ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT001352.1| Drosophila melanogaster AT26615 full insert cDNA 42 0.59
2gb|AY458636.1| Uncultured bacterium 439 clone EBAC750-10B11 geno... 40 2.3
3gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosom... 40 2.3
4emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on ch... 40 2.3
5gb|AC087283.10| Homo sapiens chromosome 15, clone RP11-597G23, c... 40 2.3
6gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, comple... 40 2.3
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
8emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in... 40 2.3
9dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
10dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 2.3
12gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, comple... 40 2.3
13ref|NM_201108.1| Danio rerio zgc:63693 (zgc:63693), mRNA 38 9.3
14gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosom... 38 9.3
15gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, compl... 38 9.3
16gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 38 9.3
17gb|AC074258.6| Trypanosoma brucei chromosome 6 clone RPCI93-2N9,... 38 9.3
18gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosom... 38 9.3
19gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.3
20gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.3
21gb|BC055208.1| Danio rerio zgc:63693, mRNA (cDNA clone MGC:63693... 38 9.3
22ref|NM_027315.2| Mus musculus ubiquitin-conjugating enzyme E2Q (... 38 9.3
23emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in... 38 9.3
24emb|CT009681.2| Pan troglodytes chromosome X BAC PTB-134F20, com... 38 9.3
25gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1... 38 9.3
26ref|XM_812385.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.3
27emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, ... 38 9.3
28emb|CR753865.8| Zebrafish DNA sequence from clone DKEY-172B2 in ... 38 9.3
29gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, com... 38 9.3
30gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, com... 38 9.3
31emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in ... 38 9.3
32emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 o... 38 9.3
33emb|AL031542.1|HS1147O16 Human DNA sequence from clone RP5-1147O... 38 9.3
34emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16... 38 9.3
35gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Can... 38 9.3
36gb|AY112699.1| Mus musculus ubiquitin-conjugating enzyme E2Q (Ub... 38 9.3
37emb|CR450817.6| Zebrafish DNA sequence from clone DKEYP-74B4 in ... 38 9.3
38emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chr... 38 9.3
39emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 i... 38 9.3
40emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in ... 38 9.3
41gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, compl... 38 9.3
42emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in... 38 9.3
43gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, com... 38 9.3
44gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, compl... 38 9.3
45gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold 38 9.3
46emb|BX005216.10| Zebrafish DNA sequence from clone CH211-286O21,... 38 9.3
47gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome... 38 9.3
48gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosom... 38 9.3
49emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, ... 38 9.3
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
51dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
52dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
53gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosom... 38 9.3
54gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, comple... 38 9.3
55emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 i... 38 9.3
56emb|BX649469.8| Zebrafish DNA sequence from clone DKEY-273O8 in ... 38 9.3
57emb|BX072561.8| Zebrafish DNA sequence from clone CH211-157C18 i... 38 9.3
58emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, ... 38 9.3
59dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
60dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.3
61emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in ... 38 9.3
62emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 i... 38 9.3
63emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 ... 38 9.3
64emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chr... 38 9.3
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.3
66emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 38 9.3
67emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 38 9.3
68emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 38 9.3
69gb|AC003101.1|AC003101 Homo sapiens chromosome 17, clone HRPC41C... 38 9.3
70gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome... 38 9.3
71emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chr... 38 9.3
72emb|X17579.1|HSHS5R Human specific HS5 DNA 38 9.3 
>gb|BT001352.1| Drosophila melanogaster AT26615 full insert cDNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 aagaatgcaaaggggaaatgt 133
           |||||||||||||||||||||
Sbjct: 771 aagaatgcaaaggggaaatgt 791
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>gb|AY458636.1| Uncultured bacterium 439 clone EBAC750-10B11 genomic sequence
          Length = 39858

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tttgttatgacttatgaaat 168
             ||||||||||||||||||||
Sbjct: 36549 tttgttatgacttatgaaat 36568
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>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete
             sequence
          Length = 225685

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tttttctgattccgcctttg 152
             ||||||||||||||||||||
Sbjct: 31580 tttttctgattccgcctttg 31599
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>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a
             novel gene (2210415F13Rik), an NADH dehydrogenase
             (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel
             pseudogene, a novel gene (1810065E05Rik), a novel gene
             similar to rat solute carrier family 11 member 1
             (Slc11a1), a novel gene, the  Olfr30 gene for olfactory
             receptor 30, an olfactory receptor (MOR284-1P) pseudogene,
             the gene for olfactory receptor MOR284-2 (LOC216774),  a
             novel gene similar to MOR275 (LOC193140), a ribosomal
             protein L24 (Rpl24) pseudogene, the gene for olfactory
             receptor MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box
             polypeptide 5 (Ddx5) pseudogene, an olfactory receptor
             (MOR275-3) pseudogene and a CpG island, complete sequence
          Length = 191700

