ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPT2A_SHEEP (O97704) Sodium-dependent phosphate transport protei... 30 1.2
2YK27_YEAST (P36140) Hypothetical 12.3 kDa protein in GAP1-NAP1 i... 28 4.7
3VG67_ICHV1 (Q00107) Hypothetical gene 67 protein 28 4.7

>NPT2A_SHEEP (O97704) Sodium-dependent phosphate transport protein 2A|
           (Sodium/phosphate cotransporter 2A) (Na(+)/Pi
           cotransporter 2A) (Sodium-phosphate transport protein
           2A) (Na(+)-dependent phosphate cotransporter 2A)
           (NaPi-2a) (Solute carrier family 34
          Length = 639

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 57  SPDEIPEPMYRAEVRN*VQHAATLRTNATVASCTHVLIN 173
           +P E+P PM RAE      + + +  NAT+  C H+ ++
Sbjct: 309 NPTEVPTPMPRAEA-----NTSRMLRNATLEKCNHIFVD 342



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>YK27_YEAST (P36140) Hypothetical 12.3 kDa protein in GAP1-NAP1 intergenic|
           region
          Length = 101

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 206 YVYVHAYMHLVVY*YVRAASNSSIGT*RSCV 114
           Y+Y+H Y+++ +Y YV    N+ + T   CV
Sbjct: 12  YMYIHIYIYICMYTYVYKYMNTVMTTLAKCV 42



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>VG67_ICHV1 (Q00107) Hypothetical gene 67 protein|
          Length = 1556

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 54  ASPDEIPEPMYRAEVRN*VQHAATLRTNATVAS 152
           A PD +PEP+Y AE    V H   LR  A V S
Sbjct: 345 APPDGVPEPLYSAEYVT-VTHDRELRAYACVTS 376


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,170,796
Number of Sequences: 219361
Number of extensions: 425748
Number of successful extensions: 753
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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