ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
4gb|AY594285.1| Oryza sativa (japonica cultivar group) LRR-like p... 72 2e-09
5dbj|AK063611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
6gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
7gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9ref|NM_188784.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
10gb|AC133896.7| Mus musculus chromosome 5, clone RP24-529E15, com... 42 1.8
11gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 42 1.8
12gb|AC161813.2| Mus musculus chromosome 5, clone RP23-264M9, comp... 42 1.8
13dbj|AK031827.1| Mus musculus adult male medulla oblongata cDNA, ... 42 1.8
14dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15gb|AC007022.2|AC007022 Homo sapiens PAC clone RP1-29I24 from X, ... 42 1.8
16gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.9
17gb|DQ214259.1| Taeniopygia guttata clone 0058P0007D01 mitochondr... 40 6.9
18ref|NM_022920.1| Rattus norvegicus glutamate receptor, metabotro... 40 6.9
19gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete... 40 6.9
20gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, comple... 40 6.9
21gb|AC146086.2| Pan troglodytes BAC clone RP43-15D2 from 7, compl... 40 6.9
22dbj|D13963.1|RATMGLUR6 Rattus norvegicus mRNA for metabotropic g... 40 6.9
23gb|AC016584.5| Homo sapiens chromosome 19 clone CTD-2596O15, com... 40 6.9
24gb|S64572.1| nonfibrillar collagen [Strongylocentrotus purpuratu... 40 6.9
25ref|NM_214466.1| Strongylocentrotus purpuratus 3 alpha procollag... 40 6.9
26dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.9
27emb|AL358274.3|CNS05TDX Human chromosome 14 DNA sequence BAC C-2... 40 6.9
28gb|L02917.1|SUSCOLP Strongylocentrotus purpuratus 3 alpha procol... 40 6.9 
>dbj|AK067202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D17, full
            insert sequence
          Length = 2800

 Score =  244 bits (123), Expect = 2e-61
 Identities = 355/431 (82%), Gaps = 1/431 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   gctctgcgatgggcatcaaccaaccttacc-ggaggggtgatcaactcgtgcttatccat 68
            ||||||||||||||||||||||| |||||| |||| |||||||| || || |||||||||
Sbjct: 2045 gctctgcgatgggcatcaaccaatcttaccaggagcggtgatcagcttgtacttatccat 2104

                                                                        
Query: 69   gtcaacaactcctaccagaatgagcaaggagcgatgcatctctgggaacagagtggttca 128
            ||||| |  ||||| || ||||||||||| ||  | || || ||||||||||||||||||
Sbjct: 2105 gtcaatagttcctatcataatgagcaaggtgcagttcaactgtgggaacagagtggttca 2164

                                                                        
Query: 129  ccgctcatccctctggtagagttctcggacccccatgtcaccaagaagtacggcctgtca 188
            |||||||||||||||| ||||||||| || ||||||||| ||||||  || |   |||||
Sbjct: 2165 ccgctcatccctctggcagagttctcagatccccatgtcgccaagacatatgctgtgtca 2224

                                                                        
Query: 189  ccggacaaggagacgctggagatcctggcccaagtggcgcatcagagcggggttgaggtc 248
            || |||||||| || || || ||||||   ||| || || ||||||| |||||||| |||
Sbjct: 2225 cccgacaaggaaacactagaaatcctgaatcaaatgtcgaatcagagaggggttgaagtc 2284

                                                                        
Query: 249  tttgtgaagatattctatggcgacccgatcaagaagctgtgcgaggcagttgacctggtt 308
             |||  |||||| |||| || |||||    ||||||||||  || |||||||||||||||
Sbjct: 2285 cttgcaaagatactctacggtgaccctgcaaagaagctgtatgaagcagttgacctggtt 2344

                                                                        
Query: 309  cctctcggctgcctggtcatcggaagcagaggtctgagcacgctcaagagggctctgatg 368
            || |||  |||| ||||  | |||| |||||| || ||||| ||||||||||||||||||
Sbjct: 2345 cccctcaactgcttggtggttggaaacagagggctaagcacactcaagagggctctgatg 2404

