ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL44_ARATH (O23290) 60S ribosomal protein L44 162 9e-40
2RL44_GOSHI (Q96499) 60S ribosomal protein L44 157 2e-38
3RL44_CRYNE (Q9HF88) 60S ribosomal protein L44 (60S ribosomal pro... 134 2e-31
4RL44_PHARH (O59870) 60S ribosomal protein L44 (60S ribosomal pro... 133 4e-31
5RL44_COPCI (Q9UWE4) 60S ribosomal protein L44 (60S ribosomal pro... 131 1e-30
6RL44_PICJA (P52809) 60S ribosomal protein L44 (60S ribosomal pro... 129 9e-30
7RL44_SCHPO (Q9UTI8) 60S ribosomal protein L44 127 3e-29
8RL44_PICCI (Q9UVB8) 60S ribosomal protein L44 (60S ribosomal pro... 126 4e-29
9RL44P_CANMA (Q00477) 60S ribosomal protein L44 P (L41) (L41 P-type) 126 4e-29
10RL44_YEAST (P02405) 60S ribosomal protein L42 (L44) (YL27) (YP44... 125 1e-28
11RL44_PICGU (P31866) 60S ribosomal protein L44 (60S ribosomal pro... 124 2e-28
12RL44_KLUMA (P27076) 60S ribosomal protein L44 (60S ribosomal pro... 124 2e-28
13RL44_KLULA (P31027) 60S ribosomal protein L44 (60S ribosomal pro... 123 4e-28
14RL44_DEBOC (P31028) 60S ribosomal protein L44 (L41) 123 4e-28
15RL44Q_CANMA (P27074) 60S ribosomal protein L44 Q (L41) (L41 Q-type) 122 1e-27
16RL44_CANTR (P27075) 60S ribosomal protein L44 (60S ribosomal pro... 121 1e-27
17RL44_CAEEL (P48166) 60S ribosomal protein L44 (L41) 120 4e-27
18RL44_CHLRE (P49213) 60S ribosomal protein L44 (L41) 119 5e-27
19RL36A_RAT (P83883) 60S ribosomal protein L36a (60S ribosomal pro... 118 2e-26
20RL36A_PIG (P83884) 60S ribosomal protein L36a (60S ribosomal pro... 118 2e-26
21RL36A_MOUSE (P83882) 60S ribosomal protein L36a (60S ribosomal p... 118 2e-26
22RL36A_ICTPU (P61487) 60S ribosomal protein L36a 118 2e-26
23RL36A_HUMAN (P83881) 60S ribosomal protein L36a (60S ribosomal p... 118 2e-26
24RL36A_FUGRU (P61486) 60S ribosomal protein L36a (60S ribosomal p... 118 2e-26
25RL36A_BRARE (P61485) 60S ribosomal protein L36a 118 2e-26
26RL44_BRUMA (P90702) 60S ribosomal protein L44 117 3e-26
27RL36L_HUMAN (Q969Q0) 60S ribosomal protein L36a-like 117 3e-26
28RL36L_PONPY (Q5R9D2) 60S ribosomal protein L36a-like 115 1e-25
29RL44_AEDTR (Q9NB33) 60S ribosomal protein L44 113 5e-25
30RL44_PLAF7 (O97231) 60S ribosomal protein L44 108 2e-23
31RL44_TRYBB (P17843) 60S ribosomal protein L44 101 1e-21
32RL44_THEAC (Q9HIX1) 50S ribosomal protein L44E 49 1e-05
33RL44_PYRFU (Q8U475) 50S ribosomal protein L44E 42 0.001
34RL44_PYRAB (Q9UXZ2) 50S ribosomal protein L44E 41 0.002
35RL44_METJA (P54027) 50S ribosomal protein L44E 39 0.009
36RL44_PYRHO (O59603) 50S ribosomal protein L44E 39 0.015
37RL44_METTH (O27365) 50S ribosomal protein L44E 35 0.17
38RL44_AERPE (Q9YF00) 50S ribosomal protein L44E 35 0.22
39RL44_ARCFU (O28936) 50S ribosomal protein L44E 32 1.1
40ATG17_EMENI (Q5AZC0) Autophagy-related protein 17 30 5.5
41RNZ2_RAT (Q8CGS5) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.... 29 9.4
42UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Un... 29 9.4 
>RL44_ARATH (O23290) 60S ribosomal protein L44|
          Length = 104

 Score =  162 bits (409), Expect = 9e-40
 Identities = 77/104 (74%), Positives = 81/104 (77%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 372
                 IVL+LQCQSCKH+SQR IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  AKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 104
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>RL44_GOSHI (Q96499) 60S ribosomal protein L44|
          Length = 104

