ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009447.1| Triticum aestivum clone wlmk8.pk0015.h6:fis, full... 519 e-144
2ref|XM_480615.1| Oryza sativa (japonica cultivar-group), mRNA 228 1e-56
3ref|XM_480614.1| Oryza sativa (japonica cultivar-group), mRNA 228 1e-56
4dbj|AK102764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
5dbj|AK064336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
7dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
8dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
9gb|AY104212.1| Zea mays PCO098672 mRNA sequence 105 1e-19
10ref|NM_179909.1| Arabidopsis thaliana IMP cyclohydrolase/ phosph... 62 2e-06
11gb|AY133727.1| Arabidopsis thaliana clone U20082 putative phosph... 62 2e-06
12gb|AY091122.1| Arabidopsis thaliana putative phosphoribosylamino... 62 2e-06
13emb|BX821285.1|CNS0A98A Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
14gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map... 56 1e-04
15gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 46 0.10
16gb|AY193836.1| Vigna unguiculata aminoimidazolecarboximide ribon... 46 0.10
17emb|AL360181.37| Human DNA sequence from clone RP11-122K13 on ch... 42 1.6
18gb|BC084931.1| Xenopus laevis cDNA clone IMAGE:6863628 40 6.4
19emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on ch... 40 6.4
20emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536... 40 6.4
21emb|AL121901.20|HSBA49G10 Human DNA sequence from clone RP11-49G... 40 6.4
22emb|X55107.1|MLTRNATH M. luteus gene for tRNA-Thr 40 6.4
23dbj|AB183847.1| Streptococcus suis purH, purD genes, partial cds... 40 6.4
24dbj|AB183846.1| Streptococcus suis purH, purD genes, partial cds... 40 6.4
25dbj|AB183833.1| Streptococcus suis purH, purD genes, partial cds... 40 6.4
26dbj|AB183832.1| Streptococcus suis purH, sepS6, purD genes, part... 40 6.4
27dbj|AB183831.1| Streptococcus suis purH, sepS5, purD genes, part... 40 6.4
28dbj|AB183830.1| Streptococcus suis purH, sepS4, purD genes, part... 40 6.4
29dbj|AB058944.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ss... 40 6.4
30dbj|AB058943.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ss... 40 6.4
31dbj|AB058942.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ss... 40 6.4
32dbj|AB058941.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ss... 40 6.4
33dbj|AB045609.1| Streptococcus suis purF, purM, purN, purH, ssuMA... 40 6.4

>gb|BT009447.1| Triticum aestivum clone wlmk8.pk0015.h6:fis, full insert mRNA
           sequence
          Length = 1206

 Score =  519 bits (262), Expect = e-144
 Identities = 373/410 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
           ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 544 tgcatgctgggcatggggagcgggcagccaaacagggtggacagcctgaggatcgccttc 603

                                                                       
Query: 62  aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccattt 121
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 604 aggaaagcaggggaggccgccaagggagccgctctggccagcgacgccttcttcccattc 663

                                                                       
Query: 122 gcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcct 181
            | |||||||| ||||||||||| || || |||||||||||||| |||||||||||||||
Sbjct: 664 ccttggaaggatgccgtggaggaagcgtgtgagaacggcatcggcacgatcgcgcagcct 723

                                                                       
Query: 182 ggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctc 241
           ||||||||||||||||||||||||||||| ||||||||||| |||||||  || ||||||
Sbjct: 724 ggcggcagcatgagggacaaggatgccgttgactgctgcaataagtacggcgtgtccctc 783

                                                                       
Query: 242 ctcttcactggcgtccgccacttcaggcactgagcctaacctgagtccataaggtcatat 301
           |||||||| ||||||||||||||||||||||||||||||||||||  | ||||| | |||
Sbjct: 784 ctcttcaccggcgtccgccacttcaggcactgagcctaacctgagcacttaaggccgtat 843

