ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4j16 |
|---|---|
| Clone Library Name | barley_pub |
>THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor| Length = 287 Score = 290 bits (741), Expect = 3e-78 Identities = 148/182 (81%), Positives = 159/182 (87%), Gaps = 1/182 (0%) Frame = +2 Query: 29 MAAISSLPFAALRRAADWRPSTATAAVSV-SGGVMLNXXXXXXXXXXXXCVITAGDIPPT 205 MAAISSLPFAALRRAAD RPSTA AA +G V+L+ CV TAGD+PPT Sbjct: 1 MAAISSLPFAALRRAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPT 60 Query: 206 VADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEG 385 VA+TKMNFLKSYKRPI SIYSTVLQELLVQQHLMRYK+TYQYD VFALGFVTVYDQLMEG Sbjct: 61 VAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEG 120 Query: 386 YPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKD 565 YPSNEDRDAIFK+Y+TALNEDPEQYRADAQ+MEEWARSQNGN LVEFSS+DGEIE+ILKD Sbjct: 121 YPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKD 180 Query: 566 IS 571 IS Sbjct: 181 IS 182
>THF1_SOLTU (Q7XAB8) Protein THYLAKOID FORMATION1, chloroplast precursor| Length = 293 Score = 214 bits (545), Expect = 1e-55 Identities = 109/191 (57%), Positives = 143/191 (74%), Gaps = 10/191 (5%) Frame = +2 Query: 29 MAAISSLPFAALRRAADWRPSTATAAVSVS----------GGVMLNXXXXXXXXXXXXCV 178 MAA++S+ F+A+ ++A+ R S+ +++ S+ V + Sbjct: 1 MAAVTSVSFSAITQSAE-RKSSVSSSRSIDTFRFRSNFSFDSVNVRSSNSTSRFVVHCTS 59 Query: 179 ITAGDIPPTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFV 358 +A D+P TVADTK+ FL +YKRPIP++Y+TVLQEL+VQQHL RYK +YQYDPVFALGFV Sbjct: 60 SSAADLP-TVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFV 118 Query: 359 TVYDQLMEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRD 538 TVYDQLMEGYPS EDR+AIFK+Y+ AL EDPEQYRADAQ++EEWAR+QN N LV+FSS++ Sbjct: 119 TVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKE 178 Query: 539 GEIESILKDIS 571 GEIE+I KDI+ Sbjct: 179 GEIENIFKDIA 189
>THF1_ARATH (Q9SKT0) Protein THYLAKOID FORMATION1, chloroplast precursor| Length = 300 Score = 211 bits (538), Expect = 9e-55 Identities = 112/186 (60%), Positives = 138/186 (74%), Gaps = 7/186 (3%) Frame = +2 Query: 35 AISSLPFAALRRA------ADWRPSTATAAVSVS-GGVMLNXXXXXXXXXXXXCVITAGD 193 AISSL F AL ++ A RP + + + LN +TA D Sbjct: 5 AISSLSFPALGQSDKISNFASSRPLASAIRICTKFSRLSLNSRSTSKSLIHCMSNVTA-D 63 Query: 194 IPPTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQ 373 +PP V++TK FLK+YKRPIPSIY+TVLQEL+VQQHLMRYK TY+YDPVFALGFVTVYDQ Sbjct: 64 VPP-VSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQ 122 Query: 374 LMEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIES 553 LMEGYPS++DRDAIFK+Y+ ALNEDP+QYR DAQ+MEEWARSQ LV+FSS++G+IE+ Sbjct: 123 LMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEA 182 Query: 554 ILKDIS 571 +LKDI+ Sbjct: 183 VLKDIA 188
>THF1_ANASP (Q8YZ41) Protein thf1| Length = 233 Score = 99.0 bits (245), Expect = 9e-21 Identities = 45/116 (38%), Positives = 76/116 (65%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 TV+DTK F + RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +D+ ME Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFME 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIE 550 GY D+++IF + A+ ++P++YR DA+R++ A+S N LV + S+ ++ Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQ 121
>THF1_ANAVT (Q3M4B2) Protein thf1| Length = 233 Score = 97.4 bits (241), Expect = 2e-20 Identities = 44/116 (37%), Positives = 76/116 (65%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 TV+DTK F + RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +D+ M+ Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQ 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIE 550 GY D+++IF + A+ ++P++YR DA+R++ A+S N LV + S+ ++ Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQ 121
