G  C+F H
Sbjct: 39  ETQCRNWLKTGNCLYGNTCRFVH 61
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>TSNA1_HUMAN (Q96NA8) t-SNARE domain-containing protein 1|
          Length = 513

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +2

Query: 119 WNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQR 298
           W  Y  +  P  SPES+LQ+P         + GEG  G  G           VP+   + 
Sbjct: 35  WTEYGIRHFPCPSPESKLQNP------CVGKDGEGDLGPAGTPI--------VPRARKRG 80

Query: 299 ENVFPERPDQPE 334
             V PE    PE
Sbjct: 81  PGVAPEGSRMPE 92
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>ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing protein 8 (Fetal|
           liver zinc finger protein 1)
          Length = 305

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
 Frame = +2

Query: 314 ERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRP-------GEEL 472
           ER  +  C Y+++   C  G  CKF H     +    C     G   +         E  
Sbjct: 204 ERKGKQVCKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSEYP 262

Query: 473 CKFYSRYGICKFGVNCKFDH-PMAA 544
           CKFY     C  G +C F H P+ A
Sbjct: 263 CKFYHTGTKCYQGDHCNFSHAPLTA 287
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>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 238

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/106 (22%), Positives = 36/106 (33%)
 Frame = +2

Query: 17  GLIQXGSFIPSPRWQSPSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQY 196
           G+ Q G +  +P+  +P+       PQ           P    P   P+S    P AQQ 
Sbjct: 126 GMPQNGGYQSAPQQAAPAQNQYAPAPQAA---------PAYQAPAPQPQSGYNQPPAQQS 176

Query: 197 YGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQPE 334
           YG   Q +     Q    P +    P P     +    P +   P+
Sbjct: 177 YG---QQQAQPHVQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQ 219
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>MINK1_MOUSE (Q9JM52) Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated|
           protein kinase kinase kinase kinase 6) (MAPK/ERK kinase
           kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6)
           (Misshapen/NIK-related kinase) (GCK family kinase MiNK)
          Length = 1308

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = +2

Query: 50  PRWQSPSNYTPMIVPQGLVQVPS-------WNSYPGQMVPVSSPESRLQSPG 184
           P W  P N  P  VPQ    + +         S P Q V  S+P+ R   PG
Sbjct: 658 PSWVRPDNEAPPKVPQRTSSIATALNTSGAGGSRPAQAVRASNPDLRRSDPG 709


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,857,623
Number of Sequences: 219361
Number of extensions: 2211859
Number of successful extensions: 7118
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 6477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6988
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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