                                                                       
Query: 302 cactggtctactgttagtcagtctgccgcggaaactcgcggatgtttgtcgcaataagac 361
           ||| ||||||  | ||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 844 caccggtctatcggtagtcagtccgccgcggaaacttgcggatgtttgtcgcaataagac 903

                                                             
Query: 362 aggcgcaggtggtcttgcgtccaactaggaataactgtatgacggcggcg 411
           ||||||||||| |  || |||||||||||| ||| |||||||||| ||||
Sbjct: 904 aggcgcaggtgattctgagtccaactaggattaattgtatgacggtggcg 953



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 446  tcacattgctgagccagcagcggctg 471
            ||||||||||||||||||||||||||
Sbjct: 998  tcacattgctgagccagcagcggctg 1023



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>ref|XM_480615.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2107

 Score =  228 bits (115), Expect = 1e-56
 Identities = 235/275 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
            |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 1592 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 1651

                                                                        
Query: 62   aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccattt 121
            ||||||||||| ||||  ||||| ||||||||| ||||||| || || ||||||||||| 
Sbjct: 1652 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattc 1711

                                                                        
Query: 122  gcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcct 181
            || ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| |||| 
Sbjct: 1712 gcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccg 1771

                                                                        
Query: 182  ggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctc 241
             |||||||||||||||||   || |||||||||||||||||||||||||  |||||||||
Sbjct: 1772 agcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctc 1831

                                               
Query: 242  ctcttcactggcgtccgccacttcaggcactgagc 276
            |||||||| |||||| | |||||||||||||||||
Sbjct: 1832 ctcttcaccggcgtcaggcacttcaggcactgagc 1866



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>ref|XM_480614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2107

 Score =  228 bits (115), Expect = 1e-56
 Identities = 235/275 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
            |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 1599 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 1658

                                                                        
Query: 62   aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccattt 121
            ||||||||||| ||||  ||||| ||||||||| ||||||| || || ||||||||||| 
Sbjct: 1659 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattc 1718

                                                                        
Query: 122  gcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcct 181
            || ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| |||| 
Sbjct: 1719 gcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccg 1778

                                                                        
Query: 182  ggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctc 241
             |||||||||||||||||   || |||||||||||||||||||||||||  |||||||||
Sbjct: 1779 agcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctc 1838

                                               
Query: 242  ctcttcactggcgtccgccacttcaggcactgagc 276
            |||||||| |||||| | |||||||||||||||||
Sbjct: 1839 ctcttcaccggcgtcaggcacttcaggcactgagc 1873



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>dbj|AK102764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D20, full
            insert sequence
          Length = 2106

 Score =  228 bits (115), Expect = 1e-56
 Identities = 235/275 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
            |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 1598 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 1657

                                                                        
Query: 62   aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccattt 121
            ||||||||||| ||||  ||||| ||||||||| ||||||| || || ||||||||||| 
Sbjct: 1658 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattc 1717

                                                                        
Query: 122  gcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcct 181
            || ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| |||| 
Sbjct: 1718 gcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccg 1777

                                                                        
Query: 182  ggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctc 241
             |||||||||||||||||   || |||||||||||||||||||||||||  |||||||||
Sbjct: 1778 agcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctc 1837

                                               
Query: 242  ctcttcactggcgtccgccacttcaggcactgagc 276
            |||||||| |||||| | |||||||||||||||||
Sbjct: 1838 ctcttcaccggcgtcaggcacttcaggcactgagc 1872



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>dbj|AK064336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G10, full
            insert sequence
          Length = 2123

 Score =  228 bits (115), Expect = 1e-56
 Identities = 235/275 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
            |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 1592 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 1651

                                                                        
Query: 62   aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccattt 121
            ||||||||||| ||||  ||||| ||||||||| ||||||| || || ||||||||||| 
Sbjct: 1652 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccattc 1711

                                                                        
Query: 122  gcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcct 181
            || ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| |||| 
Sbjct: 1712 gcttggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccg 1771

