ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 1e-44
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 188 1e-44
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 149 1e-32
8gb|AY108197.1| Zea mays PCO065133 mRNA sequence 123 7e-25
9ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
10ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
12dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
13dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
14dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
15dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
16dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
18emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 68 3e-08
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
20dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
21dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
22dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
23gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 46 0.12
24gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Ca... 44 0.48
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.48
26gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 42 1.9
27emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal bra... 42 1.9
28gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 42 1.9
29gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 1.9
30gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 7.5
31gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.5
32gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 7.5
33gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5,... 40 7.5
34gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
35gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 7.5
36gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
37emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.5
38ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc... 40 7.5
39gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.5
40emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 7.5
41emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 7.5
42dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.5
43gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 7.5
44gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.5
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
47gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 7.5
48gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, co... 40 7.5
49dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.5
50gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, ... 40 7.5
51dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
52gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 7.5
53gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 7.5
54gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.5
55gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.5
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
58emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
                ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 32327990 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 32328049

                                                                            
Query: 61       gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
                ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 32328050 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 32328109

                                                   
Query: 121      ccgcgaacacatcttcaccgagggcgaccgcctcg 155
                |||||  ||||||| |||||| | |||||||||||
Sbjct: 32328110 ccgcgcccacatctacaccgacgccgaccgcctcg 32328144
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
             ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 61757 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 61816

                                                                         
Query: 61    gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 61817 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 61876

                                                
Query: 121   ccgcgaacacatcttcaccgagggcgaccgcctcg 155
             |||||  ||||||| |||||| | |||||||||||
Sbjct: 61877 ccgcgcccacatctacaccgacgccgaccgcctcg 61911
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
                ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 32418500 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 32418559

                                                                            
Query: 61       gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
                ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 32418560 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 32418619

                                                   
Query: 121      ccgcgaacacatcttcaccgagggcgaccgcctcg 155
                |||||  ||||||| |||||| | |||||||||||
Sbjct: 32418620 ccgcgcccacatctacaccgacgccgaccgcctcg 32418654
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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 1008 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 1067

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
            ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 1068 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 1127

                                               
Query: 121  ccgcgaacacatcttcaccgagggcgaccgcctcg 155
            |||||  ||||||| |||||| | |||||||||||
Sbjct: 1128 ccgcgcccacatctacaccgacgccgaccgcctcg 1162
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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 1004 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 1063

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
            ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 1064 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 1123

                                               
Query: 121  ccgcgaacacatcttcaccgagggcgaccgcctcg 155
            |||||  ||||||| |||||| | |||||||||||
Sbjct: 1124 ccgcgcccacatctacaccgacgccgaccgcctcg 1158
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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score =  188 bits (95), Expect = 1e-44
 Identities = 140/155 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||
Sbjct: 1068 ggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgat 1127

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
            ||||||||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||
Sbjct: 1128 gcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcac 1187

                                               
Query: 121  ccgcgaacacatcttcaccgagggcgaccgcctcg 155
            |||||  ||||||| |||||| | |||||||||||
Sbjct: 1188 ccgcgcccacatctacaccgacgccgaccgcctcg 1222
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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score =  149 bits (75), Expect = 1e-32
 Identities = 135/155 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||||||||||||||||||||  ||||||| ||| ||||| ||||||| |||||
Sbjct: 974  ggtggtgttcgcgctggcggcggaggggaaggccggggtgaggaacctgctgcggatgat 1033

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
            |||||||||||||||||||||||||||| || |||| ||||||  ||||  |||||||||
Sbjct: 1034 gcgggaggagttcgagctcaccatggcgttcagcggatgcacctcgctcgccgacatcac 1093

                                               
Query: 121  ccgcgaacacatcttcaccgagggcgaccgcctcg 155
            |||||  ||||||| ||| || | ||| |||||||
Sbjct: 1094 ccgcgcccacatctacacggacgccgaacgcctcg 1128
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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score =  123 bits (62), Expect = 7e-25
 Identities = 122/142 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| | |||||||||| ||||||||||||||||   ||||| ||||||||| |
Sbjct: 1147 ggtggtgttctccctggcggcggcgggcgaggccggcgtgtccaacgtcctgcgcatgct 1206

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
            |||||| |||||||||||||||||||||||| |||| ||||||   |||  ||| |||||
Sbjct: 1207 gcgggacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgaaatcac 1266