>THF1_SYNEL (Q8DJT8) Protein thf1| Length = 222 Score = 93.6 bits (231), Expect = 4e-19 Identities = 47/112 (41%), Positives = 67/112 (59%) Frame = +2 Query: 197 PPTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQL 376 P TV+DTK F ++ RPI SIY ++ELLV+ HL+R ++Y P+FALG VT +DQ Sbjct: 4 PRTVSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQF 63 Query: 377 MEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSS 532 MEGY DRD IF + A +P+Q + DA +++ +L E +S Sbjct: 64 MEGYQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQGRPLSQILDELNS 115
>THF1_SYNJB (P0C1D1) Protein thf1| Length = 239 Score = 88.2 bits (217), Expect = 2e-17 Identities = 45/95 (47%), Positives = 61/95 (64%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T++ TK F +Y RPI ++Y V++ELLV+ HL ST+ YDP FALG VT+YD LME Sbjct: 6 TLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGLME 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEE 487 Y E R+AIF + AL+ PE R +A+ + E Sbjct: 66 AYHPPEQREAIFNALCKALHLKPEVLRKNARDLLE 100
>THF1_SYNJA (Q2JSQ3) Protein thf1| Length = 239 Score = 88.2 bits (217), Expect = 2e-17 Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 4/109 (3%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T++ TK F +Y RPI + Y V++ELLV+ HL S + YDP FALG VT+YD LME Sbjct: 6 TLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSLME 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARS----QNGNLL 517 Y E R+AIF + AL+ PE R +A+ + E RS Q NLL Sbjct: 66 AYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRSGDPVQRYNLL 114
>THF1_SYNP7 (Q31MY4) Protein thf1| Length = 254 Score = 87.4 bits (215), Expect = 3e-17 Identities = 42/99 (42%), Positives = 61/99 (61%) Frame = +2 Query: 200 PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 379 PTV+D+K F +Y RPI +Y V++ELLV+ HL+ +++ YDP+FALG VT +D M Sbjct: 5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFM 64 Query: 380 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWAR 496 Y E +F + A+ ++PEQYR DA + E R Sbjct: 65 SSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVR 103
>THF1_SYNP6 (Q5N664) Protein thf1| Length = 254 Score = 87.4 bits (215), Expect = 3e-17 Identities = 42/99 (42%), Positives = 61/99 (61%) Frame = +2 Query: 200 PTVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLM 379 PTV+D+K F +Y RPI +Y V++ELLV+ HL+ +++ YDP+FALG VT +D M Sbjct: 5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFM 64 Query: 380 EGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWAR 496 Y E +F + A+ ++PEQYR DA + E R Sbjct: 65 SSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVR 103
>THF1_SYNY3 (P73956) Protein thf1| Length = 240 Score = 84.7 bits (208), Expect = 2e-16 Identities = 39/93 (41%), Positives = 57/93 (61%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 TV+D K F Y RPI SIY ++ELLV+ HL+ + YDP+FALG VT ++ M+ Sbjct: 6 TVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQ 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRM 481 GY E AIF + ++++P+Q R DA+ + Sbjct: 66 GYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNV 98
>THF1_GLOVI (Q7NKS7) Protein thf1| Length = 228 Score = 84.7 bits (208), Expect = 2e-16 Identities = 42/90 (46%), Positives = 56/90 (62%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 TV+D+K F +Y RP+ SIY V+ ELLV+ HL+ +++DP+FA G +T Y LME Sbjct: 6 TVSDSKRAFFAAYPRPVNSIYRRVIDELLVEVHLLITNQDFRHDPLFATGLLTAYQALME 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADA 472 GY E RDAI ++ TAL EQ DA Sbjct: 66 GYTPVEQRDAILRALCTALELSYEQLHTDA 95