                                                                        
Query: 182  ggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctc 241
             |||||||||||||||||   || |||||||||||||||||||||||||  |||||||||
Sbjct: 1772 agcggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctc 1831

                                               
Query: 242  ctcttcactggcgtccgccacttcaggcactgagc 276
            |||||||| |||||| | |||||||||||||||||
Sbjct: 1832 ctcttcaccggcgtcaggcacttcaggcactgagc 1866



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  159 bits (80), Expect = 1e-35
 Identities = 134/152 (88%)
 Strand = Plus / Plus

                                                                           
Query: 125     tggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcctggc 184
               ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| ||||  ||
Sbjct: 6217306 tggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccgagc 6217365

                                                                           
Query: 185     ggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctcctc 244
               |||||||||||||||   || |||||||||||||||||||||||||  ||||||||||||
Sbjct: 6217366 ggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctcctc 6217425

                                               
Query: 245     ttcactggcgtccgccacttcaggcactgagc 276
               ||||| |||||| | |||||||||||||||||
Sbjct: 6217426 ttcaccggcgtcaggcacttcaggcactgagc 6217457



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                           
Query: 2       tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
               |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 6216666 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 6216725

                                                                          
Query: 62      aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatt 120
               ||||||||||| ||||  ||||| ||||||||| ||||||| || || |||||||||||
Sbjct: 6216726 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccatt 6216784



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>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1734_E04
          Length = 101439

 Score =  159 bits (80), Expect = 1e-35
 Identities = 134/152 (88%)
 Strand = Plus / Plus

                                                                        
Query: 125  tggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcctggc 184
            ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| ||||  ||
Sbjct: 3443 tggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccgagc 3502

                                                                        
Query: 185  ggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctcctc 244
            |||||||||||||||   || |||||||||||||||||||||||||  ||||||||||||
Sbjct: 3503 ggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctcctc 3562

                                            
Query: 245  ttcactggcgtccgccacttcaggcactgagc 276
            ||||| |||||| | |||||||||||||||||
Sbjct: 3563 ttcaccggcgtcaggcacttcaggcactgagc 3594



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
            |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 2803 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 2862

                                                                       
Query: 62   aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatt 120
            ||||||||||| ||||  ||||| ||||||||| ||||||| || || |||||||||||
Sbjct: 2863 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccatt 2921



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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score =  159 bits (80), Expect = 1e-35
 Identities = 134/152 (88%)
 Strand = Plus / Plus

                                                                         
Query: 125   tggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcgcagcctggc 184
             ||||| ||||||||||||||||| ||| |||||||||||||   ||||||| ||||  ||
Sbjct: 80699 tggaacgacgccgtggaggaggcgtgccagaacggcatcggcgtgatcgcggagccgagc 80758

                                                                         
Query: 185   ggcagcatgagggacaaggatgccgtcgactgctgcaacaagtacgatgtctccctcctc 244
             |||||||||||||||   || |||||||||||||||||||||||||  ||||||||||||
Sbjct: 80759 ggcagcatgagggacggcgacgccgtcgactgctgcaacaagtacggcgtctccctcctc 80818

                                             
Query: 245   ttcactggcgtccgccacttcaggcactgagc 276
             ||||| |||||| | |||||||||||||||||
Sbjct: 80819 ttcaccggcgtcaggcacttcaggcactgagc 80850



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                         
Query: 2     tgcatgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttc 61
             |||||| | |||||||| || || |||||||||||  |||| ||  |||| ||||| |||
Sbjct: 80059 tgcatgttaggcatgggaagtggccagccaaacagactggagagtctgagaattgctttc 80118

                                                                        
Query: 62    aggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatt 120
             ||||||||||| ||||  ||||| ||||||||| ||||||| || || |||||||||||
Sbjct: 80119 aggaaagcaggagaggaggccaaaggagctgctttggccagtgatgcattcttcccatt 80177