                                  
Query: 121  ccgcgaacacatcttcaccgag 142
            |||| | |||||| ||||||||
Sbjct: 1267 ccgcaagcacatcatcaccgag 1288
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>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 999  ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 1058

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 1059 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 1118

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 1119 ccgcaaccacgtcatcaccgaggccgac 1146
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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 1040 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 1099

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 1100 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 1159

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 1160 ccgcaaccacgtcatcaccgaggccgac 1187
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                           
Query: 1       ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
               |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 2833034 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 2833093

                                                                           
Query: 61      gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
                || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 2833094 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 2833153

                                           
Query: 121     ccgcgaacacatcttcaccgagggcgac 148
               |||| | ||| || ||||||||| ||||
Sbjct: 2833154 ccgcaaccacgtcatcaccgaggccgac 2833181
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                          
Query: 1      ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
              |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 136595 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 136654

                                                                          
Query: 61     gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
               || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 136655 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 136714

                                          
Query: 121    ccgcgaacacatcttcaccgagggcgac 148
              |||| | ||| || ||||||||| ||||
Sbjct: 136715 ccgcaaccacgtcatcaccgaggccgac 136742
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 3321 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 3380

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 3381 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 3440

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 3441 ccgcaaccacgtcatcaccgaggccgac 3468
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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 1298 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 1357

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 1358 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 1417

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 1418 ccgcaaccacgtcatcaccgaggccgac 1445
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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 999  ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 1058

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 1059 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 1118

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 1119 ccgcaaccacgtcatcaccgaggccgac 1146
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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||||||||| |||||||||||| ||| |||||||| || |||||||||||||  ||| |
Sbjct: 1040 ggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgct 1099

                                                                        
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcac 120
             || || |||||||||||||||||||||||| |||| ||||||   |||  |||||||||
Sbjct: 1100 ccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcac 1159

                                        
Query: 121  ccgcgaacacatcttcaccgagggcgac 148
            |||| | ||| || ||||||||| ||||
Sbjct: 1160 ccgcaaccacgtcatcaccgaggccgac 1187
to top
>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||| ||||| ||||||| | ||| ||||||||||||||| |||| |||||||  ||| |
Sbjct: 933  ggtgctgttctcgctggccgtggacggcgaggccggcgtgaggaaggtgctgcagatgct 992

                                                      
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcac 102
             || || ||| | |||||||||||||||||| |||| |||||
Sbjct: 993  ccgcgacgagctggagctcaccatggcgctcagcggatgcac 1034
to top
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
             |||| ||||| ||||||| | ||| ||||||||||||||| |||| |||||||  ||| |
Sbjct: 59259 ggtgctgttctcgctggccgtggacggcgaggccggcgtgaggaaggtgctgcagatgct 59318

                                                       
Query: 61    gcgggaggagttcgagctcaccatggcgctcggcgggtgcac 102
              || || ||| | |||||||||||||||||| |||| |||||
Sbjct: 59319 ccgcgacgagctggagctcaccatggcgctcagcggatgcac 59360



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                         
Query: 26    ggcgaggccggcgtgcggaacgtgctgcgcatgatgcgggaggagttcgagctcaccatg 85
             ||||||||||||||| |||||| |||||| ||| || | || ||| | ||| ||||||||
Sbjct: 63352 ggcgaggccggcgtgaggaacgcgctgcggatgctgagagacgagctggagatcaccatg 63411

                              
Query: 86    gcgctcggcgggtgcac 102
             |||||| |||| |||||
Sbjct: 63412 gcgctcagcggctgcac 63428
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
                |||| ||||| ||||||| | ||| ||||||||||||||| |||| |||||||  ||| |
Sbjct: 31725989 ggtgctgttctcgctggccgtggacggcgaggccggcgtgaggaaggtgctgcagatgct 31726048

                                                          
Query: 61       gcgggaggagttcgagctcaccatggcgctcggcgggtgcac 102
                 || || ||| | |||||||||||||||||| |||| |||||
Sbjct: 31726049 ccgcgacgagctggagctcaccatggcgctcagcggatgcac 31726090



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                            
Query: 26       ggcgaggccggcgtgcggaacgtgctgcgcatgatgcgggaggagttcgagctcaccatg 85
                ||||||||||||||| |||||| |||||| ||| || | || ||| | ||| ||||||||
Sbjct: 31730082 ggcgaggccggcgtgaggaacgcgctgcggatgctgagagacgagctggagatcaccatg 31730141