>THF1_SYNSC (Q3AJN7) Protein thf1| Length = 215 Score = 61.2 bits (147), Expect = 2e-09 Identities = 30/110 (27%), Positives = 62/110 (56%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T+AD+K F +++ I +Y + ELLV+ HL+ ++S ++ + +F++G TV+D ++ Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSRFEANELFSVGLCTVFDTFIK 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSS 532 GY DA+F++ ++ D + R + E A+ ++ L ++ S Sbjct: 66 GYRPEAQTDALFRALCSSNGFDAAKLRKTYASLVEQAKGKDPESLKDWLS 115
>THF1_SYNS9 (Q3AY05) Protein thf1| Length = 215 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/101 (27%), Positives = 58/101 (57%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T+AD+K F +++ I +Y + ELLV+ HL+ ++S+++ P+FA+G TV+D Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRLADELLVELHLLSHQSSFKTTPLFAVGLCTVFDTFSA 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQN 505 GY E + + ++ D +R +++R + A++++ Sbjct: 66 GYRPEEHITGLLDALCSSNGYDANTFRKESKRCIDAAKTES 106
>THF1_SYNPX (Q7U6N6) Protein thf1| Length = 212 Score = 60.5 bits (145), Expect = 3e-09 Identities = 29/91 (31%), Positives = 54/91 (59%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T+AD+K F +++ I +Y + ELLV+ HL+ +++T+Q + +FA+G TV+++ + Sbjct: 6 TIADSKRAFHQAFPHVIAPLYRRIADELLVELHLLSHQATFQANSLFAVGLKTVFERFTQ 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQ 475 GY E A+ + ++ D EQ + AQ Sbjct: 66 GYRPMEHPAALLSALCSSNGFDDEQLKQAAQ 96
>THF1_PROMM (Q7V7R3) Protein thf1| Length = 243 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/101 (30%), Positives = 48/101 (47%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T+AD+K F + IPS+Y ELLV+ HL+ ++ + D +FA+G V+D Sbjct: 6 TIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTS 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQN 505 GY +F + + DP R AQ+ E R + Sbjct: 66 GYRPEAHVKTLFDALCRSCGFDPNALRKQAQQTLESVRGHD 106
>THF1_PROMT (Q46L45) Protein thf1| Length = 199 Score = 57.8 bits (138), Expect = 2e-08 Identities = 29/111 (26%), Positives = 57/111 (51%) Frame = +2 Query: 203 TVADTKMNFLKSYKRPIPSIYSTVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLME 382 T++D+K +F K + IP+IY + ELLV+ HL+ ++ ++ D +F+ G V+ + Sbjct: 6 TISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFSKFTS 65 Query: 383 GYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEEWARSQNGNLLVEFSSR 535 GY +E +F + +P + ++++ A+S L F S+ Sbjct: 66 GYKPSEHATKLFDAICNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSK 116
>BIMA_EMENI (P17885) Protein bimA| Length = 806 Score = 32.3 bits (72), Expect = 0.98 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +2 Query: 296 QHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALNEDPEQYRA 466 Q L +K Q DP FA GF + Y +NE+ D +Y + +N D Y A Sbjct: 599 QALKCFKRATQLDPHFAYGFTLQGHE----YVANEEYDKALDAYRSGINADSRHYNA 651
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Frame = +2 Query: 356 VTVYDQLMEGYPSNEDRDAIFKSYVTALN---EDPEQYRADAQRMEEWARSQNGNLLVEF 526 VT+ D++ + +D +I K +V +L +D E Y ++ Q +E+W +G L+ Sbjct: 3890 VTLKDKIDQLQSDYQDLCSIGKEHVFSLEAKVKDHEDYNSELQEVEKWLLQMSGRLVAPD 3949 Query: 527 SSRDGEIESILKDIS 571 +E+I + ++ Sbjct: 3950 LLETSSLETITQQLA 3964
>SEC17_SCHPO (Q9P4X4) Probable vesicular-fusion protein sec17 homolog| Length = 289 Score = 30.8 bits (68), Expect = 2.9 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 16/126 (12%) Frame = +2 Query: 209 ADTKMNFLKSYKRPIPSIYSTVLQ---ELLVQQHLMRYKSTYQYD--PVF---------A 346 A T + KSY+R PS + VLQ EL ++ R + Y+ D +F A Sbjct: 75 ASTYVEAFKSYRREKPSEAARVLQIAIELFTRRGNFRRAANYKMDLGDIFEQELQDTKAA 134 Query: 347 LGFVTVYDQLMEGYPSNEDRDAIFKSYVTA--LNEDPEQYRADAQRMEEWARSQNGNLLV 520 LG Y+ E Y S++ K+Y+ A L +Y ++ E+ AR+ N L+ Sbjct: 135 LG---AYEDAGEWYSSDQADALANKAYLKAADLAGLCGEYSLAIRKFEQVARASVQNNLL 191 Query: 521 EFSSRD 538 ++S +D Sbjct: 192 KWSVKD 197
