Clone Name | baak4j20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ALG1_YEAST (P16661) Chitobiosyldiphosphodolichol beta-mannosyltr... | 31 | 2.8 | 2 | TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag) | 30 | 6.3 | 3 | RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... | 30 | 6.3 | 4 | MATK_CYCPA (Q9MV47) Maturase K (Intron maturase) | 29 | 8.2 |
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>ALG1_YEAST (P16661) Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC| 2.4.1.142) (GDP-mannose-dolichol diphosphochitobiose mannosyltransferase) (GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase) (Beta-1,4-mannosyltransferase) (Asparagine-linked gl Length = 449 Score = 30.8 bits (68), Expect = 2.8 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = -1 Query: 510 TGMDVLLAFVSFSGSLLPRRMVYCFLHPLYLEST*LLSIFS-YEIYGLSIHAAFSCFLLS 334 TG +++ + + + S+L + F HPL L S + IFS + Y L++ A +L+ Sbjct: 153 TGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKYLIQ 212 Query: 333 QTNLVPKR 310 +L PKR Sbjct: 213 SFHLNPKR 220
>TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag)| Length = 476 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 130 SLVASKLRLPYFGRGTANLSPPRLVQQLPSQRPACSSSN 14 S+ A ++ + GR TANLSP L+ R C+S + Sbjct: 250 SVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGS 288
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 29.6 bits (65), Expect = 6.3 Identities = 30/119 (25%), Positives = 51/119 (42%) Frame = -1 Query: 531 LIITWINTGMDVLLAFVSFSGSLLPRRMVYCFLHPLYLEST*LLSIFSYEIYGLSIHAAF 352 L+ T I G ++ + G + R ++ L +L L +++Y G S+H Sbjct: 846 LVFTGIKNGSVSMVREIETIGKVRHRNLIK--LEEFWLRKEYGLILYTYMENG-SLHD-- 900 Query: 351 SCFLLSQTNLVPKRPSSTSTRIMLSTWKVQEIFLFTFKCQPAIHEQQRNINENISPRNI 175 +L +TN P +P STR ++ + F C PAI ++ +I P NI Sbjct: 901 ---ILHETN--PPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAI------VHRDIKPMNI 948
>MATK_CYCPA (Q9MV47) Maturase K (Intron maturase)| Length = 519 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +3 Query: 66 GGERFAVPRPK*G---SLSFDATREKRARLFHTQWFKRAKYC 182 G E F PK SLSF TR +R R++H+ +R +C Sbjct: 461 GSELFTKSSPKERELISLSFSKTRSQRERIWHSDILQRNPFC 502 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,686,205 Number of Sequences: 219361 Number of extensions: 1459545 Number of successful extensions: 2985 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2920 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2985 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)