 Score =  157 bits (398), Expect = 2e-38
 Identities = 76/104 (73%), Positives = 78/104 (75%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 372
                 IVL+LQCQ CKH SQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 104
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>RL44_CRYNE (Q9HF88) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/103 (61%), Positives = 72/103 (69%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HT HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK   Q A+KRCKHFE+GGDKK +G ++
Sbjct: 61  AKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 103
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>RL44_PHARH (O59870) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  133 bits (335), Expect = 4e-31
 Identities = 62/103 (60%), Positives = 71/103 (68%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK+  Q  +KRCKHFE+GGDKK KG ++
Sbjct: 61  AKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 103
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>RL44_COPCI (Q9UWE4) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  131 bits (330), Expect = 1e-30
 Identities = 61/103 (59%), Positives = 72/103 (69%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK+  Q ++KRCKHFE+GG+KK KG +L
Sbjct: 61  AKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 103
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>RL44_PICJA (P52809) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  129 bits (323), Expect = 9e-30
 Identities = 63/103 (61%), Positives = 70/103 (67%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK  +Q A+KRCKHFE+GGDKK KG +L
Sbjct: 61  AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 103
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>RL44_SCHPO (Q9UTI8) 60S ribosomal protein L44|
          Length = 105

 Score =  127 bits (319), Expect = 3e-29
 Identities = 58/103 (56%), Positives = 72/103 (69%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HT+H+VTQYKKG DS  AQGKRRYDRKQSG+GGQTKPVFH  
Sbjct: 1   VNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C SCK+ +Q  +KRCKHFE+GG+KK KG ++
Sbjct: 61  AKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGAAI 103
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>RL44_PICCI (Q9UVB8) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  126 bits (317), Expect = 4e-29
 Identities = 61/103 (59%), Positives = 70/103 (67%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH  
Sbjct: 1   VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK  +Q ++KRCKHFE+GGD+K KG +L
Sbjct: 61  AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKGQAL 103
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>RL44P_CANMA (Q00477) 60S ribosomal protein L44 P (L41) (L41 P-type)|
          Length = 105

 Score =  126 bits (317), Expect = 4e-29
 Identities = 61/103 (59%), Positives = 70/103 (67%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              H+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH  
Sbjct: 1   VNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK  +Q A+KRCKHFE+GGDKK KG +L
Sbjct: 61  AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 103
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>RL44_YEAST (P02405) 60S ribosomal protein L42 (L44) (YL27) (YP44) (L41)|
           (Maintenance of killer protein 18)
          Length = 105

 Score =  125 bits (314), Expect = 1e-28
 Identities = 60/103 (58%), Positives = 69/103 (66%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH  
Sbjct: 1   VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C  CK  +Q  +KRCKHFE+GG+KK KG +L
Sbjct: 61  AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQAL 103
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>RL44_PICGU (P31866) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 102

 Score =  124 bits (312), Expect = 2e-28
 Identities = 60/100 (60%), Positives = 68/100 (68%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH  
Sbjct: 1   VNVPKTRRTYCKGKDCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKG 360
                 +VL+L+C  CK  +Q ++KRCKHFE+GGDKK KG
Sbjct: 61  AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKG 100
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>RL44_KLUMA (P27076) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  124 bits (311), Expect = 2e-28
 Identities = 59/103 (57%), Positives = 70/103 (67%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              H+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH  
Sbjct: 1   VNVPKTRKTYCKGKACRKHSQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C SCK  +Q A+KRCKHFE+GG+KK KG +L
Sbjct: 61  AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 103
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>RL44_KLULA (P31027) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  123 bits (309), Expect = 4e-28
 Identities = 59/103 (57%), Positives = 69/103 (66%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              H  HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH  
Sbjct: 1   VNVPKTRKTYCKGKECRKHAQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VL+L+C SCK  +Q A+KRCKHFE+GG+KK KG +L
Sbjct: 61  AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 103
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>RL44_DEBOC (P31028) 60S ribosomal protein L44 (L41)|
          Length = 105

 Score =  123 bits (309), Expect = 4e-28
 Identities = 60/103 (58%), Positives = 68/103 (66%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VNVP              HT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTK +FH  
Sbjct: 1   VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 +VLKL+C  CK  +Q ++KRCKHFE+GGDKK KG +L
Sbjct: 61  AKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 103
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>RL44Q_CANMA (P27074) 60S ribosomal protein L44 Q (L41) (L41 Q-type)|
          Length = 105

 Score =  122 bits (305), Expect = 1e-27
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH  
Sbjct: 1   VNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 IVLKL+C  CK   Q  +KRCKH E+GG+KK KG +L
Sbjct: 61  AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 103
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>RL44_CANTR (P27075) 60S ribosomal protein L44 (60S ribosomal protein L41)|
          Length = 105

 Score =  121 bits (304), Expect = 1e-27
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = +1

Query: 61  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXX 240
           VN+P              HT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH  
Sbjct: 1   VNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 60