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>gb|AY104212.1| Zea mays PCO098672 mRNA sequence
          Length = 829

 Score =  105 bits (53), Expect = 1e-19
 Identities = 143/173 (82%)
 Strand = Plus / Plus

                                                                       
Query: 56  gccttcaggaaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttc 115
           ||||| ||||| ||||| ||||  ||||||||||| ||  ||||||||||||||||||| 
Sbjct: 560 gcctttaggaaggcaggagaggaggccaagggagccgcattggccagcgacgccttcttt 619

                                                                       
Query: 116 ccatttgcctggaaggacgccgtggaggaggcatgcgagaacggcatcggtacgatcgcg 175
           || ||||||||||| || || || |||||||| ||| ||||||||||||| |  ||||| 
Sbjct: 620 ccttttgcctggaatgatgctgtcgaggaggcgtgccagaacggcatcggcatcatcgcc 679

                                                                
Query: 176 cagcctggcggcagcatgagggacaaggatgccgtcgactgctgcaacaagta 228
           ||||| || ||||| | || |||| |||| ||||| |  ||||||||||||||
Sbjct: 680 cagccaggaggcagtaagaaggacgaggacgccgttgcgtgctgcaacaagta 732



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>ref|NM_179909.1| Arabidopsis thaliana IMP cyclohydrolase/
            phosphoribosylaminoimidazolecarboxamide formyltransferase
            AT2G35040 mRNA, complete cds
          Length = 1997

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                        
Query: 5    atgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttcagg 64
            |||||||| ||||| ||||| ||||||||| | || || ||  |||| || || |||| |
Sbjct: 1541 atgctggggatgggaagcggacagccaaaccgagtagagagtctgagaatagctttcaag 1600

                                                                        
Query: 65   aaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatttgcc 124
            ||||| |||||||  || || ||||||||  ||||||| ||||| ||||||||||| || 
Sbjct: 1601 aaagctggggaggaagctaaaggagctgccttggccagtgacgcattcttcccattcgct 1660

                                   
Query: 125  tggaaggacgccgtggaggaggc 147
            ||||| || || ||||| |||||
Sbjct: 1661 tggaaagatgcggtggaagaggc 1683



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>gb|AY133727.1| Arabidopsis thaliana clone U20082 putative
            phosphoribosylaminoimidazolecarboxamide formyltransferase
            (At2g35040) mRNA, complete cds
          Length = 1822

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                        
Query: 5    atgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttcagg 64
            |||||||| ||||| ||||| ||||||||| | || || ||  |||| || || |||| |
Sbjct: 1522 atgctggggatgggaagcggacagccaaaccgagtagagagtctgagaatagctttcaag 1581

                                                                        
Query: 65   aaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatttgcc 124
            ||||| |||||||  || || ||||||||  ||||||| ||||| ||||||||||| || 
Sbjct: 1582 aaagctggggaggaagctaaaggagctgccttggccagtgacgcattcttcccattcgct 1641

                                   
Query: 125  tggaaggacgccgtggaggaggc 147
            ||||| || || ||||| |||||
Sbjct: 1642 tggaaagatgcggtggaagaggc 1664



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>gb|AY091122.1| Arabidopsis thaliana putative phosphoribosylaminoimidazolecarboxamide
            formyltransferase (At2g35040) mRNA, complete cds
          Length = 2016

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                        
Query: 5    atgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttcagg 64
            |||||||| ||||| ||||| ||||||||| | || || ||  |||| || || |||| |
Sbjct: 1541 atgctggggatgggaagcggacagccaaaccgagtagagagtctgagaatagctttcaag 1600

                                                                        
Query: 65   aaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatttgcc 124
            ||||| |||||||  || || ||||||||  ||||||| ||||| ||||||||||| || 
Sbjct: 1601 aaagctggggaggaagctaaaggagctgccttggccagtgacgcattcttcccattcgct 1660