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   cattcttttcccaaagaatg 119
             ||||||||||||||||||||
Sbjct: 38521 cattcttttcccaaagaatg 38502
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>gb|AC087283.10| Homo sapiens chromosome 15, clone RP11-597G23, complete sequence
          Length = 207548

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tgtcattcttttcccaaaga 116
             ||||||||||||||||||||
Sbjct: 77336 tgtcattcttttcccaaaga 77355
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>gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, complete sequence
          Length = 184862

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    tcttttcccaaagaatgcaa 122
              ||||||||||||||||||||
Sbjct: 134109 tcttttcccaaagaatgcaa 134090
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 61       cagatttgctggcctatgcc 80
                ||||||||||||||||||||
Sbjct: 19238707 cagatttgctggcctatgcc 19238688
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>emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in linkage group 16,
              complete sequence
          Length = 158356

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     tcattcttttcccaaagaatgcaa 122
              |||||||||||||||| |||||||
Sbjct: 123186 tcattcttttcccaaacaatgcaa 123209
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>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001B01
          Length = 147585

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    cagatttgctggcctatgcc 80
             ||||||||||||||||||||
Sbjct: 76471 cagatttgctggcctatgcc 76452
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>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0043B22
          Length = 158857

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     cagatttgctggcctatgcc 80
              ||||||||||||||||||||
Sbjct: 142192 cagatttgctggcctatgcc 142173
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      gtgctgaatctgcctgtaca 62
               ||||||||||||||||||||
Sbjct: 1171636 gtgctgaatctgcctgtaca 1171617
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>gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, complete sequence
          Length = 208505

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tttttctgattccgcctttg 152
             ||||||||||||||||||||
Sbjct: 20626 tttttctgattccgcctttg 20607
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>ref|NM_201108.1| Danio rerio zgc:63693 (zgc:63693), mRNA
          Length = 1873

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 99   tcattcttttcccaaagaa 117
            |||||||||||||||||||
Sbjct: 1737 tcattcttttcccaaagaa 1719
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>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete
            sequence
          Length = 136974

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 62   agatttgctggcctatgcctctg 84
            |||||||||||||| ||||||||
Sbjct: 4639 agatttgctggcctctgcctctg 4617
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>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence
          Length = 220872

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    agaactgcatgccctgttt 32
             |||||||||||||||||||
Sbjct: 30666 agaactgcatgccctgttt 30684
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 160     ttatgaaatgtttctccac 178
               |||||||||||||||||||
Sbjct: 1053735 ttatgaaatgtttctccac 1053717
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>gb|AC074258.6| Trypanosoma brucei chromosome 6 clone RPCI93-2N9, complete sequence
          Length = 148326

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 160   ttatgaaatgtttctccac 178
             |||||||||||||||||||
Sbjct: 32618 ttatgaaatgtttctccac 32636
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>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence
          Length = 190608

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     agatttgctggcctatgcctctg 84
              |||||||||||||| ||||||||
Sbjct: 187359 agatttgctggcctctgcctctg 187381
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>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05,
              complete sequence
          Length = 127330

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 153    ttatgacttatgaaatgtt 171
              |||||||||||||||||||
Sbjct: 101944 ttatgacttatgaaatgtt 101962
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J22, complete sequence
          Length = 173903

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 153   ttatgacttatgaaatgtt 171
             |||||||||||||||||||
Sbjct: 63578 ttatgacttatgaaatgtt 63596
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>gb|BC055208.1| Danio rerio zgc:63693, mRNA (cDNA clone MGC:63693 IMAGE:5916407),
            complete cds
          Length = 1873

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 99   tcattcttttcccaaagaa 117
            |||||||||||||||||||
Sbjct: 1737 tcattcttttcccaaagaa 1719
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>ref|NM_027315.2| Mus musculus ubiquitin-conjugating enzyme E2Q (putative) (Ube2q),
            mRNA
          Length = 3094

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 90   acaaacgtgtcattcttttcccaaaga 116
            |||||||||| ||| ||||||||||||
Sbjct: 1812 acaaacgtgtaattgttttcccaaaga 1786
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>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11,
              complete sequence
          Length = 158354

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     tcattcttttcccaaagaatgca 121
              |||||||||||||||| ||||||
Sbjct: 100439 tcattcttttcccaaacaatgca 100417
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>emb|CT009681.2| Pan troglodytes chromosome X BAC PTB-134F20, complete sequence
          Length = 180303

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     tctgcctgtacagatttgc 69
              |||||||||||||||||||
Sbjct: 128896 tctgcctgtacagatttgc 128878
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>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence
          Length = 204558