Query: 241 XXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 369
                 IVLKL+C  CK   Q  +KRCKH E+GG+KK KG +L
Sbjct: 61  AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 103
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>RL44_CAEEL (P48166) 60S ribosomal protein L44 (L41)|
          Length = 104

 Score =  120 bits (300), Expect = 4e-27
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           HT HKVTQYKKGK+S  AQG+RRYDRKQSG+GGQTKP+F         IVL+++C  CKH
Sbjct: 18  HTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKH 77

Query: 295 YSQRAIKRCKHFEIGGDKKGKG 360
             Q  IKRCKHFE+GG KK +G
Sbjct: 78  KKQLPIKRCKHFELGGQKKSRG 99
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>RL44_CHLRE (P49213) 60S ribosomal protein L44 (L41)|
          Length = 98

 Score =  119 bits (299), Expect = 5e-27
 Identities = 55/79 (69%), Positives = 60/79 (75%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           H + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH        IVL++QCQ CK 
Sbjct: 17  HMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQ 76

Query: 295 YSQRAIKRCKHFEIGGDKK 351
              + +KRCKHFEIGGDKK
Sbjct: 77  TCMKGLKRCKHFEIGGDKK 95
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>RL36A_RAT (P83883) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_PIG (P83884) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_MOUSE (P83882) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_ICTPU (P61487) 60S ribosomal protein L36a|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_HUMAN (P83881) 60S ribosomal protein L36a (60S ribosomal protein L44)|
           (Migration-inducing gene 6 protein)
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_FUGRU (P61486) 60S ribosomal protein L36a (60S ribosomal protein L44)|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36A_BRARE (P61485) 60S ribosomal protein L36a|
          Length = 105

 Score =  118 bits (295), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL44_BRUMA (P90702) 60S ribosomal protein L44|
          Length = 104

 Score =  117 bits (293), Expect = 3e-26
 Identities = 51/82 (62%), Positives = 61/82 (74%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           HT+HKVTQYKKGK+S  AQG+RRYD KQ G+GGQTKP+F         IVL+++C  CKH
Sbjct: 18  HTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKH 77

Query: 295 YSQRAIKRCKHFEIGGDKKGKG 360
             Q  IKRCKHFE+GG KK +G
Sbjct: 78  RKQLPIKRCKHFELGGQKKTRG 99
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>RL36L_HUMAN (Q969Q0) 60S ribosomal protein L36a-like|
          Length = 105

 Score =  117 bits (292), Expect = 3e-26
 Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL36L_PONPY (Q5R9D2) 60S ribosomal protein L36a-like|
          Length = 105

 Score =  115 bits (288), Expect = 1e-25
 Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQC--QSC 288
           H  HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F         IVL+L+C   +C
Sbjct: 17  HQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNC 76

Query: 289 KHYSQRAIKRCKHFEIGGDKKGKG 360
           +     AIKRCKHFE+GGDKK KG
Sbjct: 77  RSKRMLAIKRCKHFELGGDKKRKG 100
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>RL44_AEDTR (Q9NB33) 60S ribosomal protein L44|
          Length = 103

 Score =  113 bits (282), Expect = 5e-25
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           H +HKVTQYKK K+  ++QG+RRYDRKQ G+GGQTKP+F         IVL+++C  CK+
Sbjct: 17  HRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKY 76

Query: 295 YSQRAIKRCKHFEIGGDKKGKG 360
             Q  +KRCKHFE+GGDKK KG
Sbjct: 77  RKQTPLKRCKHFELGGDKKRKG 98
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>RL44_PLAF7 (O97231) 60S ribosomal protein L44|
          Length = 103

 Score =  108 bits (269), Expect = 2e-23
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           HT+HKV+QYKKGK+ LS+ G+RRYD KQ G+GGQTKPVF         IVLKL+C  CK 
Sbjct: 18  HTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKK 77

Query: 295 YSQRAIKRCKHFEIGGDKKGKGTSLF 372
              + +KRCK FE+G DKK KG +++
Sbjct: 78  KRFQTMKRCKTFEMGADKKKKGGAVY 103
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>RL44_TRYBB (P17843) 60S ribosomal protein L44|
          Length = 105

 Score =  101 bits (252), Expect = 1e-21
 Identities = 48/79 (60%), Positives = 53/79 (67%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           H   KV QYK GK  L A+GKRRYDRKQSGYGGQTKP+FH        IVLKLQC +CK 
Sbjct: 19  HKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKS 78

Query: 295 YSQRAIKRCKHFEIGGDKK 351
             Q  +KR KHFE+   KK
Sbjct: 79  IIQNVLKRTKHFELNDKKK 97
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>RL44_THEAC (Q9HIX1) 50S ribosomal protein L44E|
          Length = 93