                                   
Query: 125  tggaaggacgccgtggaggaggc 147
            ||||| || || ||||| |||||
Sbjct: 1661 tggaaagatgcggtggaagaggc 1683



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>emb|BX821285.1|CNS0A98A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL32ZA02 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1561

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                        
Query: 5    atgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttcagg 64
            |||||||| ||||| ||||| ||||||||| | || || ||  |||| || || |||| |
Sbjct: 1145 atgctggggatgggaagcggacagccaaaccgagtagagagtctgagaatagctttcaag 1204

                                                                        
Query: 65   aaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatttgcc 124
            ||||| |||||||  || || ||||||||  ||||||| ||||| ||||||||||| || 
Sbjct: 1205 aaagctggggaggaagctaaaggagctgccttggccagtgacgcattcttcccattcgct 1264

                                   
Query: 125  tggaaggacgccgtggaggaggc 147
            ||||| || || ||||| |||||
Sbjct: 1265 tggaaagatgcggtggaagaggc 1287



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>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
             sequence
          Length = 108484

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 5     atgctgggcatgggtagcgggcagccaaacagggtggacagcttgaggattgccttcagg 64
             |||||||| ||||| ||||| ||||||||| | || || ||  |||| || || |||| |
Sbjct: 94399 atgctggggatgggaagcggacagccaaaccgagtagagagtctgagaatagctttcaag 94340

                                                                     
Query: 65    aaagcaggggaggctgccaagggagctgctctggccagcgacgccttcttcccatt 120
             ||||| |||||||  || || ||||||||  ||||||| ||||| |||||||||||
Sbjct: 94339 aaagctggggaggaagctaaaggagctgccttggccagtgacgcattcttcccatt 94284



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 98      gccagcgacgccttcttcccatttgcc 124
               |||||||||||||||||||| ||||||
Sbjct: 3274505 gccagcgacgccttcttcccctttgcc 3274479



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>gb|AY193836.1| Vigna unguiculata aminoimidazolecarboximide ribonucleotide
            transformylase/inosine monophosphate cyclohydrolase
            (pur9) mRNA, complete cds
          Length = 1965

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                   
Query: 96   tggccagcgacgccttcttcccatttgcctggaaggacgccgtggaggaggcatg 150
            ||||||| || ||||||||||||||||| ||||| || || ||||| || |||||
Sbjct: 1701 tggccagtgatgccttcttcccatttgcttggaaagatgctgtggaagaagcatg 1755



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>emb|AL360181.37| Human DNA sequence from clone RP11-122K13 on chromosome 10 Contains the
             5' end of the TUBGCP2 gene for tubulin gamma complex
             associated protein 2, the gene for a novel protein, the
             gene for calcyon D1 dopamine receptor-interacting protein
             (CALCYON), an autointegration factor (BANF1) pseudogene, a
             novel gene, the gene for uterine-specific proline-rich
             acidic protein (UPA), gene FLJ34392, the ECHS1 gene for
             enoyl Coenzyme A hydratase, short chain, 1, mitachondrial,
             the gene for peroxisomal N1-acetyl-spermine/spermidine
             oxidase (PAO), a novel gene, the 5' end of a novel gene
             (LOC92170) and ten CpG islands, complete sequence
          Length = 116311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    caggggaggctgccaagggag 89
             |||||||||||||||||||||
Sbjct: 61308 caggggaggctgccaagggag 61288



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>gb|BC084931.1| Xenopus laevis cDNA clone IMAGE:6863628
          Length = 4798

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  tgtctccctcctcttcactg 251
            ||||||||||||||||||||
Sbjct: 1410 tgtctccctcctcttcactg 1391



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>emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on chromosome 10 Contains three
              novel genes and a DEAD/H (Asp-Glu-Ala-Asp/His) box
              polypeptide 18 (Myc-regulated) (DDX18) pseudogene, complete
              sequence
          Length = 158357