                                                                        
Query: 369  gggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacggtcgtgaaggag 428
            || ||||| ||| ||||| | |||||  ||||| ||||||| || |||||||| ||||||
Sbjct: 2405 ggaagcgtcagctcctacatcgtgaataacgcgacctgcccagttacggtcgtcaaggag 2464

                       
Query: 429  aacatgtagct 439
            ||||| |||||
Sbjct: 2465 aacatatagct 2475
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 104/121 (85%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                           
Query: 10      gctctgcgatgggcatcaaccaaccttacc-ggaggggtgatcaactcgtgcttatccat 68
               ||||||||||||||||||||||| |||||| |||| |||||||| || || |||||||||
Sbjct: 3648328 gctctgcgatgggcatcaaccaatcttaccaggagcggtgatcagcttgtacttatccat 3648387

                                                                           
Query: 69      gtcaacaactcctaccagaatgagcaaggagcgatgcatctctgggaacagagtggttca 128
               ||||| |  ||||| || ||||||||||| ||  | || || ||||||||||||||||||
Sbjct: 3648388 gtcaatagttcctatcataatgagcaaggtgcagttcaactgtgggaacagagtggttca 3648447

                
Query: 129     c 129
               |
Sbjct: 3648448 c 3648448



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                           
Query: 357     agggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacg 416
               |||||||||||||| ||||| ||| ||||| | |||||  ||||| ||||||| || |||
Sbjct: 3649282 agggctctgatgggaagcgtcagctcctacatcgtgaataacgcgacctgcccagttacg 3649341

                                      
Query: 417     gtcgtgaaggagaacatgtagct 439
               ||||| ||||||||||| |||||
Sbjct: 3649342 gtcgtcaaggagaacatatagct 3649364



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 125     ttcaccgctcatccctctggtagagttctcggacccccatgtcaccaaga 174
               |||| ||||||||||||||| ||||||||| || ||||||||| ||||||
Sbjct: 3648614 ttcagcgctcatccctctggcagagttctcagatccccatgtcgccaaga 3648663



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                           
Query: 279     aagaagctgtgcgaggcagttgacctggttcctctcggctgcctggtcatcggaagcaga 338
               ||||||||||  || ||||||||||||||||| |||  |||| ||||  | |||| ||||
Sbjct: 3648880 aagaagctgtatgaagcagttgacctggttcccctcaactgcttggtggttggaaacaga 3648939

                                    
Query: 339     ggtctgagcacgctcaagagg 359
               || || ||||| |||||||||
Sbjct: 3648940 gggctaagcacactcaagagg 3648960



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 189     ccggacaaggagacgctggag 209
               |||||||||||||||||||||
Sbjct: 8159505 ccggacaaggagacgctggag 8159525
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 104/121 (85%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 10    gctctgcgatgggcatcaaccaaccttacc-ggaggggtgatcaactcgtgcttatccat 68
             ||||||||||||||||||||||| |||||| |||| |||||||| || || |||||||||
Sbjct: 56808 gctctgcgatgggcatcaaccaatcttaccaggagcggtgatcagcttgtacttatccat 56867

                                                                         
Query: 69    gtcaacaactcctaccagaatgagcaaggagcgatgcatctctgggaacagagtggttca 128
             ||||| |  ||||| || ||||||||||| ||  | || || ||||||||||||||||||
Sbjct: 56868 gtcaatagttcctatcataatgagcaaggtgcagttcaactgtgggaacagagtggttca 56927

              
Query: 129   c 129
             |
Sbjct: 56928 c 56928



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                         
Query: 357   agggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacg 416
             |||||||||||||| ||||| ||| ||||| | |||||  ||||| ||||||| || |||
Sbjct: 57762 agggctctgatgggaagcgtcagctcctacatcgtgaataacgcgacctgcccagttacg 57821

                                    
Query: 417   gtcgtgaaggagaacatgtagct 439
             ||||| ||||||||||| |||||
Sbjct: 57822 gtcgtcaaggagaacatatagct 57844