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 111    caaagaatgcaaaggggaa 129
              |||||||||||||||||||
Sbjct: 181120 caaagaatgcaaaggggaa 181102
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>ref|XM_812385.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508347.80) partial mRNA
          Length = 1779

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 113  aagaatgcaaaggggaaat 131
            |||||||||||||||||||
Sbjct: 1582 aagaatgcaaaggggaaat 1600
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>emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, complete sequence
          Length = 160551

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 71545 tcattcttttcccaaacaatgca 71523
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>emb|CR753865.8| Zebrafish DNA sequence from clone DKEY-172B2 in linkage group 14,
             complete sequence
          Length = 134371

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 58928 tcattcttttcccaaacaatgca 58950
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>gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, complete sequence
          Length = 239053

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    caaagaatgcaaaggggaa 129
              |||||||||||||||||||
Sbjct: 168839 caaagaatgcaaaggggaa 168857
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>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence
          Length = 227330

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     agaactgcatgccctgttt 32
              |||||||||||||||||||
Sbjct: 198521 agaactgcatgccctgttt 198539
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>emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in linkage group 25, complete
              sequence
          Length = 219164

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     tcattcttttcccaaagaatgca 121
              |||||||||||||||| ||||||
Sbjct: 104991 tcattcttttcccaaacaatgca 104969
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>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3
             Contains part of the gene for HBxAg transactivated protein
             2 (XTP2), complete sequence
          Length = 99886

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   tttcccaaagaatgcaaag 124
             |||||||||||||||||||
Sbjct: 40416 tttcccaaagaatgcaaag 40434
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>emb|AL031542.1|HS1147O16 Human DNA sequence from clone RP5-1147O16 on chromosome Xp21.1-21.3
             Contains part of the DMD gene for dystrophin (muscular
             dystrophy, Duchenne and Becker types), complete sequence
          Length = 132290

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tctgcctgtacagatttgc 69
             |||||||||||||||||||
Sbjct: 63242 tctgcctgtacagatttgc 63260
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>emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16 on chromosome 6q24 Contains
             GSS, complete sequence
          Length = 87552

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 115   gaatgcaaaggggaaatgt 133
             |||||||||||||||||||
Sbjct: 40159 gaatgcaaaggggaaatgt 40141
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>gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121201

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   gaatgcaaaggggaaatgt 133
             |||||||||||||||||||
Sbjct: 32340 gaatgcaaaggggaaatgt 32358
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>gb|AY112699.1| Mus musculus ubiquitin-conjugating enzyme E2Q (Ube2q) mRNA, complete
            cds
          Length = 3094

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 90   acaaacgtgtcattcttttcccaaaga 116
            |||||||||| ||| ||||||||||||
Sbjct: 1812 acaaacgtgtaattgttttcccaaaga 1786
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>emb|CR450817.6| Zebrafish DNA sequence from clone DKEYP-74B4 in linkage group 25,
             complete sequence
          Length = 196897

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 27149 tcattcttttcccaaataatgca 27171
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>emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chromosome 4 Contains a
             ribosomal protein S6 (Rps6) pseudogene and a novel gene,
             complete sequence
          Length = 231582

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    tgcatgccctgttttccct 37
             |||||||||||||||||||
Sbjct: 46188 tgcatgccctgttttccct 46206
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>emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 in linkage group 24,
              complete sequence
          Length = 174489

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     tttcccttgttggtgctga 49
              |||||||||||||||||||
Sbjct: 116141 tttcccttgttggtgctga 116123
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>emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in linkage group 11,
             complete sequence
          Length = 149012

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 85978 tcattcttttcccaaacaatgca 86000
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>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence
          Length = 177251

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     ctggcctatgcctctgttt 87
              |||||||||||||||||||
Sbjct: 125718 ctggcctatgcctctgttt 125700
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>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1,
             complete sequence
          Length = 216540

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 17211 tcattcttttcccaaacaatgca 17189
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>gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, complete sequence
          Length = 172790

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 154    tatgacttatgaaatgttt 172
              |||||||||||||||||||
Sbjct: 116591 tatgacttatgaaatgttt 116609
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>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    ctggcctatgcctctgttt 87
             |||||||||||||||||||
Sbjct: 38083 ctggcctatgcctctgttt 38065
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>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold
          Length = 644818

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 149   tttgttatgacttatgaaa 167
             |||||||||||||||||||
Sbjct: 10634 tttgttatgacttatgaaa 10616
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>emb|BX005216.10| Zebrafish DNA sequence from clone CH211-286O21, complete sequence
          Length = 163291

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 99     tcattcttttcccaaagaatgca 121
              ||||||||||||||||| |||||
Sbjct: 149197 tcattcttttcccaaaggatgca 149219
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>gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome 9, complete sequence
          Length = 156478

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    tggcctatgcctctgttta 88
             |||||||||||||||||||
Sbjct: 96497 tggcctatgcctctgttta 96515
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>gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosome 13, complete
             sequence
          Length = 166266