>PFTB_CAEEL (P41992) Probable protein farnesyltransferase beta subunit (EC| 2.5.1.58) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta) Length = 335 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +1 Query: 10 QPEXLSHGGHIVASVRCTAPSGRLEAVDGDCRGERLRWRHAQREGSAG 153 +P SH G I V A +GRL+ +D D E L +R G G Sbjct: 190 RPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNG 237
>AKAP2_HUMAN (Q9Y2D5) A-kinase anchor protein 2 (Protein kinase A-anchoring| protein 2) (PRKA2) (AKAP-2) Length = 1103 Score = 30.4 bits (67), Expect = 3.7 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = -3 Query: 204 VGGISPAVMTQRTTEREPRRALALSMTPPETLTAAVAVDGLQSAARRSAANGSDDMAAMG 25 VGG+SP V T+ EP A PP + + D + A R + + S A+G Sbjct: 318 VGGLSPPV--HEATQPEPTERTASRQAPPHIELSNSSPDPMAEAERTNGHSPSQPRDALG 375 Query: 24 EXL 16 + L Sbjct: 376 DSL 378
>SAMN1_HUMAN (Q9NSI8) SAM domain-containing protein SAMSN-1 (SAM domain, SH3| domain and nuclear localisation signals protein 1) (SH3-SAM adaptor protein) (Hematopoietic adaptor containing SH3 and SAM domains 1) Length = 373 Score = 30.0 bits (66), Expect = 4.9 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Frame = +2 Query: 266 STVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALN- 442 S LQE L + HL Y ST L+ GY + ED I +S++ LN Sbjct: 243 SKTLQEFLERIHLQEYTSTL----------------LLNGYETLEDLKDIKESHLIELNI 286 Query: 443 EDPEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDIS 571 E+P+ R E + + +++ + E S+ DIS Sbjct: 287 ENPDDRRRLLSAAENFLEEE----IIQEQENEPEPLSLSSDIS 325
>YJ9G_YEAST (P47170) Hypothetical 182.0 kDa protein in NMD5-HOM6 intergenic| region Length = 1584 Score = 26.9 bits (58), Expect(2) = 5.7 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 13/71 (18%) Frame = +2 Query: 386 YPSNED--RDAIFKSYVTALNEDPEQYR---ADAQRMEEWARSQNGNLL--------VEF 526 +PS +D R+ IF+++ LN D EQY D R + R G + +E Sbjct: 902 FPSKDDFDRNFIFRNHSVTLNTDQEQYNQTYKDLLRDMIYMRLLTGFQICVGRQVEKIEL 961 Query: 527 SSRDGEIESIL 559 S GE E+++ Sbjct: 962 SRESGESETVV 972 Score = 21.2 bits (43), Expect(2) = 5.7 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = +1 Query: 211 RYKDELPEVVQTSYSKHLQYSSTRTFGAATSD 306 R+KD P+ V YSK +++ SD Sbjct: 870 RWKDVWPKYVARKYSKWRSFTTPAELPITISD 901
>PNO_CRYPV (Q968X7) Pyruvate dehydrogenase [NADP+] (EC 1.2.1.51) (Pyruvate:NADP+| oxidoreductase) (CpPNO) Length = 1934 Score = 29.6 bits (65), Expect = 6.4 Identities = 22/85 (25%), Positives = 39/85 (45%) Frame = +2 Query: 308 RYKSTYQYDPVFALGFVTVYDQLMEGYPSNEDRDAIFKSYVTALNEDPEQYRADAQRMEE 487 RY S + YD FV D + G P+ + F+ + + E+ +A ++ Sbjct: 1593 RYSSLFGYDITVLQLFVECLD--LWGKPNRK----FFQEFYRYCSNPEEKIQA-----KK 1641 Query: 488 WARSQNGNLLVEFSSRDGEIESILK 562 WA+++ L+ EFSS+ G + K Sbjct: 1642 WAQNEGKKLIEEFSSKTGTYLDVFK 1666
>FUT6_ARATH (Q9XI80) Fucosyltransferase 6 (EC 2.4.1.-) (AtFUT6)| Length = 537 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 Query: 491 PTLPSFVHQPCIAQDLHLTPLHMT*RWHPCPRCWGT 384 PT P+ PCI Q + P H+T H C WGT Sbjct: 477 PTGPTAPDPPCI-QSTSMDPCHLTPPSHGCEPEWGT 511
>PSN_DROME (O02194) Presenilin homolog (EC 3.4.23.-) (dPS) (DmPS)| Length = 541 Score = 29.3 bits (64), Expect = 8.3 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +2 Query: 5 GSSPRXSPMAAISSLPFAALRRAADWRPSTATAAVSVSGGVMLN 136 GSS + P AAI ++P +R RPS T SGG N Sbjct: 46 GSSNQDQPDAAILAVPNVVMREPCGSRPSRLTGGGGGSGGPPTN 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,565,409 Number of Sequences: 219361 Number of extensions: 1753244 Number of successful extensions: 5363 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 5223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5362 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