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 125   ttcaccgctcatccctctggtagagttctcggacccccatgtcaccaaga 174
             |||| ||||||||||||||| ||||||||| || ||||||||| ||||||
Sbjct: 57094 ttcagcgctcatccctctggcagagttctcagatccccatgtcgccaaga 57143



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                         
Query: 279   aagaagctgtgcgaggcagttgacctggttcctctcggctgcctggtcatcggaagcaga 338
             ||||||||||  || ||||||||||||||||| |||  |||| ||||  | |||| ||||
Sbjct: 57360 aagaagctgtatgaagcagttgacctggttcccctcaactgcttggtggttggaaacaga 57419

                                  
Query: 339   ggtctgagcacgctcaagagg 359
             || || ||||| |||||||||
Sbjct: 57420 gggctaagcacactcaagagg 57440
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>gb|AY594285.1| Oryza sativa (japonica cultivar group) LRR-like protein mRNA,
           complete cds
          Length = 666

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 352 tcaagagggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccgg 411
           ||||||||| ||||||||||||||||||||| ||||| |  ||||||||  ||||||| |
Sbjct: 395 tcaagagggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccg 454

                               
Query: 412 tcacggtcgtgaaggagaac 431
           |||| ||||| | |||||||
Sbjct: 455 tcaccgtcgtcagggagaac 474
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>dbj|AK063611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D04, full
           insert sequence
          Length = 773

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 352 tcaagagggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccgg 411
           ||||||||| ||||||||||||||||||||| ||||| |  ||||||||  ||||||| |
Sbjct: 521 tcaagagggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccg 580

                               
Query: 412 tcacggtcgtgaaggagaac 431
           |||| ||||| | |||||||
Sbjct: 581 tcaccgtcgtcagggagaac 600
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                         
Query: 357   agggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacg 416
             |||| ||||||||||||||||||||| ||||| |  ||||||||  ||||||| ||||| 
Sbjct: 34868 agggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccgtcacc 34927

                            
Query: 417   gtcgtgaaggagaac 431
             ||||| | |||||||
Sbjct: 34928 gtcgtcagggagaac 34942
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>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
              complete sequence
          Length = 136713

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                          
Query: 357    agggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacg 416
              |||| ||||||||||||||||||||| ||||| |  ||||||||  ||||||| ||||| 
Sbjct: 123083 agggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccgtcacc 123142

                             
Query: 417    gtcgtgaaggagaac 431
              ||||| | |||||||
Sbjct: 123143 gtcgtcagggagaac 123157
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                           
Query: 357     agggctctgatggggagcgtgagcacctacgttgtgaaccacgcggcctgcccggtcacg 416
               |||| ||||||||||||||||||||| ||||| |  ||||||||  ||||||| ||||| 
Sbjct: 4148389 agggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccgtcacc 4148448

                              
Query: 417     gtcgtgaaggagaac 431
               ||||| | |||||||
Sbjct: 4148449 gtcgtcagggagaac 4148463
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>ref|NM_188784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 723

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 ccggacaaggagacgctggag 209
           |||||||||||||||||||||
Sbjct: 379 ccggacaaggagacgctggag 399
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>gb|AC133896.7| Mus musculus chromosome 5, clone RP24-529E15, complete sequence
          Length = 187415

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     tgggcatcaaccaaccttacc 39
              |||||||||||||||||||||
Sbjct: 120024 tgggcatcaaccaaccttacc 120004
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    ccggacaaggagacgctggag 209
              |||||||||||||||||||||
Sbjct: 123626 ccggacaaggagacgctggag 123646
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>gb|AC161813.2| Mus musculus chromosome 5, clone RP23-264M9, complete sequence
          Length = 154852

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     tgggcatcaaccaaccttacc 39
              |||||||||||||||||||||
Sbjct: 135249 tgggcatcaaccaaccttacc 135269
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>dbj|AK031827.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330410G14
            product:unclassifiable, full insert sequence
          Length = 3277

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   tgggcatcaaccaaccttacc 39
            |||||||||||||||||||||
Sbjct: 1152 tgggcatcaaccaaccttacc 1132
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C11
          Length = 139399