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    ttcccatttgcctggaagga 132
              ||||||||||||||||||||
Sbjct: 154302 ttcccatttgcctggaagga 154321



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>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1
             Contains the 5' end of the KCNJ10 gene for potassium
             inwardly-rectifying channel subfamily J member 10, a novel
             gene, the KCNJ9 gene for potassium inwardly-rectifying
             channel subfamily J member 9, the IGSF8 gene for
             immunoglobulin superfamily member 8, the ATP1A2 gene for
             Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the
             ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+)
             polypeptide, the CASQ1 gene for calsequestrin 1
             (fast-twitch, skeletal muscle), a novel gene, the PEA15
             gene for phosphoprotein enriched in astrocytes 15 and four
             CpG islands, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggggaggctgccaagggagc 90
             ||||||||||||||||||||
Sbjct: 99876 ggggaggctgccaagggagc 99895



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>emb|AL121901.20|HSBA49G10 Human DNA sequence from clone RP11-49G10 on chromosome 20 Contains the
             C20orf70 gene, the SOCS2P1 gene for suppressor of cytokine
             signalling 2 pseudogene 1, a novel gene,  the C20orf71
             gene, the PLUNC gene for palate, lung and nasal epithelium
             carcinoma associated, the 5' end of the C20orf114 gene
             encoding a protein similar to murine von ebner minor
             salivary gland protein, the RPL12P3 gene for ribosomal
             protein L12 pseudogene 3, the gene for breast cancer and
             salivary gland expression protein (BASE) and a CpG island,
             complete sequence
          Length = 161593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    caagggagctgctctggcca 101
             ||||||||||||||||||||
Sbjct: 94177 caagggagctgctctggcca 94196



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>emb|X55107.1|MLTRNATH M. luteus gene for tRNA-Thr
          Length = 200

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agggagctgctctggccagc 103
           ||||||||||||||||||||
Sbjct: 101 agggagctgctctggccagc 82



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>dbj|AB183847.1| Streptococcus suis purH, purD genes, partial cds, strain:89-590
          Length = 982

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB183846.1| Streptococcus suis purH, purD genes, partial cds, strain:89-5259
          Length = 983

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB183833.1| Streptococcus suis purH, purD genes, partial cds, strain:14636
          Length = 982

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB183832.1| Streptococcus suis purH, sepS6, purD genes, partial and complete
           cds, strain:2524
          Length = 1841

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB183831.1| Streptococcus suis purH, sepS5, purD genes, partial and complete
           cds, strain:11538
          Length = 1940

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB183830.1| Streptococcus suis purH, sepS4, purD genes, partial and complete
           cds, strain:6407
          Length = 1940

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB058944.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ssuRB, purD genes,
           partial and complete cds, strain: 89-2479
          Length = 4486

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB058943.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ssuRB, purD genes,
           partial and complete cds, strain: 8074
          Length = 4486

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB058942.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ssuRB, purD genes,
           partial and complete cds, strain: 4961
          Length = 4486

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 373 gacgccttcttcccatttgc 392



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>dbj|AB058941.2| Streptococcus suis purH, ssuMA, ssuMB, ssuRA, ssuRB, purD genes,
           partial and complete cds, strain: NIAH11318
          Length = 4487

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacgccttcttcccatttgc 123
           ||||||||||||||||||||
Sbjct: 374 gacgccttcttcccatttgc 393



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>dbj|AB045609.1| Streptococcus suis purF, purM, purN, purH, ssuMA, ssuMB, ssuRA,
            ssuRB, purD, purE genes, partial and complete cds
          Length = 9618

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gacgccttcttcccatttgc 123
            ||||||||||||||||||||
Sbjct: 3958 gacgccttcttcccatttgc 3977


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,459,255
Number of Sequences: 3902068
Number of extensions: 3459255
Number of successful extensions: 65057
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64968
Number of HSP's gapped (non-prelim): 89
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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