                                 
Query: 86       gcgctcggcgggtgcac 102
                |||||| |||| |||||
Sbjct: 31730142 gcgctcagcggctgcac 31730158
to top
>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||| ||||| ||||||| | ||| ||||||||||||||| |||| |||||||  ||| |
Sbjct: 1002 ggtgctgttctcgctggccgtggacggcgaggccggcgtgaggaaggtgctgcagatgct 1061

                                                      
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcac 102
             || || ||| | |||||||||||||||||| |||| |||||
Sbjct: 1062 ccgcgacgagctggagctcaccatggcgctcagcggatgcac 1103
to top
>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtggtgttcgcgctggcggcggagggcgaggccggcgtgcggaacgtgctgcgcatgat 60
            |||| ||||| ||||||| | ||| ||||||||||||||| |||| |||||||  ||| |
Sbjct: 1006 ggtgctgttctcgctggccgtggacggcgaggccggcgtgaggaaggtgctgcagatgct 1065

                                                      
Query: 61   gcgggaggagttcgagctcaccatggcgctcggcgggtgcac 102
             || || ||| | |||||||||||||||||| |||| |||||
Sbjct: 1066 ccgcgacgagctggagctcaccatggcgctcagcggatgcac 1107
to top
>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 26   ggcgaggccggcgtgcggaacgtgctgcgcatgatgcgggaggagttcgagctcaccatg 85
            ||||||||||||||| |||||| |||||| ||| || | || ||| | ||| ||||||||
Sbjct: 1545 ggcgaggccggcgtgaggaacgcgctgcggatgctgagagacgagctggagatcaccatg 1604

                             
Query: 86   gcgctcggcgggtgcac 102
            |||||| |||| |||||
Sbjct: 1605 gcgctcagcggctgcac 1621
to top
>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 65   gaggagttcgagctcaccatggc 87
            |||||||||||||||||||||||
Sbjct: 1093 gaggagttcgagctcaccatggc 1115
to top
>gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177267

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 522   tttggatactggtattatctgg 543
             ||||||||||||||||||||||
Sbjct: 22883 tttggatactggtattatctgg 22904
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 144    gcgaccgcctcggacgcccgct 165
              ||||||||||||||||||||||
Sbjct: 277800 gcgaccgcctcggacgcccgct 277779



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     ctcggacgcccgctgccgag 171
               ||||||||||||||||||||
Sbjct: 5814697 ctcggacgcccgctgccgag 5814716
to top
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    gctggcggcggagggcgaggc 33
             |||||||||||||||||||||
Sbjct: 34659 gctggcggcggagggcgaggc 34679
to top
>emb|CR619043.1| full-length cDNA clone CS0DF028YK10 of Fetal brain of Homo sapiens
           (human)
          Length = 1491

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  gctggcggcggagggcgaggc 33
           |||||||||||||||||||||
Sbjct: 610 gctggcggcggagggcgaggc 590
to top
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     gctggcggcggagggcgaggc 33
              |||||||||||||||||||||
Sbjct: 135983 gctggcggcggagggcgaggc 136003
to top
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 50      ctgcgcatgatgcgggaggagttcg 74
               |||||||||||||||||||| ||||
Sbjct: 2682551 ctgcgcatgatgcgggaggatttcg 2682575
to top
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 41     cggaacgtgctgcgcatgatgcgggagg 68
              ||||| |||| |||||||||||||||||
Sbjct: 284056 cggaaagtgcagcgcatgatgcgggagg 284029
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      tggcggcggagggcgaggcc 34
               ||||||||||||||||||||
Sbjct: 2892777 tggcggcggagggcgaggcc 2892758
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 9       tcgcgctggcggcggagggc 28
               ||||||||||||||||||||
Sbjct: 1499854 tcgcgctggcggcggagggc 1499835
to top
>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence
          Length = 148711