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   ccggacaaggagacgctggag 209
             |||||||||||||||||||||
Sbjct: 77223 ccggacaaggagacgctggag 77243
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>gb|AC007022.2|AC007022 Homo sapiens PAC clone RP1-29I24 from X, complete sequence
          Length = 72541

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   gtgaaggagaacatgtagctg 440
             |||||||||||||||||||||
Sbjct: 49530 gtgaaggagaacatgtagctg 49510
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    ggacaaggagacgctggaga 210
              ||||||||||||||||||||
Sbjct: 368222 ggacaaggagacgctggaga 368241
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>gb|DQ214259.1| Taeniopygia guttata clone 0058P0007D01 mitochondrial ribosomal
           protein L12 variant 4-like mRNA, complete sequence
          Length = 777

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 caaggagacgctggagatcc 213
           ||||||||||||||||||||
Sbjct: 274 caaggagacgctggagatcc 293
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>ref|NM_022920.1| Rattus norvegicus glutamate receptor, metabotropic 6 (Grm6), mRNA
          Length = 4418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 232 agagcggggttgaggtctttgtgaagat 259
           ||||||||||||||| ||||||| ||||
Sbjct: 826 agagcggggttgaggcctttgtgcagat 853
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>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence
          Length = 154344

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   atacatacaagaagataata 484
             ||||||||||||||||||||
Sbjct: 43189 atacatacaagaagataata 43170
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>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence
          Length = 220068

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   atgtatgatgatacatacaa 474
             ||||||||||||||||||||
Sbjct: 67980 atgtatgatgatacatacaa 67961
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>gb|AC146086.2| Pan troglodytes BAC clone RP43-15D2 from 7, complete sequence
          Length = 135353

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    atacatacaagaagataata 484
              ||||||||||||||||||||
Sbjct: 106799 atacatacaagaagataata 106780
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>dbj|D13963.1|RATMGLUR6 Rattus norvegicus mRNA for metabotropic glutamate receptor subtype,
           complete cds
          Length = 4418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 232 agagcggggttgaggtctttgtgaagat 259
           ||||||||||||||| ||||||| ||||
Sbjct: 826 agagcggggttgaggcctttgtgcagat 853
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>gb|AC016584.5| Homo sapiens chromosome 19 clone CTD-2596O15, complete sequence
          Length = 132457

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   tgatacatacaagaagataa 482
             ||||||||||||||||||||
Sbjct: 36875 tgatacatacaagaagataa 36856
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>gb|S64572.1| nonfibrillar collagen [Strongylocentrotus purpuratus=sea urchin, mRNA
            Partial, 2721 nt]
          Length = 2721

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 195  aaggagacgctggagatcctggcc 218
            |||||||| |||||||||||||||
Sbjct: 1904 aaggagactctggagatcctggcc 1927
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>ref|NM_214466.1| Strongylocentrotus purpuratus 3 alpha procollagen (COLP3alpha), mRNA
          Length = 6006

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 195  aaggagacgctggagatcctggcc 218
            |||||||| |||||||||||||||
Sbjct: 4544 aaggagactctggagatcctggcc 4567
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 25      tcaaccaaccttaccggaggggtg 48
               ||||||||||||||||||| ||||
Sbjct: 4710063 tcaaccaaccttaccggagtggtg 4710040
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>emb|AL358274.3|CNS05TDX Human chromosome 14 DNA sequence BAC C-2350E12 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145532

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    gaaggagaacatgtagctgcagct 445
              |||| |||||||||||||||||||
Sbjct: 113535 gaagcagaacatgtagctgcagct 113512
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>gb|L02917.1|SUSCOLP Strongylocentrotus purpuratus 3 alpha procollagen (COLP3alpha) mRNA,
            complete cds
          Length = 6006

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 195  aaggagacgctggagatcctggcc 218
            |||||||| |||||||||||||||
Sbjct: 4544 aaggagactctggagatcctggcc 4567


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,299,546
Number of Sequences: 3902068
Number of extensions: 3299546
Number of successful extensions: 59716
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59589
Number of HSP's gapped (non-prelim): 123
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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