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 34/74 (45%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 294
           HT H V + +K K S    G+RR+ R  SGYGG  +P F         I L+L C  C  
Sbjct: 17  HTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHK 76

Query: 295 YSQRAIKRCKHFEI 336
                  R K FEI
Sbjct: 77  AITPPGIRAKKFEI 90
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>RL44_PYRFU (Q8U475) 50S ribosomal protein L44E|
          Length = 94

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 291
           HT+HKV + KK   S  + G+RR+ R   GYGG  +P           + L+ +C  C K
Sbjct: 17  HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGK 76

Query: 292 HYSQRAIKRCKHFEI 336
            +++    R K FE+
Sbjct: 77  AHTRGRGFRVKKFEL 91
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>RL44_PYRAB (Q9UXZ2) 50S ribosomal protein L44E|
          Length = 94

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 291
           HT+HKV + KK   S  + G+RR+ R   GYGG  +P           + L+ +C  C K
Sbjct: 17  HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTVCGK 76

Query: 292 HYSQRAIKRCKHFEI 336
            +++    R K FE+
Sbjct: 77  AHTRGRGFRVKKFEL 91
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>RL44_METJA (P54027) 50S ribosomal protein L44E|
          Length = 94

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 288
           HT+H V + KKGK S    G+R++ R  +GYGG  +P+          I L+ +C  C
Sbjct: 17  HTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPL-PDRSKPVKKIDLRFKCTEC 73
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>RL44_PYRHO (O59603) 50S ribosomal protein L44E|
          Length = 94

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 291
           HT+HKV + K+   S  + G+RR+ R   GYGG  +P           + L+  C  C +
Sbjct: 17  HTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVKKLDLRFVCTVCGR 76

Query: 292 HYSQRAIKRCKHFEI 336
            +++    R K FE+
Sbjct: 77  AHTRGKGFRVKRFEL 91
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>RL44_METTH (O27365) 50S ribosomal protein L44E|
          Length = 92

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 288
           HT+H+V + K+ K S    G+R++ R  +GY G  +P+          + L+L+C+ C
Sbjct: 17  HTVHEVLESKRRKASELKWGQRQFRRVTAGYRGYPRPL-PSGNKPVKKLDLRLKCKEC 73
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>RL44_AERPE (Q9YF00) 50S ribosomal protein L44E|
          Length = 63

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 166 AQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 288
           A G+RRY RKQ GYG Q +P            VL + C  C
Sbjct: 2   ALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVC 42
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>RL44_ARCFU (O28936) 50S ribosomal protein L44E|
          Length = 93

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
 Frame = +1

Query: 115 HTLHKVTQYKKGKDS----LSAQGKRRYD----RKQSGYGGQTKPVFHXXXXXXXXIVLK 270
           HTLH+V +  KGK S    ++ Q KRR       K S   G  KP           + ++
Sbjct: 17  HTLHEVERVSKGKASSLNWINRQKKRRGKVGNLGKFSKVPGGDKP--------TKRVNIR 68

Query: 271 LQCQSCKHYSQRAIKRCKHFEI 336
            +C  CK    R   R K FE+
Sbjct: 69  FRCTECKKAHHRPTWRAKRFEL 90
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>ATG17_EMENI (Q5AZC0) Autophagy-related protein 17|
          Length = 588

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 36  VHRRFRSHGERSEDQEDLLQEQGVQEAH 119
           VH  FR  GE  +   D + E+GV+E H
Sbjct: 128 VHASFRPEGEEPKSLHDFVDERGVEELH 155
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>RNZ2_RAT (Q8CGS5) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11)|
           (Ribonuclease Z 2) (RNase Z 2) (tRNase Z 2) (tRNA 3
           endonuclease 2) (ElaC homolog protein 2)
          Length = 827

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 446 LKIIHSSCGKFWHNILNITARSSS*KRDVPLPFLSPPISKCLHLLIARCE 297
           L+  H+ C +  H+I  I A+      +VP    SPP+ + + LL+  C+
Sbjct: 587 LQQYHNQCQEILHHISMIPAKCLQKGAEVP----SPPVERLISLLLETCD 632
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>UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Uncoordinated|
           protein 18)
          Length = 591

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = -2

Query: 548 HKLQNKMLH--------SPWVITVVDTIAKQMLHSPWVITRNLKIIHSSCGKFWHNIL-- 399
           HKL N ++         S W + +VDT+A +ML              SSC K  HNI+  
Sbjct: 9   HKLLNDVIRPLKKGDGRSAWNVLIVDTLAMRML--------------SSCCKM-HNIMEE 53

Query: 398 NITARSSS*KRDVPLPFL 345
            IT      KR  PLP L
Sbjct: 54  GITIVEDLNKRREPLPTL 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,212,047
Number of Sequences: 219361
Number of extensions: 1840564
Number of successful extensions: 5258
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5242
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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