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tcgcgctggcggcggagggc 28
             ||||||||||||||||||||
Sbjct: 74066 tcgcgctggcggcggagggc 74047
to top
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 399   tctcgccatttccaccatatttcgcacc 426
             |||| |||||||||||| ||||||||||
Sbjct: 29956 tctctccatttccaccaaatttcgcacc 29983
to top
>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 106  gctcagcgacatcacccgcgaacacatc 133
            ||||||||||| ||||||||| ||||||
Sbjct: 1024 gctcagcgacaccacccgcgagcacatc 1051
to top
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 399    tctcgccatttccaccatatttcgcacc 426
              |||| |||||||||||| ||||||||||
Sbjct: 158415 tctctccatttccaccaaatttcgcacc 158442
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 106    gctcagcgacatcacccgcgaacacatc 133
              ||||||||||| ||||||||| ||||||
Sbjct: 766298 gctcagcgacaccacccgcgagcacatc 766325
to top
>ref|XM_821817.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 Hsc70-interacting
           protein (Tb927.3.5340) partial mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   tcgcgctggcggcggagggc 28
           ||||||||||||||||||||
Sbjct: 719 tcgcgctggcggcggagggc 700
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ggtgttcgcgctggcggcgg 23
             ||||||||||||||||||||
Sbjct: 68001 ggtgttcgcgctggcggcgg 67982
to top
>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   cgcaacgcaacgcaacgcac 276
             ||||||||||||||||||||
Sbjct: 42560 cgcaacgcaacgcaacgcac 42541
to top
>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete
              sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    accatattgtatttccatgt 452
              ||||||||||||||||||||
Sbjct: 166688 accatattgtatttccatgt 166707
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 106     gctcagcgacatcacccgcgaacacatc 133
               ||||||||||| ||||||||| ||||||
Sbjct: 4277355 gctcagcgacaccacccgcgagcacatc 4277328
to top
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   cgcaacgcaacgcaacgcac 276
             ||||||||||||||||||||
Sbjct: 26540 cgcaacgcaacgcaacgcac 26559
to top
>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 106  gctcagcgacatcacccgcgaacacatc 133
            ||||||||||| ||||||||| ||||||
Sbjct: 3617 gctcagcgacaccacccgcgagcacatc 3644
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 483      attctgtatttatcatacat 502
                ||||||||||||||||||||
Sbjct: 22849562 attctgtatttatcatacat 22849581
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 399      tctcgccatttccaccatatttcgcacc 426
                |||| |||||||||||| ||||||||||
Sbjct: 17868764 tctctccatttccaccaaatttcgcacc 17868791
to top
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   cgcaacgcaacgcaacgcac 276
             ||||||||||||||||||||
Sbjct: 77484 cgcaacgcaacgcaacgcac 77465
to top
>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence
          Length = 175020

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    tggcggcggagggcgaggccggcg 38
             ||||||||||||||| ||||||||
Sbjct: 90881 tggcggcggagggcggggccggcg 90904
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 15      tggcggcggagggcgaggcc 34
               ||||||||||||||||||||
Sbjct: 1654004 tggcggcggagggcgaggcc 1654023
to top
>gb|AY789624.1| Coix lacryma-jobi voucher PI320865 USDA FL gene, partial cds
          Length = 1036

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  ctggcggcggagggcgaggccggc 37
           ||||||||||||||||||| ||||
Sbjct: 721 ctggcggcggagggcgagggcggc 744
to top
>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 cgcaacgcaacgcaacgcac 276
           ||||||||||||||||||||
Sbjct: 878 cgcaacgcaacgcaacgcac 859
to top
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  cgcaacgcaacgcaacgcac 276
            ||||||||||||||||||||
Sbjct: 5008 cgcaacgcaacgcaacgcac 5027
to top
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    cgcaacgcaacgcaacgcac 276
              ||||||||||||||||||||
Sbjct: 111024 cgcaacgcaacgcaacgcac 111005
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 106     gctcagcgacatcacccgcgaacacatc 133
               ||||||||||| ||||||||| ||||||
Sbjct: 4284145 gctcagcgacaccacccgcgagcacatc 4284118
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       ggtggtgttcgcgctggcgg 20
               ||||||||||||||||||||
Sbjct: 3258305 ggtggtgttcgcgctggcgg 3258324
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 399      tctcgccatttccaccatatttcgcacc 426
                |||| |||||||||||| ||||||||||
Sbjct: 17963081 tctctccatttccaccaaatttcgcacc 17963108
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 483      attctgtatttatcatacat 502
                ||||||||||||||||||||
Sbjct: 22777753 attctgtatttatcatacat 22777772
to top
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    attctgtatttatcatacat 502
              ||||||||||||||||||||
Sbjct: 107282 attctgtatttatcatacat 107263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,205,347
Number of Sequences: 3902068
Number of extensions: 3205347
Number of successful extensions: 59364
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58175
Number of HSP's gapped (non-prelim): 1170
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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