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     gttctgtaggagagaactg 20
             |||||||||||||||||||
Sbjct: 22785 gttctgtaggagagaactg 22803
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>emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, complete sequence
          Length = 169110

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 18096 tcattcttttcccaaacaatgca 18074
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 147      cctttgttatgacttatga 165
                |||||||||||||||||||
Sbjct: 23936239 cctttgttatgacttatga 23936221
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 151     tgttatgacttatgaaatg 169
               |||||||||||||||||||
Sbjct: 5609105 tgttatgacttatgaaatg 5609087
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 153     ttatgacttatgaaatgtt 171
               |||||||||||||||||||
Sbjct: 2617058 ttatgacttatgaaatgtt 2617076
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>gb|AC154331.1| Mus musculus BAC clone RP23-256F11 from chromosome 13, complete
             sequence
          Length = 175414

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gttctgtaggagagaactg 20
             |||||||||||||||||||
Sbjct: 52962 gttctgtaggagagaactg 52944
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>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 125    gggaaatgtttttctgatt 143
              |||||||||||||||||||
Sbjct: 199608 gggaaatgtttttctgatt 199626
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>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18,
              complete sequence
          Length = 179945

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     tcattcttttcccaaagaatgca 121
              |||||||||||||||| ||||||
Sbjct: 140130 tcattcttttcccaaacaatgca 140108
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>emb|BX649469.8| Zebrafish DNA sequence from clone DKEY-273O8 in linkage group 7,
             complete sequence
          Length = 80705

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 66068 tcattcttttcccaaacaatgca 66046
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>emb|BX072561.8| Zebrafish DNA sequence from clone CH211-157C18 in linkage group 8,
             complete sequence
          Length = 179087

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 95564 tcattcttttcccaaacaatgca 95542
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>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence
          Length = 168383

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 47400 tcattcttttcccaaacaatgca 47422
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>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0412D08
          Length = 150188

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 151   tgttatgacttatgaaatg 169
             |||||||||||||||||||
Sbjct: 64481 tgttatgacttatgaaatg 64463
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>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0035F08
          Length = 167446

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 151    tgttatgacttatgaaatg 169
              |||||||||||||||||||
Sbjct: 135333 tgttatgacttatgaaatg 135315
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>emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20,
             complete sequence
          Length = 139851

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 35209 tcattcttttcccaaacaatgca 35231
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>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19,
             complete sequence
          Length = 151598

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 39801 tcattcttttcccaaacaatgca 39779
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>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17,
              complete sequence
          Length = 211277

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 99     tcattcttttcccaaagaatgca 121
              |||||||||||||||| ||||||
Sbjct: 148573 tcattcttttcccaaacaatgca 148595
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>emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chromosome 9, complete
              sequence
          Length = 193947

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     tggcctatgcctctgttta 88
              |||||||||||||||||||
Sbjct: 121125 tggcctatgcctctgttta 121143
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 147      cctttgttatgacttatga 165
                |||||||||||||||||||
Sbjct: 23864445 cctttgttatgacttatga 23864427
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>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    tcattcttttcccaaagaatgca 121
             |||||||||||||||| ||||||
Sbjct: 60387 tcattcttttcccaaacaatgca 60409
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 147   cctttgttatgacttatga 165
             |||||||||||||||||||
Sbjct: 36943 cctttgttatgacttatga 36961
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>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 147    cctttgttatgacttatga 165
              |||||||||||||||||||
Sbjct: 151157 cctttgttatgacttatga 151175
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>gb|AC003101.1|AC003101 Homo sapiens chromosome 17, clone HRPC41C23, complete sequence
          Length = 208396

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     gctgaatctgcctgtacag 63
              |||||||||||||||||||
Sbjct: 171559 gctgaatctgcctgtacag 171541
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>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence
          Length = 149387

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    agatttgctggcctatgcctctg 84
             |||||||||||||| ||||||||
Sbjct: 91571 agatttgctggcctctgcctctg 91549
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>emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chromosome 2, complete
              sequence
          Length = 130872

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     tgccctgttttcccttgtt 41
              |||||||||||||||||||
Sbjct: 119032 tgccctgttttcccttgtt 119050
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>emb|X17579.1|HSHS5R Human specific HS5 DNA
          Length = 3768

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   tgctggcctatgcctctgt 85
            |||||||||||||||||||
Sbjct: 2025 tgctggcctatgcctctgt 2043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,012,037
Number of Sequences: 3902068
Number of extensions: 2012037
Number of successful extensions: 148960
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148409
Number of HSP's gapped (non-prelim): 551
length of query: 188
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 166
effective length of database: 17,147,199,772
effective search space: 2846435162152
effective search space used: 2846435162152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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